# terms

id: PBO:0045168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 2","termid":"PBO:0045168"}


id: MONDO:0003573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant epithelial neoplasm composed of cells with significant cytologic atypia and nuclear pleomorphism.","definition_xrefs":["NCIT:C4094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleomorphic carcinoma","secondary_identifiers":["MEDGEN:87198","ICDO:8022/3","DOID:5662","icd11.foundation:1381572140","UMLS:C0334233"],"synonyms":[{"name":"pleomorphic carcinoma","type":"exact"},{"name":"pleomorphic carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003573","xrefs":{"Monarch":{"xref_id":"0003573"}}}


id: GO:0140832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + L-histidine(out) + Na+(out) = H+(out) + L-histidine(in) + Na+(in).","definition_xrefs":["PMID:10619430","PMID:11742981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine transmembrane transporter activity","termid":"GO:0005290"},{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"},{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-histidine, sodium:proton antiporter activity","secondary_identifiers":["RHEA:71135"],"termid":"GO:0140832"}


id: GO:0015011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an enzyme cofactor consisting of a tetrapyrrole structure containing nickel, such as the F-430 cofactor found in methyl-coenzyme M reductase.","definition_xrefs":["Wikipedia:Cofactor_F430","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"nickel-tetrapyrrole coenzyme metabolic process","synonyms":[{"name":"coenzyme F430 metabolic process","type":"narrow"},{"name":"nickel-tetrapyrrole coenzyme metabolism","type":"exact"}],"termid":"GO:0015011"}


id: PBO:0038480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 5","termid":"PBO:0038480"}


id: GO:0016159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-muconolactone = (4,5-dihydro-5-oxofuran-2-yl)-acetate.","definition_xrefs":["RHEA:12348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"muconolactone delta-isomerase activity","secondary_identifiers":["EC:5.3.3.4","MetaCyc:MUCONOLACTONE-DELTA-ISOMERASE-RXN"],"synonyms":[{"name":"5-oxo-4,5-dihydrofuran-2-acetate delta3-delta2-isomerase activity","type":"related"},{"name":"muconolactone D-isomerase activity","type":"exact"},{"name":"muconolactone isomerase activity","type":"related"}],"termid":"GO:0016159"}


id: PBO:0041527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 89","termid":"PBO:0041527"}


id: GO:1901112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of actinorhodin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"actinorhodin metabolic process","termid":"GO:1901110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"actinorhodin biosynthetic process","synonyms":[{"name":"actinorhodin anabolism","type":"exact"},{"name":"actinorhodin biosynthesis","type":"exact"},{"name":"actinorhodin formation","type":"exact"},{"name":"actinorhodin synthesis","type":"exact"}],"termid":"GO:1901112"}


id: PR:O94550
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prohibitin-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04636","PRO:DNx","PANTHER:PTHR23222:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.16","secondary_identifiers":["UniProtKB:O94550"],"synonyms":[{"name":"Spom972h-PHB2","type":"exact"}],"termid":"PR:O94550"}


id: PBO:0116728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRB antisense RNA 1","termid":"PBO:0116728"}


id: PBO:0075197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 9","termid":"PBO:0075197"}


id: GO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B-1 B cell differentiation. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"regulates","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B-1 B cell differentiation","synonyms":[{"name":"regulation of B-1 B cell development","type":"related"},{"name":"regulation of B-1 B lymphocyte differentiation","type":"exact"},{"name":"regulation of B-1 B-cell differentiation","type":"exact"},{"name":"regulation of B-1 B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0001924"}


id: SO:1000158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the insertion is in cytologically inverted orientation with respect to its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"inversion_cum_translocation","termid":"SO:1000148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)iTp","type":"related"},{"name":"inverted intrachromosomal transposition","type":"exact"}],"termid":"SO:1000158"}


id: GO:0061988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chromosome organization process in which meiotic chromosomes in the germ cell nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:19696886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"karyosome formation","termid":"GO:0061988"}


id: SO:1000070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant affects the way in which the primary transcriptional product is processed to form the mature transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000070 sequence_variant_affecting_transcript_processing (obsolete SO:1000070)","synonyms":[{"name":"mutation affecting transcript processing","type":"related"},{"name":"sequence variant affecting transcript processing","type":"exact"}],"termid":"SO:1000070"}


id: PBO:0052171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 2","termid":"PBO:0052171"}


id: PBO:0016568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85a (predicted)","termid":"PBO:0016568"}


id: PBO:0066373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD52 motif containing 1","termid":"PBO:0066373"}


id: PBO:0083212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF URA7; identified by expression profiling and mass spectrometry","termid":"PBO:0083212"}


id: MONDO:0008594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, skin tumor disorder characterized by childhood-onset of multiple, benign, asymptomatic, white to flesh-colored papules predominantly located on the face, ears, neck and trunk, not associated with systemic organ involvement, associated malignancies or FLCN gene locus mutation.","definition_xrefs":["Orphanet:538756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial multiple discoid fibromas","secondary_identifiers":["MESH:C536847","MEDGEN:348201","GARD:8479","UMLS:C1860850","OMIM:190340"],"synonyms":[{"name":"FMDF","type":"exact"},{"name":"discoid fibromas, familial multiple","type":"related"},{"name":"familial multiple trichodiscomas","type":"related"},{"name":"hereditary multiple trichodiscomas","type":"related"},{"name":"small benign fibrovascular tumor of the dermal part of the hair disk","type":"related"},{"name":"small benign fibrovascular tumour of the dermal part of the hair disc","type":"related"},{"name":"trichodiscomas, familial multiple","type":"related"}],"termid":"MONDO:0008594","xrefs":{"Monarch":{"xref_id":"0008594"}}}


id: PBO:0090021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase complex subunit Naa35","termid":"PBO:0090021"}


id: FYPO:0007990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize isoleucine, and therefore requires isoleucine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mlr","PMID:35325114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for isoleucine","synonyms":[{"name":"growth auxotrophic for isoleucine during mitotic cell cycle","type":"exact"},{"name":"growth auxotrophic for isoleucine during vegetative growth","type":"exact"},{"name":"isoleucine auxotrophy","type":"exact"}],"termid":"FYPO:0007990"}


id: PBO:0056976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 29a","termid":"PBO:0056976"}


id: GO:1903767
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of sweet taste receptor activity.","definition_xrefs":["GO_REF:0000088","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:16720576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor complex","termid":"GO:1903768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sweet taste receptor complex","termid":"GO:1903767"}


id: PBO:0116708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily H member 1 pseudogene (gene/pseudogene)","termid":"PBO:0116708"}


id: GO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to self antigen","synonyms":[{"name":"down regulation of tolerance induction to self antigen","type":"exact"},{"name":"down-regulation of tolerance induction to self antigen","type":"exact"},{"name":"downregulation of tolerance induction to self antigen","type":"exact"},{"name":"inhibition of tolerance induction to self antigen","type":"narrow"}],"termid":"GO:0002650"}


id: PBO:0052351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 4A","termid":"PBO:0052351"}


id: PBO:0040595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated agonist of cell death","termid":"PBO:0040595"}


id: PBO:0070692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 1","termid":"PBO:0070692"}


id: PBO:0074651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 40B","termid":"PBO:0074651"}


id: MONDO:0001834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the neural pathway from the optic nerve to the visual cortex.","definition_xrefs":["NCIT:C35342"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"vision disorder","termid":"MONDO:0021084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visual pathway disorder","secondary_identifiers":["MEDGEN:57831","UMLS:C0155287","DOID:1393","ICD10CM:H47.9","SCTID:54767005","SCTID:95776004"],"synonyms":[{"name":"disease of optic tract","type":"exact"},{"name":"disease or disorder of optic tract","type":"exact"},{"name":"disorder of optic tract","type":"exact"},{"name":"optic tract disease","type":"exact"},{"name":"optic tract disease or disorder","type":"exact"},{"name":"optic tract disorder","type":"related"},{"name":"visual pathway disorder","type":"exact"}],"termid":"MONDO:0001834","xrefs":{"Monarch":{"xref_id":"0001834"}}}


id: PBO:0026863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abolished_mitotic_sister_chromatid_separation,_with_mononucleate_and_anucleate_compartment_formation","termid":"PBO:0026863"}


id: FYPO:0002147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable. The population may be mixed with respect to other phenotypes (e.g. whether cell division occurs).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination (obsolete FYPO:0002147)","synonyms":[{"name":"cell population inviable after spore germination","type":"exact"},{"name":"inviable germinated spore population","type":"exact"},{"name":"population of inviable germinated spores","type":"exact"}],"termid":"FYPO:0002147"}


id: GO:0071023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that forms during the addition of a specific spliced leader (SL) sequence to the 5'-end of a messenger RNA primary transcript, a process which occurs in a number of eukaryotic organisms, including trypanosomatid protozoans, euglenoids, nematodes, trematodes, and chordates.","definition_xrefs":["ISBN:0879697393","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"trans spliceosomal complex","termid":"GO:0071023"}


id: PR:O74963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nca2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear control of ATPase protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.02c","synonyms":[{"name":"Spom972h-nca2","type":"exact"}],"termid":"PR:O74963"}


id: PBO:0078019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 9","termid":"PBO:0078019"}


id: FYPO:0005965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of lithium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lithium import","termid":"FYPO:0005964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased lithium import","synonyms":[{"name":"decreased cellular lithium import","type":"exact"},{"name":"decreased lithium import during mitotic cell cycle","type":"related"},{"name":"decreased lithium import during vegetative growth","type":"exact"},{"name":"decreased lithium import into cell","type":"exact"},{"name":"decreased lithium ion import","type":"exact"},{"name":"reduced lithium import","type":"exact"}],"termid":"FYPO:0005965"}


id: RO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c connects a if and only if there exist some b such that a and b are similar parts of the same system, and c connects b, specifically, c connects a with b. When one structure connects two others it unites some aspect of the function or role they play within the system.","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connects","termid":"RO:0002176"}


id: PBO:0074808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13 pseudogene 3","termid":"PBO:0074808"}


id: MONDO:0043512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalopathy resulting from trauma.","definition_xrefs":["NCIT:C35542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traumatic encephalopathy","secondary_identifiers":["icd11.foundation:1673722101","MEDGEN:536661","SCTID:230282000","UMLS:C0236959"],"synonyms":[{"name":"dementia due to head trauma","type":"narrow"},{"name":"post-traumatic brain syndrome","type":"narrow"},{"name":"post-traumatic dementia","type":"narrow"},{"name":"traumatic encephalopathy","type":"exact"}],"termid":"MONDO:0043512","xrefs":{"Monarch":{"xref_id":"0043512"}}}


id: PBO:0031526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031526"}


id: PBO:0094356
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"community_curated","termid":"PBO:0094356"}


id: GO:2000168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in neural tube closure.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in neural tube closure (obsolete GO:2000168)","termid":"GO:2000168"}


id: PBO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1 (predicted)","termid":"PBO:0005136"}


id: PBO:0065258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23B","termid":"PBO:0065258"}


id: MONDO:0011303
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85423],"is_not":false,"summary":null,"term":"MONDO:0011303"}]},"cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the ACTN4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"},{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4551527","DOID:0111128","GARD:15353","MEDGEN:1636833","OMIM:603278","MESH:C538457","Orphanet:93213"],"synonyms":[{"name":"ACTN4 focal segmental glomerulosclerosis","type":"exact"},{"name":"FSGS1","type":"exact"},{"name":"familial idiopathic steroid-resistant nephrotic syndrome with focal segmental glomerulosclerosis","type":"exact"},{"name":"familial idiopathic steroid-resistant nephrotic syndrome with focal segmental hyalinosis","type":"related"},{"name":"focal segmental glomerulosclerosis 1","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in ACTN4","type":"exact"},{"name":"focal segmental glomerulosclerosis type 1","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 1","type":"related"}],"termid":"MONDO:0011303","terms_by_termid":{"MONDO:0011303":null},"xrefs":{"Monarch":{"xref_id":"0011303"}}}


id: PBO:0047223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 227 member A","termid":"PBO:0047223"}


id: PATO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000486 moderate response (obsolete PATO:0000486)","termid":"PATO:0000486"}


id: PBO:0049485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1-8 pseudogene 1","termid":"PBO:0049485"}


id: GO:0160089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A protein adaptor that recognizes and binds an RNA molecule modified by N(7)-methylguanine (m7G), a modification present at internal sites of mRNAs and some non-coding RNAs.","definition_xrefs":["PMID:37379838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"internal N(7)-methylguanine-containing RNA reader activity","termid":"GO:0160089"}


id: GO:0052156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the T-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host T-cell mediated immune response","secondary_identifiers":["GO:0052295"],"synonyms":[{"name":"modulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host T-cell mediated immune response","type":"exact"},{"name":"perturbation of host T-cell mediated immune response","type":"exact"},{"name":"symbiont-mediated modulation of host cell-mediated immune response","type":"exact"},{"name":"symbiont-mediated perturbation of host cell-mediated immune response","type":"exact"}],"termid":"GO:0052156"}


id: MONDO:0029131
data:
  {"annotated_genes":["SJAG_04656","SJAG_04472"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86676,86677],"is_not":false,"summary":null,"term":"MONDO:0029131"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04472":null,"SJAG_04656":null},"genotype_count":0,"is_obsolete":false,"name":"peripheral neuropathy, autosomal recessive, with or without impaired intellectual development","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618124","UMLS:C4748283","MEDGEN:1648480"],"synonyms":[{"name":"PNRIID","type":"related"},{"name":"peripheral neuropathy, autosomal recessive, with or without impaired intellectual development","type":"exact"}],"termid":"MONDO:0029131","terms_by_termid":{"MONDO:0029131":null},"xrefs":{"Monarch":{"xref_id":"0029131"}}}


id: PBO:0073540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing ring finger 2","termid":"PBO:0073540"}


id: PBO:0057718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-3","termid":"PBO:0057718"}


id: GO:0005562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA (obsolete GO:0005562)","synonyms":[{"name":"RNA","type":"exact"}],"termid":"GO:0005562"}


id: PBO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCD2 pseudogene 2","termid":"PBO:0047280"}


id: MONDO:0009047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The failure of one or both testes of a male fetus to descend from the abdomen into the scrotum during the late part of pregnancy. If not surgically corrected in early childhood, males may be at increased risk for testicular cancer later in life.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism","secondary_identifiers":["MESH:D003456","MEDGEN:8192","UMLS:C0010417","HP:0000028","NCIT:C12326","DOID:11383","ICD9:752.5","OMIM:219050","EFO:0004562","ICD9:752.51","icd11.foundation:1134950387","SCTID:204878001"],"synonyms":[{"name":"cryptorchidism","type":"exact"},{"name":"cryptorchidism (disease)","type":"exact"},{"name":"cryptorchidism, unilateral or bilateral","type":"related"},{"name":"cryptorchism","type":"exact"},{"name":"undescended testes","type":"exact"},{"name":"undescended testicle","type":"exact"},{"name":"undescended testicles","type":"exact"},{"name":"undescended testis","type":"exact"}],"termid":"MONDO:0009047","xrefs":{"Monarch":{"xref_id":"0009047"}}}


id: PR:Q09731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bun107 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBP9-binding protein bun107 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.14","synonyms":[{"name":"Spom972h-bun107","type":"exact"},{"name":"binding ubp9 protein of 107 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09731"}


id: PBO:0084097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Ria1p; essential protein involved in ribosome maturation; with Ria1p, promotes release of Tif6p from 60S ribosomal subunits in the cytoplasm so that they can assemble with 40S subunits to generate mature ribosomes; ortholog of the human protein (SBDS) responsible for autosomal recessive Shwachman-Bodian-Diamond Syndrome; highly conserved across archaea and eukaryotes","termid":"PBO:0084097"}


id: GO:0045870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retroviral genome replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral genome replication","termid":"GO:0045070"},{"relation_name":"is_a","term_name":"regulation of single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0045091"},{"relation_name":"is_a","term_name":"positive regulation of RNA biosynthetic process","termid":"GO:1902680"},{"relation_name":"positively_regulates","term_name":"single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0039692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single stranded viral RNA replication via double stranded DNA intermediate","synonyms":[{"name":"activation of retroviral genome replication","type":"narrow"},{"name":"positive regulation of retroviral genome replication","type":"exact"},{"name":"stimulation of retroviral genome replication","type":"narrow"},{"name":"up regulation of retroviral genome replication","type":"exact"},{"name":"up-regulation of retroviral genome replication","type":"exact"},{"name":"upregulation of retroviral genome replication","type":"exact"}],"termid":"GO:0045870"}


id: GO:0018180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a sulfur group from a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein desulfurization (obsolete GO:0018180)","synonyms":[{"name":"protein amino acid desulfurisation","type":"exact"},{"name":"protein amino acid desulfurization","type":"exact"},{"name":"protein amino acid desulphurisation","type":"exact"},{"name":"protein amino acid desulphurization","type":"exact"}],"termid":"GO:0018180"}


id: GO:0141083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the host signal transduction pathways leading to the production of reactive oxygen species as part of the host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:31375544","PMID:27473656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host reactive oxygen species generation","synonyms":[{"name":"inhibition by organism of defense-related host active oxygen species production","type":"exact"}],"termid":"GO:0141083"}


id: PBO:0055399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2829","termid":"PBO:0055399"}


id: PBO:0069450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 715, pseudogene","termid":"PBO:0069450"}


id: MONDO:0023267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goldstein hutt syndrome","secondary_identifiers":["MEDGEN:419084","UMLS:C2931465","MESH:C537282"],"synonyms":[{"name":"long eyelashes, cataract, and hereditary spherocytosis","type":"related"},{"name":"trichomegaly, cataract, and hereditary spherocytosis","type":"related"}],"termid":"MONDO:0023267","xrefs":{"Monarch":{"xref_id":"0023267"}}}


id: PBO:0073001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 2","termid":"PBO:0073001"}


id: PBO:0090418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex kleisin subunit Rec8","termid":"PBO:0090418"}


id: GO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an myocardial progenitor cell that contributes to the formation of the heart rudiment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"},{"relation_name":"part_of","term_name":"heart rudiment formation","termid":"GO:0003315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of myocardial progenitor cell apical/basal polarity","synonyms":[{"name":"myocardial progenitor epithelial polarization","type":"exact"}],"termid":"GO:0003316"}


id: GO:0071720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of prostaglandins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin transport","termid":"GO:0015732"},{"relation_name":"is_a","term_name":"sodium-independent icosanoid transport","termid":"GO:0071718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sodium-independent prostaglandin transport","termid":"GO:0071720"}


id: MONDO:0010281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal glycogen storage disease characterized by severe cardiomyopathy and variable degrees of muscle weakness, frequently associated with intellectual deficit.","definition_xrefs":["Orphanet:34587"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"glycogen storage disease II","termid":"MONDO:0009290"},{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular glycogenosis (obsolete MONDO:0016118)","termid":"MONDO:0016118"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"lysosomal glycogen storage disease","termid":"MONDO:0017738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"Danon disease","secondary_identifiers":["NCIT:C84735","MESH:D052120","GARD:9730","EFO:1001333","ICD9:759.89","MEDGEN:209235","NORD:1033","NANDO:1200222","OMIM:300257","icd11.foundation:1233188442","SCTID:419097006","NANDO:1200145","DOID:0050437","UMLS:C0878677"],"synonyms":[{"name":"ANTOPOL disease","type":"exact"},{"name":"Antopol disease","type":"related"},{"name":"Danon disease","type":"exact"},{"name":"Danon disease, X-linked dominant","type":"exact"},{"name":"GSD IIb","type":"related"},{"name":"GSD IIb, formerly","type":"related"},{"name":"GSD due to LAMP-2 deficiency","type":"exact"},{"name":"GSD2B (formerly)","type":"related"},{"name":"LAMP2 lysosomal glycogen storage disease","type":"exact"},{"name":"X-linked vacuolar cardiomyopathy and myopathy","type":"related"},{"name":"glycogen storage cardiomyopathy","type":"related"},{"name":"glycogen storage disease IIb","type":"related"},{"name":"glycogen storage disease due to LAMP-2 deficiency","type":"related"},{"name":"glycogen storage disease limited to the heart","type":"related"},{"name":"glycogen storage disease type 2b (formerly)","type":"related"},{"name":"glycogen storage disease type IIb","type":"exact"},{"name":"glycogenosis due to LAMP-2 deficiency","type":"exact"},{"name":"lysosomal glycogen storage disease caused by mutation in LAMP2","type":"exact"},{"name":"lysosomal glycogen storage disease with normal acid maltase activity","type":"exact"},{"name":"lysosomal glycogen storage disease without acid maltase deficiency","type":"related"},{"name":"lysosomal glycogen storage disease without acid maltase deficiency (formerly)","type":"related"},{"name":"lysosomal glycogen storage disease without acid maltase deficiency, formerly","type":"related"},{"name":"pseudoglycogenosis 2","type":"related"},{"name":"pseudoglycogenosis II","type":"exact"},{"name":"vacuolar cardiomyopathy and myopathy X-linked","type":"related"},{"name":"vacuolar cardiomyopathy and myopathy, X-linked","type":"related"}],"termid":"MONDO:0010281","xrefs":{"Monarch":{"xref_id":"0010281"}}}


id: PBO:0013827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pho85 family Psl1 (predicted)","termid":"PBO:0013827"}


id: PBO:0017702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase Npt1 (predicted)","termid":"PBO:0017702"}


id: PBO:0075472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 22","termid":"PBO:0075472"}


id: MONDO:0700098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm, non-human animal","termid":"MONDO:0700098","xrefs":{"Monarch":{"xref_id":"0700098"}}}


id: MONDO:0021055
data:
  {"annotated_genes":["SJAG_01419","SJAG_02261","SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012041"},{"annotations":[85561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014630"},{"annotations":[87449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"Familial adenomatous polyposis (FAP) is characterized by the development of hundreds to thousands of adenomas in the rectum and colon during the second decade of life.","definition_xrefs":["Orphanet:733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic or attenuated familial adenomatous polyposis","termid":"MONDO:0021057"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"is_obsolete":false,"name":"classic familial adenomatous polyposis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10056981","OMIMPS:175100","NCIT:C3339","SCTID:72900001","DECIPHER:49","DOID:0050424","GARD:6408","ICDO:8220/0","MEDGEN:46010","NANDO:2200915","UMLS:C0032580","NORD:1121"],"synonyms":[{"name":"APC - adenomatous polyposis coli","type":"exact"},{"name":"FAP","type":"exact"},{"name":"FPC","type":"related"},{"name":"Familial Adenomatous Polyposis","type":"exact"},{"name":"adenomatous polyposis coli","type":"exact"},{"name":"adenomatous polyposis of the colon","type":"exact"},{"name":"classic FAP","type":"exact"},{"name":"classic familial adenomatous polyposis","type":"exact"},{"name":"colorectal adenomatous polyposis","type":"exact"},{"name":"familial adenomatous polyposis","type":"exact"},{"name":"familial adenomatous polyposis coli","type":"exact"},{"name":"familial adenomatous polyposis of the colon","type":"related"},{"name":"familial adenomatous polyposis syndrome","type":"exact"},{"name":"familial multiple polyposis","type":"related"},{"name":"familial polyposis","type":"exact"},{"name":"familial polyposis coli","type":"exact"},{"name":"hereditary adenomatous polyposis coli","type":"exact"},{"name":"hereditary polyposis coli","type":"related"},{"name":"polyposis coli","type":"exact"}],"termid":"MONDO:0021055","terms_by_termid":{"MONDO:0012041":null,"MONDO:0014630":null,"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0021055"}}}


id: PBO:0109080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3104","termid":"PBO:0109080"}


id: PR:Q9P7J6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1702 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S17-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.09","synonyms":[{"name":"Spom972h-rps1702","type":"exact"}],"termid":"PR:Q9P7J6"}


id: PBO:0089053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb3","termid":"PBO:0089053"}


id: PBO:0082969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that inhibits Gdb1p glycogen debranching activity; required for normal intracellular accumulation of glycogen; phosphorylated in vivo; expression increases during wine fermentation; protein abundance increases in response to DNA replication stress; IGD1 has a paralog, YOL024W, that arose from the whole genome duplication","termid":"PBO:0082969"}


id: MONDO:0023609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"le Marec-Bracq-Picaud syndrome","secondary_identifiers":["UMLS:C2931385","MESH:C536997","MEDGEN:444043"],"synonyms":[{"name":"complex malformation syndrome with brachymesomelia","type":"related"}],"termid":"MONDO:0023609","xrefs":{"Monarch":{"xref_id":"0023609"}}}


id: PBO:0079890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPP2 intronic transcript 1","termid":"PBO:0079890"}


id: GO:0043287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a poly(3-hydroxyalkanoate), a polyester of 3-hydroxyacids produced as intracellular granules by a large variety of bacteria.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"poly(3-hydroxyalkanoate) binding","synonyms":[{"name":"PHA binding","type":"exact"}],"termid":"GO:0043287"}


id: MONDO:0016034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cleft lip with or without cleft palate (obsolete MONDO:0016034)","secondary_identifiers":["Orphanet:1991"],"synonyms":[{"name":"Tessier cleft number 1,2","type":"exact"}],"termid":"MONDO:0016034","xrefs":{"Monarch":{"xref_id":"0016034"}}}


id: PBO:0045975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain containing 1","termid":"PBO:0045975"}


id: GO:0008081
data:
  {"annotated_genes":["SJAG_00622","SJAG_04418","SJAG_01219","SJAG_00956","SJAG_01519","SJAG_03665","SJAG_01428","SJAG_02161","SJAG_02481","SJAG_02298","SJAG_00321","SJAG_03994","SJAG_01860"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80241],"is_not":false,"summary":null,"term":"GO:0008081"},{"annotations":[101378,90970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004113"},{"annotations":[79261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004115"},{"annotations":[79263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047555"},{"annotations":[79621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017005"},{"annotations":[71910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047389"},{"annotations":[93859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062050"},{"annotations":[109147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[98093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[73127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[110280,67564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004528"},{"annotations":[74673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[63264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group.","definition_xrefs":["EC:3.1.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric ester hydrolase activity","termid":"GO:0042578"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_00622":null,"SJAG_00956":null,"SJAG_01219":null,"SJAG_01428":null,"SJAG_01519":null,"SJAG_01860":null,"SJAG_02161":null,"SJAG_02298":null,"SJAG_02481":null,"SJAG_03665":null,"SJAG_03994":null,"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphoric diester hydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016792","Reactome:R-HSA-5693578","GO:0004434"],"synonyms":[{"name":"phosphodiesterase","type":"narrow"}],"termid":"GO:0008081","terms_by_termid":{"GO:0004113":null,"GO:0004115":null,"GO:0004435":null,"GO:0004528":null,"GO:0004630":null,"GO:0004767":null,"GO:0008081":null,"GO:0017005":null,"GO:0034479":null,"GO:0047389":null,"GO:0047555":null,"GO:0052714":null,"GO:0062050":null}}


id: GO:0010342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The separation of the multi-nucleate endosperm into individual cells. In many plant species, the endosperm that nurtures the embryo in the seed initially develops as a syncytium. This syncytial phase ends with simultaneous partitioning of the multi-nucleate cytoplasm into individual cells, a process referred to as cellularization.","definition_xrefs":["PMID:12421698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosperm cellularization","synonyms":[{"name":"cellularization of endosperm","type":"exact"}],"termid":"GO:0010342"}


id: MONDO:1011567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurofibromatosis that occurs in teleost fishes.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis, non-human animal","termid":"MONDO:1011437"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromatosis, teleost fishes","secondary_identifiers":["OMIA:000716-32443"],"termid":"MONDO:1011567","xrefs":{"Monarch":{"xref_id":"1011567"}}}


id: GO:0070991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a medium-chain trans-(2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:14477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"medium-chain fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-11734","EC:1.3.8.7"],"synonyms":[{"name":"MCAD activity","type":"exact"}],"termid":"GO:0070991"}


id: MONDO:1012146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, domestic cat","secondary_identifiers":["OMIA:000621-9685"],"termid":"MONDO:1012146","xrefs":{"Monarch":{"xref_id":"1012146"}}}


id: PBO:0064888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2R2B intronic transcript 1","termid":"PBO:0064888"}


id: PBO:0036262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Rna14","termid":"PBO:0036262"}


id: PBO:0086915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc cluster protein, predicted to be a transcription factor; not an essential gene; EDS1 has a paralog, RGT1, that arose from the whole genome duplication","termid":"PBO:0086915"}


id: GO:0140396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: (1'S,5'S)-hydroxyaverantin + NAD+ = 5'-oxoaverantin + NADH.","definition_xrefs":["PMID:14602595","EC:1.1.1.352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"5'-hydroxyaverantin dehydrogenase activity","secondary_identifiers":["RHEA:35475"],"termid":"GO:0140396"}


id: GO:0004633
data:
  {"annotated_genes":["SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89701],"is_not":false,"summary":null,"term":"GO:0004633"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-[(R)-4-phosphonatopantothenoyl]-L-cysteinate + H+ = CO2 + pantetheine 4'-phosphate.","definition_xrefs":["RHEA:16793","EC:4.1.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphopantothenoylcysteine decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-196840","MetaCyc:P-PANTOCYSDECARB-RXN","KEGG_REACTION:R03269"],"synonyms":[{"name":"4-phosphopantothenoyl-L-cysteine decarboxylase activity","type":"related"},{"name":"4-phosphopantotheoylcysteine decarboxylase activity","type":"related"},{"name":"N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase activity","type":"related"},{"name":"N-[(R)-4'-phosphopantothenoyl]-L-cysteine carboxy-lyase (pantotheine-4'-phosphate-forming)","type":"related"},{"name":"N-[(R)-4'-phosphopantothenoyl]-L-cysteine carboxy-lyase activity","type":"related"},{"name":"PPC-decarboxylase activity","type":"related"}],"termid":"GO:0004633","terms_by_termid":{"GO:0004633":null}}


id: PBO:0002926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Paa1","termid":"PBO:0002926"}


id: PBO:0062466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 157 pseudogene","termid":"PBO:0062466"}


id: PBO:0012551
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae TEM1","termid":"PBO:0012551"}


id: PBO:0034396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inhibits_protease_(obsolete_inhibits_protease)","termid":"PBO:0034396"}


id: PBO:0035766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_gamma-glutamyl-2-aminobutyrate_level","termid":"PBO:0035766"}


id: PBO:0108603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_regulates","termid":"PBO:0108603"}


id: GO:0008744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-xylulose = ADP + L-xylulose 5-phosphate.","definition_xrefs":["EC:2.7.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"L-xylulokinase activity","secondary_identifiers":["MetaCyc:LYXK-RXN","RHEA:18869"],"synonyms":[{"name":"ATP:L-xylulose 5-phosphotransferase activity","type":"related"},{"name":"L-xylulokinase (phosphorylating)","type":"related"},{"name":"L-xylulose kinase activity","type":"related"}],"termid":"GO:0008744"}


id: MONDO:1011861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, non-human animal","secondary_identifiers":["OMIA:001016"],"termid":"MONDO:1011861","xrefs":{"Monarch":{"xref_id":"1011861"}}}


id: PR:Q10412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc58 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.07c","synonyms":[{"name":"RSC complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc58","type":"exact"}],"termid":"PR:Q10412"}


id: FYPO:0002949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount a specific substance measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of substance in cell during G0","synonyms":[{"name":"increased accumulation of substance in cell during G0","type":"related"},{"name":"increased level of substance in cell during cell quiescence","type":"exact"},{"name":"increased level of substance in cell during quiescence","type":"exact"},{"name":"increased substance level during G0","type":"exact"}],"termid":"FYPO:0002949"}


id: GO:0097345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of the apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:pg","PMID:21041309","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability involved in apoptotic process","termid":"GO:1902110"},{"relation_name":"part_of","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810","GO:0007005","GO:0061024"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization","synonyms":[{"name":"MOMP","type":"exact"},{"name":"mitochondrial outer membrane permeabilization during apoptotic cell death","type":"broad"},{"name":"mitochondrion outer membrane permeabilization","type":"exact"}],"termid":"GO:0097345"}


id: GO:0010334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans,trans-farnesyl diphosphate = a sesquiterpene + diphosphate. Sesquiterpenes are terpenes containing three isoprene units, i.e. 15 carbons.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"sesquiterpene synthase activity","termid":"GO:0010334"}


id: MONDO:0850064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited hematologic cancer-predisposing syndrome","secondary_identifiers":["GARD:22461","MEDGEN:1842853","Orphanet:619340","UMLS:C5681832"],"termid":"MONDO:0850064","xrefs":{"Monarch":{"xref_id":"0850064"}}}


id: PBO:0048612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 4","termid":"PBO:0048612"}


id: MOD:01049
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-histidine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated histidine","synonyms":[{"name":"HalHis","type":"exact"}],"termid":"MOD:01049"}


id: GO:1901318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of flagellated sperm motility.","definition_xrefs":["GOC:cilia","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cilium movement","termid":"GO:0003354"},{"relation_name":"is_a","term_name":"regulation of flagellated sperm motility","termid":"GO:1901317"},{"relation_name":"is_a","term_name":"negative regulation of cilium-dependent cell motility","termid":"GO:1902020"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"flagellated sperm motility","termid":"GO:0030317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of flagellated sperm motility","synonyms":[{"name":"down regulation of sperm motility","type":"broad"},{"name":"down regulation of sperm movement","type":"broad"},{"name":"down-regulation of sperm motility","type":"broad"},{"name":"down-regulation of sperm movement","type":"broad"},{"name":"downregulation of sperm motility","type":"broad"},{"name":"downregulation of sperm movement","type":"broad"},{"name":"inhibition of sperm motility","type":"narrow"},{"name":"inhibition of sperm movement","type":"broad"},{"name":"negative regulation of sperm motility","type":"broad"},{"name":"negative regulation of sperm movement","type":"broad"}],"termid":"GO:1901318"}


id: GO:0007576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell aging process that results in the nucleolus breaking down into fragments.","definition_xrefs":["PMID:9271578","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar fragmentation (obsolete GO:0007576)","synonyms":[{"name":"nucleolar size increase","type":"related"}],"termid":"GO:0007576"}


id: GO:0106274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + NAD+ = H+ + (ADP-D-ribosyl)-L-arginyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:19149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein mono-ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"NAD+-protein-arginine ADP-ribosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.2.31-RXN","Reactome:R-HSA-1972385","GO:0003956","GO:0106275","EC:2.4.2.31"],"synonyms":[{"name":"ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD(+):L-arginine ADP-D-ribosyltransferase activity","type":"exact"},{"name":"NAD(P)(+)--arginine ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD(P)+-protein-arginine ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD(P)+:L-arginine ADP-D-ribosyltransferase activity","type":"exact"},{"name":"NAD(P)+:protein-L-arginine ADP-D-ribosyltransferase activity","type":"related"},{"name":"NADP+-protein-arginine ADP-ribosyltransferase activity","type":"broad"},{"name":"mono(ADP-ribosyl)transferase activity","type":"broad"},{"name":"peptidyl-arginine ADP-ribosylation activity","type":"exact"},{"name":"protein-arginine ADP-ribosyltransferase activity","type":"exact"}],"termid":"GO:0106274"}


id: FYPO:0003305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which polar microtubules fail to interdigitate properly, and two partially or completely separated microtubule structures, usually V-shaped, each corresponding to one half of the spindle, are present.","definition_xrefs":["PomBase:mah","PMID:9348288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"output_of","term_name":"abnormal mitotic spindle midzone assembly","termid":"FYPO:0003304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0000631","FYPO:0000054","FYPO:0000337","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"separate mitotic half spindles present","synonyms":[{"name":"broken spindle interzone","type":"related"},{"name":"broken spindle midzone","type":"related"},{"name":"loss of interdigitation between mitotic half spindles","type":"exact"},{"name":"separate half spindles present during mitosis","type":"exact"},{"name":"separate half spindles present during mitotic cell cycle","type":"related"},{"name":"separate mitotic half spindles present during vegetative growth","type":"exact"},{"name":"spindle fraying","type":"related"}],"termid":"FYPO:0003305"}


id: PBO:0052464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 11","termid":"PBO:0052464"}


id: GO:0035561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chromatin binding. Chromatin binding is the selective interaction with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.","definition_xrefs":["PMID:20404130","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin binding (obsolete GO:0035561)","termid":"GO:0035561"}


id: PBO:0018236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid4 (predicted)","termid":"PBO:0018236"}


id: GO:1903627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of dUTP diphosphatase activity.","definition_xrefs":["PMID:1315924","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of dUTP diphosphatase activity (obsolete GO:1903627)","synonyms":[{"name":"regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"regulation of dUTPase activity","type":"exact"},{"name":"regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"}],"termid":"GO:1903627"}


id: PBO:0085914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; YOR019W has a paralog, JIP4, that arose from the whole genome duplication","termid":"PBO:0085914"}


id: PBO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin family","termid":"PBO:0000979"}


id: FYPO:0004397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of protein from the nucleus is normal (i.e. indistinguishable from wild type). Export of all proteins or a specific protein may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear export","termid":"FYPO:0000509"},{"relation_name":"is_a","term_name":"normal intracellular protein transport during vegetative growth","termid":"FYPO:0005397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein export from nucleus during vegetative growth","synonyms":[{"name":"normal nucleocytoplasmic protein export during vegetative growth","type":"related"},{"name":"normal protein export from nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004397"}


id: GO:1903553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular vesicular exosome assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24105262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"regulation of extracellular exosome assembly","termid":"GO:1903551"},{"relation_name":"positively_regulates","term_name":"extracellular exosome assembly","termid":"GO:0071971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of extracellular exosome assembly","synonyms":[{"name":"activation of extracellular vesicular exosome assembly","type":"narrow"},{"name":"positive regulation of extracellular vesicular exosome assembly","type":"related"},{"name":"up regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"up-regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"upregulation of extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:1903553"}


id: MONDO:0013887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 6, autosomal","secondary_identifiers":["OMIM:614779","MEDGEN:766590","UMLS:C3553676"],"synonyms":[{"name":"HTX6","type":"related"},{"name":"heterotaxy, visceral, 6, autosomal","type":"exact"},{"name":"heterotaxy, visceral, 6, autosomal recessive","type":"exact"}],"termid":"MONDO:0013887","xrefs":{"Monarch":{"xref_id":"0013887"}}}


id: GO:0009145
data:
  {"annotated_genes":["SJAG_03925","SJAG_00542","SJAG_MIT37","SJAG_04849","SJAG_05204","SJAG_04122","SJAG_01298","SJAG_04422","SJAG_02598","SJAG_00438","SJAG_03114","SJAG_MIT15","SJAG_07003","SJAG_00133","SJAG_00836","SJAG_02105","SJAG_02887","SJAG_00985","SJAG_02564","SJAG_00885","SJAG_00915","SJAG_MIT09"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102557,64611,75192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[118333],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[108219,93607,108127,116174,119392,119404,119398,109112,95170,103972,105335,89452,93179,103998,94193,102137,103355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[107579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside triphosphate anabolism","type":"exact"},{"name":"purine nucleoside triphosphate biosynthesis","type":"exact"},{"name":"purine nucleoside triphosphate formation","type":"exact"},{"name":"purine nucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009145","terms_by_termid":{"GO:0006183":null,"GO:0009216":null,"GO:0042776":null,"GO:1905707":null}}


id: GO:0039605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Selective and non-covalent interaction of a viral protein with a member of the TFIIB-class of host transcription factors, which contributes to the viral-suppression of assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a host DNA template.","definition_xrefs":["PMID:18768974","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIB-class transcription factor binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter (obsolete GO:0039605)","termid":"GO:0039605"}


id: PBO:0026890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_UV","termid":"PBO:0026890"}


id: GO:0060536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cartilage are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage morphogenesis","termid":"GO:0060536"}


id: PBO:0050723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 9","termid":"PBO:0050723"}


id: PBO:0091730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric lncRNA nam6","termid":"PBO:0091730"}


id: FYPO:0001536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of copper ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular copper level","synonyms":[{"name":"normal cellular copper accumulation","type":"related"},{"name":"normal cellular copper ion level","type":"exact"},{"name":"normal cellular copper level during mitotic cell cycle","type":"related"},{"name":"normal cellular copper level during vegetative growth","type":"exact"}],"termid":"FYPO:0001536"}


id: GO:1902528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein linear polyubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:21931591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein linear polyubiquitination","termid":"GO:0097039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein linear polyubiquitination","synonyms":[{"name":"regulation of M1 linkage","type":"narrow"}],"termid":"GO:1902528"}


id: MONDO:0006912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of gas within the wall of the large or small intestine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pneumatosis cystoides intestinalis","secondary_identifiers":["MESH:D011006","DOID:13249","EFO:1001113","ICD9:569.89","MedDRA:10049732","MEDGEN:18527","SCTID:17465007","UMLS:C0032266"],"termid":"MONDO:0006912","xrefs":{"Monarch":{"xref_id":"0006912"}}}


id: PBO:0074766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 2","termid":"PBO:0074766"}


id: GO:0031941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A two-stranded helical polymer of the protein actin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin filament","termid":"GO:0005884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"filamentous actin","secondary_identifiers":["Wikipedia:Actin"],"synonyms":[{"name":"F-actin","type":"exact"}],"termid":"GO:0031941"}


id: GO:0019701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-arginine on the internal nitrogen-5 (N5) atom (also called delta-nitrogen) to form peptidyl-N5-methyl-L-arginine.","definition_xrefs":["GOC:bf","PMID:9792625","RESID:AA0305"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine N5-methylation (obsolete GO:0019701)","synonyms":[{"name":"peptidyl-arginine delta-N-methylation","type":"exact"}],"termid":"GO:0019701"}


id: PBO:0071959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6","termid":"PBO:0071959"}


id: GO:0005346
data:
  {"annotated_genes":["SJAG_02050","SJAG_00612","SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[101682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[58905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[103176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a purine ribonucleotide, any compound consisting of a purine ribonucleoside (a purine organic base attached to a ribose sugar) esterified with (ortho)phosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transmembrane transporter activity","termid":"GO:0015216"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null,"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"purine ribonucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0005346","terms_by_termid":{"GO:0005471":null,"GO:0046964":null,"GO:0140987":null,"GO:1902557":null}}


id: GO:0070895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transposon integration, a process in which a transposable element is incorporated into another DNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transposon integration (obsolete GO:0070895)","synonyms":[{"name":"down regulation of transposon integration","type":"exact"},{"name":"down-regulation of transposon integration","type":"exact"},{"name":"downregulation of transposon integration","type":"exact"},{"name":"inhibition of transposon integration","type":"narrow"}],"termid":"GO:0070895"}


id: GO:1901075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["PMID:19402756","GO:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis, engulfment","termid":"GO:0060101"},{"relation_name":"is_a","term_name":"regulation of engulfment of apoptotic cell","termid":"GO:1901074"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic cell clearance","termid":"GO:2000426"},{"relation_name":"negatively_regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"negative regulation of engulfment of apoptotic cell","synonyms":[{"name":"down regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down regulation of engulfment of cell corpse","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down-regulation of engulfment of cell corpse","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"downregulation of engulfment of cell corpse","type":"exact"},{"name":"inhibition of engulfment of apoptotic cell","type":"narrow"},{"name":"inhibition of engulfment of apoptotic cell corpse","type":"narrow"},{"name":"inhibition of engulfment of cell corpse","type":"narrow"},{"name":"negative regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"negative regulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901075"}


id: GO:0030619
data:
  {"annotated_genes":["SJAG_05009","SJAG_04911","SJAG_04497","SJAG_03983"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73482,76392,77135,113612],"is_not":false,"summary":null,"term":"GO:0030619"}]},"cv_name":"molecular_function","definition":"Binding to a U1 small nuclear RNA (U1 snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03983":null,"SJAG_04497":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"U1 snRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030619","terms_by_termid":{"GO:0030619":null}}


id: PBO:0053249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 3","termid":"PBO:0053249"}


id: GO:0003040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the molecular signal from an aortic body is relayed to the vasomotor center, causing it to signal an increase arterial pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitation of vasomotor center by chemoreceptor signaling","termid":"GO:0002008"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signaling","termid":"GO:0003028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"excitation of vasomotor center by aortic body chemoreceptor signaling","synonyms":[{"name":"excitation of vasomotor center by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003040"}


id: MONDO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma characterized by a plexiform or multinodular growth pattern. It usually arises from the skin or subcutaneous tissues in the extremities, trunk, and head and neck.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexiform schwannoma","secondary_identifiers":["SCTID:404025004","ICD9:215.9","UMLS:C1370659","MEDGEN:277972","DOID:3206","NCIT:C6969"],"synonyms":[{"name":"plexiform neurilemmoma","type":"exact"},{"name":"plexiform neurinoma","type":"exact"},{"name":"plexiform schwannoma","type":"exact"},{"name":"plexiform schwannoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002559","xrefs":{"Monarch":{"xref_id":"0002559"}}}


id: PBO:0083199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene MMS4","termid":"PBO:0083199"}


id: GO:0006219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyuridine, 2-deoxyribosyluracil, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyuridine metabolic process","termid":"GO:0046096"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside catabolic process","termid":"GO:0046127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxyuridine catabolic process","synonyms":[{"name":"deoxyuridine breakdown","type":"exact"},{"name":"deoxyuridine catabolism","type":"exact"},{"name":"deoxyuridine degradation","type":"exact"}],"termid":"GO:0006219"}


id: GO:0004104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion.","definition_xrefs":["EC:3.1.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"cholinesterase activity","secondary_identifiers":["MetaCyc:CHOLINESTERASE-RXN","RHEA:21964"],"synonyms":[{"name":"BtChoEase activity","type":"related"},{"name":"acylcholine acylhydrolase activity","type":"related"},{"name":"anticholineesterase activity","type":"related"},{"name":"benzoylcholinesterase activity","type":"related"},{"name":"butyrylcholine esterase activity","type":"related"},{"name":"butyrylcholinesterase activity","type":"related"},{"name":"choline esterase II (unspecific) activity","type":"related"},{"name":"choline esterase activity","type":"related"},{"name":"non-specific cholinesterase activity","type":"related"},{"name":"propionylcholinesterase activity","type":"related"},{"name":"pseudocholinesterase activity","type":"related"}],"termid":"GO:0004104"}


id: GO:0044337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"},{"relation_name":"part_of","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"canonical Wnt signaling pathway involved in positive regulation of apoptotic process","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of apoptosis","type":"narrow"},{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of apoptotic process","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of apoptosis","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of apoptotic process","type":"exact"}],"termid":"GO:0044337"}


id: GO:0075259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spore-bearing structure over time, from its formation to the mature structure. A spore-bearing structure is an anatomical structure that produces new spores.","definition_xrefs":["GOC:pamgo_curators","GOC:mcc","GOC:di","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore-bearing structure development","synonyms":[{"name":"fruiting structure development","type":"exact"},{"name":"sporangium development","type":"broad"},{"name":"spore-bearing organ development","type":"related"},{"name":"sporophore development","type":"exact"}],"termid":"GO:0075259"}


id: MONDO:0011057
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013542"}]},"cv_name":"mondo","definition":"A disorder resulting from inadequate blood flow in the vessels that supply the brain. Representative examples include cerebrovascular ischemia, cerebral embolism, and cerebral infarction.","definition_xrefs":["NCIT:C2938"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"is_obsolete":false,"name":"cerebrovascular disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:62914000","ICD9:434.91","ICD10CM:I60-I69","ICD9:437.9","ICD9:437.8","EFO:0003763","DOID:6713","UMLS:C0007820","MEDGEN:858","ICD9:430-438.99","MESH:D002561"],"synonyms":[{"name":"CVA","type":"narrow"},{"name":"CVA (cerebral vascular accident)","type":"narrow"},{"name":"cerebral infarction","type":"narrow"},{"name":"cerebrovascular accident","type":"narrow"},{"name":"cerebrovascular disease","type":"exact"},{"name":"cerebrovascular disorder","type":"exact"},{"name":"stroke","type":"narrow"}],"termid":"MONDO:0011057","terms_by_termid":{"MONDO:0013542":null},"xrefs":{"Monarch":{"xref_id":"0011057"}}}


id: GO:0019732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against a fungus mediated through a body fluid. An example of this process is the antifungal humoral response in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"},{"relation_name":"is_a","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antifungal humoral response","secondary_identifiers":["GO:0019734","GO:0006966"],"termid":"GO:0019732"}


id: MONDO:0005959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of symptoms that are two- to three-fold more common in those who work in large, energy-efficient buildings, associated with an increased frequency of headaches, lethargy, and dry skin. Clinical manifestations include hypersensitivity pneumonitis (alveolitis, extrinsic allergic); allergic rhinitis (rhinitis, allergic, perennial); asthma; infections, skin eruptions, and mucous membrane irritation syndromes. Current usage tends to be less restrictive with regard to the type of building and delineation of complaints. (From Segen, Dictionary of Modern Medicine, 1992)","definition_xrefs":["MESH:D018877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"sick building syndrome","secondary_identifiers":["MEDGEN:48661","DOID:2710","SCTID:19076009","UMLS:C0037050","EFO:0007484"],"termid":"MONDO:0005959","xrefs":{"Monarch":{"xref_id":"0005959"}}}


id: PBO:0068961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 205, pseudogene","termid":"PBO:0068961"}


id: MONDO:0016072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of anomaly of puberty or/and menstrual cycle that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete anomaly of puberty or/and menstrual cycle of genetic origin (obsolete MONDO:0016072)","secondary_identifiers":["Orphanet:202940"],"synonyms":[{"name":"genetic anomaly of puberty or/and menstrual cycle","type":"exact"}],"termid":"MONDO:0016072","xrefs":{"Monarch":{"xref_id":"0016072"}}}


id: PBO:0065891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB38, member RAS oncogene family","termid":"PBO:0065891"}


id: PBO:0035905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0035905"}


id: PR:O14121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nde2 gene.","definition_xrefs":["UniProtKB:O14121","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.07","synonyms":[{"name":"Spom972h-nde2","type":"exact"}],"termid":"PR:O14121"}


id: GO:0046485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.","definition_xrefs":["PMID:15337120","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ether lipid metabolic process","secondary_identifiers":["Wikipedia:Ether_lipid"],"synonyms":[{"name":"ether lipid metabolism","type":"exact"},{"name":"plasmalogen metabolic process","type":"narrow"}],"termid":"GO:0046485"}


id: PBO:0063560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelota mRNA surveillance and ribosome rescue factor","termid":"PBO:0063560"}


id: GO:0005107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI-linked ephrin (obsolete GO:0005107)","synonyms":[{"name":"GPI-linked ephrin","type":"exact"}],"termid":"GO:0005107"}


id: MONDO:0011913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer's disease with an early onset (starts before the age of 65). It is caused by mutations in the PSEN1 gene.","definition_xrefs":["NCIT:C123412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"Alzheimer disease 3","secondary_identifiers":["MEDGEN:334304","OMIM:607822","MESH:C536598","UMLS:C1843013","GARD:16513","DOID:0110042"],"synonyms":[{"name":"AD","type":"related"},{"name":"AD3","type":"exact"},{"name":"Alzheimer disease 3","type":"exact"},{"name":"Alzheimer disease 3, early onset","type":"exact"},{"name":"Alzheimer disease 3, early-onset","type":"related"},{"name":"Alzheimer disease early onset type 3","type":"related"},{"name":"Alzheimer disease familial 3","type":"exact"},{"name":"Alzheimer disease type 3","type":"exact"},{"name":"Alzheimer disease, familial, 3","type":"related"},{"name":"Alzheimer disease, familial, 3, with spastic paraparesis and apraxia","type":"related"},{"name":"Alzheimer disease, familial, 3, with spastic paraparesis and unusual plaques","type":"related"},{"name":"Alzheimer disease, protection against, due to APOE3-Christchurch","type":"exact"},{"name":"Alzheimer disease, type 3","type":"exact"},{"name":"Alzheimer disease, type 3, with spastic paraparesis and apraxia","type":"exact"},{"name":"Alzheimer disease, type 3, with spastic paraparesis and unusual plaques","type":"exact"},{"name":"Alzheimer's disease 3","type":"exact"},{"name":"Alzheimer's disease type 3","type":"exact"},{"name":"PSEN1 early-onset autosomal dominant Alzheimer disease","type":"exact"},{"name":"early-onset autosomal dominant Alzheimer disease caused by mutation in PSEN1","type":"exact"},{"name":"familial Alzheimer disease, type 3","type":"exact"},{"name":"familial Alzheimer's disease, type 3","type":"exact"}],"termid":"MONDO:0011913","xrefs":{"Monarch":{"xref_id":"0011913"}}}


id: PBO:0017474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-during_which_ends","termid":"PBO:0017474"}


id: PATO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of male and external sexual characteristics of female.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphrodite","termid":"PATO:0001827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male pseudohermaphrodite","termid":"PATO:0001828"}


id: PBO:0058887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10524","termid":"PBO:0058887"}


id: GO:0140890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone chaperone that carries a H1 histone.","definition_xrefs":["PMID:12509435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone chaperone activity","termid":"GO:0140713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140597","GO:0003674","GO:0140104"],"is_obsolete":false,"name":"H1 histone chaperone activity","synonyms":[{"name":"H1 histone carrier activity","type":"exact"}],"termid":"GO:0140890"}


id: FYPO:0007307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation at centromere during vegetative growth","termid":"FYPO:0000893"},{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K14 acetylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007307"}


id: PBO:0073255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7","termid":"PBO:0073255"}


id: PBO:0052222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kielin cysteine rich BMP regulator","termid":"PBO:0052222"}


id: GO:0045272
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A subcomplex of the respiratory chain located in the plasma membrane. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone. Examples of this component are found in bacterial species.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respiratory chain complex I (obsolete GO:0045272)","synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex","type":"broad"},{"name":"respiratory chain complex I","type":"broad"}],"termid":"GO:0045272"}


id: PBO:0074261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO4A1 antisense RNA 2","termid":"PBO:0074261"}


id: GO:0016992
data:
  {"annotated_genes":["SJAG_03553"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75469],"is_not":false,"summary":null,"term":"GO:0016992"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein N6-(octanoyl)lysine + 2 sulfur + 2 S-adenosyl-L-methionine = protein N6-(lipoyl)lysine + 2 L-methionine + 2 5'-deoxyadenosyl.","definition_xrefs":["EC:2.8.1.8","PMID:18307109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"lipoate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0017140","MetaCyc:RXN0-949","Reactome:R-HSA-6793591","RHEA:16585"],"synonyms":[{"name":"LS","type":"related"},{"name":"LipA","type":"related"},{"name":"lipoic acid synthase","type":"exact"},{"name":"lipoyl synthase activity","type":"related"},{"name":"protein 6-N-(octanoyl)lysine:sulfur sulfurtransferase activity","type":"related"},{"name":"protein N6-(octanoyl)lysine:sulfur sulfurtransferase activity","type":"related"}],"termid":"GO:0016992","terms_by_termid":{"GO:0016992":null}}


id: MONDO:0016582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mitral malformation","secondary_identifiers":["Orphanet:2447","GARD:1495","UMLS:C5680882","MEDGEN:1842184"],"termid":"MONDO:0016582","xrefs":{"Monarch":{"xref_id":"0016582"}}}


id: MONDO:1010556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida, dog","secondary_identifiers":["OMIA:000933-9615"],"termid":"MONDO:1010556","xrefs":{"Monarch":{"xref_id":"1010556"}}}


id: MONDO:0031003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypercholanemia, familial","termid":"MONDO:0100327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hypercholanemia, familial, 2","secondary_identifiers":["OMIM:619256","UMLS:C5543243","GARD:18341","MEDGEN:1780531"],"synonyms":[{"name":"FHCA2","type":"exact"},{"name":"NTCP Deficiency","type":"exact"},{"name":"hypercholanemia, familial 2","type":"exact"}],"termid":"MONDO:0031003","xrefs":{"Monarch":{"xref_id":"0031003"}}}


id: PBO:0082533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-4 has a paralog, ASP3-2, that arose from a segmental duplication","termid":"PBO:0082533"}


id: PBO:0036161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_microtubule_polymerization","termid":"PBO:0036161"}


id: GO:0090192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:dph","GOC:tb","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"regulates","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glomerulus development","termid":"GO:0090192"}


id: FYPO:0005686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer microtubule bundles than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"microtubule bundles present in decreased numbers during mitotic interphase","synonyms":[{"name":"decreased interphase microtubule arrays","type":"related"},{"name":"decreased level of MT bundles during mitotic interphase","type":"exact"},{"name":"decreased microtubule bundling during mitotic interphase","type":"related"},{"name":"microtubule arrays present in decreased numbers during mitotic interphase","type":"related"},{"name":"microtubule bundles present in decreased numbers during interphase of mitotic cell cycle","type":"exact"},{"name":"microtubule bundles present in decreased numbers during mitotic interphase during vegetative growth","type":"exact"},{"name":"microtubule bundles present in reduced numbers during mitotic interphase","type":"exact"}],"termid":"FYPO:0005686"}


id: FYPO:0008118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome is decreased for specific introns with longer than average (>21 bp) branch site to acceptor distance.","definition_xrefs":["PMID:36095128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"decreased splicing of introns with branch point-distant 3’-splice site","synonyms":[{"name":"Inefficient excision of introns with branch point (BP)-distant 3’-splice site (ss)","type":"exact"}],"termid":"FYPO:0008118"}


id: PBO:0035852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035852"}


id: GO:0021661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 4 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:cls","GO_REF:0000021","GOC:curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 4 development","termid":"GO:0021570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}


id: MONDO:0016189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of myofibrillar proteins","termid":"MONDO:0016186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of filamin C","secondary_identifiers":["UMLS:C5680841","Orphanet:209047","GARD:20428","MEDGEN:1843024"],"synonyms":[{"name":"qualitative or quantitative defects of filamin type C","type":"exact"}],"termid":"MONDO:0016189","xrefs":{"Monarch":{"xref_id":"0016189"}}}


id: GO:0102463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-3-gentiobioside + UDP-L-rhamnose = quercetin 3-O-gentiobioside-7-O-rhamnoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-gentiobioside 7-O-rhamnosyltransferase activity (obsolete GO:0102463)","termid":"GO:0102463"}


id: PBO:0041322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 74","termid":"PBO:0041322"}


id: PBO:0085035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic subunit of N-terminal acetyltransferase of the NatC type; required for replication of dsRNA virus; member of the Sm protein family","termid":"PBO:0085035"}


id: PBO:0030693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_normal_morphology","termid":"PBO:0030693"}


id: MONDO:0006360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the penis","direct_ancestors":[{"relation_name":"is_a","term_name":"penile cancer","termid":"MONDO:0001325"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"penile carcinoma","secondary_identifiers":["UMLS:C0853105","DOID:3449","EFO:1000465","MEDGEN:208877","NCIT:C9061","SCTID:372106005"],"synonyms":[{"name":"cancer of penis","type":"broad"},{"name":"cancer of the penis","type":"broad"},{"name":"cancer penis","type":"broad"},{"name":"carcinoma of penis","type":"exact"},{"name":"carcinoma of the penis","type":"exact"},{"name":"penile cancer","type":"broad"},{"name":"penile cancer, adult","type":"narrow"},{"name":"penile carcinoma","type":"exact"},{"name":"penis carcinoma","type":"exact"}],"termid":"MONDO:0006360","xrefs":{"Monarch":{"xref_id":"0006360"}}}


id: MONDO:0021913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aquagenic pruritus is a conditionin which contact with water of any temperature causes intense itching, without any visible skin changes. The symptoms may begin immediately after contact and can last for an hour or more. The cause of aquagenic pruritus is unknown; however, familial cases have been described. It may be a symptom of polycythemia vera or another underlying condition. Overall, treatment is a challenge. Antihistamines, UVB phototherapy, PUVA therapy and various medications have been tried with varying degrees of success.","definition_xrefs":["GARD:0010278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"aquagenic pruritus","secondary_identifiers":["ICD9:698.8","SCTID:238695001","icd11.foundation:1090223712","MEDGEN:98026","UMLS:C0406409"],"synonyms":[{"name":"aquagenic pruritus","type":"exact"},{"name":"water-induced itching","type":"related"}],"termid":"MONDO:0021913","xrefs":{"Monarch":{"xref_id":"0021913"}}}


id: PBO:0003842
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TOP2","termid":"PBO:0003842"}


id: PBO:0002004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability protein Rmi1 (predicted)","termid":"PBO:0002004"}


id: GO:0047313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + an aromatic amino acid = L-glycine + an aromatic oxo acid.","definition_xrefs":["MetaCyc:2.6.1.60-RXN","EC:2.6.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aromatic-amino-acid-glyoxylate transaminase activity","secondary_identifiers":["RHEA:10900"],"synonyms":[{"name":"aromatic-amino-acid--glyoxylate aminotransferase activity","type":"related"},{"name":"aromatic-amino-acid-glyoxylate aminotransferase activity","type":"exact"},{"name":"aromatic-amino-acid:glyoxylate aminotransferase activity","type":"related"}],"termid":"GO:0047313"}


id: PBO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/ transcription initiation factor Taf9","termid":"PBO:0000296"}


id: PBO:0004843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog Cbh2","termid":"PBO:0004843"}


id: MONDO:0044238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lunulae of fingernails (obsolete MONDO:0044238)","secondary_identifiers":["OMIM:152600"],"synonyms":[{"name":"lunulae of fingernails","type":"related"}],"termid":"MONDO:0044238","xrefs":{"Monarch":{"xref_id":"0044238"}}}


id: PBO:0087892
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription coactivator; component of the ADA and SAGA transcriptional adaptor/HAT (histone acetyltransferase) complexes","termid":"PBO:0087892"}


id: FYPO:0008330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in the plasma membrane is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"},{"relation_name":"is_a","term_name":"altered level of substance in plasma membrane","termid":"FYPO:0008331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased phosphatidylinositol-4-phosphate level in plasma membrane","termid":"FYPO:0008330"}


id: MONDO:1010584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"},{"relation_name":"is_a","term_name":"congenital hypothyroidism, dog","termid":"MONDO:1010602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, dog","secondary_identifiers":["OMIA:000424-9615"],"termid":"MONDO:1010584","xrefs":{"Monarch":{"xref_id":"1010584"}}}


id: PBO:0051693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80B-WBP1 readthrough (NMD candidate)","termid":"PBO:0051693"}


id: GO:0006508
data:
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id: GO:0070318
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id: SO:0000707
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id: MONDO:0016980
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id: RO:0002349
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id: GO:0044574
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id: PBO:0044552
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id: MONDO:0020771
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id: PBO:0031570
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id: PBO:0081777
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id: FYPO:0005818
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id: GO:0010860
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id: PBO:0017557
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id: GO:1905150
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id: MONDO:0001751
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id: GO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the tridecapeptide neurotensin to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state.","definition_xrefs":["PMID:10390649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotensin receptor activity","synonyms":[{"name":"G protein coupled neurotensin receptor activity","type":"exact"},{"name":"G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"neurotensin receptor activity, G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0016492"}


id: PBO:0070646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 17","termid":"PBO:0070646"}


id: GO:0010088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the principal food-conducting tissue of a vascular plant.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem or xylem histogenesis","termid":"GO:0010087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phloem development","synonyms":[{"name":"phloem histogenesis","type":"exact"}],"termid":"GO:0010088"}


id: PBO:0088112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase yscI; zinc metalloproteinase that belongs to the peptidase family M18; often used as a marker protein in studies of autophagy and cytosol to vacuole targeting (CVT) pathway; protein increases in abundance and relative distribution to cytoplasmic foci increases upon DNA replication stress","termid":"PBO:0088112"}


id: MONDO:0005533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Particular variety of ulcerative colitis where only the left half of the colon is inflamed.","definition_xrefs":["EFO:0005623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ulcerative colitis","termid":"MONDO:0005101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"distal colitis","secondary_identifiers":["UMLS:C0860168","ICD9:558.9","NANDO:1200451","SCTID:373639002","MEDGEN:678582"],"synonyms":[{"name":"inflammation of left colon","type":"exact"},{"name":"left colon inflammation","type":"exact"}],"termid":"MONDO:0005533","xrefs":{"Monarch":{"xref_id":"0005533"}}}


id: MONDO:0020075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary non-syndromic obesity (obsolete MONDO:0020075)","secondary_identifiers":["Orphanet:98267"],"synonyms":[{"name":"genetic isolated obesity","type":"exact"},{"name":"genetic non-syndromic obesity","type":"exact"},{"name":"monogenic isolated obesity","type":"exact"},{"name":"monogenic obesity due to a leptin-melanocortin pathway anomaly","type":"narrow"}],"termid":"MONDO:0020075","xrefs":{"Monarch":{"xref_id":"0020075"}}}


id: MONDO:0018868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lysosomal storage disorder characterized by intralysosomal accumulation of sulfatides in various tissues, leading to progressive deterioration of motor and neurocognitive function.","definition_xrefs":["Orphanet:512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0005244","MONDO:0005559","MONDO:0002039","MONDO:0002561"],"is_obsolete":false,"name":"metachromatic leukodystrophy","secondary_identifiers":["DOID:10581","SCTID:66521008","NORD:1369","MESH:D007966","UMLS:C0023522","GARD:3230","SCTID:238031009","MedDRA:10067609","NANDO:1200078","NANDO:2200560","MEDGEN:6071","NCIT:C61251","icd11.foundation:172326564","SCTID:396338004"],"synonyms":[{"name":"MLD","type":"exact"},{"name":"Scholz cerebral sclerosis","type":"exact"},{"name":"arylsulfatase A deficiency","type":"exact"},{"name":"deficiency of cerebroside-sulfatase","type":"exact"},{"name":"sulfatide lipoidosis","type":"exact"}],"termid":"MONDO:0018868","xrefs":{"Monarch":{"xref_id":"0018868"}}}


id: MONDO:1012637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual differentiation that occurs in llamas and is characterized by male sex reversal with female karyotype (XX) and absence of the SRY gene.","definition_xrefs":["OMIA:000901-9844","PMID:10530329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XX difference of sexual development, llama","termid":"MONDO:1012637","xrefs":{"Monarch":{"xref_id":"1012637"}}}


id: PATO:0000956
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a bearer by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile","termid":"PATO:0000956"}


id: PBO:0046175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK2B, pseudogene","termid":"PBO:0046175"}


id: PR:O74750
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-xylose and UDP-N-acetylglucosamine transporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02706","PANTHER:PTHR10778:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transporter yea4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.09","secondary_identifiers":["UniProtKB:O74750"],"synonyms":[{"name":"Spom972h-SLC35B4","type":"exact"}],"termid":"PR:O74750"}


id: MONDO:0010974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephrotic syndrome in which the cause of the disease is a mutation in the NPHS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 2","secondary_identifiers":["UMLS:C1868672","OMIM:600995","GARD:15326","DOID:0080379","MEDGEN:358380"],"synonyms":[{"name":"NPHS2","type":"related"},{"name":"NPHS2 nephrotic syndrome","type":"exact"},{"name":"SRN1","type":"related"},{"name":"nephrotic syndrome caused by mutation in NPHS2","type":"exact"},{"name":"nephrotic syndrome, idiopathic, steroid-resistant","type":"related"},{"name":"nephrotic syndrome, steroid-resistant, autosomal recessive","type":"related"},{"name":"nephrotic syndrome, type 2","type":"exact"}],"termid":"MONDO:0010974","xrefs":{"Monarch":{"xref_id":"0010974"}}}


id: GO:0032406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MutLbeta mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex binding","termid":"GO:0032404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MutLbeta complex binding","termid":"GO:0032406"}


id: PBO:0050252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 30","termid":"PBO:0050252"}


id: GO:0035831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of palmatine, a berberine alkaloid found in many plants.","definition_xrefs":["GOC:yaf","PMID:21327819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid biosynthetic process","termid":"GO:0033075"},{"relation_name":"is_a","term_name":"palmatine metabolic process","termid":"GO:0035830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"palmatine biosynthetic process","synonyms":[{"name":"palmatine anabolism","type":"exact"},{"name":"palmatine biosynthesis","type":"exact"},{"name":"palmatine formation","type":"exact"},{"name":"palmatine synthesis","type":"exact"}],"termid":"GO:0035831"}


id: SO:0001553
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A functional variant that changes the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_product_level_variant","synonyms":[{"name":"translational product level variant","type":"exact"}],"termid":"SO:0001553"}


id: MONDO:0060745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with or without epilepsy or cerebellar ataxia","secondary_identifiers":["MEDGEN:1648354","UMLS:C4748041","OMIM:618060"],"synonyms":[{"name":"IDDECA","type":"related"},{"name":"intellectual developmental disorder with or without epilepsy or cerebellar ataxia","type":"exact"}],"termid":"MONDO:0060745","xrefs":{"Monarch":{"xref_id":"0060745"}}}


id: PBO:0089607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine/threonine protein phosphatase PP2C catalytic subunit Ptc4","termid":"PBO:0089607"}


id: PR:O74892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04937","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.08c","secondary_identifiers":["UniProtKB:O74892"],"synonyms":[{"name":"Spom972h-RPS2","type":"exact"}],"termid":"PR:O74892"}


id: GO:1905917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:rph","PMID:25089138","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"},{"relation_name":"positively_regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell differentiation involved in phenotypic switching","synonyms":[{"name":"activation of cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"up regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905917"}


id: GO:0004143
data:
  {"annotated_genes":["SJAG_02429","SJAG_04883"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66751,97988],"is_not":false,"summary":null,"term":"GO:0004143"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol + ATP = a 1,2-diacyl-sn-glycero-3-phosphate + ADP + H+.","definition_xrefs":["GOC:elh","RHEA:10272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02429":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"ATP-dependent diacylglycerol kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.107","Reactome:R-HSA-426240","MetaCyc:DIACYLGLYKIN-RXN"],"synonyms":[{"name":"DGK activity","type":"related"},{"name":"diacylglycerol kinase activity","type":"broad"},{"name":"diacylglycerol kinase activity (ATP)","type":"exact"},{"name":"diglyceride kinase activity","type":"broad"}],"termid":"GO:0004143","terms_by_termid":{"GO:0004143":null}}


id: GO:0047229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 13-hydroxydocosanoate + UDP-D-glucose = 13-beta-D-glucosyloxydocosanoate + UDP.","definition_xrefs":["EC:2.4.1.158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"13-hydroxydocosanoate 13-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:HYDROXYDOCOSANOATE-TRANS-RXN","RHEA:22316"],"synonyms":[{"name":"13-glucosyloxydocosanoate 2'-beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-13-hydroxydocosanoate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:13-hydroxydocosanoate 13-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:13-hydroxydocosanoic acid glucosyltransferase activity","type":"related"},{"name":"UDPglucose:13-hydroxydocosanoate 13-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-hydroxydocosanoate glucosyltransferase activity","type":"related"}],"termid":"GO:0047229"}


id: PBO:0040839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell acute lymphoblastic leukemia expressed","termid":"PBO:0040839"}


id: FYPO:0000158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of DNA in a cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"DNA content increased","termid":"FYPO:0002729"},{"relation_name":"is_a","term_name":"altered DNA level during vegetative growth","termid":"FYPO:0004321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"DNA content increased during vegetative growth","synonyms":[{"name":"DNA content increased during mitotic cell cycle","type":"related"},{"name":"increased DNA content during vegetative growth","type":"exact"},{"name":"increased DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0000158"}


id: FYPO:0005325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-free translesion synthesis is normal (i.e. indistinguishable from wild type). Error-free translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across from the lesion.","definition_xrefs":["GO:0070987","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal error-free translesion synthesis","synonyms":[{"name":"normal error-free translesion synthesis during mitotic cell cycle","type":"related"},{"name":"normal error-free translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0005325"}


id: PBO:0038819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 22","termid":"PBO:0038819"}


id: PBO:0073721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAIN motif family member 1","termid":"PBO:0073721"}


id: MONDO:0015490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete predominantly small-vessel vasculitis (obsolete MONDO:0015490)","secondary_identifiers":["Orphanet:156146"],"termid":"MONDO:0015490","xrefs":{"Monarch":{"xref_id":"0015490"}}}


id: PBO:0034414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_process_that_acts_on_population_of","termid":"PBO:0034414"}


id: PBO:0047710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 1","termid":"PBO:0047710"}


id: PBO:0068618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 70, pseudogene","termid":"PBO:0068618"}


id: PBO:0051690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex ATPase subunit","termid":"PBO:0051690"}


id: GO:0018966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving styrene, an aromatic hydrocarbon liquid soluble in ether and alcohol. When heated, exposed to light or added to a peroxide catalyst, it undergoes polymerization to form polystyrene, a versatile material used in the manufacture of plastics, synthetic rubber, thermal insulation, and packaging. Styrene is a classified mutagen and a suspected carcinogen.","definition_xrefs":["UM-BBD_pathwayID:sty","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"styrene metabolic process","synonyms":[{"name":"styrene metabolism","type":"exact"}],"termid":"GO:0018966"}


id: PR:P79082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mgr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mgr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.06c","synonyms":[{"name":"Spom972h-mgr2","type":"exact"}],"termid":"PR:P79082"}


id: PBO:0056448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3","termid":"PBO:0056448"}


id: PBO:0050822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyccin PI4KA lipid kinase complex subunit 2","termid":"PBO:0050822"}


id: GO:0033874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + 5beta-scymnol = 5beta-scymnol sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["EC:2.8.2.32","RHEA:15477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"scymnol sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R07798","MetaCyc:2.8.2.32-RXN"],"termid":"GO:0033874"}


id: PBO:0065373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 1","termid":"PBO:0065373"}


id: GO:0021635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the trigeminal nerve to attain its fully functional state. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"trigeminal nerve development","termid":"GO:0021559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal nerve maturation","synonyms":[{"name":"CN V maturation","type":"related"}],"termid":"GO:0021635"}


id: GO:0031776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a melanin-concentrating hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"melanin-concentrating hormone receptor binding","synonyms":[{"name":"melanin-concentrating hormone receptor ligand","type":"narrow"}],"termid":"GO:0031776"}


id: PBO:0050601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 11-beta dehydrogenase 1","termid":"PBO:0050601"}


id: MONDO:1012850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked dilated cardiomyopathy that occurs in rabbits due to a mutation in the DMD gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy, rabbit","termid":"MONDO:1010452"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated cardiomyopathy, DMD-related, rabbit","secondary_identifiers":["OMIA:002308-9986"],"synonyms":[{"name":"cardiomyopathy, X-linked dilated, rabbit","type":"related"}],"termid":"MONDO:1012850","xrefs":{"Monarch":{"xref_id":"1012850"}}}


id: PATO:0001543
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to being turned, bowed, or twisted without breaking.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a solid","termid":"PATO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flexibility","termid":"PATO:0001543"}


id: GO:0106089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in sprouting angiogenesis.","definition_xrefs":["PMID:24177325","GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106088"},{"relation_name":"is_a","term_name":"negative regulation of sprouting angiogenesis","termid":"GO:1903671"},{"relation_name":"negatively_regulates","term_name":"cell adhesion involved in sprouting angiogenesis","termid":"GO:0120078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106089"}


id: PBO:0065452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase, 6 pseudogene 3","termid":"PBO:0065452"}


id: GO:0034810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5-dihydroxybenzo(a)pyrene + O2 = 4,5-chrysenedicarboxylate.","definition_xrefs":["UM-BBD_reactionID:r1128"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,5-dihydroxybenzo(a)pyrene dioxygenase activity (obsolete GO:0034810)","termid":"GO:0034810"}


id: GO:0044512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of glucagon-like peptide receptor 1 activity in of the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of glucagon-like peptide receptor 1 activity in another organism (obsolete GO:0044512)","synonyms":[{"name":"envenomation resulting in modulation of glucagon-like peptide receptor 1 activity in other organism","type":"exact"}],"termid":"GO:0044512"}


id: MONDO:0018611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract 16 multiple types","termid":"MONDO:0013411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset lamellar cataract","secondary_identifiers":["Orphanet:441452","UMLS:C5681191","GARD:13155","MEDGEN:1843303"],"termid":"MONDO:0018611","xrefs":{"Monarch":{"xref_id":"0018611"}}}


id: PBO:0027840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_in_stationary_phase_during_nitrogen_limitation","termid":"PBO:0027840"}


id: PBO:0067219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 286, pseudogene","termid":"PBO:0067219"}


id: PBO:0031565
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_binding","termid":"PBO:0031565"}


id: MONDO:0014466
data:
  {"annotated_genes":["SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87202],"is_not":false,"summary":null,"term":"MONDO:0014466"}]},"cv_name":"mondo","definition":"Any Neu-Laxova syndrome in which the cause of the disease is a mutation in the PSAT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Neu-Laxova syndrome","termid":"MONDO:0000179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"Neu-Laxova syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:863456","Orphanet:583602","DOID:0080075","OMIM:616038","UMLS:C4015019","GARD:22335"],"synonyms":[{"name":"NEU-Laxova syndrome 2","type":"related"},{"name":"NLS2","type":"related"},{"name":"Neu-Laxova syndrome 2","type":"exact"},{"name":"Neu-Laxova syndrome caused by mutation in PSAT1","type":"exact"},{"name":"Neu-Laxova syndrome due to phosphoserine aminotransferase deficiency","type":"exact"},{"name":"Neu-Laxova syndrome type 2","type":"exact"},{"name":"PSAT1 Neu-Laxova syndrome","type":"exact"},{"name":"phosphoserine aminotransferase deficiency, prenatal form","type":"exact"}],"termid":"MONDO:0014466","terms_by_termid":{"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0014466"}}}


id: PBO:0003905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1 repeat protein Nif1","termid":"PBO:0003905"}


id: GO:2000855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mineralocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of corticosteroid hormone secretion","termid":"GO:2000846"},{"relation_name":"regulates","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of mineralocorticoid secretion","termid":"GO:2000855"}


id: PBO:0034205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_model_of","termid":"PBO:0034205"}


id: PBO:0061760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase 3","termid":"PBO:0061760"}


id: MONDO:0013451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive myoclonic epilepsy type 5 (obsolete MONDO:0013451)","termid":"MONDO:0013451","xrefs":{"Monarch":{"xref_id":"0013451"}}}


id: PBO:0051305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR-3 (pseudogene)","termid":"PBO:0051305"}


id: PBO:0078320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 2","termid":"PBO:0078320"}


id: PR:Q8TFG4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB18E9.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFG4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB18E9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB18E9.04c","synonyms":[{"name":"Spom972h-SPAPB18E9.04c","type":"exact"}],"termid":"PR:Q8TFG4"}


id: PBO:0029730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_1,3-beta-D-glucan_synthase_activity","termid":"PBO:0029730"}


id: GO:0046595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the directed movement of mRNA to the oocyte pole plasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of RNA localization","termid":"GO:0051236"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0044085"],"is_obsolete":false,"name":"establishment of pole plasm mRNA localization","secondary_identifiers":["GO:0048121"],"synonyms":[{"name":"establishment of oocyte pole plasm mRNA localization","type":"exact"},{"name":"establishment of pole plasm mRNA localisation","type":"exact"}],"termid":"GO:0046595"}


id: PR:Q9Y810
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A surfeit locus protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02894","PANTHER:PTHR23427:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome oxidase assembly protein shy1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1215.01","secondary_identifiers":["UniProtKB:Q9Y810"],"synonyms":[{"name":"SURF1-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SURF1","type":"exact"}],"termid":"PR:Q9Y810"}


id: MONDO:0007689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase 3","secondary_identifiers":["MEDGEN:331129","OMIM:139290","UMLS:C1841763"],"synonyms":[{"name":"GUK3","type":"related"},{"name":"guanylate KINASE 3","type":"related"},{"name":"guanylate kinase 3","type":"exact"},{"name":"guanylate kinase type 3","type":"exact"}],"termid":"MONDO:0007689","xrefs":{"Monarch":{"xref_id":"0007689"}}}


id: PBO:0072956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stearoyl-CoA desaturase pseudogene 1","termid":"PBO:0072956"}


id: PBO:0030713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock_during_vegetative_growth","termid":"PBO:0030713"}


id: PBO:0063956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2","termid":"PBO:0063956"}


id: FYPO:0008100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 5S rRNA measured in a cell is higher than normal during phosphate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased polyadenylated 5S rRNA level during cellular response to phosphate starvation","termid":"FYPO:0008100"}


id: PBO:0043192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKAP2 divergent transcript","termid":"PBO:0043192"}


id: PBO:0031857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_septum_during_vegetative_growth","termid":"PBO:0031857"}


id: GO:0009427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the rings of the bacterial-type flagellar basal body; anchors the basal body to the outer membrane.","definition_xrefs":["GOC:mtg_sensu","PMID:10572114","GOC:cilia","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body, distal rod","termid":"GO:0009426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, distal rod, L ring","synonyms":[{"name":"flagellar basal body, distal rod, L ring","type":"exact"},{"name":"flagellin-based flagellum basal body, distal rod, L ring","type":"exact"}],"termid":"GO:0009427"}


id: GO:0021758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the putamen over time from its initial formation until its mature state. The putamen is the lens-shaped basal ganglion involved with control of voluntary movement in the brain.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","ISBN:0878937420","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putamen development","termid":"GO:0021758"}


id: PBO:0052513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 26","termid":"PBO:0052513"}


id: GO:1903366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fear response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8677262","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"negatively_regulates","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fear response","synonyms":[{"name":"down regulation of fear response","type":"exact"},{"name":"down regulation of physiological fear response","type":"exact"},{"name":"down-regulation of fear response","type":"exact"},{"name":"down-regulation of physiological fear response","type":"exact"},{"name":"downregulation of fear response","type":"exact"},{"name":"downregulation of physiological fear response","type":"exact"},{"name":"inhibition of fear response","type":"narrow"},{"name":"inhibition of physiological fear response","type":"narrow"},{"name":"negative regulation of physiological fear response","type":"exact"}],"termid":"GO:1903366"}


id: PBO:0073531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 2, endophilin A1","termid":"PBO:0073531"}


id: MONDO:0012629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia characterized by autosomal dominant inheritance of attacks of dystonic or choreathetotic movements precipitated by stress, fatigue, coffee or alcohol intake or menstruation that has material basis in variation in the chromosome region 2q31.","definition_xrefs":["DOID:0090047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal nonkinesigenic dyskinesia","termid":"MONDO:0700088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"paroxysmal nonkinesigenic dyskinesia 2","secondary_identifiers":["NANDO:1200533","UMLS:C1970149","OMIM:611147","MESH:C567001","GARD:15510","MEDGEN:370188"],"synonyms":[{"name":"PNKD2","type":"related"},{"name":"dystonia 20","type":"related"},{"name":"paroxysmal nonkinesigenic dyskinesia 2","type":"exact"},{"name":"paroxysmal nonkinesigenic dyskinesia type 2","type":"exact"}],"termid":"MONDO:0012629","xrefs":{"Monarch":{"xref_id":"0012629"}}}


id: PBO:0111309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UniProt-GOA_version","termid":"PBO:0111309"}


id: PBO:0113757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, OB fold, predicted role in DNA metabolism","termid":"PBO:0113757"}


id: MONDO:0035635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short stature-skeletal dysplasia-retinal degeneration-intellectual disability-sensorineural hearing loss syndrome (obsolete MONDO:0035635)","termid":"MONDO:0035635","xrefs":{"Monarch":{"xref_id":"0035635"}}}


id: PR:Q9US10
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC607.08c gene.","definition_xrefs":["UniProtKB:Q9US10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C607.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.08c","synonyms":[{"name":"Spom972h-SPAC607.08c","type":"exact"},{"name":"uncharacterized membrane protein C6F6.13c (Schizosaccharomyces pombe 972h-)","type":"related"}],"termid":"PR:Q9US10"}


id: PATO:0000743
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000743 arousal value (obsolete PATO:0000743)","termid":"PATO:0000743"}


id: PBO:0057588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 892a","termid":"PBO:0057588"}


id: PBO:0052015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JMJD4 pseudogene 1","termid":"PBO:0052015"}


id: MOD:00823
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionine residue and an L-cysteine residue by a thioester bond to form S-(L-methionyl)-L-cysteine.","definition_xrefs":["RESID:AA0413","PubMed:12146974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-methionyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-4-(methylsulfanyl)butanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Methionyl cysteine thioester (Cys-Met)","type":"exact"},{"name":"S-(2-amino-4-methylthiobutanoyl)cysteine","type":"exact"},{"name":"S-(L-methionyl)-L-cysteine","type":"exact"},{"name":"XLNK1MetSCys","type":"exact"},{"name":"methionine cysteine thioester","type":"exact"}],"termid":"MOD:00823"}


id: PBO:0071762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 9","termid":"PBO:0071762"}


id: MONDO:0800126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lung disorder characterized by ectopic bone formation within lung parenchyma. DPO can be idiopathic or associated with a variety of cardiovascular, respiratory diseases or other disorders. There are mainly two forms of DPO: nodular and dendriform.","definition_xrefs":["PMID:31245272","PMID:18664981","PMID:19958677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic pulmonary ossification","termid":"MONDO:0800126","xrefs":{"Monarch":{"xref_id":"0800126"}}}


id: GO:0160249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues, occurring through a UDP-glucose intermediate.","definition_xrefs":["MetaCyc:PWY-5067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"glycogen biosynthetic process via UDP-glucose","termid":"GO:0160249"}


id: PBO:0049670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 2","termid":"PBO:0049670"}


id: GO:0001925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of B-1 B cell differentiation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B-1 B cell differentiation","termid":"GO:0001924"},{"relation_name":"is_a","term_name":"negative regulation of B cell differentiation","termid":"GO:0045578"},{"relation_name":"negatively_regulates","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B-1 B cell differentiation","synonyms":[{"name":"down regulation of B-1 B cell differentiation","type":"exact"},{"name":"down-regulation of B-1 B cell differentiation","type":"exact"},{"name":"downregulation of B-1 B cell differentiation","type":"exact"},{"name":"inhibition of B-1 B cell differentiation","type":"narrow"},{"name":"negative regulation of B-1 B cell development","type":"related"},{"name":"negative regulation of B-1 B lymphocyte differentiation","type":"exact"},{"name":"negative regulation of B-1 B-cell differentiation","type":"exact"},{"name":"negative regulation of B-1 B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0001925"}


id: GO:0007392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Events that occur at the start of dorsal closure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"dorsal closure","termid":"GO:0007391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of dorsal closure","termid":"GO:0007392"}


id: PBO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin ligase complex subunit, involved in proteasome-dependent catabolite inactivation of FBPase (predicted)","termid":"PBO:0003169"}


id: GO:1990695
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi trans cisterna membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["PMID:16038056","GOC:bhm","PMID:24119662"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of Golgi trans cisterna membrane (obsolete GO:1990695)","synonyms":[{"name":"intrinsic component of trans-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990695"}


id: MONDO:0002283
data:
  {"annotated_genes":["SJAG_00115","SJAG_04757","SJAG_03866","SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87259,87260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"},{"annotations":[87245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010476"},{"annotations":[85962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014290"}]},"cv_name":"mondo","definition":"A nonspecific term referring both to the pathologic finding of swelling of distal portions of axons in the brain and to disorders which feature this finding. Neuroaxonal dystrophy is seen in various genetic diseases, vitamin deficiencies, and aging. Infantile neuroaxonal dystrophy is an autosomal recessive disease characterized by arrested psychomotor development at 6 months to 2 years of age, ataxia, brain stem dysfunction, and quadriparesis. Juvenile and adult forms also occur. Pathologic findings include brain atrophy and widespread accumulation of axonal spheroids throughout the neuroaxis, peripheral nerves, and dental pulp. (From Davis & Robertson, Textbook of Neuropathology, 2nd ed, p927)","definition_xrefs":["MESH:D019150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_03866":null,"SJAG_04757":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neuroaxonal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2367","NCIT:C161542","MEDGEN:90924","UMLS:C0338473","SCTID:230365004"],"termid":"MONDO:0002283","terms_by_termid":{"MONDO:0010476":null,"MONDO:0011706":null,"MONDO:0014290":null},"xrefs":{"Monarch":{"xref_id":"0002283"}}}


id: PBO:0051327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-18 (pseudogene)","termid":"PBO:0051327"}


id: PBO:0028943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_(1->3)-beta-D-glucan_level_at_cell_tip","termid":"PBO:0028943"}


id: PBO:0111799
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family","termid":"PBO:0111799"}


id: RO:0002469
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"provides_nutrients_for","termid":"RO:0002469"}


id: GO:1904373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a kainic acid stimulus.","definition_xrefs":["GOC:TermGenie","PMID:17443789","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to kainic acid","termid":"GO:1904373"}


id: PBO:0087853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator; involved in regulation of invertase and glucoamylase expression, invasive growth and pseudohyphal differentiation, iron uptake, chromium accumulation, and response to osmotic stress; localizes to the nucleus; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087853"}


id: GO:1904860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitotic DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:16849602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA synthesis involved in mitotic DNA replication","synonyms":[{"name":"DNA anabolism involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA anabolism involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in mitotic DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in mitotic DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1904860"}


id: PBO:0036441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex actin-like protein Arp5","termid":"PBO:0036441"}


id: PBO:0051473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-59 (pseudogene)","termid":"PBO:0051473"}


id: FYPO:0007104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation is abnormal along the chromosome arms.","definition_xrefs":["PMID:22292001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal homologous chromosome arm segregation","synonyms":[{"name":"abnormal homologous chromosome arm segregation during first meiotic nuclear division","type":"exact"},{"name":"abnormal homologous chromosome arm segregation during meiosis I","type":"exact"},{"name":"abnormal homologous chromosome arm separation","type":"related"}],"termid":"FYPO:0007104"}


id: FYPO:0005813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or both ends of a microtubule is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to microtubule cytoskeleton during mitotic interphase","termid":"FYPO:0003185"},{"relation_name":"is_a","term_name":"normal intracellular protein transport during vegetative growth","termid":"FYPO:0005397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to microtubule end during mitotic interphase","synonyms":[{"name":"normal protein localisation to microtubule end during mitotic interphase","type":"exact"},{"name":"normal protein localization to microtubule end during interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to microtubule end during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005813"}


id: GO:0014052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"regulation of GABA secretion","type":"exact"}],"termid":"GO:0014052"}


id: PBO:0045597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 8 (pseudogene)","termid":"PBO:0045597"}


id: PBO:0083585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; transcript is predicted to be spliced but there is no evidence that it is spliced in vivo","termid":"PBO:0083585"}


id: GO:0048262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of asymmetry from the dorsal to the ventral side; as, the dorsoventral axis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of bilateral symmetry","termid":"GO:0009855"},{"relation_name":"part_of","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of dorsal/ventral asymmetry","synonyms":[{"name":"determination of adaxial/abaxial asymmetry","type":"related"},{"name":"determination of dorsal-ventral asymmetry","type":"exact"},{"name":"determination of dorsoventral asymmetry","type":"exact"}],"termid":"GO:0048262"}


id: GO:1904090
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of peptidase inhibitor activity.","definition_xrefs":["GOC:bhm","GO_REF:0000088","PMID:20860624","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"peptidase inhibitor complex","synonyms":[{"name":"Cathepsin-B - cystatin-A complex","type":"narrow"}],"termid":"GO:1904090"}


id: MONDO:0014902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nasopharyngeal carcinoma in which the cause of the disease is a mutation in the MST1R gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal carcinoma, susceptibility to, 3","secondary_identifiers":["UMLS:C4310729","OMIM:617075","MEDGEN:934696"],"synonyms":[{"name":"MST1R nasopharyngeal carcinoma","type":"exact"},{"name":"NPCA3","type":"exact"},{"name":"nasopharyngeal carcinoma caused by mutation in MST1R","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, 3","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, 3; NPCA3","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to nasopharyngeal carcinoma 3","type":"related"}],"termid":"MONDO:0014902","xrefs":{"Monarch":{"xref_id":"0014902"}}}


id: PBO:0059781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 7","termid":"PBO:0059781"}


id: PBO:0111688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, subunit alpha","termid":"PBO:0111688"}


id: MONDO:0004741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive inherited metabolic disorder caused by mutations in the FAH, HPD, and TAT genes. It is characterized by deficiency of one of the enzymes that are involved in the metabolism of tyrosine. It results in elevated blood tyrosine levels and accumulation of tyrosine and its byproducts in the liver, kidney, nervous system and other organs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"tyrosinemia","secondary_identifiers":["OMIMPS:276700","UMLS:C0268483","MESH:D020176","NCIT:C98640","ICD9:270.2","DOID:9275","SCTID:190694001","MEDGEN:78682","ICD10CM:E70.21"],"termid":"MONDO:0004741","xrefs":{"Monarch":{"xref_id":"0004741"}}}


id: PBO:0003448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidyl-N-methylethanolamine N-methyltransferase (predicted)","termid":"PBO:0003448"}


id: PBO:0017805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-HIT family C/D snoRNP assembly protein Hit1 (predicted)","termid":"PBO:0017805"}


id: MONDO:0017990
data:
  {"annotated_genes":["SJAG_02717","SJAG_04901","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013529"},{"annotations":[87515,87514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013966"},{"annotations":[87031,87030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"}]},"cv_name":"mondo","definition":"Catecholaminergic polymorphic ventricular tachycardia (CPVT) is a severe genetic arrhythmogenic disorder characterized by adrenergically induced ventricular tachycardia (VT) manifesting as syncope and sudden death.","definition_xrefs":["Orphanet:3286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"ventricular tachycardia, familial","termid":"MONDO:0008648"},{"relation_name":"is_a","term_name":"polymorphic ventricular tachycardia","termid":"MONDO:0020575"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02717":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"catecholaminergic polymorphic ventricular tachycardia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:4421","SCTID:419671004","ICD10CM:I47.2","icd11.foundation:976309888","MESH:C536334","MEDGEN:1803763","UMLS:C5574922","NANDO:2200221","OMIMPS:604772","NANDO:2200216","DOID:0060674"],"synonyms":[{"name":"CPVT","type":"exact"},{"name":"bidirectional tachycardia induced by catecholamine","type":"exact"},{"name":"catecholamine-induced polymorphic ventricular tachycardia","type":"related"},{"name":"catecholaminergic polymorphic ventricular tachycardia","type":"exact"},{"name":"double tachycardia induced by catecholamines","type":"exact"},{"name":"familial polymorphic ventricular tachycardia","type":"related"},{"name":"malignant paroxysmal ventricular tachycardia","type":"exact"},{"name":"multifocal ventricular premature beats","type":"exact"},{"name":"polymorphic catecholergic ventricular tachycardia","type":"related"},{"name":"stress-induced polymorphic ventricular tachycardia","type":"related"},{"name":"syncopal paroxysmal tachycardia","type":"related"},{"name":"ventricular tachycardia, catecholaminergic polymorphic","type":"exact"}],"termid":"MONDO:0017990","terms_by_termid":{"MONDO:0013529":null,"MONDO:0013966":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0017990"}}}


id: PBO:0034456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_inositol_phosphate_phosphatase_activity","termid":"PBO:0034456"}


id: PBO:0001131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Lysine","termid":"PBO:0001131"}


id: GO:0071855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide receptor.","definition_xrefs":["GOC:kmv","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"neuropeptide receptor binding","termid":"GO:0071855"}


id: GO:1901118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cephamycin C.","definition_xrefs":["UniPathway:UPA00183","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic biosynthetic process","termid":"GO:0030654"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"cephamycin C metabolic process","termid":"GO:1901116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cephamycin C biosynthetic process","synonyms":[{"name":"cephamycin C anabolism","type":"exact"},{"name":"cephamycin C biosynthesis","type":"exact"},{"name":"cephamycin C formation","type":"exact"},{"name":"cephamycin C synthesis","type":"exact"}],"termid":"GO:1901118"}


id: PBO:0070589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 55","termid":"PBO:0070589"}


id: PATO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000924 relative enzyme function (obsolete PATO:0000924)","termid":"PATO:0000924"}


id: MONDO:0014073
data:
  {"annotated_genes":["SJAG_04567","SJAG_03815","SJAG_02919"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85473,85474,85475],"is_not":false,"summary":null,"term":"MONDO:0014073"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the CRYAB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15916","UMLS:C3554649","MEDGEN:767563","DOID:0110450","OMIM:615184"],"synonyms":[{"name":"CMD1II","type":"exact"},{"name":"CRYAB familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1II","type":"related"},{"name":"cardiomyopathy, dilated, type 1II","type":"exact"},{"name":"dilated cardiomyopathy type 1II","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in CRYAB","type":"exact"}],"termid":"MONDO:0014073","terms_by_termid":{"MONDO:0014073":null},"xrefs":{"Monarch":{"xref_id":"0014073"}}}


id: GO:0061954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or extent of actin polymerization as part of sperm capacitation. This process prevents a spontaneous acrosome reaction.","definition_xrefs":["PMID:25966627","PMID:26514336","PMID:27178669","PMID:15749953"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament polymerization involved in sperm capacitation (obsolete GO:0061954)","termid":"GO:0061954"}


id: PBO:0052705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 6","termid":"PBO:0052705"}


id: PBO:0050455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOMER2 pseudogene 1","termid":"PBO:0050455"}


id: PBO:0018067
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine DeAminase","termid":"PBO:0018067"}


id: MONDO:0008431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete slipped femoral capital epiphyses (obsolete MONDO:0008431)","termid":"MONDO:0008431","xrefs":{"Monarch":{"xref_id":"0008431"}}}


id: GO:0018756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ammeline + H2O = ammelide + NH3.","definition_xrefs":["PMID:1991731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"ammeline aminohydrolase activity","secondary_identifiers":["MetaCyc:RXN-8016","RHEA:26201"],"termid":"GO:0018756"}


id: PBO:0004292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein Nap2 (predicted)","termid":"PBO:0004292"}


id: PBO:0048932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLPH3 divergent transcript","termid":"PBO:0048932"}


id: SO:1000122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000122 sequence_variant_causing_polypeptide_post_translational_processing_change (obsolete SO:1000122)","synonyms":[{"name":"mutation causing polypeptide post translational processing change","type":"related"},{"name":"polypeptide post-translational processing affected","type":"exact"},{"name":"sequence variant causing polypeptide post translational processing change","type":"exact"}],"termid":"SO:1000122"}


id: GO:0030126
data:
  {"annotated_genes":["SJAG_02482","SJAG_04569","SJAG_04391","SJAG_01508","SJAG_04474","SJAG_04070","SJAG_00192","SJAG_04002","SJAG_02234"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64393,71238,73858,78374,78719,80220,93554,98772,107443],"is_not":false,"summary":null,"term":"GO:0030126"}]},"cv_name":"cellular_component","definition":"One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state.","definition_xrefs":["PMID:11252894","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle coat","termid":"GO:0030120"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"COPI-coated vesicle membrane","termid":"GO:0030663"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_01508":null,"SJAG_02234":null,"SJAG_02482":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04569":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0031410","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"COPI vesicle coat","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0017167"],"synonyms":[{"name":"coatomer","type":"exact"}],"termid":"GO:0030126","terms_by_termid":{"GO:0030126":null}}


id: RO:HOM0000063
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves orthologous pairs of interacting molecules in different organisms.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_interology_relationship_with","synonyms":[{"name":"interologous to","type":"exact"}],"termid":"RO:HOM0000063"}


id: FYPO:0006818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere outer repeat","termid":"FYPO:0002842"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at centromere outer repeat","synonyms":[{"name":"decreased protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"decreased protein localization to chromatin at centromere otr","type":"exact"},{"name":"decreased protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at pericentric region during vegetative growth","type":"related"},{"name":"decreased protein localization to chromatin at pericentromeric region during vegetative growth","type":"related"},{"name":"reduced protein localization to chromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0006818"}


id: PBO:0111883
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT2 subfamily","termid":"PBO:0111883"}


id: GO:1905660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitotic checkpoint complex.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:26882497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"mitotic checkpoint complex assembly","synonyms":[{"name":"MCC assembly","type":"exact"},{"name":"MCC formation","type":"exact"},{"name":"mitotic checkpoint complex formation","type":"exact"}],"termid":"GO:1905660"}


id: GO:0030131
data:
  {"annotated_genes":["SJAG_00379","SJAG_04609","SJAG_04565","SJAG_02805","SJAG_01809","SJAG_04931","SJAG_00800","SJAG_00104","SJAG_01167"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63887],"is_not":false,"summary":null,"term":"GO:0030131"},{"annotations":[113113,113325,62227,78094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030121"},{"annotations":[58322,78431,74685,108652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A membrane coat adaptor complex that links clathrin to a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"},{"relation_name":"part_of","term_name":"clathrin coat","termid":"GO:0030118"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02805":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"clathrin adaptor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030131","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030131":null}}


id: PBO:0057678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1268b","termid":"PBO:0057678"}


id: PBO:0089844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase with TPR repeat","termid":"PBO:0089844"}


id: GO:0030382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of sperm mitochondria; the process in which they take on their characteristic morphology; they are flattened, elongated, and arranged circumferentially into a tight helical coil around the tail-dense fibers of the mature sperm.","definition_xrefs":["GOC:jl","PMID:8833144","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"sperm mitochondrion organization","synonyms":[{"name":"sperm mitochondria organisation","type":"exact"},{"name":"sperm mitochondria organization and biogenesis","type":"related"},{"name":"sperm mitochondrion organization and biogenesis","type":"related"}],"termid":"GO:0030382"}


id: PR:Q10077
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snt2 gene.","definition_xrefs":["UniProtKB:Q10077","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lid2 complex component snt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.12c","synonyms":[{"name":"Lid2C component snt2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snt2","type":"exact"}],"termid":"PR:Q10077"}


id: PBO:0049571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 8","termid":"PBO:0049571"}


id: PBO:0005468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase Rrg1 (predicted)","termid":"PBO:0005468"}


id: PR:O59748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsc1 gene.","definition_xrefs":["UniProtKB:O59748","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD kinase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.13","synonyms":[{"name":"CTD kinase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTDK-I subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsc1","type":"exact"},{"name":"latrunculin sensitive cyclin knockout protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59748"}


id: MONDO:1010110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperphosphatemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperphosphatemia, non-human animal","secondary_identifiers":["OMIA:002052"],"termid":"MONDO:1010110","xrefs":{"Monarch":{"xref_id":"1010110"}}}


id: MONDO:0010278
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86899],"is_not":false,"summary":null,"term":"MONDO:0010278"}]},"cv_name":"mondo","definition":"A very rare form of syndromic intellectual deficit characterized by microcephaly, severe developmental delay or regression, hypotonia, abnormal movements, and early-onset seizures.","definition_xrefs":["Orphanet:85278"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked cerebellar ataxia","termid":"MONDO:0016612"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"is_obsolete":false,"name":"Christianson syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:394455","DOID:0060825","ICD9:759.89","MESH:C567484","OMIM:300243","SCTID:702354007","UMLS:C2678194","GARD:10572"],"synonyms":[{"name":"Angelman-like syndrome X-linked","type":"related"},{"name":"Angelman-like syndrome, X-linked","type":"related"},{"name":"Christianson syndrome","type":"exact"},{"name":"MRXS Christianson","type":"related"},{"name":"MRXSCH","type":"exact"},{"name":"X-linked Angelman-like syndrome","type":"exact"},{"name":"X-linked intellectual disability - craniofacial dysmorphism - epilepsy - ophthalmoplegia - cerebellar atrophy","type":"related"},{"name":"X-linked intellectual disability, South African type","type":"exact"},{"name":"X-linked intellectual disability-craniofacial dysmorphism-epilepsy-ophthalmoplegia-cerebellar atrophy syndrome","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Christianson type","type":"exact"},{"name":"intellectual disability X-linked syndromic Christianson type","type":"related"},{"name":"intellectual disability microcephaly epilepsy and ataxia syndrome","type":"related"},{"name":"intellectual disability, X-linked syndromic, Christianson type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Christianson type","type":"related"},{"name":"intellectual disability, microcephaly, epilepsy, and ataxia syndrome","type":"exact"},{"name":"mental retardation, X-linked syndromic, Christianson type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Christianson type","type":"related"},{"name":"mental retardation, microcephaly, epilepsy, and ataxia syndrome","type":"exact"}],"termid":"MONDO:0010278","terms_by_termid":{"MONDO:0010278":null},"xrefs":{"Monarch":{"xref_id":"0010278"}}}


id: PBO:0045489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSCR4 intronic transcript 1","termid":"PBO:0045489"}


id: PBO:0088353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tyrosine-tRNA ligase Yrs1","termid":"PBO:0088353"}


id: PBO:0034421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_morphogenesis_of","termid":"PBO:0034421"}


id: PBO:0081335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 134","termid":"PBO:0081335"}


id: GO:1902542
data:
  {"annotated_genes":["SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to mitotic spindle pole body.","definition_xrefs":["PMID:22809626","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"regulates","term_name":"protein localization to mitotic spindle pole body","termid":"GO:1902440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to mitotic spindle pole body","type":"exact"}],"termid":"GO:1902542","terms_by_termid":{"GO:1902543":null}}


id: GO:0052197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont defense response (obsolete GO:0052197)","synonyms":[{"name":"activation by host of symbiont defense response","type":"narrow"},{"name":"stimulation by host of symbiont defense response","type":"narrow"},{"name":"up regulation by host of symbiont defense response","type":"exact"},{"name":"up-regulation by host of symbiont defense response","type":"exact"},{"name":"upregulation by host of symbiont defense response","type":"exact"}],"termid":"GO:0052197"}


id: MONDO:0010050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spastic pseudosclerosis (obsolete MONDO:0010050)","secondary_identifiers":["MESH:C563024","OMIM:270900"],"synonyms":[{"name":"corticopallidodegeneration","type":"related"},{"name":"disseminated encephalomyelopathy","type":"related"},{"name":"spastic pseudosclerosis","type":"exact"}],"termid":"MONDO:0010050","xrefs":{"Monarch":{"xref_id":"0010050"}}}


id: PBO:0027371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_disulfide_oxidoreductase_activity","termid":"PBO:0027371"}


id: MONDO:0013528
data:
  {"annotated_genes":["SJAG_02717"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86271],"is_not":false,"summary":null,"term":"MONDO:0013528"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the TECR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22549","OMIM:614020","UMLS:C3151462","MEDGEN:462812","DOID:0081188"],"synonyms":[{"name":"MRT14","type":"related"},{"name":"TECR autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in TECR","type":"exact"},{"name":"intellectual disability, autosomal recessive 14","type":"exact"},{"name":"intellectual disability, autosomal recessive type 14","type":"exact"},{"name":"mental retardation, autosomal recessive 14","type":"related"},{"name":"mental retardation, autosomal recessive type 14","type":"exact"}],"termid":"MONDO:0013528","terms_by_termid":{"MONDO:0013528":null},"xrefs":{"Monarch":{"xref_id":"0013528"}}}


id: PBO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORF in compositionally biased region","termid":"PBO:0000497"}


id: PBO:0054300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1691","termid":"PBO:0054300"}


id: PBO:0039572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 66","termid":"PBO:0039572"}


id: PBO:0059231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L2 pseudogene 1","termid":"PBO:0059231"}


id: GO:0120282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume that is enclosed within the autolysosome single-membrane.","definition_xrefs":["GOC:krc","GOC:nhn","PMID:26382870","PMID:24657946","PMID:32047650","PMID:17182262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"autolysosome","termid":"GO:0044754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"autolysosome lumen","termid":"GO:0120282"}


id: GO:0033132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hexokinase activity","termid":"GO:1903300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucokinase activity","synonyms":[{"name":"down regulation of glucokinase activity","type":"exact"},{"name":"down-regulation of glucokinase activity","type":"exact"},{"name":"downregulation of glucokinase activity","type":"exact"},{"name":"glucokinase inhibitor","type":"narrow"},{"name":"inhibition of glucokinase activity","type":"narrow"}],"termid":"GO:0033132"}


id: PBO:0068741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 4, pseudogene","termid":"PBO:0068741"}


id: GO:0016217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deethylsimazine + H2O = N-ethylammeline + chloride + H+.","definition_xrefs":["MetaCyc:R465-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-ethylammeline chlorohydrolase activity","termid":"GO:0016217"}


id: MONDO:0956962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell benign neoplasm that derives from mature tissue elements or a limited amount of immature tissue elements.","definition_xrefs":["DOID:0080602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell benign neoplasm","termid":"MONDO:0850144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign teratoma","secondary_identifiers":["UMLS:C1879828","NCIT:C67107","MEDGEN:361206"],"termid":"MONDO:0956962","xrefs":{"Monarch":{"xref_id":"0956962"}}}


id: MONDO:0010651
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85778],"is_not":false,"summary":null,"term":"MONDO:0010651"}]},"cv_name":"mondo","definition":"A usually severe multisystemic disorder of copper metabolism, characterized by progressive neurodegeneration and marked connective tissue anomalies as well as typical sparse abnormal steely hair.","definition_xrefs":["Orphanet:565"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic hair shaft abnormality (obsolete MONDO:0019282)","termid":"MONDO:0019282"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes structural anomaly (obsolete MONDO:0020189)","termid":"MONDO:0020189"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"disorder of copper metabolism","termid":"MONDO:0017762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Menkes disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D007706","ICD9:759.89","GARD:1521","MEDGEN:44030","NANDO:1200653","NORD:1440","icd11.foundation:986728180","NANDO:2200580","NCIT:C75486","OMIM:309400","SCTID:59178007","DOID:1838","MedDRA:10027294","UMLS:C0022716"],"synonyms":[{"name":"MD","type":"exact"},{"name":"MNK","type":"exact"},{"name":"Menkea syndrome","type":"related"},{"name":"Menkes disease","type":"exact"},{"name":"Menkes kinky hair syndrome","type":"exact"},{"name":"Menkes kinky-hair syndrome","type":"exact"},{"name":"Menkes syndrome","type":"exact"},{"name":"Mk","type":"exact"},{"name":"Trichopoliodystrophy","type":"exact"},{"name":"X-linked copper deficiency","type":"exact"},{"name":"copper transport disease","type":"broad"},{"name":"kinky hair disease","type":"exact"},{"name":"kinky hair syndrome","type":"exact"},{"name":"menkes disease, X-linked recessive","type":"exact"},{"name":"steely hair disease","type":"exact"},{"name":"steely hair syndrome","type":"exact"}],"termid":"MONDO:0010651","terms_by_termid":{"MONDO:0010651":null},"xrefs":{"Monarch":{"xref_id":"0010651"}}}


id: PBO:0029292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_Mei2_nuclear_dot","termid":"PBO:0029292"}


id: PBO:0070282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 23","termid":"PBO:0070282"}


id: GO:0097194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A stage of the apoptotic process that starts with the controlled breakdown of the cell through the action of effector caspases or other effector molecules (e.g. cathepsins, calpains etc.). Key steps of the execution phase are rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.","definition_xrefs":["GOC:mtg_apoptosis","PMID:21760595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"execution phase of apoptosis","secondary_identifiers":["Reactome:R-HSA-75153"],"synonyms":[{"name":"apoptosis","type":"narrow"},{"name":"execution phase of apoptotic process","type":"exact"}],"termid":"GO:0097194"}


id: MONDO:0019711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with predominant vertebral and costal involvement (obsolete MONDO:0019711)","secondary_identifiers":["icd11.foundation:395969787","Orphanet:93454"],"termid":"MONDO:0019711","xrefs":{"Monarch":{"xref_id":"0019711"}}}


id: MONDO:0024495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"general tumor grading characteristic","termid":"MONDO:0024489"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 1 or 2, general grading system","synonyms":[{"name":"grade 1/2","type":"exact"}],"termid":"MONDO:0024495","xrefs":{"Monarch":{"xref_id":"0024495"}}}


id: FYPO:0007762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphatidate cytidylyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal phosphatidate cytidylyltransferase activity","synonyms":[{"name":"abnormal CDP-diacylglycerol synthase activity","type":"exact"}],"termid":"FYPO:0007762"}


id: GO:0140435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to a meiotic spindle pole body.","definition_xrefs":["PMID:22438582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of protein localization to meiotic spindle pole body","termid":"GO:0140433"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to spindle pole body","termid":"GO:1902364"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"protein localization to meiotic spindle pole body","termid":"GO:1902441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to meiotic spindle pole body","termid":"GO:0140435"}


id: PBO:0075977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 3","termid":"PBO:0075977"}


id: PBO:0075180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 10","termid":"PBO:0075180"}


id: MONDO:0015624
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334","SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86817,86818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[87146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital isolated hyperinsulinism","termid":"MONDO:0019010"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03266":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"diazoxide-sensitive diffuse hyperinsulinism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5679570","GARD:20067","Orphanet:165985","MEDGEN:1842739"],"synonyms":[{"name":"hyperinsulinemic hypoglycemia, diazoxide-sensitive diffuse form","type":"exact"}],"termid":"MONDO:0015624","terms_by_termid":{"MONDO:0011236":null,"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0015624"}}}


id: PBO:0111877
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDR subfamily","termid":"PBO:0111877"}


id: PBO:0003298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit Dps1","termid":"PBO:0003298"}


id: GO:2000901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cyclodextrin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"dextrin catabolic process","termid":"GO:1901027"},{"relation_name":"is_a","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cyclodextrin catabolic process","synonyms":[{"name":"cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000901"}


id: SO:0001884
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_translocation","termid":"SO:0001881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_translocation","synonyms":[{"name":"regulatory region translocation","type":"exact"}],"termid":"SO:0001884"}


id: PBO:0089330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain-containing protein Tlc4","termid":"PBO:0089330"}


id: PBO:0030431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_eisosome_filament","termid":"PBO:0030431"}


id: GO:0021988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the olfactory lobe over time from its initial formation until its mature state. The olfactory lobe is the area of the brain that process the neural inputs for the sense of smell.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory lobe development","termid":"GO:0021988"}


id: GO:0003983
data:
  {"annotated_genes":["SJAG_01089","SJAG_02178"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72887,80372],"is_not":false,"summary":null,"term":"GO:0003983"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + UTP = diphosphate + UDP-D-glucose.","definition_xrefs":["EC:2.7.7.9","RHEA:19889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"UTP:glucose-1-phosphate uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70286","KEGG_REACTION:R00289","MetaCyc:GLUC1PURIDYLTRANS-RXN"],"synonyms":[{"name":"UDP glucose pyrophosphorylase activity","type":"related"},{"name":"UDP-glucose diphosphorylase activity","type":"related"},{"name":"UDP-glucose pyrophosphorylase activity","type":"related"},{"name":"UDPG phosphorylase activity","type":"related"},{"name":"UDPG pyrophosphorylase activity","type":"related"},{"name":"UTP-glucose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:alpha-D-glucose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"glucose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"uridine 5'-diphosphoglucose pyrophosphorylase activity","type":"related"},{"name":"uridine diphosphate-D-glucose pyrophosphorylase activity","type":"related"},{"name":"uridine diphosphoglucose pyrophosphorylase activity","type":"related"},{"name":"uridine-diphosphate glucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0003983","terms_by_termid":{"GO:0003983":null}}


id: MONDO:0011593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"},{"relation_name":"is_a","term_name":"PRRT2-associated paroxysmal movement disorder","termid":"MONDO:0100556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 2","secondary_identifiers":["OMIM:605751","MEDGEN:381313","GARD:16504","DOID:0081115","UMLS:C1853995","MESH:C565296"],"synonyms":[{"name":"BFIS2","type":"related"},{"name":"convulsions, benign familial infantile, 2","type":"related"},{"name":"seizures, benign familial infantile, 2","type":"exact"},{"name":"seizures, benign familial infantile, type 2","type":"exact"}],"termid":"MONDO:0011593","xrefs":{"Monarch":{"xref_id":"0011593"}}}


id: GO:0046933
data:
  {"annotated_genes":["SJAG_00133","SJAG_04122","SJAG_MIT15","SJAG_07003","SJAG_02564","SJAG_00438","SJAG_02598","SJAG_MIT09","SJAG_00836","SJAG_03925","SJAG_00542","SJAG_00985","SJAG_02105","SJAG_00915","SJAG_03114","SJAG_05204","SJAG_MIT37"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57847,70246,70401,73114,75893,78158,78364,79540,93609,94195,95172,102139,108129,108221,119394,119400,119407],"is_not":false,"summary":null,"term":"GO:0046933"}]},"cv_name":"molecular_function","definition":"Enables the synthesis of ATP from ADP and phosphate by the transfer of protons from one side of a membrane to the other by a rotational mechanism driven by a gradient according to the reaction: ADP + H2O + phosphate + H+(in) -> ATP + H+(out).","definition_xrefs":["RHEA:57722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton channel activity","termid":"GO:0015252"},{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0022857","GO:0003674","GO:0003824","GO:0005215"],"is_obsolete":false,"name":"proton-transporting ATP synthase activity, rotational mechanism","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-164832","TC:3.A.2.1.1"],"synonyms":[{"name":"H+-transporting ATP synthase activity","type":"related"},{"name":"hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"}],"termid":"GO:0046933","terms_by_termid":{"GO:0046933":null}}


id: MONDO:0030727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 101","secondary_identifiers":["DOID:0070387","OMIM:619814","UMLS:C5676955","MEDGEN:1805172"],"synonyms":[{"name":"DEE101","type":"exact"},{"name":"developmental and epileptic encephalopathy 101","type":"exact"}],"termid":"MONDO:0030727","xrefs":{"Monarch":{"xref_id":"0030727"}}}


id: PBO:0016889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug121","termid":"PBO:0016889"}


id: GO:0006731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme and prosthetic group metabolic process (obsolete GO:0006731)","synonyms":[{"name":"coenzyme and prosthetic group metabolic process","type":"exact"}],"termid":"GO:0006731"}


id: MONDO:1011060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, sheep","secondary_identifiers":["OMIA:000807-9940"],"termid":"MONDO:1011060","xrefs":{"Monarch":{"xref_id":"1011060"}}}


id: SO:1000086
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that causes a decrease in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000086 sequence_variation_decreasing_level_of_transcript (obsolete SO:1000086)","synonyms":[{"name":"mutation decreasing level of transcript","type":"exact"},{"name":"sequence variation decreasing level of transcript","type":"related"}],"termid":"SO:1000086"}


id: PBO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit, Spc105/KNL-1 family member, blinkin, Spc7","termid":"PBO:0018138"}


id: MONDO:0016967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 17","termid":"MONDO:0016935"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 17","secondary_identifiers":["icd11.foundation:1871996278","MEDGEN:1826032","GARD:20887","Orphanet:262968","UMLS:C5679698"],"synonyms":[{"name":"17q duplication","type":"related"},{"name":"17q trisomy","type":"related"},{"name":"Duplication 17q","type":"related"},{"name":"chromosome 17q duplication","type":"related"},{"name":"partial duplication of chromosome 17q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 17","type":"exact"},{"name":"partial trisomy 17q","type":"related"},{"name":"partial trisomy of chromosome 17q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 17","type":"exact"},{"name":"trisomy 17q","type":"related"}],"termid":"MONDO:0016967","xrefs":{"Monarch":{"xref_id":"0016967"}}}


id: PBO:0050263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 41","termid":"PBO:0050263"}


id: PR:O14095
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin domain-containing protein 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21148:SF11","OMA:SCHPO01642","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein plp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.12c","secondary_identifiers":["UniProtKB:O14095"],"synonyms":[{"name":"Spom972h-TXNDC9","type":"exact"},{"name":"phosducin-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14095"}


id: GO:0000253
data:
  {"annotated_genes":["SJAG_03235"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71251],"is_not":false,"summary":null,"term":"GO:0000253"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-betahydroxyl sterol + NADP+ = a 3-oxosterol sterol + NADPH + H+.","definition_xrefs":["EC:1.1.1.270","PMID:9811880","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-13686","RHEA:34787","Reactome:R-HSA-194632","GO:0050576","Reactome:R-HSA-194689"],"synonyms":[{"name":"3-KSR activity","type":"related"},{"name":"3-keto sterol reductase activity","type":"exact"},{"name":"3-keto-steroid reductase activity","type":"exact"},{"name":"3beta-hydroxy-steroid:NADP+ 3-oxidoreductase","type":"related"}],"termid":"GO:0000253","terms_by_termid":{"GO:0000253":null}}


id: GO:0075062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont invasive hypha formation within host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invasive hypha growth (obsolete GO:0075062)","synonyms":[{"name":"regulation of symbiont invasive hypha formation in host","type":"exact"},{"name":"regulation of symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0075062"}


id: GO:0070275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The metabolic process in which ammonia (NH3) is oxidized to nitrite (NO2) in the presence of oxygen. Hydroxylamine is produced enzymatically, and, in the presence of pyruvate, forms pyruvic oxime in a spontaneous, non-enzymatic reaction; pyruvic oxime is then converted to nitrite.","definition_xrefs":["MetaCyc:PWY-2242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia oxidation","termid":"GO:0019329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aerobic ammonia oxidation to nitrite via pyruvic oxime","termid":"GO:0070275"}


id: FYPO:0002417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores and germinated spores with elongated germ tubes. The elongated cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores and germinated spores with elongated germ tubes (obsolete FYPO:0002417)","termid":"FYPO:0002417"}


id: MONDO:0017471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital patella dislocation","secondary_identifiers":["SCTID:205067002","GARD:9692","MESH:C538081","icd11.foundation:1383302301","UMLS:C0345360","MEDGEN:91041","Orphanet:295036"],"synonyms":[{"name":"congenital dislocation of the patella","type":"related"},{"name":"congenital patellar dislocation","type":"related"}],"termid":"MONDO:0017471","xrefs":{"Monarch":{"xref_id":"0017471"}}}


id: SO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from nuclear sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"nuclear_sequence","termid":"SO:0000738"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Nuclear_gene"],"synonyms":[{"name":"nuclear gene","type":"exact"}],"termid":"SO:0000087"}


id: MOD:01627
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms L-cysteinyl-L-selenocysteine either by the natural process of cross-linking an L-cysteine residue and an L-selenocysteine residue, or by the hypothetical process of substituting a selenium for a sulfur atom in cystine.","definition_xrefs":["PubMed:12911312","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-selenocysteine","termid":"MOD:01627"}


id: PBO:0041760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping actin protein, gelsolin like","termid":"PBO:0041760"}


id: GO:0062108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to a non-growing cell tip.","definition_xrefs":["PMID:18328707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to non-growing cell tip","termid":"GO:0062107"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell tip","termid":"GO:1903067"},{"relation_name":"negatively_regulates","term_name":"protein localization to non-growing cell tip","termid":"GO:1902487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to non-growing cell tip","termid":"GO:0062108"}


id: PR:Q09886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug42 gene.","definition_xrefs":["UniProtKB:Q09886","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 42 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.12","synonyms":[{"name":"Spom972h-mug42","type":"exact"}],"termid":"PR:Q09886"}


id: PATO:0000355
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000355 enzyme composition value (obsolete PATO:0000355)","termid":"PATO:0000355"}


id: PR:P40377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02759","PANTHER:PTHR11630:SF44","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.04c","secondary_identifiers":["UniProtKB:P40377"],"synonyms":[{"name":"Spom972h-MCM2","type":"exact"},{"name":"cell division control protein 19 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40377"}


id: MONDO:0020830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diaphragm disorder","termid":"MONDO:0005728"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmitis","secondary_identifiers":["MEDGEN:507638","icd11.foundation:1124735890","SCTID:73160007","UMLS:C0011985"],"synonyms":[{"name":"diaphragmatitis","type":"exact"},{"name":"diaphragmitis","type":"exact"}],"termid":"MONDO:0020830","xrefs":{"Monarch":{"xref_id":"0020830"}}}


id: PBO:0084517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm ZK616.6/EMC-4 and fly CG11137; mutation is functionally complemented by human EMC4","termid":"PBO:0084517"}


id: PBO:0088694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32","termid":"PBO:0088694"}


id: PBO:0017023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR33","termid":"PBO:0017023"}


id: GO:1903361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, basolateral regions of the plasma membrane.","definition_xrefs":["GO_REF:0000087","GOC:kmv","GOC:TermGenie","PMID:24785082","PMID:9425351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to basolateral plasma membrane","secondary_identifiers":["GO:0061467"],"synonyms":[{"name":"basolateral protein localization","type":"exact"},{"name":"protein localisation in basolateral plasma membrane","type":"exact"},{"name":"protein localisation to basolateral plasma membrane","type":"exact"},{"name":"protein localization in basolateral plasma membrane","type":"exact"}],"termid":"GO:1903361"}


id: GO:0046676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of insulin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of insulin secretion","termid":"GO:0050796"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"insulin secretion","termid":"GO:0030073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of insulin secretion","secondary_identifiers":["Reactome:R-HSA-400042"],"synonyms":[{"name":"down regulation of insulin secretion","type":"exact"},{"name":"down-regulation of insulin secretion","type":"exact"},{"name":"downregulation of insulin secretion","type":"exact"},{"name":"inhibition of insulin secretion","type":"narrow"}],"termid":"GO:0046676"}


id: PBO:0087072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L35B; homologous to mammalian ribosomal protein L35 and bacterial L29; RPL35B has a paralog, RPL35A, that arose from the whole genome duplication","termid":"PBO:0087072"}


id: PBO:0049769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 7","termid":"PBO:0049769"}


id: PBO:0091419
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ELOVL7","termid":"PBO:0091419"}


id: PBO:0070252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 195 pseudogene","termid":"PBO:0070252"}


id: GO:0052618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + L-glutamate + factor F420-0 = GDP + H+ + factor gamma-F420-1 + phosphate.","definition_xrefs":["MetaCyc:RXN-8080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme F420-0 gamma-glutamyl ligase activity","termid":"GO:0043773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"coenzyme F420-0:L-glutamate ligase activity","secondary_identifiers":["RHEA:30555","EC:6.3.2.31"],"termid":"GO:0052618"}


id: MONDO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Age-related neuropathological condition with severe neuronal cell loss and gliosis in the hippocampus","definition_xrefs":["EFO:0005678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocampal sclerosis of aging","secondary_identifiers":["MEDGEN:1801569","UMLS:C5691287"],"termid":"MONDO:0005544","xrefs":{"Monarch":{"xref_id":"0005544"}}}


id: PR:Q9P6R5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12886:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.05","secondary_identifiers":["UniProtKB:Q9P6R5"],"synonyms":[{"name":"GPI mannosyltransferase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC13E7.05","type":"related"},{"name":"Spom972h-PIGM","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6R5"}


id: PBO:0082488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalase A; breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1p) during fatty acid beta-oxidation","termid":"PBO:0082488"}


id: PBO:0084182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone for Htz1p/H2A-H2B dimer; required for the stabilization of the Chz1p-Htz1-H2B complex; has overlapping function with Nap1p; null mutant displays weak sensitivity to MMS and benomyl; contains a highly conserved CHZ motif; protein abundance increases in response to DNA replication stress","termid":"PBO:0084182"}


id: PR:P87128
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit J that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21681:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit J (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.13c","secondary_identifiers":["UniProtKB:P87128"],"synonyms":[{"name":"Spom972h-EIF3J","type":"exact"},{"name":"eIF-3 30 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3j (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 30 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87128"}


id: GO:0018660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-hydroxyphenylacetate + NADH + H+ + O2 = 3,4-dihydroxyphenylacetate + NAD+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxyphenylacetate,NADH:oxygen oxidoreductase (3-hydroxylating) activity (obsolete GO:0018660)","synonyms":[{"name":"4 HPA 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxyphenylacetate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxyphenylacetate 3-monooxygenase activity","type":"broad"},{"name":"p-hydroxyphenylacetate 3-hydroxylase activity","type":"broad"},{"name":"p-hydroxyphenylacetate hydroxylase activity","type":"broad"}],"termid":"GO:0018660"}


id: PBO:0111917
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI domain","termid":"PBO:0111917"}


id: PBO:0011087
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae URA1","termid":"PBO:0011087"}


id: PBO:0004361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spo4-Spo6 kinase complex regulatory subunit Spo6","termid":"PBO:0004361"}


id: MONDO:1012411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"compulsive disorder, non-human animal","termid":"MONDO:1011636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compulsive disorder, dog","secondary_identifiers":["OMIA:001530-9615"],"termid":"MONDO:1012411","xrefs":{"Monarch":{"xref_id":"1012411"}}}


id: SO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","definition_xrefs":["NCBI:th","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_alteration","termid":"SO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation","synonyms":[{"name":"transchr","type":"related"},{"name":"translocated sequence","type":"exact"}],"termid":"SO:0000199"}


id: FYPO:0007614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal transcription from STREP promoter","synonyms":[{"name":"normal transcription from STREP promoter during mitotic cell cycle","type":"related"},{"name":"normal transcription from STREP promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007614"}


id: PBO:0044741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 19B","termid":"PBO:0044741"}


id: GO:0000961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving catabolism in the mitochondrion of RNA transcribed from the mitochondrial genome.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial RNA catabolic process","termid":"GO:0000960"},{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"negatively_regulates","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial RNA catabolic process","termid":"GO:0000961"}


id: MONDO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urogenital tuberculosis involving a pathogenic inflammatory response in the fallopian tube.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingitis","termid":"MONDO:0003619"},{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous salpingitis","secondary_identifiers":["ICD9:016.6","ICD9:016.60","MEDGEN:546960","SCTID:49558004","icd11.foundation:25239933","UMLS:C0275933","DOID:0050166"],"synonyms":[{"name":"fallopian tube tuberculosis","type":"related"}],"termid":"MONDO:0000271","xrefs":{"Monarch":{"xref_id":"0000271"}}}


id: MOD:00078
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N(omega)-methyl-L-arginine.","definition_xrefs":["PubMed:15835918","PubMed:5128665","RESID:AA0069","PubMed:2426402","PubMed:11875433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"omega-N-methyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-[(imino(methylamino)methyl)amino]pentanoic acid","type":"exact"},{"name":"MOD_RES Omega-N-methylarginine","type":"exact"},{"name":"MOD_RES Omega-N-methylated arginine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"NG-methylarginine","type":"exact"},{"name":"NoMeArg","type":"exact"},{"name":"omega-N-methyl-L-arginine","type":"exact"},{"name":"omega-N-methylated L-arginine","type":"exact"}],"termid":"MOD:00078"}


id: PBO:0086705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mCherry fusion protein localizes to the cytosol","termid":"PBO:0086705"}


id: PBO:0003679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L26 (predicted)","termid":"PBO:0003679"}


id: PBO:0065129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKG1 antisense RNA 1","termid":"PBO:0065129"}


id: GO:1903786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"regulation of glutathione biosynthetic process","synonyms":[{"name":"regulation of glutathione anabolism","type":"exact"},{"name":"regulation of glutathione biosynthesis","type":"exact"},{"name":"regulation of glutathione formation","type":"exact"},{"name":"regulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903786"}


id: PBO:0082374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor (ATF/CREB1 homolog); regulates the unfolded protein response, via UPRE binding, and membrane biogenesis; ER stress-induced splicing pathway triggers efficient Hac1p translation; two functional forms of Hac1p are produced; translation initiation is repressed under non-stress conditions; protein abundance increases in response to DNA replication stress","termid":"PBO:0082374"}


id: GO:0052866
data:
  {"annotated_genes":["SJAG_03248","SJAG_03375","SJAG_02289","SJAG_00063","SJAG_02706","SJAG_00880","SJAG_03131","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016314"},{"annotations":[108625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"},{"annotations":[74029,74159,75339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043813"},{"annotations":[65681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004438"},{"annotations":[75809,74162,75342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004439"},{"annotations":[78522,74143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol phosphate(n) + H2O = phosphatidylinositol phosphate(n-1) + phosphate. This reaction is the removal of a phosphate group from a phosphatidylinositol phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_00880":null,"SJAG_02289":null,"SJAG_02706":null,"SJAG_03131":null,"SJAG_03248":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphoinositide phosphatase activity","type":"exact"}],"termid":"GO:0052866","terms_by_termid":{"GO:0004438":null,"GO:0004439":null,"GO:0016314":null,"GO:0034485":null,"GO:0043812":null,"GO:0043813":null}}


id: PBO:0052844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 3-4, pseudogene","termid":"PBO:0052844"}


id: PBO:0061630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 13","termid":"PBO:0061630"}


id: GO:0002776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an antimicrobial peptide from a cell or a tissue. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["PMID:15638771","ISBN:0781735149","PMID:11807545","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"},{"relation_name":"part_of","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0010467"],"is_obsolete":false,"name":"antimicrobial peptide secretion","termid":"GO:0002776"}


id: MONDO:0007574
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85971,85972],"is_not":false,"summary":null,"term":"MONDO:0007574"}]},"cv_name":"mondo","definition":"A subtype of autosomal dominant cerebellar ataxia type I (ADCA type I), characterized by papulosquamous, ichthyosiform plaques on the limbs appearing shortly after birth and later manifestations including progressive ataxia, dysarthria, nystagmus and decreased reflexes.","definition_xrefs":["Orphanet:1955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratoderma","termid":"MONDO:0019270"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 34","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1105","OMIM:133190","UMLS:C1851481","GARD:59","SCTID:719255000","DOID:0050981","MESH:C535738","MEDGEN:338703"],"synonyms":[{"name":"Erythrokeratodermia with Ataxia","type":"exact"},{"name":"Giroux Barbeau syndrome","type":"related"},{"name":"SCA34","type":"exact"},{"name":"erythrokeratodermia - ataxia","type":"related"},{"name":"erythrokeratodermia with ataxia","type":"exact"},{"name":"spinocerebellar ataxia 34","type":"related"},{"name":"spinocerebellar ataxia and erythrokeratodermia","type":"exact"},{"name":"spinocerebellar ataxia type 34","type":"exact"}],"termid":"MONDO:0007574","terms_by_termid":{"MONDO:0007574":null},"xrefs":{"Monarch":{"xref_id":"0007574"}}}


id: MONDO:0001117
data:
  {"annotated_genes":["SJAG_03929","SJAG_04217","SJAG_00235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009606"},{"annotations":[85864,85865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009605"}]},"cv_name":"mondo","definition":"An inherited or acquired condition characterized by abnormally increased levels of methemoglobin in the blood.","definition_xrefs":["NCIT:C34817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobinopathy","termid":"MONDO:0044348"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_03929":null,"SJAG_04217":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"methemoglobinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6339","UMLS:C0025637","SCTID:38959009","MESH:D008708","MedDRA:10027496","DOID:10783","ICD9:289.7"],"synonyms":[{"name":"methemoglobinemias","type":"exact"}],"termid":"MONDO:0001117","terms_by_termid":{"MONDO:0009605":null,"MONDO:0009606":null},"xrefs":{"Monarch":{"xref_id":"0001117"}}}


id: PBO:0053580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 603","termid":"PBO:0053580"}


id: PR:O94290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf29 gene.","definition_xrefs":["UniProtKB:O94290","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component ist3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.05c","synonyms":[{"name":"RNA-binding protein cwf29 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cwf29","type":"exact"},{"name":"complexed with cdc5 protein 29 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94290"}


id: GO:0035163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell derived from the embryonic head mesoderm acquires the specialized features of a mature hemocyte. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["PMID:14602069","GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemocyte differentiation","termid":"GO:0042386"},{"relation_name":"part_of","term_name":"embryonic hemopoiesis","termid":"GO:0035162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic hemocyte differentiation","synonyms":[{"name":"embryonic arthropod blood cell differentiation","type":"exact"},{"name":"embryonic hemocyte cell differentiation","type":"exact"}],"termid":"GO:0035163"}


id: PBO:0089220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-like protein involved in autophagy Clg1","termid":"PBO:0089220"}


id: GO:0070456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactose-1-phosphate + H2O = galactose + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"galactose-1-phosphate phosphatase activity","termid":"GO:0070456"}


id: GO:0005685
data:
  {"annotated_genes":["SJAG_01870","SJAG_02279","SJAG_05009","SJAG_02304","SJAG_03983","SJAG_01440","SJAG_04163","SJAG_00474","SJAG_00058","SJAG_04911","SJAG_01654","SJAG_01015","SJAG_03469","SJAG_00147","SJAG_01301","SJAG_04214","SJAG_02843"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70390,70808,73050,73484,74385,74466,76016,77030,77137,77427,79653,79883,94323,103029,107265,112697,113606],"is_not":false,"summary":null,"term":"GO:0005685"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U1, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U1 snRNP, most of which remain associated with the U1 snRNA both while the U1 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:krc","ISBN:0879695897","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00474":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"U1 snRNP","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"snRNP U1","type":"exact"}],"termid":"GO:0005685","terms_by_termid":{"GO:0005685":null}}


id: GO:0034201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oleic acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oleic acid","synonyms":[{"name":"response to oleate","type":"exact"}],"termid":"GO:0034201"}


id: PBO:0005756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15 (predicted)","termid":"PBO:0005756"}


id: GO:0071475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic salinity response","termid":"GO:0042538"},{"relation_name":"is_a","term_name":"cellular response to salt stress","termid":"GO:0071472"},{"relation_name":"is_a","term_name":"cellular hyperosmotic response","termid":"GO:0071474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hyperosmotic salinity response","synonyms":[{"name":"cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:0071475"}


id: GO:0061911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amphisomes fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. Fusion provides an acidic environment and digestive function to the interior of the amphisome.","definition_xrefs":["PMID:24219988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0016192","GO:0006914"],"is_obsolete":false,"name":"amphisome-lysosome fusion","termid":"GO:0061911"}


id: FYPO:0006075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature 25S rRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mature rRNA level","termid":"FYPO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased mature 25S rRNA level","synonyms":[{"name":"increased 25S rRNA level","type":"broad"},{"name":"increased mature 25S rRNA accumulation","type":"related"},{"name":"increased mature 25S rRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature 25S rRNA level during vegetative growth","type":"exact"},{"name":"increased mature 25S rRNA transcript level","type":"exact"}],"termid":"FYPO:0006075"}


id: PBO:0067827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 129","termid":"PBO:0067827"}


id: MONDO:0004552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cervical squamous cell carcinoma with minimal stromal invasion. The risk of lymph node metastasis is low.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical squamous cell carcinoma","termid":"MONDO:0006143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"microinvasive cervical squamous cell carcinoma","secondary_identifiers":["MEDGEN:272565","NCIT:C36094","DOID:8409","UMLS:C1333370"],"synonyms":[{"name":"early invasive cervical squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004552","xrefs":{"Monarch":{"xref_id":"0004552"}}}


id: PBO:0043417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCHC-type zinc finger nucleic acid binding protein","termid":"PBO:0043417"}


id: GO:1902621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of an actomyosin contractile ring into its constituent components.","definition_xrefs":["PMID:14602073","PMID:22891673"],"gene_count":0,"genotype_count":0,"name":"obsolete actomyosin contractile ring disassembly (obsolete GO:1902621)","termid":"GO:1902621"}


id: PBO:0058132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4433a","termid":"PBO:0058132"}


id: FYECO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which calcium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Ca ions","synonyms":[{"name":"Ca ions added","type":"exact"},{"name":"calcium ions added","type":"exact"}],"termid":"FYECO:0000034"}


id: MONDO:0013402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the NRL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 27","secondary_identifiers":["MESH:C563526","ICD10CM:H35.5","GARD:15700","OMIM:613750","MEDGEN:320323","UMLS:C1834329","DOID:0110397"],"synonyms":[{"name":"NRL retinitis pigmentosa","type":"exact"},{"name":"RP27","type":"exact"},{"name":"retinal Degeneration, autosomal recessive, Clumped pigment type","type":"related"},{"name":"retinitis pigmentosa 27","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in NRL","type":"exact"},{"name":"retinitis pigmentosa type 27","type":"exact"}],"termid":"MONDO:0013402","xrefs":{"Monarch":{"xref_id":"0013402"}}}


id: SO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small, ~22-nt, RNA molecule that is the endogenous transcript of a miRNA gene (or the product of other non coding RNA genes). Micro RNAs are produced from precursor molecules (SO:0001244) that can form local hairpin structures, which ordinarily are processed (usually via the Dicer pathway) such that a single miRNA molecule accumulates from one arm of a hairpin precursor molecule. Micro RNAs may trigger the cleavage of their target molecules or act as translational repressors.","definition_xrefs":["PMID:11081512","PMID:12592000"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA","secondary_identifiers":["SO:0000649","http://en.wikipedia.org/wiki/MiRNA","http://en.wikipedia.org/wiki/StRNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:miRNA","type":"exact"},{"name":"micro RNA","type":"exact"},{"name":"microRNA","type":"exact"},{"name":"small temporal RNA","type":"exact"},{"name":"stRNA","type":"exact"}],"termid":"SO:0000276"}


id: MONDO:0033367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 58","secondary_identifiers":["DOID:0080285","GARD:16259","MEDGEN:1646861","OMIM:617830","UMLS:C4693367"],"synonyms":[{"name":"DEE58","type":"exact"},{"name":"EIEE58","type":"exact"},{"name":"developmental and epileptic encephalopathy 58","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 58","type":"exact"},{"name":"infantile epileptic encephalopathy 58","type":"exact"}],"termid":"MONDO:0033367","xrefs":{"Monarch":{"xref_id":"0033367"}}}


id: GO:0061259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the glomerular mesangial cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric mesangial cell differentiation","termid":"GO:0061260"},{"relation_name":"is_a","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangium development","termid":"GO:0061247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell differentiation","termid":"GO:0061259"}


id: MONDO:0957954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 14","secondary_identifiers":["UMLS:C5882718","OMIM:620602","MEDGEN:1851480"],"termid":"MONDO:0957954","xrefs":{"Monarch":{"xref_id":"0957954"}}}


id: PBO:0069300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 556, pseudogene","termid":"PBO:0069300"}


id: PBO:0108705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RanGAP Hba1","termid":"PBO:0108705"}


id: PR:P00332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alcohol dehydrogenase, propanol-preferring that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.01","secondary_identifiers":["UniProtKB:P00332"],"synonyms":[{"name":"Spom972h-adhP","type":"exact"}],"termid":"PR:P00332"}


id: CL:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A cell whose nucleus has two haploid genomes.","definition_xrefs":["FB:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell","termid":"CL:0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diploid cell","termid":"CL:0000415"}


id: PBO:0064778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periplakin","termid":"PBO:0064778"}


id: PBO:0041063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRF1 RNA polymerase III transcription initiation factor subunit","termid":"PBO:0041063"}


id: GO:0035993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the deltoid tuberosity over time, from its formation to the mature structure. The deltoid tuberosity is the region on the shaft of the humerus to which the deltoid muscle attaches. The deltoid tuberosity develops through endochondral ossification in a two-phase process; an initiating tendon-dependent phase, and a muscle-dependent growth phase.","definition_xrefs":["PMID:17567668","UBERON:0002498","Wikipedia:Deltoid_tuberosity","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deltoid tuberosity development","termid":"GO:0035993"}


id: GO:0070252
data:
  {"annotated_genes":["SJAG_00750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033275"}]},"cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of all or part of the cell body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based movement","termid":"GO:0030048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-mediated cell contraction","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070252","terms_by_termid":{"GO:0033275":null}}


id: PBO:0043785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase D","termid":"PBO:0043785"}


id: MONDO:0003505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a femur.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer of long bone of lower limb","termid":"MONDO:0000952"},{"relation_name":"is_a","term_name":"neoplasm of femur","termid":"MONDO:0021579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"femoral cancer","secondary_identifiers":["DOID:5546","UMLS:C2362822","MEDGEN:1843484","SCTID:126583006","MESH:D005266"],"synonyms":[{"name":"cancer of femur","type":"exact"},{"name":"femoral neoplasm","type":"broad"},{"name":"femur cancer","type":"exact"},{"name":"malignant femur neoplasm","type":"exact"},{"name":"malignant neoplasm of femur","type":"exact"},{"name":"neoplasm of femur","type":"broad"}],"termid":"MONDO:0003505","xrefs":{"Monarch":{"xref_id":"0003505"}}}


id: GO:0034877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isonicotinate + acceptor + H2O = 2-hydroxyisonicotinate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinate dehydrogenase activity (obsolete GO:0034877)","termid":"GO:0034877"}


id: MONDO:0005745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the order enoplida.","definition_xrefs":["MESH:D017189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Nematoda infectious disease","termid":"MONDO:0005871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enoplea infectious disease","synonyms":[{"name":"Enoplea caused disease or disorder","type":"exact"},{"name":"Enoplea disease or disorder","type":"exact"}],"termid":"MONDO:0005745","xrefs":{"Monarch":{"xref_id":"0005745"}}}


id: GO:0102799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a glucosinolate = alpha-D-glucose + a thiohydroximate-O-sulfate. Glucosinolates are a subclass of thioglucosides.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete glucosinolate glucohydrolase activity (obsolete GO:0102799)","termid":"GO:0102799"}


id: SO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The last base to be translated into protein. It does not include the stop codon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_end","synonyms":[{"name":"coding end","type":"exact"},{"name":"translation termination site","type":"exact"},{"name":"translation_end","type":"exact"}],"termid":"SO:0000327"}


id: GO:0052038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the directed movement of substances within the cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host intracellular transport","synonyms":[{"name":"modulation by symbiont of host intracellular transport","type":"broad"},{"name":"modulation of host intracellular trafficking","type":"exact"}],"termid":"GO:0052038"}


id: PBO:0057476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 595","termid":"PBO:0057476"}


id: PBO:0072390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 16","termid":"PBO:0072390"}


id: MONDO:0017840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The simple virilizing form of classical congenital adrenal hyperplasia due to 21-hydroxylase deficiency (classical 21 OHD CAH) is characterized by genital ambiguity and virilization of the external genitalia in females, hypocortisolism and precocious pseudopuberty without salt-wasting.","definition_xrefs":["Orphanet:315311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic congenital adrenal hyperplasia due to 21-hydroxylase deficiency","termid":"MONDO:0008728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"classic congenital adrenal hyperplasia due to 21-hydroxylase deficiency, simple virilizing form","secondary_identifiers":["GARD:21399","MEDGEN:1826061","UMLS:C5679895"],"synonyms":[{"name":"classic 21-OHD CAH, simple virilizing form","type":"exact"}],"termid":"MONDO:0017840","xrefs":{"Monarch":{"xref_id":"0017840"}}}


id: FYPO:0004602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of all or part of the linear element is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal linear element morphology","termid":"FYPO:0004602"}


id: PBO:0069847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1133, pseudogene","termid":"PBO:0069847"}


id: PBO:0053636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 682","termid":"PBO:0053636"}


id: MONDO:0060779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi Syndrome caused by exposure to noxious agents.","definition_xrefs":["NCIT:C78296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi renotubular syndrome","termid":"MONDO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acquired Fanconi syndrome","secondary_identifiers":["UMLS:C0341702","MEDGEN:90966","SCTID:236467001"],"synonyms":[{"name":"acquired Fanconi syndrome","type":"exact"}],"termid":"MONDO:0060779","xrefs":{"Monarch":{"xref_id":"0060779"}}}


id: FYPO:0005267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to aluminium ions. Cells stop growing (and may die) at a concentration of aluminium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to aluminium","synonyms":[{"name":"hypersensitive to aluminium","type":"exact"},{"name":"sensitive to aluminium during mitotic cell cycle","type":"related"},{"name":"sensitive to aluminium during vegetative growth","type":"exact"},{"name":"sensitive to aluminium ions","type":"exact"},{"name":"sensitive to aluminum","type":"exact"}],"termid":"FYPO:0005267"}


id: PBO:0068318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 19A, RBR E3 ubiquitin protein ligase","termid":"PBO:0068318"}


id: PBO:0079826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ULK4 pseudogene 1","termid":"PBO:0079826"}


id: PR:Q10350
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cab4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.08","synonyms":[{"name":"Spom972h-cab4","type":"exact"}],"termid":"PR:Q10350"}


id: MONDO:0014360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the NECAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 21","secondary_identifiers":["OMIM:615833","GARD:16017","DOID:0080443","MEDGEN:862867","UMLS:C4014430"],"synonyms":[{"name":"DEE21","type":"exact"},{"name":"EIEE21","type":"exact"},{"name":"NECAP1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 21","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in NECAP1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 21","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 21","type":"exact"}],"termid":"MONDO:0014360","xrefs":{"Monarch":{"xref_id":"0014360"}}}


id: GO:1902734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor-mediated virion attachment to host cell.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18385238","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor-mediated virion attachment to host cell","synonyms":[{"name":"regulation of virion attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:1902734"}


id: PBO:0060889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropilin and tolloid like 1","termid":"PBO:0060889"}


id: GO:0021759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the globus pallidus over time from its initial formation until its mature state. The globus pallidus is one of the basal ganglia involved with control of voluntary movement in the brain.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","ISBN:0878937420","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"globus pallidus development","synonyms":[{"name":"pallidum development","type":"exact"}],"termid":"GO:0021759"}


id: PBO:0051075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 6-6","termid":"PBO:0051075"}


id: MONDO:0013133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial melanoma","termid":"MONDO:0018961"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 5","secondary_identifiers":["UMLS:C2751295","MEDGEN:416516","OMIM:613099"],"synonyms":[{"name":"CMM5","type":"related"},{"name":"melanoma, cutaneous malignant, 5","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 5","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 5","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 5","type":"related"}],"termid":"MONDO:0013133","xrefs":{"Monarch":{"xref_id":"0013133"}}}


id: MONDO:0003189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the middle ear","direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear carcinoma","termid":"MONDO:0003190"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"middle ear adenocarcinoma","secondary_identifiers":["NCIT:C6848","MEDGEN:235326","UMLS:C1334758","DOID:4892"],"synonyms":[{"name":"adenocarcinoma of middle Ear","type":"exact"},{"name":"adenocarcinoma of middle ear","type":"related"},{"name":"adenocarcinoma of the middle Ear","type":"exact"},{"name":"adenocarcinoma of the middle ear","type":"exact"},{"name":"middle Ear adenocarcinoma","type":"exact"},{"name":"middle ear adenocarcinoma","type":"exact"}],"termid":"MONDO:0003189","xrefs":{"Monarch":{"xref_id":"0003189"}}}


id: PBO:0077125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 4","termid":"PBO:0077125"}


id: PBO:0077931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 4","termid":"PBO:0077931"}


id: GO:0015737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which galacturonate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexuronate transmembrane transport","termid":"GO:0015736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"galacturonate transmembrane transport","synonyms":[{"name":"galacturonate transport","type":"related"}],"termid":"GO:0015737"}


id: PBO:0049401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCA1A neighbor","termid":"PBO:0049401"}


id: PBO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen15 (predicted)","termid":"PBO:0002033"}


id: GO:1905480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["PMID:10377385","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glutamate-ammonia ligase activity (obsolete GO:1905480)","synonyms":[{"name":"activation of L-glutamate:ammonia ligase (ADP-forming)","type":"narrow"},{"name":"activation of L-glutamine synthetase activity","type":"narrow"},{"name":"activation of glutamate-ammonia ligase activity","type":"narrow"},{"name":"activation of glutamine synthetase activity","type":"narrow"},{"name":"activation of glutamylhydroxamic synthetase activity","type":"narrow"},{"name":"positive regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"positive regulation of L-glutamine synthetase activity","type":"exact"},{"name":"positive regulation of glutamine synthetase activity","type":"exact"},{"name":"positive regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"up regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"up regulation of L-glutamine synthetase activity","type":"exact"},{"name":"up regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"up regulation of glutamine synthetase activity","type":"exact"},{"name":"up regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"up-regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"up-regulation of L-glutamine synthetase activity","type":"exact"},{"name":"up-regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"up-regulation of glutamine synthetase activity","type":"exact"},{"name":"up-regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"upregulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"upregulation of L-glutamine synthetase activity","type":"exact"},{"name":"upregulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"upregulation of glutamine synthetase activity","type":"exact"},{"name":"upregulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905480"}


id: PBO:0079410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 4","termid":"PBO:0079410"}


id: PBO:0078787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 11-1","termid":"PBO:0078787"}


id: GO:0010373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"negative regulation of gibberellin biosynthetic process","synonyms":[{"name":"negative regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010373"}


id: PBO:0070295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 1","termid":"PBO:0070295"}


id: GO:0120291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that inhibits or decreases the rate of mitotic recombination-dependent replication fork processing. Suppression of recombination at replication forks is necessary to prevent template switching.","definition_xrefs":["GOC:mah","PMID:28586299","PMID:30667359","PMID:31149897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitotic recombination-dependent replication fork processing","termid":"GO:1903221"},{"relation_name":"negatively_regulates","term_name":"mitotic recombination-dependent replication fork processing","termid":"GO:1990426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic recombination-dependent replication fork processing","synonyms":[{"name":"maintenance of template fidelity during replication fork processing","type":"exact"},{"name":"negative regulation of mitotic recombination involved in replication fork processing","type":"related"},{"name":"negative regulation of template switch recombination involved in replication fork processing","type":"exact"},{"name":"suppression of template switching during replication fork processing","type":"exact"}],"termid":"GO:0120291"}


id: MONDO:0017693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease due to glycogen synthase deficiency (obsolete MONDO:0017693)","secondary_identifiers":["Orphanet:308520","NANDO:1200824"],"synonyms":[{"name":"GSD due to glycogen synthase deficiency","type":"exact"},{"name":"GSD0","type":"exact"},{"name":"glycogen storage disease type 0","type":"exact"},{"name":"glycogenosis due to glycogen synthase deficiency","type":"exact"}],"termid":"MONDO:0017693","xrefs":{"Monarch":{"xref_id":"0017693"}}}


id: PBO:0057519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 637","termid":"PBO:0057519"}


id: GO:1902651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:22199252","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2A-H2B dimer displacement (obsolete GO:1902651)","synonyms":[{"name":"activation of histone H2A-H2B dimer displacement","type":"narrow"},{"name":"up regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"up-regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"upregulation of histone H2A-H2B dimer displacement","type":"exact"}],"termid":"GO:1902651"}


id: GO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the mesonephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron development","termid":"GO:0061215"}


id: GO:0044581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butyrate.","definition_xrefs":["GOC:mengo_curators","GOC:tt","PMID:19539744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"butyrate biosynthetic process","termid":"GO:0046358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:0044581"}


id: PBO:0005200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"12 small nucleolar RNA/small nucleolar RNA snR99","termid":"PBO:0005200"}


id: PBO:0088166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40 repeat-containing protein associated with the CCR4-NOT complex; interacts in a Ccr4p-dependent manner with Ssn2p; also interacts with Fis1p, Mdv1p and Dnm1p and plays a role in mitochondrial fission; CAF4 has a paralog, MDV1, that arose from the whole genome duplication","termid":"PBO:0088166"}


id: PBO:0002420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved protein","termid":"PBO:0002420"}


id: MONDO:0005955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete scrub typhus (obsolete MONDO:0005955)","termid":"MONDO:0005955","xrefs":{"Monarch":{"xref_id":"0005955"}}}


id: PBO:0116298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the TTT complex and regulator of telomere length; subunit of the TTT Hsp90 cochaperone complex that is involved in chromatin remodeling and telomeric chromatin regulation; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1; detected in mitochondria and the cytoplasm in high-throughput studies; similar to S. pombe Tti1p","termid":"PBO:0116298"}


id: MONDO:1010906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central core myopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central core myopathy, non-human animal","termid":"MONDO:1010192"},{"relation_name":"is_a","term_name":"congenital myopathy, dog","termid":"MONDO:1010918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central core myopathy, dog","secondary_identifiers":["OMIA:000172-9615"],"termid":"MONDO:1010906","xrefs":{"Monarch":{"xref_id":"1010906"}}}


id: GO:0070485
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101786],"is_not":false,"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dehydro-D-arabinono-1,4-lactone, the gamma-lactone (5R)-3,4-dihydroxy-5-(hydroxymethyl)furan-2(5H)-one.","definition_xrefs":["GOC:mah","GOC:cjk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydro-D-arabinono-1,4-lactone metabolic process","termid":"GO:0070484"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dehydro-D-arabinono-1,4-lactone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dehydro-D-arabinono-1,4-lactone anabolism","type":"exact"},{"name":"dehydro-D-arabinono-1,4-lactone biosynthesis","type":"exact"},{"name":"dehydro-D-arabinono-1,4-lactone formation","type":"exact"},{"name":"dehydro-D-arabinono-1,4-lactone synthesis","type":"exact"}],"termid":"GO:0070485","terms_by_termid":{"GO:0070485":null}}


id: PBO:0034555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K16_acetylation_at_boundary_element_IRC1L","termid":"PBO:0034555"}


id: GO:0009280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. In Gram-negative bacteria the membrane that separates the cytoplasm from the murein sacculus.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall inner membrane (obsolete GO:0009280)","synonyms":[{"name":"cell wall inner membrane","type":"exact"},{"name":"cytoplasmic membrane","type":"broad"}],"termid":"GO:0009280"}


id: PBO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.-.-.-","termid":"PBO:0000309"}


id: PR:Q9UUC6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein Sm D3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02964","PANTHER:PTHR23338:SF17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein Sm D3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.14","secondary_identifiers":["UniProtKB:Q9UUC6"],"synonyms":[{"name":"Sm-D3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPD3","type":"exact"},{"name":"snRNP core protein D3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUC6"}


id: MONDO:1011576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in peach-faced lovebird.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, peach-faced lovebird","secondary_identifiers":["OMIA:000181-60468"],"termid":"MONDO:1011576","xrefs":{"Monarch":{"xref_id":"1011576"}}}


id: GO:0033011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A condensed cytoplasmic structure that covers the nucleus of mammalian spermatozoa except for a narrow zone around the insertion of the tail. It shows two distinct regions, a subacrosomal layer and, continuing caudally beyond the acrosomic system, the postacrosomal sheath. The perinuclear theca has been considered a cytoskeletal scaffold responsible for maintaining the overall architecture of the mature sperm head; however, recent studies indicate that the bulk of its constituent proteins are not traditional cytoskeletal proteins but rather a variety of cytosolic proteins.","definition_xrefs":["PMID:8025156","PMID:17289678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"perinuclear region of cytoplasm","termid":"GO:0048471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"perinuclear theca","termid":"GO:0033011"}


id: MONDO:0018112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated scaphocephaly is a form of nonsyndromic craniosynostosis characterized by premature fusion of the sagittal suture.","definition_xrefs":["Orphanet:35093"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"}],"gene_count":0,"genotype_count":0,"name":"obsolete isolated scaphocephaly (obsolete MONDO:0018112)","secondary_identifiers":["NANDO:2201302"],"synonyms":[{"name":"isolated dolichocephaly","type":"exact"},{"name":"non-syndromic sagittal synostosis","type":"exact"}],"termid":"MONDO:0018112","xrefs":{"Monarch":{"xref_id":"0018112"}}}


id: PBO:0046974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member B1","termid":"PBO:0046974"}


id: FYPO:0002920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 36 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K36 methylation during vegetative growth","synonyms":[{"name":"normal histone H3 K36 methylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K36 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K36me during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K36 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002920"}


id: GO:0007366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of cells to parasegments in the embryo, through the action of overlapping series of pair rule gene activities.","definition_xrefs":["ISBN:0879694238","ISBN:0632030488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodic partitioning","termid":"GO:0007365"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periodic partitioning by pair rule gene","termid":"GO:0007366"}


id: MONDO:0012158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 2","secondary_identifiers":["MEDGEN:332363","MESH:C563827","UMLS:C1837090","OMIM:608932"],"synonyms":[{"name":"KTCN2","type":"exact"},{"name":"keratoconus 2","type":"exact"}],"termid":"MONDO:0012158","xrefs":{"Monarch":{"xref_id":"0012158"}}}


id: GO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"positively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045422"],"synonyms":[{"name":"activation of connective tissue growth factor production","type":"narrow"},{"name":"positive regulation of CCN2 production","type":"exact"},{"name":"positive regulation of CTGF production","type":"exact"},{"name":"positive regulation of Fisp12 production","type":"exact"},{"name":"positive regulation of Hcs24 production","type":"exact"},{"name":"positive regulation of IGFBP8 production","type":"exact"},{"name":"positive regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"positive regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"},{"name":"stimulation of connective tissue growth factor production","type":"narrow"},{"name":"up regulation of connective tissue growth factor production","type":"exact"},{"name":"up-regulation of connective tissue growth factor production","type":"exact"},{"name":"upregulation of connective tissue growth factor production","type":"exact"}],"termid":"GO:0032723"}


id: PR:A6X992
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16C4.21 gene.","definition_xrefs":["UniProtKB:A6X992","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.21","synonyms":[{"name":"Spom972h-SPCC16C4.21","type":"exact"}],"termid":"PR:A6X992"}


id: GO:0018213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-valine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-valine modification","termid":"GO:0018213"}


id: GO:0016883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for carbon-nitrogen ligases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-nitrogen ligase activity (obsolete GO:0016883)","synonyms":[{"name":"other carbon-nitrogen ligase activity","type":"exact"}],"termid":"GO:0016883"}


id: MONDO:0018294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with nephropathy as a major feature (obsolete MONDO:0018294)","secondary_identifiers":["Orphanet:371207"],"synonyms":[{"name":"CDG with nephropathy as a major feature","type":"exact"}],"termid":"MONDO:0018294","xrefs":{"Monarch":{"xref_id":"0018294"}}}


id: PBO:0046813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XIII A chain","termid":"PBO:0046813"}


id: GO:0102471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6C-glucosyl-2-hydroxynaringenin = isovitexin-7-olate + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxynaringenin-6C-glucoside dehydratase activity (obsolete GO:0102471)","termid":"GO:0102471"}


id: GO:0008446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose = GDP-4-dehydro-6-deoxy-alpha-D-mannose + H2O.","definition_xrefs":["RHEA:23820","EC:4.2.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"GDP-mannose 4,6-dehydratase activity","secondary_identifiers":["KEGG_REACTION:R00888","MetaCyc:GDPMANDEHYDRA-RXN","Reactome:R-HSA-6787632"],"synonyms":[{"name":"GDP-D-mannose 4,6-dehydratase activity","type":"related"},{"name":"GDP-D-mannose dehydratase activity","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase (GDP-4-dehydro-6-deoxy-D-mannose-forming)","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase activity","type":"related"},{"name":"GDPmannose 4,6-dehydratase activity","type":"related"},{"name":"Gmd","type":"related"},{"name":"guanosine 5'-diphosphate-D-mannose oxidoreductase activity","type":"related"},{"name":"guanosine diphosphomannose 4,6-dehydratase activity","type":"related"},{"name":"guanosine diphosphomannose oxidoreductase activity","type":"related"}],"termid":"GO:0008446"}


id: PBO:0062747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily J member 2 pseudogene","termid":"PBO:0062747"}


id: PBO:0062538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 3 pseudogene","termid":"PBO:0062538"}


id: GO:0060471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of secretion by a cell that results in the release of intracellular molecules contained within a cortical granule by fusion of the vesicle with the plasma membrane of a cell. A cortical granule is a specialized secretory vesicle that is released during egg activation that changes the surface of the egg to prevent polyspermy.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"},{"relation_name":"part_of","term_name":"prevention of polyspermy","termid":"GO:0060468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"cortical granule exocytosis","synonyms":[{"name":"cortical granule release","type":"related"},{"name":"cortical reaction","type":"related"}],"termid":"GO:0060471"}


id: MONDO:0010580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immunodysregulation - polyendocrinopathy - enteropathy - X-linked (IPEX) syndrome is a severe congenital systemic autoimmune disease characterized by refractory diarrhea, endocrinopathies, cutaneous involvement, and infections.","definition_xrefs":["Orphanet:37042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"},{"relation_name":"is_a","term_name":"autoimmune enteropathy","termid":"MONDO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome","secondary_identifiers":["UMLS:C0342288","ICD9:250.81","ICD10CM:E31.0","MEDGEN:83339","DOID:0090110","GARD:1850","SCTID:237618001","OMIM:304790","NCIT:C131009","MESH:C580192","NANDO:2200924"],"synonyms":[{"name":"DMSD","type":"exact"},{"name":"IDDM secretory diarrhea syndrome","type":"related"},{"name":"IDDM secretory diarrhoea syndrome","type":"related"},{"name":"IDDM-secretory diarrhea syndrome","type":"exact"},{"name":"IDDM-secretory diarrhoea syndrome","type":"exact"},{"name":"IMMUNODYSREGULATION, polyendocrinopathy, and enteropathy, X-linked","type":"related"},{"name":"IPEX","type":"exact"},{"name":"IPEX syndrome","type":"related"},{"name":"Iddm-secretory diarrhea syndrome","type":"related"},{"name":"Iddm-secretory diarrhoea syndrome","type":"related"},{"name":"Immunodysregulation, polyendocrinopathy and enteropathy X-linked","type":"related"},{"name":"X linked polyendocrinopathy","type":"exact"},{"name":"X-linked autoimmunity-allergic dysregulation syndrome","type":"exact"},{"name":"XLAAD","type":"exact"},{"name":"XPID","type":"exact"},{"name":"autoimmune enteropathy type 1","type":"exact"},{"name":"autoimmunity-immunodeficiency syndrome X-linked","type":"related"},{"name":"autoimmunity-immunodeficiency syndrome, X-linked","type":"exact"},{"name":"diabetes mellitus, congenital insulin-dependent, with fatal secretory diarrhea","type":"exact"},{"name":"diabetes mellitus, congenital insulin-dependent, with fatal secretory diarrhoea","type":"exact"},{"name":"diarrhea, polyendocrinopathy, fatal infection syndrome, X-linked","type":"exact"},{"name":"enteropathy, autoimmune, with hemolytic Anaemia and polyendocrinopathy","type":"related"},{"name":"enteropathy, autoimmune, with hemolytic Anemia and polyendocrinopathy","type":"related"},{"name":"immune dysfunction and diarrhea syndrome","type":"exact"},{"name":"immune dysfunction and diarrhoea syndrome","type":"exact"},{"name":"immune dysregulation, polyendocrinopathy, and enteropathy X-linked syndrome","type":"exact"},{"name":"immunodeficiency, polyendocrinopathy, and enteropathy, X-linked","type":"exact"},{"name":"immunodeficiency, polyendocrinopathy, and enteropathy, X-linked, formerly","type":"related"},{"name":"immunodysregulation, polyendocrinopathy, and enteropathy, X-linked","type":"exact"},{"name":"immunodysregulation, polyendocrinopathy, and enteropathy, X-linked, X-linked recessive","type":"exact"},{"name":"islets of Langerhans, absence of","type":"related"},{"name":"polyendocrinopathy, immune dysfunction and diarrhea X-linked","type":"related"},{"name":"polyendocrinopathy, immune dysfunction and diarrhoea X-linked","type":"related"},{"name":"polyendocrinopathy, immune dysfunction, and diarrhea, X-linked","type":"related"}],"termid":"MONDO:0010580","xrefs":{"Monarch":{"xref_id":"0010580"}}}


id: MONDO:0019522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recessive dystrophic epidermolysis bullosa (RDEB)-generalized other, also known as RDEB non-Hallopeau-Siemens type, is a subtype of DEB characterized by generalized cutaneous and mucosal blistering that is not associated with severe deformities.","definition_xrefs":["Orphanet:89842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"recessive dystrophic epidermolysis bullosa-generalized other","secondary_identifiers":["MEDGEN:1392226","GARD:12794","UMLS:C4511044"],"synonyms":[{"name":"RDEB generalisata mitis","type":"exact"},{"name":"RDEB, generalised intermediate","type":"exact"},{"name":"RDEB, generalized intermediate","type":"exact"},{"name":"RDEB, non-Hallopeau-Siemens type","type":"exact"},{"name":"RDEB-O","type":"exact"},{"name":"RDEB-generalized other","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa generalisata mitis","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, generalised other","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, generalized other","type":"exact"},{"name":"generalised mitis RDEB","type":"exact"},{"name":"generalized mitis RDEB","type":"exact"},{"name":"recessive dystrophic epidermolysis bullosa, generalised intermediate","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, generalized intermediate","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, non-Hallopeau-Siemens type","type":"exact"}],"termid":"MONDO:0019522","xrefs":{"Monarch":{"xref_id":"0019522"}}}


id: FYPO:0006353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere central core are present at greater levels than normal. Normally, the central core is not transcribed.","definition_xrefs":["PomBase:mah","PMID:23267073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased centromere central core transcript level","synonyms":[{"name":"accumulation of centromere central core-derived RNA transcripts","type":"related"},{"name":"increased centromere central core RNA level","type":"exact"},{"name":"increased centromere central core-derived RNA accumulation","type":"related"},{"name":"increased centromere central core-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased centromere central core-derived RNA level during vegetative growth","type":"exact"},{"name":"increased centromere central core-derived RNA transcript level","type":"exact"},{"name":"increased centromeric core transcript level","type":"exact"}],"termid":"FYPO:0006353"}


id: PBO:0003722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ran1","termid":"PBO:0003722"}


id: FYPO:0006505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to shmoo tip","synonyms":[{"name":"abolished protein localisation to shmoo tip","type":"exact"},{"name":"abolished protein localization to mating projection tip","type":"exact"},{"name":"protein localization to shmoo tip abolished","type":"exact"}],"termid":"FYPO:0006505"}


