# terms

id: PBO:0082306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic beta semi-aldehyde dehydrogenase; catalyzes the second step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis","termid":"PBO:0082306"}


id: PR:Q8TFH3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium transporter protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.11","secondary_identifiers":["UniProtKB:Q8TFH3"],"synonyms":[{"name":"Spom972h-MAGT1","type":"exact"},{"name":"oligosaccharyl transferase 34 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit OST3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH3"}


id: PBO:0018246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus-end directed microtubule motor, kinesin Pkl1","termid":"PBO:0018246"}


id: GO:0002822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains. An example of this process is found in the Gnathostomata.","definition_xrefs":["GOC:add","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"regulates","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"}


id: PBO:0050633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked member 3","termid":"PBO:0050633"}


id: GO:0120278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cerebral blood circulation.","definition_xrefs":["PMID:25397684","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cerebral blood circulation","termid":"GO:0120276"},{"relation_name":"is_a","term_name":"negative regulation of blood circulation","termid":"GO:1903523"},{"relation_name":"negatively_regulates","term_name":"cerebral blood circulation","termid":"GO:0120275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cerebral blood circulation","synonyms":[{"name":"down regulation of cerebral blood circulation","type":"exact"},{"name":"down-regulation of cerebral blood circulation","type":"exact"},{"name":"downregulation of cerebral blood circulation","type":"exact"},{"name":"inhibition of cerebral blood circulation","type":"narrow"},{"name":"negative regulation of cerebrum blood circulation","type":"exact"},{"name":"negative regulation of telencephalon blood circulation","type":"exact"}],"termid":"GO:0120278"}


id: PBO:0041621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CABP7 divergent transcript","termid":"PBO:0041621"}


id: PBO:0081405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF252P antisense RNA 1","termid":"PBO:0081405"}


id: GO:0033977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (S)-2-haloacid + H2O = (S)-2-hydroxyacid + halide, and (R)-2-haloacid + H2O = (R)-2-hydroxyacid + halide.","definition_xrefs":["RHEA:12072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2-haloacid dehalogenase (configuration-retaining) activity","secondary_identifiers":["MetaCyc:3.8.1.11-RXN","EC:3.8.1.11"],"synonyms":[{"name":"2-haloalkanoic acid dehalogenase activity","type":"broad"},{"name":"2-haloalkanoid acid halidohydrolase activity","type":"broad"},{"name":"DL-2-haloacid dehalogenase activity","type":"broad"},{"name":"DL-DEXr","type":"related"}],"termid":"GO:0033977"}


id: GO:0140106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A feeding behavior that involves the ingestion of blood. Hematophagous animals have mouth parts and chemical agents for penetrating vascular structures in the skin of hosts. To overcome natural hemostasis, vasoconstriction, inflammation, and pain sensation in the host, hematophagous animals pre-inject chemical substances with anesthetic and/or anticoagulant properties.","definition_xrefs":["Wikipedia:Hematophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematophagy","synonyms":[{"name":"feeding on blood of other organism","type":"exact"},{"name":"injection of substance into other organism during feeding on blood of other organism","type":"exact"},{"name":"taking of blood meal","type":"exact"}],"termid":"GO:0140106"}


id: PBO:0069439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 704, pseudogene","termid":"PBO:0069439"}


id: PR:G2TRS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP35G2.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P35G2.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.17","synonyms":[{"name":"Spom972h-SPBP35G2.17","type":"exact"}],"termid":"PR:G2TRS6"}


id: PBO:0028794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_Argonaute-associated_RNA_length","termid":"PBO:0028794"}


id: PBO:0017565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein implicated in cholesterol metabolism (predicted)","termid":"PBO:0017565"}


id: GO:1902437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of male mating behavior.","definition_xrefs":["GOC:TermGenie","PMID:24089208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of male mating behavior","termid":"GO:1902435"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of male mating behavior","synonyms":[{"name":"activation of male mating behavior","type":"narrow"},{"name":"up regulation of male mating behavior","type":"exact"},{"name":"up-regulation of male mating behavior","type":"exact"},{"name":"upregulation of male mating behavior","type":"exact"}],"termid":"GO:1902437"}


id: PBO:0062717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily N member 1 pseudogene","termid":"PBO:0062717"}


id: GO:2000262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation, common pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"is_a","term_name":"regulation of blood coagulation, common pathway","termid":"GO:2000260"},{"relation_name":"positively_regulates","term_name":"blood coagulation, common pathway","termid":"GO:0072377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood coagulation, common pathway","termid":"GO:2000262"}


id: GO:0051198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a coenzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of coenzyme metabolic process (obsolete GO:0051198)","synonyms":[{"name":"down regulation of coenzyme metabolic process","type":"exact"},{"name":"down-regulation of coenzyme metabolic process","type":"exact"},{"name":"downregulation of coenzyme metabolic process","type":"exact"},{"name":"inhibition of coenzyme metabolic process","type":"narrow"},{"name":"negative regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"negative regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"negative regulation of coenzyme metabolism","type":"exact"}],"termid":"GO:0051198"}


id: MONDO:0029141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome","termid":"MONDO:0019501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome, type 4","secondary_identifiers":["UMLS:C4748364","MEDGEN:1648315","OMIM:618144"],"synonyms":[{"name":"USH4","type":"related"},{"name":"Usher syndrome, type IV","type":"exact"}],"termid":"MONDO:0029141","xrefs":{"Monarch":{"xref_id":"0029141"}}}


id: MONDO:0006642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute organic mental disorder induced by cessation or reduction in chronic alcohol consumption. Clinical characteristics include confusion; delusions; vivid hallucinations; tremor; agitation; insomnia; and signs of autonomic hyperactivity (e.g., elevated blood pressure and heart rate, dilated pupils, and diaphoresis). This condition may occasionally be fatal. It was formerly called delirium tremens. (From Adams et al., Principles of Neurology, 6th ed, p1175)","definition_xrefs":["MESH:D000430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol-induced mental disorder","termid":"MONDO:0002326"},{"relation_name":"is_a","term_name":"alcohol withdrawal","termid":"MONDO:0005433"},{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol withdrawal delirium","secondary_identifiers":["ICD9:291.0","MEDGEN:1398","SCTID:8635005","MedDRA:10001610","UMLS:C0001957","EFO:1000800"],"synonyms":[{"name":"alcohol withdrawal associated autonomic hyperactivity","type":"related"},{"name":"alcohol withdrawal hallucinosis","type":"related"},{"name":"alcohol withdrawal induced delirium Tremens","type":"related"},{"name":"alcohol withdrawal-induced delirium Tremens","type":"related"},{"name":"autonomic hyperactivity, alcohol withdrawal associated","type":"related"},{"name":"delirium Tremens","type":"related"},{"name":"delirium Tremens, alcohol withdrawal induced","type":"related"},{"name":"delirium, alcohol withdrawal","type":"related"},{"name":"hallucinosis, alcohol withdrawal","type":"related"}],"termid":"MONDO:0006642","xrefs":{"Monarch":{"xref_id":"0006642"}}}


id: GO:0070614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tungstate (WO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tungstate is a bivalent oxoanion of tungsten.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tungstate ion transport","termid":"GO:0070614"}


id: GO:1904702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:bc","GOC:aruk","GOC:kmv","PMID:26412237","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell-cell junction","termid":"GO:0150106"},{"relation_name":"regulates","term_name":"protein localization to adherens junction","termid":"GO:0071896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to adherens junction","synonyms":[{"name":"regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"regulation of protein localization in cell-cell adherens junction","type":"exact"}],"termid":"GO:1904702"}


id: PBO:0071456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 62","termid":"PBO:0071456"}


id: GO:0051100
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105476,95615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that stops or reduces the rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of binding","type":"exact"},{"name":"down-regulation of binding","type":"exact"},{"name":"downregulation of binding","type":"exact"},{"name":"inhibition of binding","type":"narrow"}],"termid":"GO:0051100","terms_by_termid":{"GO:1904530":null}}


id: MONDO:0100528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A partial deletion of the short arm of chromosome 16 characterized by developmental delay, intellectual disability, speech delay, autism spectrum disorder, epilepsy, hypogonadism, and hypotonia. The behavioral profile includes impulsivity, compulsivity, stubbornness, manipulative behaviors, temper tantrums, and aggressive behaviors.","definition_xrefs":["Orphanet:500055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hao-Fountain syndrome","termid":"MONDO:0014805"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Hao-Fountain syndrome due to 16p13.2 microdeletion","secondary_identifiers":["UMLS:C5680086","GARD:17920","MEDGEN:1804697"],"synonyms":[{"name":"16p13.2 microdeletion syndrome","type":"exact"},{"name":"Del(16)(p13.2)","type":"exact"},{"name":"chromosome 16P13.2 deletion syndrome","type":"exact"},{"name":"chromosome 16p13.2 deletion syndrome","type":"exact"},{"name":"monosomy 16p13.2","type":"exact"}],"termid":"MONDO:0100528","xrefs":{"Monarch":{"xref_id":"0100528"}}}


id: PBO:0045842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 32","termid":"PBO:0045842"}


id: PBO:0083197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene KNS1","termid":"PBO:0083197"}


id: GO:0031962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear mineralocorticoid receptor.","definition_xrefs":["GOC:mah","PMID:12511169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nuclear mineralocorticoid receptor binding","synonyms":[{"name":"mineralocorticoid receptor binding","type":"broad"}],"termid":"GO:0031962"}


id: PATO:0000183
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000183 limb tone (obsolete PATO:0000183)","termid":"PATO:0000183"}


id: FYPO:0008125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A abnormal nuclear envelope organization phenotype in which SPB fenestra in the nuclear envelope are present for longer than normal.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of nuclear envelope SPB fenestra","synonyms":[{"name":"persistent nuclear envelope fenestra","type":"exact"}],"termid":"FYPO:0008125"}


id: GO:0062171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"lutein metabolic process","termid":"GO:0062170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lutein biosynthetic process","synonyms":[{"name":"lutein anabolism","type":"exact"},{"name":"lutein biosynthesis","type":"exact"},{"name":"lutein formation","type":"exact"}],"termid":"GO:0062171"}


id: PBO:0082250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the nascent polypeptide-associated complex (NAC); involved in protein sorting and translocation; associated with cytoplasmic ribosomes","termid":"PBO:0082250"}


id: MONDO:0019040
data:
  {"annotated_genes":["SJAG_02795","SJAG_01465","SJAG_00112","SJAG_00441","SJAG_01804","SJAG_02846","SJAG_04699","SJAG_04663","SJAG_04324","SJAG_00786","SJAG_02035","SJAG_03424","SJAG_01806","SJAG_03898","SJAG_01548","SJAG_01286","SJAG_03244","SJAG_03436","SJAG_04884","SJAG_01082","SJAG_00213","SJAG_03286","SJAG_02317","SJAG_02231","SJAG_03635"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859575"},{"annotations":[85940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859576"},{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008876"},{"annotations":[86482,86483,86481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013256"},{"annotations":[87109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[87106,87105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009759"},{"annotations":[86254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013582"},{"annotations":[85938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859346"},{"annotations":[86047,86048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[85880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012574"},{"annotations":[86595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010334"},{"annotations":[86309,86311,86312,86310,86308,86314,86313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"},{"annotations":[85955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"},{"annotations":[87455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008644"},{"annotations":[85932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","definition":"Clinical conditions caused by an abnormal chromosome constitution in which there is extra or missing chromosome material (either a whole chromosome or a chromosome segment). (from Thompson et al., Genetics in Medicine, 5th ed, p429)","definition_xrefs":["MESH:D025063"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00213":null,"SJAG_00441":null,"SJAG_00786":null,"SJAG_01082":null,"SJAG_01286":null,"SJAG_01465":null,"SJAG_01548":null,"SJAG_01804":null,"SJAG_01806":null,"SJAG_02035":null,"SJAG_02231":null,"SJAG_02317":null,"SJAG_02795":null,"SJAG_02846":null,"SJAG_03244":null,"SJAG_03286":null,"SJAG_03424":null,"SJAG_03436":null,"SJAG_03635":null,"SJAG_03898":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_04699":null,"SJAG_04884":null},"genotype_count":0,"is_obsolete":false,"name":"chromosomal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2100280","ICD9:758.89","SCTID:409709004","UMLS:C0008626","DOID:0080014","MEDGEN:3441","NCIT:C34470","Orphanet:68335","ICD10CM:Q90-Q99","NANDO:1100014","NANDO:2100279"],"synonyms":[{"name":"autosomal chromosome disorder","type":"related"},{"name":"autosomal chromosome disorders","type":"related"},{"name":"chromosomal disease","type":"exact"},{"name":"chromosomal disorder","type":"exact"},{"name":"chromosomal disorders","type":"exact"},{"name":"chromosome abnormality disorder","type":"related"},{"name":"chromosome abnormality disorders","type":"related"},{"name":"chromosome disorder","type":"exact"},{"name":"chromosome disorder, autosomal","type":"related"},{"name":"chromosome disorders, autosomal","type":"related"},{"name":"disorder, chromosomal","type":"exact"},{"name":"disorder, chromosome","type":"exact"},{"name":"disorder, chromosome abnormality","type":"related"},{"name":"disorders, chromosomal","type":"exact"},{"name":"disorders, chromosome","type":"exact"}],"termid":"MONDO:0019040","terms_by_termid":{"MONDO:0007925":null,"MONDO:0008644":null,"MONDO:0008684":null,"MONDO:0008876":null,"MONDO:0009759":null,"MONDO:0010334":null,"MONDO:0010767":null,"MONDO:0011402":null,"MONDO:0012574":null,"MONDO:0013256":null,"MONDO:0013582":null,"MONDO:0014848":null,"MONDO:0859346":null,"MONDO:0859575":null,"MONDO:0859576":null},"xrefs":{"Monarch":{"xref_id":"0019040"}}}


id: MONDO:0014143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome in which the cause of the disease is a mutation in the RIT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome 8","secondary_identifiers":["NCIT:C176936","UMLS:C3809233","DOID:0060586","MEDGEN:815563","GARD:15949","OMIM:615355"],"synonyms":[{"name":"NS8","type":"exact"},{"name":"Noonan syndrome 8","type":"exact"},{"name":"Noonan syndrome caused by mutation in RIT1","type":"exact"},{"name":"Noonan syndrome type 8","type":"exact"},{"name":"RIT1 Noonan syndrome","type":"exact"}],"termid":"MONDO:0014143","xrefs":{"Monarch":{"xref_id":"0014143"}}}


id: SO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site to which a polypeptide will bind with a zinc finger motif, which is characterized by requiring one or more Zinc 2+ ions for stabilized folding.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc_finger_binding_site","synonyms":[{"name":"zinc finger binding site","type":"exact"},{"name":"zinc_fing","type":"exact"}],"termid":"SO:0001971"}


id: MONDO:0000421
data:
  {"annotated_genes":["SJAG_04449","SJAG_02313","SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[87202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[87244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011152"},{"annotations":[86847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012596"},{"annotations":[86267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013531"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of L-serine biosynthetic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of serine family metabolism","termid":"MONDO:0019239"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"inborn serine deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050721"],"synonyms":[{"name":"inborn L-serine biosynthetic process disorder","type":"exact"},{"name":"inborn error of L-serine biosynthetic process","type":"exact"},{"name":"rare inborn error of L-serine biosynthetic process","type":"exact"}],"termid":"MONDO:0000421","terms_by_termid":{"MONDO:0009736":null,"MONDO:0011152":null,"MONDO:0012596":null,"MONDO:0013531":null,"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0000421"}}}


id: FYPO:0006364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which meiotic spindle microtubules become disconnected from the spindle pole body during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:24954111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology during meiosis I","termid":"FYPO:0005652"},{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology during meiosis I","termid":"FYPO:0006022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000120","FYPO:0000002","FYPO:0000121","FYPO:0002399","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"spindle microtubules detached from spindle pole body during meiosis I","synonyms":[{"name":"meiotic spindle microtubules detached from spindle pole body during meiosis I","type":"exact"},{"name":"non-polar spindle during meiosis I","type":"related"},{"name":"spindle microtubules detached from SPB during meiosis I","type":"exact"},{"name":"spindle microtubules detached from spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"spindle pole body detached from spindle microtubules during meiosis I","type":"exact"}],"termid":"FYPO:0006364"}


id: PBO:0044039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 11","termid":"PBO:0044039"}


id: GO:1905052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of base-excision repair.","definition_xrefs":["PMID:18973764","GOC:ah","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of base-excision repair","termid":"GO:1905051"},{"relation_name":"negatively_regulates","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"negative regulation of base-excision repair","synonyms":[{"name":"down regulation of BER","type":"exact"},{"name":"down regulation of base-excision repair","type":"exact"},{"name":"down-regulation of BER","type":"exact"},{"name":"down-regulation of base-excision repair","type":"exact"},{"name":"downregulation of BER","type":"exact"},{"name":"downregulation of base-excision repair","type":"exact"},{"name":"inhibition of BER","type":"narrow"},{"name":"inhibition of base-excision repair","type":"narrow"},{"name":"negative regulation of BER","type":"exact"}],"termid":"GO:1905052"}


id: PATO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flexibility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"flexible","termid":"PATO:0001544"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased flexibility","synonyms":[{"name":"low flexibility","type":"exact"}],"termid":"PATO:0001777"}


id: PBO:0010193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Cfh2 (predicted)","termid":"PBO:0010193"}


id: PBO:0058976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid leukemia factor 2","termid":"PBO:0058976"}


id: GO:0033378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protease to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to T cell secretory granule","termid":"GO:0033376"},{"relation_name":"part_of","term_name":"protease localization to T cell secretory granule","termid":"GO:0033375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protease localization to T cell secretory granule","synonyms":[{"name":"establishment of protease localisation in T cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of protease localization in T-cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033378"}


id: PBO:0076506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 6 pseudogene","termid":"PBO:0076506"}


id: GO:1903602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thermospermine.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:24906355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"thermospermine metabolic process","termid":"GO:1903601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermospermine catabolic process","synonyms":[{"name":"thermospermine breakdown","type":"exact"},{"name":"thermospermine catabolism","type":"exact"},{"name":"thermospermine degradation","type":"exact"}],"termid":"GO:1903602"}


id: GO:0008611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.","definition_xrefs":["GOC:ma","ISBN:0198547684","PMID:15337120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"ether lipid metabolic process","termid":"GO:0046485"},{"relation_name":"is_a","term_name":"glycerol ether biosynthetic process","termid":"GO:0046504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"ether lipid biosynthetic process","secondary_identifiers":["Reactome:R-HSA-75896"],"synonyms":[{"name":"ether lipid anabolism","type":"exact"},{"name":"ether lipid biosynthesis","type":"exact"},{"name":"ether lipid formation","type":"exact"},{"name":"ether lipid synthesis","type":"exact"},{"name":"plasmalogen biosynthetic process","type":"narrow"}],"termid":"GO:0008611"}


id: MOD:00782
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to N-acetyl-L-leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-leucine","synonyms":[{"name":"AcLeu","type":"exact"}],"termid":"MOD:00782"}


id: PBO:0076941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tissue factor pathway inhibitor 2","termid":"PBO:0076941"}


id: GO:0071136
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha7-beta1 integrin complex bound to laminin alpha-2.","definition_xrefs":["PMID:17598176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha7-beta1 integrin-laminin alpha-2 complex","synonyms":[{"name":"ITGA7-ITGB1-LAMA2 complex","type":"narrow"}],"termid":"GO:0071136"}


id: PBO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex component Spt16","termid":"PBO:0004611"}


id: GO:0061715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The posttranscriptional addition of a methyl group to the 2' oxygen atom of a nucleotide residue in an miRNA molecule.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA","PMID:20705645"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA 2'-O-methylation (obsolete GO:0061715)","termid":"GO:0061715"}


id: PBO:0063446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE7A divergent transcript","termid":"PBO:0063446"}


id: _global:regulates_o_results_in_morphogenesis_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the results_in_morphogenesis_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_morphogenesis_of","secondary_identifiers":["GOREL:0001026"],"termid":"_global:regulates_o_results_in_morphogenesis_of"}


id: PBO:0054450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1847","termid":"PBO:0054450"}


id: PBO:0084370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid raft associated protein; interacts with the plasma membrane ATPase Pma1p and has a role in its targeting to the plasma membrane by influencing its incorporation into lipid rafts; sometimes classified in the medium-chain dehydrogenase/reductases (MDRs) superfamily; AST1 has a paralog, AST2, that arose from the whole genome duplication","termid":"PBO:0084370"}


id: PBO:0058925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7d","termid":"PBO:0058925"}


id: FYPO:0006593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of spindle microtubules from the spindle pole body (SPB) occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah","PMID:19942852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic microtubule nucleation","termid":"FYPO:0006336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule nucleation from spindle pole body","synonyms":[{"name":"decreased microtubule nucleation from spindle pole body during mitotic cell cycle","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation by spindle pole body","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from SPB","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during mitotic M phase","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during vegetative growth","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic SPB","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic spindle pole body","type":"exact"},{"name":"reduced mitotic spindle microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0006593"}


id: GO:0035006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The blackening of the wounded area of the cuticle or the surface of invading pathogens, parasites or parasitoids, resulting from a proteolytic cascade leading to the de novo synthesis and deposition of melanin.","definition_xrefs":["PMID:12408809","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanin metabolic process","termid":"GO:0006582"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"melanization defense response","synonyms":[{"name":"melanization defence response","type":"exact"}],"termid":"GO:0035006"}


id: GO:1903984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GOC:bf","PMID:24939851","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902043"},{"relation_name":"is_a","term_name":"regulation of TRAIL-activated apoptotic signaling pathway","termid":"GO:1903121"},{"relation_name":"positively_regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"activation of TRAIL-activated apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-induced apoptotic signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"narrow"},{"name":"positive regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"upregulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903984"}


id: PBO:0083250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083250"}


id: PBO:0017848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght7 (predicted)","termid":"PBO:0017848"}


id: GO:1902784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an undecane stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23826995","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to undecane","termid":"GO:1902784"}


id: PBO:0069578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 851, pseudogene","termid":"PBO:0069578"}


id: PATO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled backwards spirally on each side.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"revolute","termid":"PATO:0001963"}


id: GO:0046606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the centrosome cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centrosome cycle","termid":"GO:0046605"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"negatively_regulates","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"negative regulation of centrosome cycle","synonyms":[{"name":"down regulation of centrosome cycle","type":"exact"},{"name":"down-regulation of centrosome cycle","type":"exact"},{"name":"downregulation of centrosome cycle","type":"exact"},{"name":"inhibition of centrosome cycle","type":"narrow"}],"termid":"GO:0046606"}


id: MONDO:0020625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--wright antigen (obsolete MONDO:0020625)","secondary_identifiers":["OMIM:112050"],"synonyms":[{"name":"BLOOD GROUP--WRIGHT ANTIGEN","type":"related"},{"name":"WR","type":"related"},{"name":"Wright Blood Group Antigen","type":"related"},{"name":"blood group, Wright","type":"exact"}],"termid":"MONDO:0020625","xrefs":{"Monarch":{"xref_id":"0020625"}}}


id: MOD:00690
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of an oxazole or thiazole ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/thiazole ring crosslinked residues","termid":"MOD:00690"}


id: PBO:0065742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal testis enriched protein 1","termid":"PBO:0065742"}


id: SO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A uridine base that has been modified.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_uridine","synonyms":[{"name":"modified uridine","type":"exact"}],"termid":"SO:0001277"}


id: GO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","CL:0000763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell homeostasis","termid":"GO:0002262"}


id: PBO:0073053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCY1 like pseudokinase 1","termid":"PBO:0073053"}


id: PBO:0027988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_abnormal_septum_morphology,_enlarged_nucleus","termid":"PBO:0027988"}


id: GO:1904002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:hjd","PMID:16901790","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sebum secreting cell proliferation","synonyms":[{"name":"regulation of sebocyte proliferation","type":"related"}],"termid":"GO:1904002"}


id: PBO:0108986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 10","termid":"PBO:0108986"}


id: PBO:0089775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA-type Gaf1","termid":"PBO:0089775"}


id: FYPO:0002552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer lipid droplets than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"lipid droplets present in decreased numbers","synonyms":[{"name":"decreased level of lipid droplets","type":"related"},{"name":"fewer lipid droplets present during vegetative growth","type":"exact"},{"name":"lipid droplets present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"lipid droplets present in decreased numbers during vegetative growth","type":"exact"},{"name":"lipid droplets present in reduced numbers","type":"exact"},{"name":"lipid particles present in decreased numbers","type":"exact"}],"termid":"FYPO:0002552"}


id: PBO:0110172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor Sls1","termid":"PBO:0110172"}


id: PBO:0070102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 16 pseudogene","termid":"PBO:0070102"}


id: PBO:0046598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 8","termid":"PBO:0046598"}


id: PBO:0084372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipoate-protein ligase; octanoyl-CoA: protein transferase required along with Lip2 and Lip5 for lipoylation of Lat1p and Kgd2p; similar to E. coli LplA; null mutant displays reduced frequency of mitochondrial genome loss","termid":"PBO:0084372"}


id: FYPO:0004163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable when cells the population are subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased viability upon glucose starvation","synonyms":[{"name":"increased cell population viability upon glucose starvation","type":"exact"},{"name":"increased viability during glucose starvation","type":"exact"},{"name":"increased viability upon glucose depletion","type":"exact"},{"name":"increased viability upon glucose deprivation","type":"exact"},{"name":"increased viability upon glucose limitation","type":"related"}],"termid":"FYPO:0004163"}


id: PBO:0044735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 3","termid":"PBO:0044735"}


id: PBO:0048971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2, mitochondrial","termid":"PBO:0048971"}


id: FYPO:0007812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to stavudine. Cells stop growing (and may die) at a concentration of stavudine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:34108240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to stavudine","synonyms":[{"name":"hypersensitive to stavudine","type":"exact"},{"name":"sensitive to stavudine during mitotic cell cycle","type":"related"},{"name":"sensitive to stavudine during vegetative growth","type":"exact"}],"termid":"FYPO:0007812"}


id: PBO:0048299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth associated protein 43","termid":"PBO:0048299"}


id: PBO:0052128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily F member 1","termid":"PBO:0052128"}


id: PR:O43011
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histidyl-tRNA synthetase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11476:SF0","OMA:SCHPO03718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.12","secondary_identifiers":["UniProtKB:O43011"],"synonyms":[{"name":"HisRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-HARS","type":"exact"},{"name":"histidyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43011"}


id: PBO:0087086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L4B; homologous to mammalian ribosomal protein L4 and bacterial L4; RPL4B has a paralog, RPL4A, that arose from the whole genome duplication","termid":"PBO:0087086"}


id: PBO:0040395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E1 pseudogene 3","termid":"PBO:0040395"}


id: PBO:0073384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 1A, histone lysine methyltransferase","termid":"PBO:0073384"}


id: PBO:0071602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 19","termid":"PBO:0071602"}


id: GO:0042743
data:
  {"annotated_genes":["SJAG_02515","SJAG_01199","SJAG_04823","SJAG_04953","SJAG_01216","SJAG_00141","SJAG_03166"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105370,117697,118621,95520,100323,109159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[100325,109160,70643,95522,105371,71302,76145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042744"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:jl","PMID:21734470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_03166":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"H2O2 metabolic process","type":"exact"},{"name":"hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0042743","terms_by_termid":{"GO:0042744":null,"GO:0061692":null}}


id: PBO:0052423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL3 antisense RNA 2","termid":"PBO:0052423"}


id: PBO:0069413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 674, pseudogene","termid":"PBO:0069413"}


id: MONDO:0024616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the tympanic membrane.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tympanic membrane disorder","termid":"MONDO:0003648"},{"relation_name":"is_a","term_name":"otitis media","termid":"MONDO:0005441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tympanitis","secondary_identifiers":["icd11.foundation:225078522","SCTID:14852000","MEDGEN:507971","UMLS:C0027134"],"synonyms":[{"name":"inflammation of tympanic membrane","type":"exact"},{"name":"myringitis","type":"exact"},{"name":"tympanic membrane inflammation","type":"exact"}],"termid":"MONDO:0024616","xrefs":{"Monarch":{"xref_id":"0024616"}}}


id: GO:0006845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of aspartate and glutamate into, out of or within a mitochondrion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial aspartate/glutamate transport (obsolete GO:0006845)","synonyms":[{"name":"mitochondrial aspartate/glutamate transport","type":"exact"}],"termid":"GO:0006845"}


id: SO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation where it decreases transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_repressed","termid":"SO:0000126"},{"relation_name":"is_a","term_name":"autoregulated","termid":"SO:0000471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_autoregulated","synonyms":[{"name":"negatively autoregulated","type":"exact"}],"termid":"SO:0000473"}


id: PBO:0064576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protection of telomeres 1","termid":"PBO:0064576"}


id: GO:0014036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neural crest cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate specification","termid":"GO:0048866"},{"relation_name":"part_of","term_name":"neural crest cell fate commitment","termid":"GO:0014034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate specification","termid":"GO:0014036"}


id: GO:0035167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of blood cells from the larval lymph gland. The lymph gland consists of three to six bilaterally paired lobes that are attached to the cardioblasts during larval stages, and it degenerates during pupal stages.","definition_xrefs":["GOC:bf","PMID:12445385","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic hemopoiesis","termid":"GO:0035166"},{"relation_name":"part_of","term_name":"larval development","termid":"GO:0002164"},{"relation_name":"part_of","term_name":"lymph gland development","termid":"GO:0048542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval lymph gland hemopoiesis","synonyms":[{"name":"larval lymph gland haematopoiesis","type":"exact"},{"name":"larval lymph gland haemopoiesis","type":"exact"},{"name":"larval lymph gland hematopoiesis","type":"exact"}],"termid":"GO:0035167"}


id: PBO:0050709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 7","termid":"PBO:0050709"}


id: FYPO:0005926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G1 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during mitotic G1 phase","synonyms":[{"name":"normal protein accumulation during mitotic G1 phase","type":"related"},{"name":"normal protein level during G1 phase of mitotic cell cycle","type":"related"},{"name":"normal protein level during mitotic G1 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0005926"}


id: MONDO:0015448
data:
  {"annotated_genes":["SJAG_01490","SJAG_00755","SJAG_02646","SJAG_00601","SJAG_00354","SJAG_04560","SJAG_03099","SJAG_05305","SJAG_03490","SJAG_00080","SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032909"},{"annotations":[86042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859321"},{"annotations":[86796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007415"},{"annotations":[85459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014063"},{"annotations":[85460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014064"},{"annotations":[85458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014065"},{"annotations":[85462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014066"},{"annotations":[86260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014194"},{"annotations":[86744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014356"},{"annotations":[86750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014364"},{"annotations":[87024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014496"}]},"cv_name":"mondo","definition":"Isolated complex III deficiency is a rare, genetic, mitochondrial oxidative phosphorylation disorder characterized by a wide spectrum of clinical manifestations ranging from isolated myopathy or transient hepatopathy to severe multisystem disorder (that may include hypotonia, failure to thrive, psychomotor delay, cardiomyopathy, encephalopathy, renal tubulopathy, hearing impairment, lactic acidosis, hypoglycemia and other signs and symptoms).","definition_xrefs":["Orphanet:1460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00354":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_01405":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03099":null,"SJAG_03490":null,"SJAG_04560":null,"SJAG_05305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex III deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1852372","DOID:0111139","GARD:8295","MEDGEN:377658"],"synonyms":[{"name":"isolated CoQ-cytochrome C reductase deficiency","type":"exact"},{"name":"isolated coenzyme Q-cytochrome C reductase deficiency","type":"exact"},{"name":"isolated complex III deficiency","type":"related"},{"name":"isolated mitochondrial respiratory chain complex III deficiency","type":"exact"},{"name":"isolated ubiquinone-cytochrome C reductase deficiency","type":"exact"}],"termid":"MONDO:0015448","terms_by_termid":{"MONDO:0007415":null,"MONDO:0014063":null,"MONDO:0014064":null,"MONDO:0014065":null,"MONDO:0014066":null,"MONDO:0014194":null,"MONDO:0014356":null,"MONDO:0014364":null,"MONDO:0014496":null,"MONDO:0032909":null,"MONDO:0859321":null},"xrefs":{"Monarch":{"xref_id":"0015448"}}}


id: PBO:0088511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human BRAP ortholog","termid":"PBO:0088511"}


id: PBO:0088929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc5","termid":"PBO:0088929"}


id: MONDO:0021061
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87635,87634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A hereditary neoplastic syndrome in which tumors grow in the nervous system. There are typically 3 main types recognized, but other forms with uncertain etiology exist.","definition_xrefs":["NCIT:C6727","Wikipedia:Neurofibromatosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:237.71","UMLS:C0162678","ICD9:237.7","MEDGEN:58149","EFO:0008514","SCTID:19133005","GARD:10420","NANDO:1200226","NANDO:1200227","NANDO:2201003","NANDO:1200225","ICDO:9540/1","MESH:D017253","ICD9:237.72","ICD9:237.70","DOID:8712"],"synonyms":[{"name":"Recklinghausen's neurofibromatosis","type":"exact"},{"name":"acoustic neurofibromatosis","type":"exact"},{"name":"central Neurofibromatosis","type":"exact"},{"name":"neurofibromatosis","type":"exact"},{"name":"neurofibromatosis syndrome","type":"exact"},{"name":"neurofibromatosis type 2","type":"narrow"},{"name":"neurofibromatosis type 4","type":"narrow"},{"name":"neurofibromatosis type IV","type":"narrow"},{"name":"peripheral Neurofibromatosis","type":"exact"},{"name":"type IV neurofibromatosis of riccardi","type":"exact"},{"name":"von Reklinghausen disease","type":"exact"}],"termid":"MONDO:0021061","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0021061"}}}


id: PBO:0030078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import_during_vegetative_growth","termid":"PBO:0030078"}


id: GO:0009188
data:
  {"annotated_genes":["SJAG_02038","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[80736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[80738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleoside diphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate biosynthetic process","termid":"GO:0009133"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate metabolic process","termid":"GO:0009185"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ribonucleoside diphosphate anabolism","type":"exact"},{"name":"ribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"ribonucleoside diphosphate formation","type":"exact"},{"name":"ribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009188","terms_by_termid":{"GO:0006172":null,"GO:0006225":null,"GO:0046705":null}}


id: PBO:0111825
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin family","termid":"PBO:0111825"}


id: GO:0004026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an alcohol = CoA + an acetyl ester.","definition_xrefs":["EC:2.3.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"},{"relation_name":"is_a","term_name":"alcohol O-acyltransferase activity","termid":"GO:0034318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alcohol O-acetyltransferase activity","secondary_identifiers":["RHEA:17229","MetaCyc:ALCOHOL-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"AATASE activity","type":"related"},{"name":"acetyl-CoA:alcohol O-acetyltransferase activity","type":"related"},{"name":"alcohol acetyltransferase activity","type":"related"}],"termid":"GO:0004026"}


id: GO:0014825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the fundus of stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The fundus is the portion of the stomach that lies above the cardiac notch.","definition_xrefs":["MA:0001612","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal stomach smooth muscle contraction","termid":"GO:0014847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach fundus smooth muscle contraction","termid":"GO:0014825"}


id: GO:0019602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form 3-hydroxytoluene (m-cresol).","definition_xrefs":["MetaCyc:TOLUENE-DEG-3-OH-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene oxidation","termid":"GO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation via 3-hydroxytoluene","termid":"GO:0019602"}


id: MONDO:0009713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 18, autosomal recessive","secondary_identifiers":["UMLS:C2749509","MEDGEN:411856","OMIM:255500","MESH:C567606"],"synonyms":[{"name":"MYP18","type":"exact"},{"name":"myopia 18, autosomal recessive","type":"exact"}],"termid":"MONDO:0009713","xrefs":{"Monarch":{"xref_id":"0009713"}}}


id: PBO:0084824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for assembly of cytochrome bc1 complex; forms a complex with Cbp6p that binds to mt ribosomes near the polypeptide tunnel exit and promotes efficient translation of the COB mRNA; Cbp3p-Cbp6p complex also interacts with newly synthesized cytochrome b (Cobp) and Cbp4p to promote assembly of Cobp into the cytochrome bc1 complex; Cbp3p-Cbp6p complex is sequestered if assembly of Complex III is blocked, downregulating COB mRNA translation","termid":"PBO:0084824"}


id: GO:1990029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rhythmical contraction and relaxation of arterioles, observed as slow and fast waves, with frequencies of 1-2 and 10-20 cpm.","definition_xrefs":["PMID:14993429","PMID:15678091","GOC:sl","PMID:1932763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasomotion","termid":"GO:1990029"}


id: GO:0071728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the beak over time from its initial formation until its mature state. The avian beak is an external anatomical structure, in the head region, that is adapted for feeding self and young, catching prey, probing, etc. It encompasses, but is not restricted to, the maxilla, mandible, maxillary rhamphotheca, mandibular rhamphotheca, nostril, nasal fossa, nasal bones, egg tooth and rictus.","definition_xrefs":["ISBN:0702008729","GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beak development","termid":"GO:0071728"}


id: PBO:0078887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-4","termid":"PBO:0078887"}


id: GO:0030596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides.","definition_xrefs":["EC:3.2.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"alpha-L-rhamnosidase activity","secondary_identifiers":["MetaCyc:3.2.1.40-RXN","RHEA:17465","KEGG_REACTION:R02436"],"synonyms":[{"name":"alpha-L-rhamnosidase N","type":"related"},{"name":"alpha-L-rhamnosidase T","type":"related"},{"name":"alpha-L-rhamnoside rhamnohydrolase activity","type":"related"}],"termid":"GO:0030596"}


id: FYPO:0002173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during the meiotic cell cycle measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased level of meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of meiotic cell cycle gene mRNA during vegetative growth","type":"related"},{"name":"increased level of meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of meiotic nuclear division gene mRNA during vegetative growth","type":"exact"},{"name":"increased meiotic gene mRNA accumulation during vegetative growth","type":"related"},{"name":"untimely expression of gametogenic genes during mitotic growth","type":"exact"}],"termid":"FYPO:0002173"}


id: MONDO:0007276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cat eye syndrome (CES) is a rare chromosomal disorder with a highly variable clinical presentation. Most patients have multiple malformations affecting the eyes (iris coloboma), ears (preauricular pits and/or tags), anal region (anal atresia), heart and kidneys. Intellectual disability is usually mild or borderline normal.","definition_xrefs":["Orphanet:195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat-eye syndrome","secondary_identifiers":["NCIT:C75477","OMIM:115470","MESH:C535918","icd11.foundation:1813923633","DECIPHER:42","SCTID:26445008","UMLS:C0265493","GARD:26","MEDGEN:120543","NORD:899"],"synonyms":[{"name":"CAT eye syndrome","type":"exact"},{"name":"CES","type":"exact"},{"name":"Cat Eye Syndrome","type":"exact"},{"name":"Inv dup(22)(q11)","type":"related"},{"name":"Schmid-Fraccaro syndrome","type":"related"},{"name":"cat-eye syndrome (Type I)","type":"exact"},{"name":"chromosome 22 partial tetrasomy","type":"related"}],"termid":"MONDO:0007276","xrefs":{"Monarch":{"xref_id":"0007276"}}}


id: GO:0060584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of prostaglandin-endoperoxide synthase activity (obsolete GO:0060584)","synonyms":[{"name":"regulation of (PG)H synthase activity","type":"related"},{"name":"regulation of PG synthetase activity","type":"related"},{"name":"regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060584"}


id: PBO:0052077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 2","termid":"PBO:0052077"}


id: PBO:0087749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the THO complex; THO is required for efficient transcription elongation and involved in transcriptional elongation-associated recombination; required for LacZ RNA expression from certain plasmids","termid":"PBO:0087749"}


id: GO:0048924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast mantle cell. (N.B. This may be development of neuromast mantle cell type or a set of cells of neuromast mantle cell type. This will involve the change of a cell or set of cells from one cell identity to another). Mantle cells are non-sensory cells that surround the sensory strip, separating the neuromast from the epidermis. Mantle cells secrete the cupula in which the ciliary bundles of all of the hair cells are embedded.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast mantle cell differentiation","termid":"GO:0048888"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast mantle cell differentiation","termid":"GO:0048924"}


id: GO:0120527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + an aliphatic (Z)-desulfo-glucosinolate = a (Z)-omega-(methylsulfanyl)-N-sulfo-alkylhydroximate S-glucoside + adenosine 3',5'-bisphosphate + H+.","definition_xrefs":["RHEA:52724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aliphatic desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["EC:2.8.2.38","MetaCyc:RXN-18179"],"termid":"GO:0120527"}


id: MONDO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the ciliated respiratory mucosa that lines the sphenoid sinus. It is classified as inverted papilloma and oncocytic papilloma.","definition_xrefs":["NCIT:C6838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus Schneiderian papilloma","termid":"MONDO:0006353"},{"relation_name":"is_a","term_name":"benign neoplasm of sphenoidal sinus","termid":"MONDO:0021477"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoid sinus Schneiderian papilloma","secondary_identifiers":["UMLS:C1336038","MEDGEN:277659","DOID:7679"],"synonyms":[{"name":"Schneiderian papilloma of sphenoid sinus","type":"related"},{"name":"Schneiderian papilloma of the sphenoid sinus","type":"exact"},{"name":"sphenoid sinus Schneiderian papilloma","type":"exact"}],"termid":"MONDO:0004327","xrefs":{"Monarch":{"xref_id":"0004327"}}}


id: PBO:0068361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 144A","termid":"PBO:0068361"}


id: PBO:0057617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1183","termid":"PBO:0057617"}


id: PBO:0051226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-15-1 (pseudogene)","termid":"PBO:0051226"}


id: GO:0106103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that resides in the cis-golgi membrane and plays a role in the tethering of COPII vesicles, through an interaction with vesicle tethering proteins (p115 in H. Sapiens and Uso1 S. cerevisiae), granting the cis-Golgi and endoplasmic reticulum to Golgi vesicle-mediated transport. It is composed by GRASP65 and GM130 protein in H. sapiens and by Bug1 and Grh1 proteins in S. cerevisiae.","definition_xrefs":["PMID:9628863","GOC:lnp","PMID:21482742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"cis-Golgi network membrane","termid":"GO:0033106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"COPII vesicles tethering complex","synonyms":[{"name":"Bug1-Grh1 complex","type":"narrow"},{"name":"GRASP65-GM130 complex","type":"exact"}],"termid":"GO:0106103"}


id: SO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Plastid rRNA is an RNA component of the small or large subunits of plastid (such as chloroplast) ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_rRNA","synonyms":[{"name":"plastid rRNA","type":"exact"}],"termid":"SO:0002346"}


id: PBO:0090015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase Plb2","termid":"PBO:0090015"}


id: PBO:0044907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterosome assembly protein 1","termid":"PBO:0044907"}


id: PBO:0080741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWTR1 intronic transcript 1","termid":"PBO:0080741"}


id: FYPO:0005662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more TR boxes occurs to a greater extent than normal.","definition_xrefs":["PMID:7975894","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription from TR box","synonyms":[{"name":"expression of TR box target genes increased","type":"related"}],"termid":"FYPO:0005662"}


id: GO:0180043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of an inositol pyrophosphate.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140299","GO:0098772"],"is_obsolete":false,"name":"inositol pyrophosphate sensor activity","termid":"GO:0180043"}


id: PATO:0000628
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue the bearer's being changed in abnormal position.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced","termid":"PATO:0002181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised","secondary_identifiers":["PATO:0000621"],"synonyms":[{"name":"ectopic","type":"exact"},{"name":"mislocalized","type":"exact"}],"termid":"PATO:0000628"}


id: MONDO:0024234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seckel like syndrome majoor-krakauer type","synonyms":[{"name":"Bird-headed dwarfism microcephaly micrognathia","type":"related"}],"termid":"MONDO:0024234","xrefs":{"Monarch":{"xref_id":"0024234"}}}


id: GO:0072321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of proteins into, out of or within a cell, or between cells, mediated by chaperone molecules that bind to the transported proteins.","definition_xrefs":["PMID:20378773","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone-mediated protein transport (obsolete GO:0072321)","termid":"GO:0072321"}


id: GO:2000915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucuronoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xylan catabolic process","termid":"GO:2001000"},{"relation_name":"regulates","term_name":"glucuronoxylan catabolic process","termid":"GO:2000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glucuronoxylan catabolic process","synonyms":[{"name":"regulation of glucuronoxylan catabolism","type":"exact"}],"termid":"GO:2000915"}


id: PBO:0057460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 579","termid":"PBO:0057460"}


id: PBO:0048290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 2","termid":"PBO:0048290"}


id: PR:O43087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kms2 gene.","definition_xrefs":["UniProtKB:O43087","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyogamy meiotic segregation protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.12","synonyms":[{"name":"Spom972h-kms2","type":"exact"}],"termid":"PR:O43087"}


id: GO:0030280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an epidermal cutaneous structure.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of skin epidermis","synonyms":[{"name":"structural constituent of epidermis","type":"broad"}],"termid":"GO:0030280"}


id: MONDO:1011106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polycystic kidney disease that occurs in pigs due to a mutation in the PKD2 gene created using gene editing.","definition_xrefs":["OMIA:002525-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, pig","termid":"MONDO:1011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, PKD2-related, pig","synonyms":[{"name":"polycystic kidney disease-2, pig","type":"related"}],"termid":"MONDO:1011106","xrefs":{"Monarch":{"xref_id":"1011106"}}}


id: GO:0061181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation","termid":"GO:0032330"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chondrocyte development","termid":"GO:0061181"}


id: PBO:0078958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-1","termid":"PBO:0078958"}


id: GO:1903652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation by an infecting virus of host cytoplasmic transport.","definition_xrefs":["GO_REF:0000063","GOC:TermGenie","PMID:25049409"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host cytoplasmic transport (obsolete GO:1903652)","synonyms":[{"name":"regulation by virus of host cytoplasmic streaming","type":"exact"},{"name":"regulation by virus of host cytoplasmic transport","type":"exact"},{"name":"viral modulation of host cytoplasmic trafficking","type":"exact"}],"termid":"GO:1903652"}


id: PBO:0091596
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerate PhosphoMutase","termid":"PBO:0091596"}


id: MONDO:0700132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"neurocristopathy, non-human animal","termid":"MONDO:1011337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, non-human animal","secondary_identifiers":["OMIA:002231"],"termid":"MONDO:0700132","xrefs":{"Monarch":{"xref_id":"0700132"}}}


id: PBO:0074741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 101A","termid":"PBO:0074741"}


id: PBO:0057006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mir-99a-let-7c cluster host gene","termid":"PBO:0057006"}


id: PBO:0079298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTN antisense RNA 1","termid":"PBO:0079298"}


id: GO:0017044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of melanocyte-stimulating hormone, any of three peptide hormones that are produced by the intermediate lobe of the pituitary gland and, upon receptor binding, cause dispersal of melanosomes in melanophores of poikilothermic vertebrates.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"positively_regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0038023","GO:0098772","GO:0005488","GO:0003674","GO:0140677","GO:0005515"],"is_obsolete":false,"name":"melanocyte-stimulating hormone activity","synonyms":[{"name":"alpha-melanocyte stimulating hormone activity","type":"narrow"},{"name":"alpha-melanophore stimulating hormone activity","type":"narrow"},{"name":"melanocyte stimulating hormone activity","type":"exact"}],"termid":"GO:0017044"}


id: PBO:0031223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_drug_(obsolete_FYPO:0000211)","termid":"PBO:0031223"}


id: PBO:0067117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 162, pseudogene","termid":"PBO:0067117"}


id: GO:0071262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of deprivation of nourishment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"},{"relation_name":"part_of","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation in response to starvation","synonyms":[{"name":"regulation of translational initiation in response to nutrient starvation","type":"exact"}],"termid":"GO:0071262"}


id: GO:0034244
data:
  {"annotated_genes":["SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118264],"is_not":false,"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription, elongation","termid":"GO:0032785"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase II","termid":"GO:0034243"},{"relation_name":"negatively_regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"negative regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090041"],"synonyms":[{"name":"negative regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0034244","terms_by_termid":{"GO:0034244":null}}


id: GO:1905946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to calcium ion.","definition_xrefs":["PMID:11404397","GOC:bc","GOC:aruk","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to calcium ion","termid":"GO:1905945"},{"relation_name":"negatively_regulates","term_name":"response to calcium ion","termid":"GO:0051592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to calcium ion","synonyms":[{"name":"down regulation of response to Ca2+ ion","type":"exact"},{"name":"down regulation of response to calcium ion","type":"exact"},{"name":"down-regulation of response to Ca2+ ion","type":"exact"},{"name":"down-regulation of response to calcium ion","type":"exact"},{"name":"downregulation of response to Ca2+ ion","type":"exact"},{"name":"downregulation of response to calcium ion","type":"exact"},{"name":"inhibition of response to Ca2+ ion","type":"narrow"},{"name":"inhibition of response to calcium ion","type":"narrow"},{"name":"negative regulation of response to Ca2+ ion","type":"exact"}],"termid":"GO:1905946"}


id: PBO:0028381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_uracil_DNA_N-glycosylase_activity","termid":"PBO:0028381"}


id: GO:0070854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heavy chain of a myosin VI complex.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"},{"relation_name":"is_a","term_name":"myosin VI binding","termid":"GO:0070853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"myosin VI heavy chain binding","termid":"GO:0070854"}


id: PR:Q9C0Z9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15561:SF0","OMA:SCHPO01381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.10","secondary_identifiers":["UniProtKB:Q9C0Z9"],"synonyms":[{"name":"RNA polymerase III subunit C17 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CRCP","type":"exact"}],"termid":"PR:Q9C0Z9"}


id: GO:0061676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the importin-alpha family.","definition_xrefs":["PMID:17170104","PMID:23734157","PMID:15350979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"importin-alpha family protein binding","termid":"GO:0061676"}


id: PBO:0014299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe sprecific protein","termid":"PBO:0014299"}


id: MONDO:0005120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A virus infection induced by Drosophila C virus (DCV) which is a positive-sense RNA virus belonging to the Dicistroviridae family. This natural pathogen of the model organism Drosophila melanogaster is commonly used to investigate antiviral host-defense in flies, which involves both RNA interference and inducible responses.","definition_xrefs":["EFO:0000779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Drosophila C virus infection","secondary_identifiers":["PMID:25253354"],"synonyms":[{"name":"Drosophila C virus caused disease or disorder","type":"exact"},{"name":"Drosophila C virus disease or disorder","type":"exact"},{"name":"Drosophila C virus infectious disease","type":"exact"}],"termid":"MONDO:0005120","xrefs":{"Monarch":{"xref_id":"0005120"}}}


id: GO:0060833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell contributing to the specification of the animal/vegetal axis of an oocyte.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in animal/vegetal axis specification (obsolete GO:0060833)","synonyms":[{"name":"Wnt receptor signaling pathway involved in animal/vegetal axis specification","type":"exact"},{"name":"Wnt receptor signalling pathway involved in animal/vegetal axis specification","type":"exact"},{"name":"Wnt- activated signaling pathway involved in animal/vegetal axis specification","type":"exact"}],"termid":"GO:0060833"}


id: MONDO:0014113
data:
  {"annotated_genes":["SJAG_01181","SJAG_00993","SJAG_02342"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85353,85354,85355],"is_not":false,"summary":null,"term":"MONDO:0014113"}]},"cv_name":"mondo","definition":"Any cardiofaciocutaneous syndrome in which the cause of the disease is a mutation in the MAP2K1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiofaciocutaneous syndrome","termid":"MONDO:0015280"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005093"],"is_obsolete":false,"name":"cardiofaciocutaneous syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3809006","GARD:15936","DOID:0111462","MEDGEN:815336","OMIM:615279"],"synonyms":[{"name":"CFC3","type":"related"},{"name":"MAP2K1 cardiofaciocutaneous syndrome","type":"exact"},{"name":"cardiofaciocutaneous syndrome 3","type":"exact"},{"name":"cardiofaciocutaneous syndrome caused by mutation in MAP2K1","type":"exact"},{"name":"cardiofaciocutaneous syndrome type 3","type":"exact"}],"termid":"MONDO:0014113","terms_by_termid":{"MONDO:0014113":null},"xrefs":{"Monarch":{"xref_id":"0014113"}}}


id: GO:0010618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to aerenchyma, parenchyma tissue containing particularly large intercellular spaces of schizogenous or lysigenous origin. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["PO:0005702","PMID:18055613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerenchyma formation","termid":"GO:0010618"}


id: MONDO:0011395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the ABCA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"ABCA4-related retinopathy","termid":"MONDO:0800406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 3","secondary_identifiers":["DOID:0111013","GARD:10653","MESH:C565827","OMIM:604116","UMLS:C1858806","MEDGEN:349030"],"synonyms":[{"name":"ABCA4 cone-rod dystrophy","type":"exact"},{"name":"CORD3","type":"exact"},{"name":"cone-rod dystrophy 3","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in ABCA4","type":"exact"},{"name":"cone-rod dystrophy type 3","type":"exact"}],"termid":"MONDO:0011395","xrefs":{"Monarch":{"xref_id":"0011395"}}}


id: MONDO:0008065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal groove, familial transverse","secondary_identifiers":["MEDGEN:322400","OMIM:161500","UMLS:C1834370"],"synonyms":[{"name":"nasal groove, familial transverse","type":"exact"}],"termid":"MONDO:0008065","xrefs":{"Monarch":{"xref_id":"0008065"}}}


id: GO:0035515
data:
  {"annotated_genes":["SJAG_00892"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from one or more nucleosides within a RNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:16482161","PMID:12594517","PMID:18775698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"oxidative RNA demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8857692"],"synonyms":[{"name":"2-oxoglutarate-dependent RNA demethylase","type":"exact"}],"termid":"GO:0035515","terms_by_termid":{"GO:1990984":null}}


id: PBO:0001607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase (predicted)","termid":"PBO:0001607"}


id: PR:G2TRK6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9G1.14 gene.","definition_xrefs":["UniProtKB:G2TRK6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9G1.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.14","synonyms":[{"name":"Spom972h-SPAC9G1.14","type":"exact"}],"termid":"PR:G2TRK6"}


id: GO:1902610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a N-phenylthiourea stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","GOC:rjd","PMID:24006265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to N-phenylthiourea","termid":"GO:1902610"}


id: PBO:0054928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2342","termid":"PBO:0054928"}


id: GO:0106344
data:
  {"annotated_genes":["SJAG_04866"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114339],"is_not":false,"summary":null,"term":"GO:0106344"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe(3+) + 4 H2O + L-histidyl-[4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase] + N(6)-(pyridoxal phosphate)-L-lysyl-[4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase] = (2S)-2-amino-5-hydroxy-4-oxopentanoyl-[4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase] + 3-oxopropanoate + 4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine + 2 Fe(2+) + 2 H+ + L-lysyl-[4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase].","definition_xrefs":["RHEA:65756","PMID:22568620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase activity from histidine and PLP","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106344","terms_by_termid":{"GO:0106344":null}}


id: FYPO:0003150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO","termid":"FYPO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0005568"],"is_obsolete":false,"name":"decreased NETO","synonyms":[{"name":"decreased NETO during mitotic cell cycle","type":"related"},{"name":"decreased NETO during vegetative growth","type":"exact"},{"name":"decreased activation of bipolar cell growth","type":"related"},{"name":"decreased cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"decreased new end take-off","type":"exact"},{"name":"decreased switch from monopolar to bipolar cell growth","type":"exact"},{"name":"reduced NETO","type":"exact"}],"termid":"FYPO:0003150"}


id: GO:0030484
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The contractile fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete muscle fiber (obsolete GO:0030484)","synonyms":[{"name":"muscle fiber","type":"exact"},{"name":"muscle fibre","type":"exact"}],"termid":"GO:0030484"}


id: PBO:0090101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Cut9/Apc6","termid":"PBO:0090101"}


id: PBO:0069342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 602, pseudogene","termid":"PBO:0069342"}


id: GO:0036440
data:
  {"annotated_genes":["SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA.","definition_xrefs":["RHEA:16845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"citrate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:CITSYN-RXN","EC:2.3.3.16","KEGG_REACTION:R00351"],"termid":"GO:0036440","terms_by_termid":{"GO:0004108":null}}


id: PBO:0046987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member L, pseudogene","termid":"PBO:0046987"}


id: PBO:0036090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation_during_cellular_response_to_reactive_oxygen_species","termid":"PBO:0036090"}


id: GO:0106410
data:
  {"annotated_genes":["SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102486],"is_not":false,"summary":null,"term":"GO:0106410"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of a box C/D RNA molecule.","definition_xrefs":["PMID:34352089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box C/D sno(s)RNA processing","termid":"GO:0034963"},{"relation_name":"is_a","term_name":"snoRNA 2,2,7-trimethylguanosine (TMG) capping","termid":"GO:0180031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016074","GO:0008150"],"is_obsolete":false,"name":"box C/D sno(s)RNA 5'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106410","terms_by_termid":{"GO:0106410":null}}


id: PBO:0058880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10396b","termid":"PBO:0058880"}


id: GO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sulfur utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur utilization","termid":"GO:0006792"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"positively_regulates","term_name":"sulfur utilization","termid":"GO:0006791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sulfur utilization","synonyms":[{"name":"activation of sulfur utilization","type":"narrow"},{"name":"positive regulation of sulphur utilization","type":"exact"},{"name":"stimulation of sulfur utilization","type":"narrow"},{"name":"up regulation of sulfur utilization","type":"exact"},{"name":"up-regulation of sulfur utilization","type":"exact"},{"name":"upregulation of sulfur utilization","type":"exact"}],"termid":"GO:0045883"}


id: PATO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000347 sporophyte incompatible value (obsolete PATO:0000347)","termid":"PATO:0000347"}


id: GO:0090741
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane that is part of a pigment granule.","definition_xrefs":["PMID:11294610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"pigment granule membrane","termid":"GO:0090741"}


id: FYPO:0003929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to ionizing radiation.","definition_xrefs":["PMID:24847916","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spores sensitive to ionizing radiation","synonyms":[{"name":"sensitive to ionizing radiation in the spore phase","type":"exact"},{"name":"spores sensitive to IR","type":"exact"}],"termid":"FYPO:0003929"}


id: PBO:0053964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1273","termid":"PBO:0053964"}


id: PBO:0052020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction mediating and regulatory protein, p53 cofactor","termid":"PBO:0052020"}


id: PBO:0088630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane DUF2015 family conserved fungal protein","termid":"PBO:0088630"}


id: PBO:0042512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 17, pseudogene","termid":"PBO:0042512"}


id: PBO:0060795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 1","termid":"PBO:0060795"}


id: PBO:0013758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase Erg8 (predicted)","termid":"PBO:0013758"}


id: MONDO:0010713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hereditary, primary immunodeficiency due to a complement cascade protein anomaly characterized by significantly increased susceptibility to Neisseria species infections. It only affects males, typically presenting with severe or fulminant meningococcal disease.","definition_xrefs":["Orphanet:2966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"properdin deficiency, X-linked","secondary_identifiers":["GARD:4513","DOID:0111768","MESH:C537241","NANDO:2200789","UMLS:C1839454","OMIM:312060","MEDGEN:333322","ICD9:279.8","SCTID:81166004"],"synonyms":[{"name":"CFPD","type":"related"},{"name":"PFD","type":"related"},{"name":"complement Factor properdin deficiency","type":"related"},{"name":"properdin P Factor deficiency","type":"related"},{"name":"properdin deficiency, X-linked","type":"exact"},{"name":"properdin deficiency, X-linked, X-linked recessive","type":"exact"},{"name":"properdin deficiency, type 1","type":"related"},{"name":"properdin deficiency, type 2","type":"related"},{"name":"properdin deficiency, type 3","type":"related"}],"termid":"MONDO:0010713","xrefs":{"Monarch":{"xref_id":"0010713"}}}


id: PBO:0070363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 1","termid":"PBO:0070363"}


id: MONDO:0800201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"androgenetic alopecia","termid":"MONDO:0005339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baldness, male pattern","secondary_identifiers":["MEDGEN:904995","UMLS:C4083212"],"synonyms":[{"name":"MPB","type":"exact"}],"termid":"MONDO:0800201","xrefs":{"Monarch":{"xref_id":"0800201"}}}


id: PBO:0018201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-X homolog, FANCM-MHF complex subunit Mhf2","termid":"PBO:0018201"}


id: PBO:0053403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 333","termid":"PBO:0053403"}


id: MONDO:0016799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxidative phosphorylation disorder with no known mechanism (obsolete MONDO:0016799)","secondary_identifiers":["Orphanet:254822"],"synonyms":[{"name":"OXPHOS disease with no known mechanism","type":"exact"}],"termid":"MONDO:0016799","xrefs":{"Monarch":{"xref_id":"0016799"}}}


id: MONDO:0012857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disseminated superficial actinic porokeratosis","termid":"MONDO:0019212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 5, disseminated superficial actinic type","secondary_identifiers":["OMIM:612293","GARD:15551","UMLS:C2676769","MEDGEN:382935","MESH:C567356"],"synonyms":[{"name":"POROK5","type":"exact"},{"name":"porokeratosis 5, disseminated superficial actinic","type":"exact"},{"name":"porokeratosis 5, disseminated superficial actinic type","type":"exact"},{"name":"porokeratosis, disseminated superficial actinic, 3","type":"related"}],"termid":"MONDO:0012857","xrefs":{"Monarch":{"xref_id":"0012857"}}}


id: GO:0032673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-4 production.","definition_xrefs":["PMID:29778524","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-4 production","termid":"GO:0032633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-4 production","secondary_identifiers":["GO:0150133","GO:0045402"],"synonyms":[{"name":"regulation of IL-4 production","type":"exact"},{"name":"regulation of interleukin-4 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-4 secretion","type":"narrow"}],"termid":"GO:0032673"}


id: PBO:0083319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF IMA3/YIL172C","termid":"PBO:0083319"}


id: MOD:01813
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a morpholine-2-acetyl group for a hydrogen atom.","definition_xrefs":["Unimod:29","PubMed:10446193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morpholine-2-acetylated residue","synonyms":[{"name":"N-Succinimidyl-2-morpholine acetate","type":"related"},{"name":"N-succinimidylmorpholine-2-acetate derivative","type":"exact"},{"name":"SMA","type":"related"}],"termid":"MOD:01813"}


id: PBO:0036361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga3","termid":"PBO:0036361"}


id: PBO:0032711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_error-free_translesion_synthesis_of_cyclobutane_pyrimidine_dimers","termid":"PBO:0032711"}


id: PBO:0080398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS28 subunit of ESCRT-I","termid":"PBO:0080398"}


id: GO:0005859
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A filament of myosin found in a muscle cell of any type.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin II complex","termid":"GO:0016460"},{"relation_name":"part_of","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0015629"],"is_obsolete":false,"name":"muscle myosin complex","termid":"GO:0005859"}


id: PBO:0053432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 377","termid":"PBO:0053432"}


id: PBO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase (predicted)","termid":"PBO:0001084"}


id: FYPO:0001475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body is broken into fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"},{"relation_name":"is_a","term_name":"fragmented spindle pole body","termid":"FYPO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"fragmented mitotic spindle pole body","synonyms":[{"name":"fragmented mitotic SPB","type":"exact"},{"name":"fragmented spindle pole body during mitotic cell cycle","type":"exact"},{"name":"fragmented spindle pole body during vegetative growth","type":"exact"},{"name":"mitotic spindle pole body fragmentation","type":"exact"}],"termid":"FYPO:0001475"}


id: MONDO:1010824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndactyly that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"syndactyly, non-human animal","termid":"MONDO:1010160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly, chicken","secondary_identifiers":["OMIA:000963-9031"],"termid":"MONDO:1010824","xrefs":{"Monarch":{"xref_id":"1010824"}}}


id: GO:0045594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovarian cumulus cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of cumulus cell differentiation","termid":"GO:0045592"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"cumulus cell differentiation","termid":"GO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cumulus cell differentiation","synonyms":[{"name":"activation of cumulus cell differentiation","type":"narrow"},{"name":"positive regulation of ovarian cumulus cell differentiation","type":"exact"},{"name":"stimulation of cumulus cell differentiation","type":"narrow"},{"name":"up regulation of cumulus cell differentiation","type":"exact"},{"name":"up-regulation of cumulus cell differentiation","type":"exact"},{"name":"upregulation of cumulus cell differentiation","type":"exact"}],"termid":"GO:0045594"}


id: MONDO:1012172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"shivers, non-human animal","termid":"MONDO:1011926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shivers, horse","secondary_identifiers":["OMIA:000676-9796"],"termid":"MONDO:1012172","xrefs":{"Monarch":{"xref_id":"1012172"}}}


id: PBO:0053704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 906","termid":"PBO:0053704"}


id: GO:0071373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a luteinizing hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to luteinizing hormone","termid":"GO:0034699"},{"relation_name":"is_a","term_name":"cellular response to gonadotropin stimulus","termid":"GO:0071371"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to luteinizing hormone stimulus","termid":"GO:0071373"}


id: FYPO:0004597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which DNA replication is initiated at one or more origins during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:11532929","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"replication origin firing during mitotic G2 phase","synonyms":[{"name":"replication origin firing during G2 phase of mitotic cell cycle","type":"exact"},{"name":"replication origin firing during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004597"}


id: GO:0099612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to or maintained in a location within an axon.","definition_xrefs":["PMID:26157139","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to axon","termid":"GO:0099612"}


id: PBO:0065924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member of RAS oncogene family like 3","termid":"PBO:0065924"}


id: PBO:0063475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 3 pseudogene 2","termid":"PBO:0063475"}


id: PBO:0088753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptidyl-tRNA hydrolase Pth1","termid":"PBO:0088753"}


id: PBO:0091301
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript retaining intron IV represents 15% of total mRNA","termid":"PBO:0091301"}


id: PBO:0031370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_vegetative_cell","termid":"PBO:0031370"}


id: MONDO:0004767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the seminal vesicle.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orchitis","termid":"MONDO:0006882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesiculitis","secondary_identifiers":["MEDGEN:508285","NCIT:C12787","DOID:9365","UMLS:C0042588","SCTID:27001009","ICD9:608.0"],"synonyms":[{"name":"gland, seminal vesicle","type":"exact"},{"name":"inflammation of seminal vesicle","type":"exact"},{"name":"seminal Sacs","type":"exact"},{"name":"seminal vesicle","type":"exact"},{"name":"seminal vesicle inflammation","type":"exact"},{"name":"seminal vesicles","type":"exact"},{"name":"seminal vesiculitis","type":"exact"}],"termid":"MONDO:0004767","xrefs":{"Monarch":{"xref_id":"0004767"}}}


id: PR:Q10437
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bun62 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBP9-binding protein bun62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.03","synonyms":[{"name":"Spom972h-bun62","type":"exact"},{"name":"binding ubp9 protein of 62 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10437"}


id: GO:0048654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anther are generated and organized.","definition_xrefs":["GOC:jid","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"stamen morphogenesis","termid":"GO:0048448"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther morphogenesis","termid":"GO:0048654"}


id: GO:1900178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aflatoxin biosynthetic process.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of aflatoxin biosynthetic process","termid":"GO:1900177"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"negatively_regulates","term_name":"aflatoxin biosynthetic process","termid":"GO:0045122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of aflatoxin biosynthetic process","synonyms":[{"name":"down regulation of aflatoxin anabolism","type":"exact"},{"name":"down regulation of aflatoxin biosynthesis","type":"exact"},{"name":"down regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"down regulation of aflatoxin formation","type":"exact"},{"name":"down regulation of aflatoxin synthesis","type":"exact"},{"name":"down-regulation of aflatoxin anabolism","type":"exact"},{"name":"down-regulation of aflatoxin biosynthesis","type":"exact"},{"name":"down-regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"down-regulation of aflatoxin formation","type":"exact"},{"name":"down-regulation of aflatoxin synthesis","type":"exact"},{"name":"downregulation of aflatoxin anabolism","type":"exact"},{"name":"downregulation of aflatoxin biosynthesis","type":"exact"},{"name":"downregulation of aflatoxin biosynthetic process","type":"exact"},{"name":"downregulation of aflatoxin formation","type":"exact"},{"name":"downregulation of aflatoxin synthesis","type":"exact"},{"name":"inhibition of aflatoxin anabolism","type":"narrow"},{"name":"inhibition of aflatoxin biosynthesis","type":"narrow"},{"name":"inhibition of aflatoxin biosynthetic process","type":"narrow"},{"name":"inhibition of aflatoxin formation","type":"narrow"},{"name":"inhibition of aflatoxin synthesis","type":"narrow"},{"name":"negative regulation of aflatoxin anabolism","type":"exact"},{"name":"negative regulation of aflatoxin biosynthesis","type":"exact"},{"name":"negative regulation of aflatoxin formation","type":"exact"},{"name":"negative regulation of aflatoxin synthesis","type":"exact"}],"termid":"GO:1900178"}


id: PBO:0071995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 24","termid":"PBO:0071995"}


id: PBO:0051116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-1 (non-functional)","termid":"PBO:0051116"}


id: MONDO:0010752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"VACTERL/vater association","termid":"MONDO:0008642"},{"relation_name":"is_a","term_name":"VACTERL with hydrocephalus","termid":"MONDO:0010172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VACTERL association, X-linked, with or without hydrocephalus","secondary_identifiers":["GARD:15309","MEDGEN:419019","DOID:0111766","OMIM:314390","UMLS:C2931228"],"synonyms":[{"name":"VACTERL association with hydrocephaly, X-linked","type":"related"},{"name":"VACTERL association, X-linked, X-linked recessive","type":"exact"},{"name":"VACTERL association, X-linked, with or without hydrocephalus","type":"exact"},{"name":"VACTERL-H, X-linked","type":"related"},{"name":"VACTERLX","type":"related"},{"name":"X-linked VACTERL-H syndrome","type":"related"}],"termid":"MONDO:0010752","xrefs":{"Monarch":{"xref_id":"0010752"}}}


id: GO:1903409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of reactive oxygen species, any molecules or ions formed by the incomplete one-electron reduction of oxygen.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","PMID:24252804","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reactive oxygen species biosynthetic process","synonyms":[{"name":"ROS formation","type":"related"},{"name":"ROS generation","type":"related"},{"name":"reactive oxygen species anabolism","type":"exact"},{"name":"reactive oxygen species biosynthesis","type":"exact"},{"name":"reactive oxygen species formation","type":"exact"},{"name":"reactive oxygen species generation","type":"related"},{"name":"reactive oxygen species synthesis","type":"exact"}],"termid":"GO:1903409"}


id: GO:0061661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of FAT10 to a substrate protein via the reaction X-FAT10 + S = X + S-FAT10, where X is either an E2 or E3 enzyme, the X-FAT10 linkage is a thioester bond, and the S-FAT10 linkage is an isopeptide bond between the C-terminal glycine of FAT10 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAT10 transferase activity","termid":"GO:0019775"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0019787","GO:0140096","GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"FAT10 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061661"}


id: PBO:0048267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 5","termid":"PBO:0048267"}


id: MONDO:0015230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anophthalmia-megalocornea-cardiopathy-skeletal anomalies syndrome is a multiple congenital anomalies syndrome, reported in the offsprings of a consanguineous couple and characterized by multiple congenital skeletal (dolichocephaly, skull asymmetry, camptodactyly, clubfoot), muscular (muscle hypoplasia), ocular (anophthalmia, buphthalmos, retinal detachment, aniridia) and cardiac (prolapse of tricuspid valves, mitral and tricuspid insufficiency) abnormalities. An autosomal recessive inheritance with variable expressivity was suspected. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:1101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anophthalmia-megalocornea-cardiopathy-skeletal anomalies syndrome","secondary_identifiers":["UMLS:C4304035","GARD:717","SCTID:720495005","MEDGEN:929704"],"synonyms":[{"name":"Cassia Stocco dos Santos syndrome","type":"exact"},{"name":"anophthalmia megalocornea cardiopathy skeletal anomalies","type":"exact"}],"termid":"MONDO:0015230","xrefs":{"Monarch":{"xref_id":"0015230"}}}


id: GO:0052325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin biosynthetic process","termid":"GO:0045489"},{"relation_name":"is_a","term_name":"cell wall pectin metabolic process","termid":"GO:0052546"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"},{"relation_name":"part_of","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell wall pectin biosynthetic process","synonyms":[{"name":"cell wall pectin biosynthesis","type":"exact"},{"name":"pectin biosynthesis during cell wall organization and biogenesis","type":"related"}],"termid":"GO:0052325"}


id: GO:0004045
data:
  {"annotated_genes":["SJAG_05008","SJAG_05221","SJAG_00936","SJAG_00308"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76358,78138,98973,102391],"is_not":false,"summary":null,"term":"GO:0004045"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-L-alpha-aminoacyl-tRNA + H2O = an N-acyl-L-amino acid + a tRNA + H+.","definition_xrefs":["RHEA:54448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00936":null,"SJAG_05008":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0140098","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"peptidyl-tRNA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0019851","GO:0019850","EC:3.1.1.29","MetaCyc:AMINOCYL-TRNA-HYDROLASE-RXN"],"synonyms":[{"name":"D-tyrosyl-tRNA hydrolase activity","type":"narrow"},{"name":"N-substituted aminoacyl transfer RNA hydrolase activity","type":"related"},{"name":"aminoacyl-tRNA aminoacylhydrolase activity","type":"related"},{"name":"aminoacyl-tRNA hydrolase reaction","type":"exact"},{"name":"aminoacyl-transfer ribonucleate hydrolase activity","type":"related"}],"termid":"GO:0004045","terms_by_termid":{"GO:0004045":null}}


id: PBO:0028053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_meiotic_cell_cycle","termid":"PBO:0028053"}


id: PBO:0057692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1282","termid":"PBO:0057692"}


id: GO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II (RNAP II) regulatory transcription factor and also with the RNAP II basal transcription machinery in order to increase the frequency, rate or stability of the aggregation, arrangement and bonding together of proteins on RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC). Cofactors generally do not bind DNA, but rather mediate protein-protein interactions between activating transcription factors and the basal RNAP II transcription machinery.","definition_xrefs":["PMID:16858867","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly (obsolete GO:0001128)","synonyms":[{"name":"RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly","type":"exact"}],"termid":"GO:0001128"}


id: GO:0015826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of threonine, (2R*,3S*)-2-amino-3-hydroxybutanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"threonine transport","synonyms":[{"name":"L-threonine transport","type":"narrow"}],"termid":"GO:0015826"}


id: PBO:0063658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 3, pseudogene","termid":"PBO:0063658"}


id: MONDO:0957545
data:
  {"annotated_genes":["SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86696],"is_not":false,"summary":null,"term":"MONDO:0957545"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 2I","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1841321","OMIM:620462","UMLS:C5830685"],"termid":"MONDO:0957545","terms_by_termid":{"MONDO:0957545":null},"xrefs":{"Monarch":{"xref_id":"0957545"}}}


id: GO:0140534
data:
  {"annotated_genes":["SJAG_02065","SJAG_05348","SJAG_02914","SJAG_03345","SJAG_02776","SJAG_04090","SJAG_00064","SJAG_00959","SJAG_03737","SJAG_05278","SJAG_02867","SJAG_00277","SJAG_02875","SJAG_04370","SJAG_03115","SJAG_04956","SJAG_04119","SJAG_03955","SJAG_03261","SJAG_01929","SJAG_02804","SJAG_01134","SJAG_01127","SJAG_01349","SJAG_04294","SJAG_04127","SJAG_06383","SJAG_01166","SJAG_04451","SJAG_03801","SJAG_03416","SJAG_01709","SJAG_02208","SJAG_00175","SJAG_02330","SJAG_01305","SJAG_03311","SJAG_03841","SJAG_00924","SJAG_03672","SJAG_01006","SJAG_05414","SJAG_01051","SJAG_02913","SJAG_00360","SJAG_01999","SJAG_04881","SJAG_03066","SJAG_02588","SJAG_02437","SJAG_01223","SJAG_01178","SJAG_03292","SJAG_03930","SJAG_00846","SJAG_01558","SJAG_03710","SJAG_00295","SJAG_03280","SJAG_01389","SJAG_04821","SJAG_01750","SJAG_03333","SJAG_02354","SJAG_00790","SJAG_05274","SJAG_01240","SJAG_03535","SJAG_01940","SJAG_04384","SJAG_01069","SJAG_06425"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100341,76958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070939"},{"annotations":[72485,78651,75948,75050,80618,91989,101513,77274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072546"},{"annotations":[71041,79000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034663"},{"annotations":[110472,75206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[75104,70222,116941,70306,80404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032865"},{"annotations":[75380,114456,73175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043529"},{"annotations":[77233,78653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017177"},{"annotations":[116462,77992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990529"},{"annotations":[89875,91547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120097"},{"annotations":[58329,93321,77813,71273,108906,93412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000506"},{"annotations":[70976,71177,75698,74876,74874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042765"},{"annotations":[109888,105137,107990,105622,117484,89577,104284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"},{"annotations":[102888,74629,63291,100352,79079,75693,79521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008250"},{"annotations":[108720,91567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160005"},{"annotations":[63933,106496,109659,98370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005784"},{"annotations":[96057,70258,90908,73499],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031207"},{"annotations":[61961,68187,74232,66011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005787"},{"annotations":[69274,94601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005785"},{"annotations":[98371,108630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071261"},{"annotations":[98661,103889,75315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043541"},{"annotations":[70981,75830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"A protein complex that is part of an endoplasmic reticulum.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"endoplasmic 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reticulum protein-containing complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140534","terms_by_termid":{"GO:0000506":null,"GO:0000836":null,"GO:0005784":null,"GO:0005785":null,"GO:0005787":null,"GO:0008250":null,"GO:0017177":null,"GO:0031207":null,"GO:0031211":null,"GO:0032865":null,"GO:0034098":null,"GO:0034663":null,"GO:0042765":null,"GO:0043529":null,"GO:0043541":null,"GO:0070939":null,"GO:0071261":null,"GO:0072546":null,"GO:0120097":null,"GO:0160005":null,"GO:1990529":null}}


id: GO:0046469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"is_a","term_name":"ether lipid metabolic process","termid":"GO:0046485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"platelet activating factor metabolic process","synonyms":[{"name":"PAF metabolic process","type":"exact"},{"name":"PAF metabolism","type":"exact"},{"name":"platelet activating factor metabolism","type":"exact"}],"termid":"GO:0046469"}


id: GO:0050898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitriles, an organic compound containing trivalent nitrogen attached to one carbon atom. The nitriles are named with reference to the acids produced by their decomposition; for example, hydrocyanic acid is formic nitrile, and methyl cyanide is acetic nitrile.","definition_xrefs":["PMID:18987211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrile metabolic process","synonyms":[{"name":"nitrile metabolism","type":"exact"}],"termid":"GO:0050898"}


id: PR:G2TRK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A5.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.19","synonyms":[{"name":"Spom972h-SPAC17A5.19","type":"exact"}],"termid":"PR:G2TRK1"}


id: PBO:0054461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1858","termid":"PBO:0054461"}


id: GO:0072013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the glomus over time from its initial formation until its mature state. The glomus forms from the splanchnic intermediate mesoderm and is the vascularized filtration unit, filtering the blood before it enters the tubules. The glomus is external to the nephron and extends over more than one body segment.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:9268568","PMID:10572058","PMID:15647339","XAO:0000318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomus development","synonyms":[{"name":"pronephric glomus development","type":"exact"}],"termid":"GO:0072013"}


id: PR:P87126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.11c","synonyms":[{"name":"Spom972h-cwf2","type":"exact"},{"name":"complexed with cdc5 protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-processing protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87126"}


id: MONDO:0015424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal chondrodysplasia, Moerman type (obsolete MONDO:0015424)","secondary_identifiers":["GARD:3225","Orphanet:1420"],"synonyms":[{"name":"Moerman-Vandenberghe-Fryns syndrome","type":"exact"},{"name":"lethal chondrodysplasia Moerman type","type":"related"}],"termid":"MONDO:0015424","xrefs":{"Monarch":{"xref_id":"0015424"}}}


id: PBO:0116220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase (ATP-hydrolyzing), Oxp2","termid":"PBO:0116220"}


id: PBO:0066304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 7","termid":"PBO:0066304"}


id: GO:0047921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + gentamicin C(1a) = N(2')-acetylgentamicin C(1a) + CoA + H+. This is acetylation of the 2'-amino group of the 6-deoxy-6-aminoglucose ring.","definition_xrefs":["RHEA:24516","EC:2.3.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside 2'-N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03056","MetaCyc:GENTAMICIN-2-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:gentamicin-C1a N2'-acetyltransferase activity","type":"narrow"},{"name":"acetyl-CoA:gentamycin-C1a N2'-acetyltransferase activity","type":"narrow"},{"name":"gentamicin 2'-N-acetyltransferase activity","type":"narrow"},{"name":"gentamicin acetyltransferase II activity","type":"narrow"},{"name":"gentamycin 2'-N-acetyltransferase activity","type":"narrow"},{"name":"gentamycin acetyltransferase II","type":"related"}],"termid":"GO:0047921"}


id: GO:0016515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-13 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-13 receptor activity","synonyms":[{"name":"IL-13 receptor activity","type":"exact"},{"name":"IL-13R","type":"exact"}],"termid":"GO:0016515"}


id: MONDO:0009951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiculoneuropathy, fatal neonatal","secondary_identifiers":["OMIM:266250","UMLS:C1849471","MESH:C564857","MEDGEN:376592"],"synonyms":[{"name":"Radiculoneuropathy, fatal neonatal","type":"exact"}],"termid":"MONDO:0009951","xrefs":{"Monarch":{"xref_id":"0009951"}}}


id: PBO:0003517
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Missegregation and Lethal when Overexpressed","termid":"PBO:0003517"}


id: GO:0031448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fast-twitch skeletal muscle contraction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_muscle","GOC:ef","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fast-twitch skeletal muscle fiber contraction","termid":"GO:0031446"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"},{"relation_name":"positively_regulates","term_name":"fast-twitch skeletal muscle fiber contraction","termid":"GO:0031443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"activation of fast-twitch skeletal muscle contraction","type":"narrow"},{"name":"positive regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"stimulation of fast-twitch skeletal muscle contraction","type":"narrow"},{"name":"up regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"up-regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"upregulation of fast-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031448"}


id: MONDO:0013505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the DPY19L2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"male infertility due to globozoospermia","termid":"MONDO:0015746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 9","secondary_identifiers":["GARD:15735","OMIM:613958","MEDGEN:462757","DOID:0070175","DOID:0111156","UMLS:C3151407"],"synonyms":[{"name":"DPY19L2 azoospermia","type":"exact"},{"name":"SPGF9","type":"related"},{"name":"azoospermia caused by mutation in DPY19L2","type":"exact"},{"name":"globozoospermia, complete","type":"related"},{"name":"globozoospermia, total","type":"related"},{"name":"spermatogenic failure 9","type":"exact"},{"name":"spermatogenic failure type 9","type":"exact"}],"termid":"MONDO:0013505","xrefs":{"Monarch":{"xref_id":"0013505"}}}


id: PBO:0016926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Mug99","termid":"PBO:0016926"}


id: MONDO:0010204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal acid lipase deficiency (obsolete MONDO:0010204)","termid":"MONDO:0010204","xrefs":{"Monarch":{"xref_id":"0010204"}}}


id: PBO:0056323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 6","termid":"PBO:0056323"}


id: MONDO:1011692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein C deficiency, non-human animal","secondary_identifiers":["OMIA:000835"],"termid":"MONDO:1011692","xrefs":{"Monarch":{"xref_id":"1011692"}}}


id: PBO:0017495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyketide cyclase SnoaL-like domain protein","termid":"PBO:0017495"}


id: PBO:0049840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEATR3 antisense RNA 1","termid":"PBO:0049840"}


id: GO:1904706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell proliferation.","definition_xrefs":["PMID:23246467","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell proliferation","termid":"GO:0048662"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell proliferation","termid":"GO:1904705"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell proliferation","termid":"GO:1990874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell proliferation","synonyms":[{"name":"down regulation of VSMC proliferation","type":"exact"},{"name":"down regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"down-regulation of VSMC proliferation","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"downregulation of VSMC proliferation","type":"exact"},{"name":"downregulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"inhibition of VSMC proliferation","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell proliferation","type":"narrow"},{"name":"negative regulation of VSMC proliferation","type":"exact"},{"name":"negative regulation of vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1904706"}


id: GO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"regulation of defense response to fungus","termid":"GO:1900150"},{"relation_name":"regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antifungal peptide production","termid":"GO:0002788"}


id: GO:0009793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"embryo development","termid":"GO:0009790"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo development ending in seed dormancy","synonyms":[{"name":"embryogenesis","type":"broad"}],"termid":"GO:0009793"}


id: PBO:0063133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0063133"}


id: PBO:0046594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 4","termid":"PBO:0046594"}


id: GO:0090174
data:
  {"annotated_genes":["SJAG_04513","SJAG_04978","SJAG_03403","SJAG_00171","SJAG_03536","SJAG_02241","SJAG_04023","SJAG_01324","SJAG_00380","SJAG_03552","SJAG_03848","SJAG_05184","SJAG_02587","SJAG_01697","SJAG_03347","SJAG_03889","SJAG_00430","SJAG_00810","SJAG_00826","SJAG_00557","SJAG_02595","SJAG_04739","SJAG_01633","SJAG_01379","SJAG_03670","SJAG_00204","SJAG_02315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[79937,100037,74910,71582,99835,77449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[96268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[78968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"},{"annotations":[75993],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[113018,76535,78343,117884,101404,72353,90904,76900,117839,78049,98420,109980,101177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[74227,57752,78097,76495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The joining of two lipid bilayers to form a single organelle membrane.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00810":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_02595":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"organelle membrane fusion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090174","terms_by_termid":{"GO:0006906":null,"GO:0016320":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null,"GO:0048288":null}}


id: PBO:0071495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 36","termid":"PBO:0071495"}


id: GO:0035994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a myofibril being extended beyond its slack length.","definition_xrefs":["GOC:vk","GOC:BHF","PMID:14583192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muscle stretch","termid":"GO:0035994"}


id: FYPO:0005002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated, and the nucleus undergoes oscillatory movement around its normal location.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:16611238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"elongated vegetative cell with oscillating nucleus","synonyms":[{"name":"elongated cell with oscillating nucleus during vegetative growth","type":"exact"},{"name":"elongated vegetative cell with oscillating nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005002"}


id: PBO:0091583
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RAD1","termid":"PBO:0091583"}


id: GO:0007011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the organization, biogenesis or maintenance of the cytoskeleton.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytoskeleton (obsolete GO:0007011)","synonyms":[{"name":"regulation of cytoskeleton","type":"exact"}],"termid":"GO:0007011"}


id: PBO:0035962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_astral_microtubule_nucleation_during_mitosis","termid":"PBO:0035962"}


id: GO:0009480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class IIb cytochrome c (obsolete GO:0009480)","synonyms":[{"name":"class IIb cytochrome c","type":"exact"}],"termid":"GO:0009480"}


id: GO:1901057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trimethylenediamine.","definition_xrefs":["GOC:yaf","UniPathway:UPA00010","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"trimethylenediamine metabolic process","termid":"GO:1901055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimethylenediamine biosynthetic process","synonyms":[{"name":"trimethylenediamine anabolism","type":"exact"},{"name":"trimethylenediamine biosynthesis","type":"exact"},{"name":"trimethylenediamine formation","type":"exact"},{"name":"trimethylenediamine synthesis","type":"exact"}],"termid":"GO:1901057"}


id: PBO:0070821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13","termid":"PBO:0070821"}


id: GO:0071235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a proline stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to proline","termid":"GO:0010238"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to proline","termid":"GO:0071235"}


id: MONDO:0859598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute erythroid leukemia characterized by the presence of at least 50% erythroid precursors and at least 20% myeloblasts in the bone marrow.","definition_xrefs":["DOID:0080916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute erythroid leukemia","termid":"MONDO:0017858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"erythroleukemia","secondary_identifiers":["UMLS:C4520840","NCIT:C7152","MEDGEN:1614281"],"termid":"MONDO:0859598","xrefs":{"Monarch":{"xref_id":"0859598"}}}


id: GO:0007394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in shape of cells at the dorsal-most (leading) edge of the epidermis from being polygonal to being elongated in the dorsal/ventral axis.","definition_xrefs":["PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"},{"relation_name":"is_a","term_name":"regulation of embryonic cell shape","termid":"GO:0016476"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"initiation of dorsal closure","termid":"GO:0007392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, elongation of leading edge cells","termid":"GO:0007394"}


id: PR:O14336
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug80 gene.","definition_xrefs":["UniProtKB:O14336","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 80 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.03","synonyms":[{"name":"Spom972h-mug80","type":"exact"}],"termid":"PR:O14336"}


id: PBO:0039591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 8","termid":"PBO:0039591"}


id: MONDO:1011488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complement component 3 deficiency that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement component 3 deficiency, non-human animal","termid":"MONDO:1011421"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 3 deficiency, domestic guinea pig","secondary_identifiers":["OMIA:000155-10141"],"synonyms":[{"name":"C3 deficiency, domestic guinea pig","type":"exact"}],"termid":"MONDO:1011488","xrefs":{"Monarch":{"xref_id":"1011488"}}}


id: GO:0043202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the lysosomal membrane.","definition_xrefs":["GOC:jl","PMID:15213228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"lysosomal lumen","termid":"GO:0043202"}


id: PBO:0092004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large subunit (21S) rRNA, rnl","termid":"PBO:0092004"}


id: GO:0048689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a growth cone in an injured axon.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of growth cone in injured axon","termid":"GO:0048689"}


id: PBO:0060816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal EF-hand calcium binding protein 1","termid":"PBO:0060816"}


id: PBO:0034708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WLM domain metallopeptidase implicated in DNA repair Wss1 (predicted)","termid":"PBO:0034708"}


id: MONDO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital hypothyroidism (obsolete MONDO:0000311)","termid":"MONDO:0000311","xrefs":{"Monarch":{"xref_id":"0000311"}}}


id: GO:1902764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of embryonic skeletal joint development.","definition_xrefs":["GO_REF:0000058","PMID:16575901","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of embryonic skeletal joint development","termid":"GO:1902762"},{"relation_name":"positively_regulates","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of embryonic skeletal joint development","synonyms":[{"name":"activation of embryonic skeletal joint development","type":"narrow"},{"name":"up regulation of embryonic skeletal joint development","type":"exact"},{"name":"up-regulation of embryonic skeletal joint development","type":"exact"},{"name":"upregulation of embryonic skeletal joint development","type":"exact"}],"termid":"GO:1902764"}


id: PBO:0057765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2054","termid":"PBO:0057765"}


id: MONDO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the pericardium.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart cancer","termid":"MONDO:0001340"},{"relation_name":"is_a","term_name":"neoplasm of pericardium","termid":"MONDO:0021381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005267"],"is_obsolete":false,"name":"pericardium cancer","secondary_identifiers":["UMLS:C0346609","NCIT:C4567","DOID:116","MEDGEN:87561"],"synonyms":[{"name":"cancer of pericardium","type":"exact"},{"name":"malignant neoplasm of pericardium","type":"exact"},{"name":"malignant neoplasm of the pericardium","type":"exact"},{"name":"malignant pericardial neoplasm","type":"exact"},{"name":"malignant pericardial tumor","type":"exact"},{"name":"malignant pericardial tumour","type":"exact"},{"name":"malignant pericardium neoplasm","type":"exact"},{"name":"malignant tumor of pericardium","type":"exact"},{"name":"malignant tumor of the pericardium","type":"exact"},{"name":"malignant tumour of pericardium","type":"exact"},{"name":"malignant tumour of the pericardium","type":"exact"},{"name":"pericardial tumor","type":"broad"},{"name":"pericardial tumour","type":"broad"},{"name":"pericardium cancer","type":"exact"}],"termid":"MONDO:0001322","xrefs":{"Monarch":{"xref_id":"0001322"}}}


id: GO:0006249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dCMP, deoxycytidine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009178"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dCMP metabolic process","termid":"GO:0046063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dCMP catabolic process","synonyms":[{"name":"dCMP breakdown","type":"exact"},{"name":"dCMP catabolism","type":"exact"},{"name":"dCMP degradation","type":"exact"}],"termid":"GO:0006249"}


id: GO:0030124
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An AP-type membrane coat adaptor complex that consists of beta4, epsilon, mu4 and sigma4 subunits and is found associated with membranes in the trans-Golgi network; it is not clear whether AP-4 forms clathrin coats in vivo.","definition_xrefs":["GOC:mah","PMID:10611976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"AP-4 adaptor complex","termid":"GO:0030124"}


id: PBO:0051862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 2 pseudogene 1","termid":"PBO:0051862"}


id: PBO:0077492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM212 antisense RNA 1","termid":"PBO:0077492"}


id: GO:1903977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glial cell migration.","definition_xrefs":["GOC:BHF","PMID:19100238","GO_REF:0000058","GOC:TermGenie","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"positively_regulates","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell migration","synonyms":[{"name":"activation of glia cell migration","type":"narrow"},{"name":"activation of glial cell migration","type":"narrow"},{"name":"positive regulation of glia cell migration","type":"exact"},{"name":"up regulation of glia cell migration","type":"exact"},{"name":"up regulation of glial cell migration","type":"exact"},{"name":"up-regulation of glia cell migration","type":"exact"},{"name":"up-regulation of glial cell migration","type":"exact"},{"name":"upregulation of glia cell migration","type":"exact"},{"name":"upregulation of glial cell migration","type":"exact"}],"termid":"GO:1903977"}


id: FYPO:0008128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing low glucose. This term refers to situations where glucose is below 0.2%.","definition_xrefs":["PMID:37859837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"decreased vegetative cell population growth on low glucose","termid":"FYPO:0008128"}


id: FYPO:0005844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K9 trimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me3 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished silent mating-type cassette histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 trimethylation abolished at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0005844"}


id: PATO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000458 presence value (obsolete PATO:0000458)","termid":"PATO:0000458"}


id: GO:0004240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal transit peptides from precursor proteins imported into the mitochondrion, typically with Arg in position P2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial processing peptidase activity (obsolete GO:0004240)","synonyms":[{"name":"MPP","type":"exact"},{"name":"alpha-mitochondrial processing peptidase","type":"narrow"},{"name":"beta-mitochondrial processing peptidase","type":"narrow"},{"name":"matrix peptidase","type":"related"},{"name":"matrix processing peptidase","type":"related"},{"name":"matrix processing proteinase","type":"related"},{"name":"mitochondrial processing peptidase activity","type":"exact"},{"name":"mitochondrial protein precursor-processing proteinase activity","type":"related"},{"name":"processing enhancing peptidase (for one of two subunits)","type":"related"},{"name":"processing enhancing peptidase activity","type":"narrow"}],"termid":"GO:0004240"}


id: PBO:0072488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 17","termid":"PBO:0072488"}


id: GO:0050907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a chemical stimulus is received and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"part_of","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of chemical stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory transduction of chemical stimulus during sensory perception","type":"exact"}],"termid":"GO:0050907"}


id: PBO:0114524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex WD repeat subunit Hif2","termid":"PBO:0114524"}


id: PBO:0060812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear paraspeckle assembly transcript 1","termid":"PBO:0060812"}


id: MONDO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess that is located in the spleen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splenic disorder","termid":"MONDO:0002332"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"splenic abscess","secondary_identifiers":["SCTID:82053000","ICD10CM:D73.3","UMLS:C0272412","DOID:2530","MEDGEN:124428","NCIT:C35347","HP:0025059","ICD9:289.59"],"synonyms":[{"name":"splenic abscess","type":"exact"},{"name":"splenic abscess (disease)","type":"exact"}],"termid":"MONDO:0002333","xrefs":{"Monarch":{"xref_id":"0002333"}}}


id: PBO:0051735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 6","termid":"PBO:0051735"}


id: MOD:01358
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - Use when labelling post-digest","definition_xrefs":["Unimod:687#N-term","PubMed:15602776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form - site N-term","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form","type":"related"},{"name":"ICPL:2H(4)","type":"related"}],"termid":"MOD:01358"}


id: PBO:0050417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D pseudogene 1","termid":"PBO:0050417"}


id: MONDO:0013681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder caused by mutation in the AMACR gene. Racemization is the prerequisite to beta-oxidation for branched chain fatty acids and bile acids. It is characterized by neurological abnormalities that appear in adulthood and include cognitive decline, seizures, and sensorimotor neuropathy. AMACR deficiency rarely presents as liver disease in infancy.","definition_xrefs":["NCIT:C119677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"alpha-methylacyl-CoA racemase deficiency","secondary_identifiers":["UMLS:C3280428","DOID:0060602","NANDO:1200768","MEDGEN:482058","SCTID:700463002","GARD:15787","OMIM:614307","MESH:C565768","EFO:1001980"],"synonyms":[{"name":"AMACR","type":"exact"},{"name":"AMACR deficiency","type":"exact"},{"name":"AMACRD","type":"related"},{"name":"alpha-methylacyl-CoA racemase deficiency","type":"exact"}],"termid":"MONDO:0013681","xrefs":{"Monarch":{"xref_id":"0013681"}}}


id: PBO:0088747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Gsf1","termid":"PBO:0088747"}


id: MONDO:0012211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The CDG (Congenital Disorders of Glycosylation) syndromes are a group of autosomal recessive disorders affecting glycoprotein synthesis. CDG syndrome type If is characterized by psychomotor delay, seizures, failure to thrive, and cutaneous and ocular anomalies.","definition_xrefs":["Orphanet:79323"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"MPDU1-congenital disorder of glycosylation","secondary_identifiers":["GARD:9832","MESH:C535744","OMIM:609180","DOID:0080558","SCTID:724096007","MEDGEN:322968","NCIT:C126872","UMLS:C1836669"],"synonyms":[{"name":"CDG 1F","type":"related"},{"name":"CDG If","type":"related"},{"name":"CDG syndrome type If","type":"exact"},{"name":"CDG-If","type":"exact"},{"name":"CDG1F","type":"exact"},{"name":"CDGIf","type":"exact"},{"name":"MPDU1-CDG","type":"exact"},{"name":"MPDU1-CDG (CDG-If)","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type If","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1F","type":"related"},{"name":"congenital disorder of glycosylation type 1f","type":"exact"},{"name":"congenital disorder of glycosylation type If","type":"exact"},{"name":"congenital disorder of glycosylation, type If","type":"related"}],"termid":"MONDO:0012211","xrefs":{"Monarch":{"xref_id":"0012211"}}}


id: GO:1905719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the perinuclear region of the cytoplasm.","definition_xrefs":["GO_REF:0000087","PMID:15177031","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to perinuclear region of cytoplasm","synonyms":[{"name":"protein localisation in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localisation to perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization to perinuclear cytoplasm","type":"exact"}],"termid":"GO:1905719"}


id: PBO:0091207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln","termid":"PBO:0091207"}


id: FYPO:0000373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of RNA modification is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"decreased rate of RNA modification","synonyms":[{"name":"RNA modification: decreased rate","type":"related"},{"name":"decreased rate of RNA modification during mitotic cell cycle","type":"related"},{"name":"decreased rate of RNA modification during vegetative growth","type":"exact"},{"name":"reduced rate of RNA modification","type":"exact"}],"termid":"FYPO:0000373"}


id: PBO:0081636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 564","termid":"PBO:0081636"}


id: GO:0003935
data:
  {"annotated_genes":["SJAG_00376","SJAG_04711"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58733,60235],"is_not":false,"summary":null,"term":"GO:0003935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + 4 H2O = 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + formate + 3 H+ + 2 phosphate.","definition_xrefs":["EC:3.5.4.25","RHEA:23704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase activity","termid":"GO:0003933"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"GTP cyclohydrolase II activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["KEGG_REACTION:R00425","MetaCyc:GTP-CYCLOHYDRO-II-RXN"],"synonyms":[{"name":"GTP 7,8-8,9-dihydrolase (diphosphate-forming)","type":"related"},{"name":"GTP-8-formylhydrolase activity","type":"related"},{"name":"guanosine triphosphate cyclohydrolase II","type":"related"}],"termid":"GO:0003935","terms_by_termid":{"GO:0003935":null}}


id: MONDO:0004157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic mucinous cystadenoma (obsolete MONDO:0004157)","termid":"MONDO:0004157","xrefs":{"Monarch":{"xref_id":"0004157"}}}


id: GO:0019823
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P5 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005575","GO:0005777","GO:0005737"],"is_obsolete":false,"name":"P5 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019823"}


id: GO:0098812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end of a rRNA, occurring as part of the process of polyadenylation-dependent rRNA catabolism in the nucleus.","definition_xrefs":["GOC:jl","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear rRNA polyadenylation involved in polyadenylation-dependent rRNA catabolic process (obsolete GO:0098812)","synonyms":[{"name":"nuclear rRNA polyadenylation during polyadenylation-dependent rRNA catabolic process","type":"related"},{"name":"nuclear rRNA polyadenylation involved in poly(A)-dependent rRNA catabolic process","type":"related"}],"termid":"GO:0098812"}


id: PBO:0071750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 6","termid":"PBO:0071750"}


id: PBO:0028173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0028173"}


id: MONDO:0011338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory condition characterized by erythroderma, desquamation, alopecia, chronic diarrhea, failure to thrive, lymphadenopathy, and hepatosplenomegaly, associated with severe combined immunodeficiency (SCID).","definition_xrefs":["Orphanet:39041"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Omenn syndrome","secondary_identifiers":["MedDRA:10069097","GARD:8198","MEDGEN:398130","SCTID:722067005","UMLS:C2700553","DOID:0060010","NANDO:1200324","NANDO:2200697","NCIT:C61240","OMIM:603554"],"synonyms":[{"name":"Omenn syndrome","type":"exact"},{"name":"combined immunodeficiency with hypereosinophilia","type":"exact"},{"name":"reticuloendotheliosis familial with eosinophilia","type":"related"},{"name":"reticuloendotheliosis, familial, with eosinophilia","type":"related"},{"name":"severe combined immunodeficiency with hypereosinophilia","type":"related"}],"termid":"MONDO:0011338","xrefs":{"Monarch":{"xref_id":"0011338"}}}


id: GO:0102517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z)-octadecenoate + AH2 + O2 = (12R)-hydroxy-(9Z)-octadecenoate + acceptor + H2O.","definition_xrefs":["RHEA:55956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oleate 12-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14487"],"termid":"GO:0102517"}


id: PBO:0091673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glycerophosphodiester transmembrane transporter","termid":"PBO:0091673"}


id: GO:0043157
data:
  {"annotated_genes":["SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment.","definition_xrefs":["GOC:jl","PMID:14762213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cation stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043157","terms_by_termid":{"GO:0071473":null}}


id: MONDO:0009112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any rhizomelic chondrodysplasia punctata in which the cause of the disease is a mutation in the GNPAT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhizomelic chondrodysplasia punctata","termid":"MONDO:0015776"},{"relation_name":"is_a","term_name":"glyceronephosphate O-acyltransferase deficiency","termid":"MONDO:0100273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005328","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"rhizomelic chondrodysplasia punctata type 2","secondary_identifiers":["OMIM:222765","MESH:C537607","DOID:0110852","Orphanet:309796","NANDO:1200771","MEDGEN:341734","GARD:9429","UMLS:C1857242","icd11.foundation:179969811"],"synonyms":[{"name":"Dhapat deficiency","type":"exact"},{"name":"Dihydroxyacetonephosphate acyltransferase deficiency","type":"exact"},{"name":"GNPAT rhizomelic chondrodysplasia punctata","type":"exact"},{"name":"Glyceronephosphate O-acyltransferase deficiency","type":"exact"},{"name":"Gnpat deficiency","type":"exact"},{"name":"RCDP2","type":"exact"},{"name":"Rcdp2","type":"exact"},{"name":"chondrodysplasia punctata, rhizomelic, due to Dihydroxyacetonephosphate acyltransferase deficiency","type":"exact"},{"name":"chondrodysplasia punctata, rhizomelic, due to dihydroxyacetonephosphate","type":"related"},{"name":"peroxisomal dihydroxyacetonephosphate acyltransferase deficiency","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata caused by mutation in GNPAT","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata type 2","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata, type 2","type":"exact"},{"name":"type 2 rhizomelic chondrodysplasia punctata","type":"exact"}],"termid":"MONDO:0009112","xrefs":{"Monarch":{"xref_id":"0009112"}}}


id: MONDO:0020644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-Hodgkin lymphoma that arises in and is confined to the lung at the time of diagnosis. Representative examples include bronchial mucosa-associated lymphoid tissue lymphoma and diffuse large B-cell lymphoma.","definition_xrefs":["NCIT:C5684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung lymphoma","termid":"MONDO:0003987"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"lung non-Hodgkin lymphoma","secondary_identifiers":["MEDGEN:235267","UMLS:C1334453"],"synonyms":[{"name":"lung non-Hodgkin lymphoma","type":"exact"},{"name":"lung non-Hodgkin's lymphoma","type":"exact"},{"name":"non-Hodgkin lymphoma of lung","type":"exact"},{"name":"primary lung non-Hodgkin's lymphoma","type":"exact"}],"termid":"MONDO:0020644","xrefs":{"Monarch":{"xref_id":"0020644"}}}


id: PBO:0082311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartyl-tRNA synthetase, primarily cytoplasmic; homodimeric enzyme that catalyzes the specific aspartylation of tRNA(Asp); class II aminoacyl tRNA synthetase; binding to its own mRNA may confer autoregulation; shares five highly conserved amino acids with human that when mutated cause leukoencephalopathy characterized by hypomyelination with brain stem and spinal cord involvement and leg spasticity (HBSL)","termid":"PBO:0082311"}


id: FYPO:0000413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which plasma membrane fusion involved in cytogamy does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell fusion during mating","termid":"FYPO:0000412"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000301","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell fusion during mating","synonyms":[{"name":"abolished cell fusion during conjugation","type":"exact"},{"name":"abolished plasma membrane fusion involved in cytogamy","type":"exact"},{"name":"absent cell fusion during mating","type":"exact"},{"name":"cell fusion abolished during mating","type":"exact"},{"name":"cell fusion: absent","type":"related"}],"termid":"FYPO:0000413"}


id: PATO:0001243
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of blue hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blue","termid":"PATO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light blue","termid":"PATO:0001243"}


id: GO:0010124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylacetate.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"phenylacetate catabolic process","secondary_identifiers":["MetaCyc:PWY0-321"],"synonyms":[{"name":"phenylacetate breakdown","type":"exact"},{"name":"phenylacetate catabolism","type":"exact"},{"name":"phenylacetate degradation","type":"exact"}],"termid":"GO:0010124"}


id: MONDO:0100004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinically defined disease states with a largely unknown morphological background. Acute mast cell activation (MCA) is commonly seen in allergic reactions and often leads to the clinical signs and symptoms of anaphylaxis. Severe or even life‐threatening MCA may occur when the burden of mast cells is high and/or these cells are in an hyperactivated state. Mastocytosis may be associated with mast cell activation syndrome (MCAS).","definition_xrefs":["MedDRA:10075217","PMID:22555026","PMID:23409940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"mast cell activation syndrome","secondary_identifiers":["MEDGEN:1698540","MESH:D000090267","UMLS:C5200989","GARD:12981"],"synonyms":[{"name":"MACS","type":"exact"},{"name":"disorder of mast cell activation","type":"exact"},{"name":"mast cell activation disease","type":"exact"}],"termid":"MONDO:0100004","xrefs":{"Monarch":{"xref_id":"0100004"}}}


id: GO:0014904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a myotube cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell development","termid":"GO:0055002"},{"relation_name":"part_of","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotube cell development","termid":"GO:0014904"}


id: MONDO:0024524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete pigmentation disease (obsolete MONDO:0006600)","termid":"MONDO:0006600"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic skin disease (obsolete MONDO:0024255)","termid":"MONDO:0024255"},{"relation_name":"is_a","term_name":"dyschromatosis universalis hereditaria","termid":"MONDO:0000736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyschromatosis universalis hereditaria 1","secondary_identifiers":["MESH:C567273","UMLS:C2675711","OMIM:127500","MEDGEN:390864"],"synonyms":[{"name":"DUH1","type":"exact"},{"name":"dyschromatosis universalis hereditaria 1","type":"exact"}],"termid":"MONDO:0024524","xrefs":{"Monarch":{"xref_id":"0024524"}}}


id: GO:0060899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neurectodermal cell to a specialized neurectodermal cell that will give rise to the optic vesicle.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in eye field cell fate commitment of camera-type eye (obsolete GO:0060899)","termid":"GO:0060899"}


id: PATO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant","termid":"PATO:0001227"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability","synonyms":[{"name":"low variability","type":"exact"}],"termid":"PATO:0001583"}


id: PBO:0065528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 3 (gene/pseudogene)","termid":"PBO:0065528"}


id: PBO:0040608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAH domain and coiled-coil containing 1","termid":"PBO:0040608"}


id: GO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H+.","definition_xrefs":["RHEA:17157","EC:2.7.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"creatine kinase activity","secondary_identifiers":["MetaCyc:CREATINE-KINASE-RXN","Reactome:R-HSA-200326","Reactome:R-HSA-200318","KEGG_REACTION:R01881"],"synonyms":[{"name":"ATP:creatine N-phosphotransferase activity","type":"related"},{"name":"ATP:creatine phosphotransferase activity","type":"related"},{"name":"BB-CK","type":"related"},{"name":"CK","type":"related"},{"name":"CK-BB","type":"related"},{"name":"CK-MB","type":"related"},{"name":"CK-MM","type":"related"},{"name":"CKMiMi","type":"related"},{"name":"MB-CK","type":"related"},{"name":"MM-CK","type":"related"},{"name":"Mi-CK","type":"related"},{"name":"MiMi-CK","type":"related"},{"name":"adenosine triphosphate-creatine transphosphorylase activity","type":"related"},{"name":"creatine phosphokinase activity","type":"related"},{"name":"creatine phosphotransferase activity","type":"related"},{"name":"phosphocreatine kinase activity","type":"related"}],"termid":"GO:0004111"}


id: GO:0034929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxypyrene + O2 + 2 H+ + 2 e- = 1-hydroxypyrene-7,8-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxypyrene 7,8-monooxygenase activity (obsolete GO:0034929)","termid":"GO:0034929"}


id: GO:1990356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of a SUMO (small ubiquitin-related modifier) protein bound to a SUMO-conjugating E2 ligase. Sumoylation of the E2 ligase is an intermediate step required for the formation of covalent bonds between a SUMO protein and its ultimate protein target. SUMO is transferred to the E2 ligase by a SUMO-activating E1 enzyme. Sumoylation of the target protein is either facilitated directly by the sumoylated E2 ligase or aided by an optional E3 ligase.","definition_xrefs":["GOC:bhm","PMID:18691969"],"gene_count":0,"genotype_count":0,"name":"obsolete sumoylated E2 ligase complex (obsolete GO:1990356)","termid":"GO:1990356"}


id: PBO:0088488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1","termid":"PBO:0088488"}


id: PBO:0109401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 28, pseudogene","termid":"PBO:0109401"}


id: GO:0090687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of a meiosis I cell cycle spindle assembly checkpoint.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiosis I spindle assembly checkpoint","termid":"GO:1905326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"activation of meiosis I spindle assembly checkpoint","termid":"GO:0090687"}


id: GO:0141023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts host cell adhesion ito its extracellular matrix. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cell-cell adhesion","synonyms":[{"name":"disruption by symbiont of host cell-cell adhesion","type":"exact"}],"termid":"GO:0141023"}


id: GO:0061510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained to the new mitotic spindle pole body resulting in its being distributed asymmetrically.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric protein localization to old or new spindle pole body","termid":"GO:0061492"},{"relation_name":"is_a","term_name":"protein localization to mitotic spindle pole body","termid":"GO:1902440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"asymmetric protein localization to new mitotic spindle pole body","termid":"GO:0061510"}


id: MONDO:1010022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, non-human animal","secondary_identifiers":["OMIA:001041"],"termid":"MONDO:1010022","xrefs":{"Monarch":{"xref_id":"1010022"}}}


id: PBO:0017837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted GTPAse with a role in RNA polymerase localization (predicted)","termid":"PBO:0017837"}


id: PBO:0031389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_methionine","termid":"PBO:0031389"}


id: MONDO:0017320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phosphoenolpyruvate carboxykinase (PEPCK) deficiency is a gluconeogenesis disorder that results from impairment in the enzyme PEPCK, and comprising cytosolic (PEPCK1) and mitochondrial (PEPCK2) forms of enzyme deficiency. Onset of symptoms is neonatal or a few months after birth and includes hypoglycemia associated with acute episodes of severe lactic acidosis, progressive neurological deterioration, severe liver failure, renal tubular acidosis and Fanconi syndrome. Patients also present progressive multisystem damage with failure to thrive, muscular weakness and hypotonia, developmental delay with seizures, spasticity, lethargy, microcephaly and cardiomyopathy. To date, there is no conclusive evidence of the existence of an isolated form of this disorder.","definition_xrefs":["Orphanet:2880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of gluconeogenesis","termid":"MONDO:0019225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase deficiency","secondary_identifiers":["icd11.foundation:1350463176","UMLS:C0268194","GARD:16613","NANDO:2200536","SCTID:5335002","ICD9:277.89","MEDGEN:120618","MESH:C536654","NCIT:C99015"],"synonyms":[{"name":"PEPCK deficiency","type":"exact"},{"name":"phosphoenolpyruvate carboxykinase (GTP) deficiency","type":"exact"}],"termid":"MONDO:0017320","xrefs":{"Monarch":{"xref_id":"0017320"}}}


id: PBO:0036344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase Ura2","termid":"PBO:0036344"}


id: GO:1904117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vasopressin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22811487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to vasopressin","termid":"GO:1904116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vasopressin","termid":"GO:1904117"}


id: GO:0110152
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92026],"is_not":false,"summary":null,"term":"GO:0110152"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-end NAD+-phospho-ribonucleoside in mRNA + H2O = a 5'-end phospho-ribonucleoside in mRNA + H+ + NAD+.","definition_xrefs":["GOC:sp","PMID:28283058","RHEA:60880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"RNA NAD+-cap (NAD+-forming) hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA NAD-cap (NAD-forming) hydrolase activity","type":"exact"}],"termid":"GO:0110152","terms_by_termid":{"GO:0110152":null}}


id: GO:1903911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor clustering.","definition_xrefs":["GOC:als","GO_REF:0000058","PMID:23575248","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor clustering","synonyms":[{"name":"activation of receptor clustering","type":"narrow"},{"name":"up regulation of receptor clustering","type":"exact"},{"name":"up-regulation of receptor clustering","type":"exact"},{"name":"upregulation of receptor clustering","type":"exact"}],"termid":"GO:1903911"}


id: PBO:0079536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uveal autoantigen with coiled-coil domains and ankyrin repeats","termid":"PBO:0079536"}


id: PBO:0076090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIP1 homology and U-box containing protein 1","termid":"PBO:0076090"}


id: PBO:0076047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 1 pseudogene 2","termid":"PBO:0076047"}


id: MONDO:0011273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A systemic inherited histiocytosis, with characteristic cutaneous findings accompanying systemic manifestations. H syndrome refers to the major clinical findings of hyperpigmentation, hypertrichosis, hepatosplenomegaly, heart anomalies, hearing loss, hypogonadism, low height, and occasionally, hyperglycemia/diabetes mellitus. Due to overlapping clinical features, H syndrome is now considered to include pigmented hypertrichosis with insulin dependent diabetes mellitus syndrome (PHID), Faisalabad histiocytosis (FHC) and familial sinus histiocytosis with massive lymphadenopathy (FSHML).","definition_xrefs":["Orphanet:168569"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"},{"relation_name":"is_a","term_name":"sinus histiocytosis with massive lymphadenopathy","termid":"MONDO:0006412"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"H syndrome","secondary_identifiers":["MESH:C538322","UMLS:C1864445","icd11.foundation:107155297","MEDGEN:400532","MESH:C535391","GARD:10239","NANDO:2200457","DOID:0111278","OMIM:602782","SCTID:711159002"],"synonyms":[{"name":"Asrar Facharzt Haque syndrome","type":"exact"},{"name":"Faisalabad histiocytosis","type":"related"},{"name":"H syndrome","type":"exact"},{"name":"HJCD","type":"related"},{"name":"Rosai-Dorfman disease, familial","type":"related"},{"name":"SLC29A3 spectrum disorder","type":"related"},{"name":"histiocytosis and lymphadenopathy with or without cutaneous, Cardiac, and/or endocrine features, Joint contractures, and/or deafness","type":"related"},{"name":"histiocytosis with Joint contractures and sensorineural deafness","type":"related"},{"name":"histiocytosis-lymphadenopathy plus syndrome","type":"related"},{"name":"hyperpigmentation, cutaneous, with hypertrichosis, hepatosplenomegaly, heart anomalies, and hypogonadism with or without hearing loss","type":"related"},{"name":"pigmented hypertrichosis with insulin-dependent diabetes mellitus","type":"related"},{"name":"sinus histiocytosis and massive lymphadenopathy","type":"related"}],"termid":"MONDO:0011273","xrefs":{"Monarch":{"xref_id":"0011273"}}}


id: MOD:01063
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a monomethylated phenylalanine.","definition_xrefs":["DeltaMass:198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated phenylalanine","termid":"MOD:00717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated phenylalanine","synonyms":[{"name":"NMePhe","type":"exact"}],"termid":"MOD:01063"}


id: PATO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being on the same side in relation to another structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ipsilateral to","synonyms":[{"name":"ipsilateral","type":"exact"}],"termid":"PATO:0002035"}


id: PBO:0031337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_arsenic","termid":"PBO:0031337"}


id: MONDO:0013134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any open-angle glaucoma in which the cause of the disease is a mutation in the NTF4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"open-angle glaucoma","termid":"MONDO:0005338"},{"relation_name":"is_a","term_name":"hereditary glaucoma","termid":"MONDO:0018174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 1, open angle, O","secondary_identifiers":["MEDGEN:416515","MESH:C567753","OMIM:613100","UMLS:C2751294"],"synonyms":[{"name":"GLC1O","type":"related"},{"name":"NTF4 open-angle glaucoma","type":"exact"},{"name":"glaucoma 1, open angle, 1O","type":"exact"},{"name":"glaucoma 1, open angle, O","type":"exact"},{"name":"glaucoma 1, open angle, type O","type":"exact"},{"name":"open-angle glaucoma caused by mutation in NTF4","type":"exact"}],"termid":"MONDO:0013134","xrefs":{"Monarch":{"xref_id":"0013134"}}}


id: GO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron that is part of the brainstem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noradrenergic neuron fate commitment","termid":"GO:0003359"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation involved in brainstem development","termid":"GO:0003361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron fate commitment involved in brainstem development","termid":"GO:0003362"}


id: PBO:0015704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 subfamily, Sds21","termid":"PBO:0015704"}


id: GO:0008691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoyl-CoA + NADP+ = 3-acetoacetyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.1.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN","RHEA:16197"],"synonyms":[{"name":"(S)-3-hydroxybutanoyl-CoA:NADP+ oxidoreductase activity","type":"related"},{"name":"BHBD activity","type":"related"},{"name":"L(+)-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"},{"name":"L-(+)-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"},{"name":"beta-hydroxybutyryl coenzyme A dehydrogenase activity","type":"related"},{"name":"beta-hydroxybutyryl-CoA dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-3-hydroxybutyryl coenzyme A (nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0008691"}


id: PBO:0065398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 3","termid":"PBO:0065398"}


id: MONDO:0800458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heart disease that is present at birth. Representative examples include atrial, ventricular, and atrioventricular septal defects, double-outlet right ventricle, tetralogy of Fallot, hypoplastic left heart syndrome, aortic stenosis, and coarctation of the aorta.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0019042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NR2F2 related multiple congenital anomalies/dysmorphic syndrome","synonyms":[{"name":"ARP1-related multiple congenital anomalies/dysmorphic syndrome","type":"exact"},{"name":"COUPTFII-related multiple congenital anomalies/dysmorphic syndrome","type":"exact"},{"name":"NR2F2 related multiple congenital anomalies/dysmorphic syndrome","type":"exact"},{"name":"TCOUP2-related multiple congenital anomalies/dysmorphic syndrome","type":"exact"}],"termid":"MONDO:0800458","xrefs":{"Monarch":{"xref_id":"0800458"}}}


id: PBO:0016891
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longer transcript expressed during cold shock due to altered 3'-end processing","termid":"PBO:0016891"}


id: GO:0031931
data:
  {"annotated_genes":["SJAG_01509","SJAG_02723","SJAG_00167","SJAG_01320","SJAG_01703"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68754,78740,79257,106972,113353],"is_not":false,"summary":null,"term":"GO:0031931"}]},"cv_name":"cellular_component","definition":"A protein complex that contains at least TOR (target of rapamycin) and Raptor (regulatory-associated protein of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of S6K. In Saccharomyces, the complex contains Kog1p, Lst8p, Tco89p, and either Tor1p or Tor2p.","definition_xrefs":["PMID:21548787","PMID:15780592","PMID:16469695","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR complex","termid":"GO:0038201"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00167":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TORC1 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:MTORC1"],"synonyms":[{"name":"TOR complex 1","type":"exact"},{"name":"TORC 1 complex","type":"exact"},{"name":"TORC1","type":"exact"},{"name":"dTOR/dRaptor complex","type":"narrow"},{"name":"dTORC1","type":"narrow"},{"name":"mTORC1","type":"narrow"},{"name":"nutrient sensitive complex","type":"exact"},{"name":"rapamycin and nutrient-sensitive TOR complex","type":"exact"}],"termid":"GO:0031931","terms_by_termid":{"GO:0031931":null}}


id: MOD:01951
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamine residue and an L-serine residue by an ester bond and releasing ammonia to form O-(L-isoglutamyl)-L-serine.","definition_xrefs":["PubMed:17051152","RESID:AA0597#QSX"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-serine","termid":"MOD:01977"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-serine (Gln-Ser)","synonyms":[{"name":"(2S)-2-amino-5-[(2S)-2-amino-2-carboxyethoxy]-5-oxopentanoic acid","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)serine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-serine","type":"exact"},{"name":"O3-(isoglutamyl)-serine","type":"exact"}],"termid":"MOD:01951"}


id: PBO:0074437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 38","termid":"PBO:0074437"}


id: SO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A PRE is a (yeast) TFBS with consensus site [TGAAAC(A/G)].","definition_xrefs":["PMID:1489142","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"},{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone_response_element","synonyms":[{"name":"PRE","type":"exact"},{"name":"pheromone response element","type":"exact"}],"termid":"SO:0002045"}


id: MOD:01265
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:270#P","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site P","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01265"}


id: MONDO:0011613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the PINK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive early-onset Parkinson disease 6","secondary_identifiers":["MESH:C565276","GARD:18605","MEDGEN:342982","DOID:0060369","UMLS:C1853833","OMIM:605909"],"synonyms":[{"name":"PARK6","type":"related"},{"name":"PINK1 Parkinson disease","type":"exact"},{"name":"Parkinson disease 6, autosomal recessive early-onset","type":"related"},{"name":"Parkinson disease 6, early onset","type":"related"},{"name":"Parkinson disease 6, early-onset","type":"related"},{"name":"Parkinson disease 6, late-onset, susceptibility to","type":"related"},{"name":"Parkinson disease caused by mutation in PINK1","type":"exact"},{"name":"Parkinson disease, autosomal recessive early-onset, digenic, Pink1/Dj1","type":"related"},{"name":"autosomal recessive early-onset Parkinson disease 6","type":"exact"},{"name":"autosomal recessive early-onset Parkinson disease type 6","type":"related"},{"name":"autosomal recessive early-onset Parkinson's disease 6","type":"related"},{"name":"early-onset Parkinson disease 6","type":"related"}],"termid":"MONDO:0011613","xrefs":{"Monarch":{"xref_id":"0011613"}}}


id: MONDO:0008126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oncogene Yuasa (obsolete MONDO:0008126)","secondary_identifiers":["OMIM:164891"],"synonyms":[{"name":"oncogene Yuasa","type":"exact"}],"termid":"MONDO:0008126","xrefs":{"Monarch":{"xref_id":"0008126"}}}


id: PBO:0004110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1682 family protein","termid":"PBO:0004110"}


id: PBO:0075170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide E","termid":"PBO:0075170"}


id: PBO:0083225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with the uncharacterized ORF YGR068C","termid":"PBO:0083225"}


id: GO:0034945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA + CoASH = 3-isopropylbut-3-enoyl-CoA + propanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0987"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA C-acetyltransferase activity (obsolete GO:0034945)","termid":"GO:0034945"}


id: MONDO:0016602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Citrin deficiency is a rare autosomal recessive urea cycle defect characterized clinically by recurring episodes of hyperammonemia and associated neuropsychiatric symptoms in the adult-onset form (citrullinemia type II), and by transient cholestasis and variable hepatic dysfunction in the neonatal form (neonatal intrahepatic cholestasis due to citrin deficiency).","definition_xrefs":["Orphanet:247582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrullinemia","termid":"MONDO:0015991"},{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"citrin deficiency","secondary_identifiers":["icd11.foundation:348535193","MEDGEN:372684","NANDO:1200978","NANDO:2200483","GARD:20661","SCTID:429735007","UMLS:C1997910"],"synonyms":[{"name":"citrin deficiency","type":"exact"}],"termid":"MONDO:0016602","xrefs":{"Monarch":{"xref_id":"0016602"}}}


id: GO:1990427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at either end of a stereocilia tip link that provides the anchor in the stereocilia membrane.","definition_xrefs":["PMID:21709241","PMID:19447093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilia tip link","termid":"GO:0002140"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia tip-link density","termid":"GO:1990427"}


id: PBO:0030908
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_vegetative_growth","termid":"PBO:0030908"}


id: MONDO:0006197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary carcinoma of the endometrium that is similar to the small cell carcinoma of the lung, histologically.","definition_xrefs":["NCIT:C40155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"endometrial carcinoma","termid":"MONDO:0002447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial small cell carcinoma","secondary_identifiers":["DOID:7139","UMLS:C1516858","icd11.foundation:845680139","MEDGEN:309057","EFO:1000239"],"synonyms":[{"name":"endometrial small cell carcinoma","type":"exact"},{"name":"endometrium small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of endometrium","type":"exact"}],"termid":"MONDO:0006197","xrefs":{"Monarch":{"xref_id":"0006197"}}}


id: PBO:0068445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 19, pseudogene","termid":"PBO:0068445"}


id: PBO:0005888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Aspartic acid, mitochondrial","termid":"PBO:0005888"}


id: PBO:0041055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 6","termid":"PBO:0041055"}


id: MONDO:1012486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal intradural arachnoid cyst, non-human animal","termid":"MONDO:1011892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal intradural arachnoid cyst, dog","secondary_identifiers":["OMIA:001923-9615"],"termid":"MONDO:1012486","xrefs":{"Monarch":{"xref_id":"1012486"}}}


id: PBO:0031354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nystatin","termid":"PBO:0031354"}


id: FYPO:0002857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutathione synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutathione synthase activity","termid":"FYPO:0002856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished glutathione synthase activity","synonyms":[{"name":"abolished GSH synthase activity","type":"exact"},{"name":"abolished glutathione synthetase activity","type":"exact"},{"name":"glutathione synthase activity abolished","type":"exact"}],"termid":"FYPO:0002857"}


id: PBO:0038649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase like","termid":"PBO:0038649"}


id: GO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of galactose that leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by galactose","termid":"GO:0000409"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"carbon catabolite repression of transcription by galactose","synonyms":[{"name":"down regulation of transcription by galactose","type":"exact"},{"name":"down-regulation of transcription by galactose","type":"exact"},{"name":"downregulation of transcription by galactose","type":"exact"},{"name":"inhibition of transcription by galactose","type":"narrow"}],"termid":"GO:0000410"}


id: PBO:0036040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_SRP-dependent_cotranslational_protein_targeting_to_membrane_during_vegetative_growth","termid":"PBO:0036040"}


id: PBO:0061148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide adenylyltransferase 1","termid":"PBO:0061148"}


id: GO:0071748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["PMID:16362985","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgA immunoglobulin complex, circulating","termid":"GO:0071746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"monomeric IgA immunoglobulin complex","synonyms":[{"name":"monomeric IgA antibody","type":"exact"},{"name":"monomeric IgA1 antibody","type":"narrow"},{"name":"monomeric IgA2 antibody","type":"narrow"}],"termid":"GO:0071748"}


id: PR:Q9UTD1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yth1 gene.","definition_xrefs":["UniProtKB:Q9UTD1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA 3'-end-processing protein yth1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.08c","synonyms":[{"name":"Spom972h-yth1","type":"exact"}],"termid":"PR:Q9UTD1"}


id: PBO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 35, NatC auxiliary subunit","termid":"PBO:0060410"}


id: MONDO:0021486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the ciliary body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary body neoplasm","termid":"MONDO:0021229"},{"relation_name":"is_a","term_name":"benign neoplasm of iris","termid":"MONDO:0021485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of ciliary body","secondary_identifiers":["SCTID:92060009","NCIT:C4779","UMLS:C0496894","icd11.foundation:1138156221","ICD9:224.0","MEDGEN:96927"],"synonyms":[{"name":"benign ciliary body neoplasm","type":"exact"},{"name":"benign ciliary body tumor","type":"exact"},{"name":"benign ciliary body tumour","type":"exact"},{"name":"benign neoplasm of the ciliary body","type":"exact"},{"name":"benign tumor of ciliary body","type":"exact"},{"name":"benign tumor of the ciliary body","type":"exact"},{"name":"benign tumour of ciliary body","type":"exact"},{"name":"benign tumour of the ciliary body","type":"exact"},{"name":"ciliary body benign neoplasm","type":"exact"}],"termid":"MONDO:0021486","xrefs":{"Monarch":{"xref_id":"0021486"}}}


id: GO:0016847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) = 1-aminocyclopropane-1-carboxylate + S-methyl-5'-thioadenosine + H+.","definition_xrefs":["EC:4.4.1.14","RHEA:21744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase activity","secondary_identifiers":["GO:0034100","MetaCyc:4.4.1.14-RXN","KEGG_REACTION:R00179"],"synonyms":[{"name":"1-aminocyclopropane-1-carboxylate synthetase activity","type":"related"},{"name":"1-aminocyclopropane-1-carboxylic acid synthase activity","type":"related"},{"name":"1-aminocyclopropanecarboxylate synthase activity","type":"related"},{"name":"ACC synthase activity","type":"related"},{"name":"L-VG deaminase activity","type":"related"},{"name":"L-vinylglycine deaminase activity","type":"related"},{"name":"S-adenosyl-L-methionine methylthioadenosine-lyase (1-aminocyclopropane-1-carboxylate-forming)","type":"related"},{"name":"S-adenosyl-L-methionine methylthioadenosine-lyase activity","type":"related"},{"name":"aminocyclopropanecarboxylate synthase activity","type":"related"},{"name":"aminocyclopropanecarboxylic acid synthase activity","type":"related"}],"termid":"GO:0016847"}


id: PATO:0002150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the part of the body from which the tail arises.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed caudal","synonyms":[{"name":"splayed inferior (human torso)","type":"exact"},{"name":"splayed posterior","type":"exact"}],"termid":"PATO:0002150"}


id: MONDO:0032702
data:
  {"annotated_genes":["SJAG_02447","SJAG_02589"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86432,86433],"is_not":false,"summary":null,"term":"MONDO:0032702"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the SMARCC2 gene.","definition_xrefs":["MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02447":null,"SJAG_02589":null},"genotype_count":0,"is_obsolete":false,"name":"Coffin-Siris syndrome 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112367","MEDGEN:1679527","OMIM:618362","UMLS:C5193054","GARD:16347"],"synonyms":[{"name":"COFFIN-SIRIS SYNDROME 8","type":"related"},{"name":"CSS8","type":"related"},{"name":"SMARCC2-related BAFopathy","type":"exact"}],"termid":"MONDO:0032702","terms_by_termid":{"MONDO:0032702":null},"xrefs":{"Monarch":{"xref_id":"0032702"}}}


id: PBO:0090250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set5","termid":"PBO:0090250"}


id: PBO:0054064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1411","termid":"PBO:0054064"}


id: PBO:0054923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2337","termid":"PBO:0054923"}


id: PBO:0045851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 41","termid":"PBO:0045851"}


id: PBO:0070448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 5","termid":"PBO:0070448"}


id: PBO:0003032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine transporter (predicted)","termid":"PBO:0003032"}


id: PBO:0087364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific exo-1,3-beta-glucanase; contributes to ascospore thermoresistance; SPR1 has a paralog, EXG1, that arose from the whole genome duplication","termid":"PBO:0087364"}


id: MONDO:0016464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type B insulin-resistance syndrome belongs to the group of extreme insulin-resistance syndromes (which includes leprechaunism, the lipodystrophies, Rabson-Mendenhall syndrome, and type A insulin resistance syndrome) and occurs in the context of immune dysfunction.","definition_xrefs":["Orphanet:2298"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"insulin-resistance syndrome type B","secondary_identifiers":["UMLS:C0342337","MEDGEN:574967","icd11.foundation:408487090","GARD:3009"],"synonyms":[{"name":"insulin-resistance type B","type":"related"}],"termid":"MONDO:0016464","xrefs":{"Monarch":{"xref_id":"0016464"}}}


id: FYPO:0005617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during cellular response to bleomycin","termid":"FYPO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to bleomycin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to bleomycin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to bleomycin","type":"exact"}],"termid":"FYPO:0005617"}


id: PBO:0082337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding protein that is a subunit of the HOPS and CORVET complexes; essential for protein sorting, vesicle docking, and fusion at the vacuole; binds to SNARE domains","termid":"PBO:0082337"}


id: MOD:01216
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to O5-(carboxamidomethyl)glutamate.","definition_xrefs":["OMSSA:30","PubMed:11510821","PubMed:12422359","Unimod:4#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized glutamic acid","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"carbamidomethyle","type":"exact"}],"termid":"MOD:01216"}


id: PBO:0014275
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homopentameric","termid":"PBO:0014275"}


id: PBO:0055035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2450","termid":"PBO:0055035"}


id: PBO:0046615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group PABLB member 1, envelope","termid":"PBO:0046615"}


id: MONDO:0007951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"masticatory muscles, hypertrophy of","secondary_identifiers":["MESH:C563600","UMLS:C1835093","OMIM:154850","MEDGEN:322570","SCTID:699649006"],"synonyms":[{"name":"masseter muscle Hypertrophy","type":"related"},{"name":"masticatory muscles, hypertrophy of","type":"exact"}],"termid":"MONDO:0007951","xrefs":{"Monarch":{"xref_id":"0007951"}}}


id: MONDO:0032791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coffin-Siris syndrome 10","secondary_identifiers":["DOID:0112371","OMIM:618506","UMLS:C4760583","MEDGEN:1683634","GARD:16358"],"synonyms":[{"name":"COFFIN-SIRIS SYNDROME 10","type":"related"},{"name":"CSS10","type":"related"}],"termid":"MONDO:0032791","xrefs":{"Monarch":{"xref_id":"0032791"}}}


id: _global:transcribed_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is transcribed_from Y if X is synthesized from template Y.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_from","termid":"_global:transcribed_from"}


id: GO:0052902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + O2 + spermidine = 3-aminopropanal + H2O2 + putrescine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete spermidine:oxygen oxidoreductase (3-aminopropanal-forming) activity (obsolete GO:0052902)","termid":"GO:0052902"}


id: GO:1901896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an ATPase-coupled calcium transmembrane transporter activity.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:19708671","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"regulation of ATPase-coupled calcium transmembrane transporter activity","termid":"GO:1901894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of ATPase-coupled calcium transmembrane transporter activity","synonyms":[{"name":"activation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"activation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"activation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"activation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"activation of calcium ABC transporter","type":"narrow"},{"name":"activation of calcium efflux ATPase","type":"narrow"},{"name":"activation of calcium pump","type":"broad"},{"name":"activation of calcium transporting ATPase activity","type":"exact"},{"name":"activation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"activation of calcium-transporting ATPase activity","type":"narrow"},{"name":"activation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"activation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"activation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"positive regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"positive regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"positive regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"positive regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"positive regulation of calcium ABC transporter","type":"narrow"},{"name":"positive regulation of calcium efflux ATPase","type":"narrow"},{"name":"positive regulation of calcium pump","type":"broad"},{"name":"positive regulation of calcium transporting ATPase activity","type":"exact"},{"name":"positive regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"positive regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"positive regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"positive regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"positive regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"up regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"up regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"up regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"up regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"up regulation of calcium ABC transporter","type":"narrow"},{"name":"up regulation of calcium efflux ATPase","type":"narrow"},{"name":"up regulation of calcium pump","type":"broad"},{"name":"up regulation of calcium transporting ATPase activity","type":"exact"},{"name":"up regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"up regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"up regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"up regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"up regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"up-regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"up-regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"up-regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"up-regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"up-regulation of calcium ABC transporter","type":"narrow"},{"name":"up-regulation of calcium efflux ATPase","type":"narrow"},{"name":"up-regulation of calcium pump","type":"broad"},{"name":"up-regulation of calcium transporting ATPase activity","type":"exact"},{"name":"up-regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"up-regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"up-regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"up-regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"up-regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"upregulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"upregulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"upregulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"upregulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"upregulation of calcium ABC transporter","type":"narrow"},{"name":"upregulation of calcium efflux ATPase","type":"narrow"},{"name":"upregulation of calcium pump","type":"broad"},{"name":"upregulation of calcium transporting ATPase activity","type":"exact"},{"name":"upregulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"upregulation of calcium-transporting ATPase activity","type":"exact"},{"name":"upregulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"upregulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"upregulation of sarcoplasmic reticulum ATPase","type":"narrow"}],"termid":"GO:1901896"}


id: PR:Q10140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H8.04 gene.","definition_xrefs":["UniProtKB:Q10140","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.04","synonyms":[{"name":"Spom972h-SPAC3H8.04","type":"exact"}],"termid":"PR:Q10140"}


id: PBO:0028988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_small_RNA_level_(obsolete_FYPO:0003262)","termid":"PBO:0028988"}


id: PBO:0036480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly factor 4 Sdh8 (predicted)","termid":"PBO:0036480"}


id: GO:0051788
data:
  {"annotated_genes":["SJAG_03345","SJAG_00552","SJAG_02419","SJAG_02341","SJAG_00270","SJAG_01556","SJAG_04567","SJAG_01160","SJAG_03815","SJAG_00219","SJAG_03657","SJAG_00173","SJAG_04187","SJAG_04612","SJAG_00054","SJAG_05022","SJAG_01737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112620,110332,104523,110331,71214,88395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[110068,109963,108324,110661,113951],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[89582,113314,88112,103728],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[76875,111183],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a misfolded protein stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to topologically incorrect protein","termid":"GO:0035966"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00173":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00552":null,"SJAG_01160":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03815":null,"SJAG_04187":null,"SJAG_04567":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to misfolded protein","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051788","terms_by_termid":{"GO:0071218":null,"GO:0071629":null,"GO:0071630":null,"GO:0180027":null}}


id: MONDO:0017286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"TEMPI syndrome is a rare multi-systemic disease characterized by the presence of Telangiectasias, Erythrocytosis with elevated erythropoietin levels, Monoclonal gammopathy, Perinephric-fluid collections, and Intrapulmonary shunting.","definition_xrefs":["Orphanet:284227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"tempi syndrome","secondary_identifiers":["GARD:10962","UMLS:C3854394","MEDGEN:886502","NCIT:C121656","SCTID:718614004"],"synonyms":[{"name":"telangiectasia - erythrocytosis - monoclonal gammopathy - perinephric-fluid collections - intrapulmonary shunting","type":"related"},{"name":"telangiectasia-erythrocytosis-monoclonal gammopathy-perinephric-fluid collections-intrapulmonary shunting syndrome","type":"exact"}],"termid":"MONDO:0017286","xrefs":{"Monarch":{"xref_id":"0017286"}}}


id: GO:0090150
data:
  {"annotated_genes":["SJAG_02320","SJAG_00916","SJAG_01120","SJAG_00687","SJAG_00360","SJAG_01178","SJAG_04996","SJAG_03955","SJAG_02282","SJAG_05302","SJAG_03315","SJAG_01114","SJAG_03915","SJAG_04294","SJAG_03970","SJAG_01949","SJAG_01112","SJAG_01558","SJAG_01299","SJAG_03440","SJAG_02588","SJAG_01640","SJAG_03416","SJAG_01405","SJAG_01641","SJAG_00064","SJAG_01367","SJAG_01759","SJAG_00379","SJAG_03838","SJAG_02524","SJAG_02456","SJAG_01496","SJAG_02437","SJAG_04208","SJAG_02355","SJAG_00277","SJAG_01127","SJAG_04609","SJAG_02914","SJAG_03502","SJAG_04565","SJAG_02065","SJAG_01780","SJAG_01223","SJAG_01349","SJAG_02034","SJAG_01840","SJAG_03865","SJAG_03633","SJAG_01999","SJAG_00144","SJAG_00175","SJAG_04203","SJAG_00858","SJAG_04763","SJAG_00603","SJAG_01917","SJAG_04129","SJAG_03029","SJAG_01809","SJAG_02208","SJAG_02361","SJAG_03684","SJAG_00569","SJAG_01516","SJAG_01435","SJAG_01782","SJAG_01951","SJAG_00959","SJAG_05300","SJAG_02354","SJAG_04451","SJAG_03411","SJAG_01240","SJAG_00330","SJAG_02330","SJAG_03781","SJAG_01733","SJAG_04684","SJAG_03396","SJAG_02797","SJAG_01282","SJAG_00895","SJAG_02398","SJAG_03515","SJAG_00404","SJAG_03930","SJAG_05414","SJAG_01940"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98235,107620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006613"},{"annotations":[113117,101452,119217,95222,91615,113334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[96040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061951"},{"annotations":[101337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140569"},{"annotations":[75044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140570"},{"annotations":[77942,95473,113336,106740,70530,107367,109120,109904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[88409],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[79844,109660,96058,70257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[98372,108631,73500,97656,80601],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[111721,90752,95751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"},{"annotations":[98373,98915,98684,101514,103831,95158,105107,104801,108721,114168,71765,108632,114720,68248,91990,109661,110729,112584,106497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045048"},{"annotations":[75951,74326,73818,78201,113527,88978,107885,103243,107909,116596,90716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[78879,78620,58335,78830,74770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[98554,112122,110727,70303,59095,98904,76923,107886,110373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[60326,73308,75205,96221,71445,75349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006612"},{"annotations":[91328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[69273,66556,94603,73319,70256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[91953,114698,115462],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[98374,102903,108633,73515,75748,74010],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"},{"annotations":[73176,75381,114458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a membrane.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization","termid":"GO:0045184"},{"relation_name":"is_a","term_name":"protein localization to 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id: PBO:0041552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 18","termid":"PBO:0041552"}


id: MONDO:0001231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute orbital inflammation","termid":"MONDO:0001230"},{"relation_name":"is_a","term_name":"periostitis","termid":"MONDO:0004934"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orbital periostitis","secondary_identifiers":["DOID:11231","ICD9:376.02","SCTID:65974003","MEDGEN:509877","UMLS:C0155257"],"termid":"MONDO:0001231","xrefs":{"Monarch":{"xref_id":"0001231"}}}


id: PBO:0070602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 70","termid":"PBO:0070602"}


id: SO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is localized inside the cytoplasm.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramembrane_polypeptide_region","termid":"SO:0001072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cytoplasmic_polypeptide_region","secondary_identifiers":["BS:00145"],"synonyms":[{"name":"cytoplasm_location","type":"exact"},{"name":"cytoplasmic polypeptide region","type":"exact"},{"name":"inside","type":"related"}],"termid":"SO:0001073"}


id: MONDO:0021579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the femur.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of femur","secondary_identifiers":["ICD9:239.2","MEDGEN:8809","SCTID:126583006","UMLS:C0015807"],"synonyms":[{"name":"femur neoplasm","type":"exact"},{"name":"femur neoplasm (disease)","type":"exact"},{"name":"femur tumor","type":"exact"},{"name":"femur tumour","type":"exact"},{"name":"neoplasm of femur","type":"exact"},{"name":"tumor of femur","type":"exact"},{"name":"tumour of femur","type":"exact"}],"termid":"MONDO:0021579","xrefs":{"Monarch":{"xref_id":"0021579"}}}


id: MONDO:0019648
data:
  {"annotated_genes":["SJAG_04528","SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008701"},{"annotations":[85528,85527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010966"}]},"cv_name":"mondo","definition":"Achondrogenesis describes a rare group of lethal skeletal dysplasias characterized by an endochondral ossification deficiency that leads to dwarfism with extreme micromelia, a small thorax, a prominent abdomen, anasarca and polyhydramnios. There are three types of achondrogenesis that exist and that differ clinically, radiologically, histologically and genetically: achondrogensis type 1a, type 1b and type 2.","definition_xrefs":["Orphanet:932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null,"SJAG_04528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"achondrogenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0001079","MedDRA:10066122","ICD10CM:Q77.0","GARD:2882","DOID:0080043","NCIT:C84527","OMIMPS:200600","MESH:C579878","NORD:710","icd11.foundation:103965243","MEDGEN:84","SCTID:2391001"],"termid":"MONDO:0019648","terms_by_termid":{"MONDO:0008701":null,"MONDO:0010966":null},"xrefs":{"Monarch":{"xref_id":"0019648"}}}


id: GO:0009344
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses nitrite reductase [NAD(P)H] activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nitrite reductase complex [NAD(P)H]","termid":"GO:0009344"}


id: MONDO:0016401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete energy metabolism disorder with epilepsy (obsolete MONDO:0016401)","secondary_identifiers":["Orphanet:225696"],"termid":"MONDO:0016401","xrefs":{"Monarch":{"xref_id":"0016401"}}}


id: FYPO:0001499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cytochalasin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cytochalasin B","synonyms":[{"name":"resistance to cytochalasin B during mitotic cell cycle","type":"related"},{"name":"resistance to cytochalasin B during vegetative growth","type":"exact"},{"name":"resistant to cytochalasin B","type":"exact"}],"termid":"FYPO:0001499"}


id: GO:0006291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The excision of damaged DNA during pyrimidine-dimer repair. A large multienzyme complex scans the DNA for a distortion in the double helix rather than for a specific base change. Once a bulky lesion is found, the phosphodiester backbone of the abnormal strand is cleaved on both sides of the distortion, and the portion of the strand containing the lesion (an oligonucleotide) is peeled away from the DNA double helix by a DNA helicase enzyme.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine-dimer repair, DNA damage excision (obsolete GO:0006291)","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage excision","type":"exact"}],"termid":"GO:0006291"}


id: PBO:0058980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLIP antisense RNA 1","termid":"PBO:0058980"}


id: PBO:0042887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 300","termid":"PBO:0042887"}


id: MONDO:0100102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fetal akinesia deformation sequence in which the cause of the disease is a mutation in the RAPSN gene.","definition_xrefs":["OMIM:618388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal akinesia deformation sequence","termid":"MONDO:0008824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal akinesia deformation sequence 2","secondary_identifiers":["MEDGEN:1678048","DOID:0111378","UMLS:C4760576","GARD:16495"],"synonyms":[{"name":"FADS2","type":"exact"}],"termid":"MONDO:0100102","xrefs":{"Monarch":{"xref_id":"0100102"}}}


id: PBO:0064754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 90","termid":"PBO:0064754"}


id: FYPO:0008123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase, when cells the population are subject to phosphate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability in stationary phase","termid":"FYPO:0000245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"loss  of viability in stationary phase upon phosphate starvation","synonyms":[{"name":"decreased chronological lifespan of phosphate-starved cells","type":"exact"}],"termid":"FYPO:0008123"}


id: MONDO:0016091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Krabbe disease that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease","termid":"MONDO:0009499"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559","MONDO:0005066","MONDO:0002039","MONDO:0005244","MONDO:0002561","MONDO:0002525"],"is_obsolete":false,"name":"adult Krabbe disease","secondary_identifiers":["icd11.foundation:699668826","MEDGEN:120623","NANDO:1200077","NANDO:2201219","Orphanet:206448","UMLS:C0268252","GARD:20345"],"synonyms":[{"name":"Krabbe disease of adults","type":"exact"}],"termid":"MONDO:0016091","xrefs":{"Monarch":{"xref_id":"0016091"}}}


id: PBO:0081179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zymogen granule protein 16","termid":"PBO:0081179"}


id: PBO:0031387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_sulfite","termid":"PBO:0031387"}


id: PBO:0046061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J divergent transcript","termid":"PBO:0046061"}


id: PBO:0067111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 153, pseudogene","termid":"PBO:0067111"}


id: PBO:0004879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase complex subunit Eaf7","termid":"PBO:0004879"}


id: MONDO:0004116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the esophagus. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"esophageal neuroendocrine tumor","termid":"MONDO:0003649"},{"relation_name":"is_a","term_name":"carcinoma of esophagus","termid":"MONDO:0019086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophageal small cell neuroendocrine carcinoma","secondary_identifiers":["DOID:7134","MEDGEN:207270","UMLS:C1112474"],"synonyms":[{"name":"Oat cell carcinoma of esophagus","type":"exact"},{"name":"Oat cell carcinoma of oesophagus","type":"exact"},{"name":"Oat cell carcinoma of the esophagus","type":"exact"},{"name":"Oat cell carcinoma of the oesophagus","type":"exact"},{"name":"esophageal Oat cell carcinoma","type":"exact"},{"name":"esophageal small cell NEC","type":"exact"},{"name":"esophageal small cell carcinoma","type":"exact"},{"name":"esophageal small cell neuroendocrine carcinoma","type":"exact"},{"name":"esophagus Oat cell carcinoma","type":"exact"},{"name":"esophagus small cell carcinoma","type":"exact"},{"name":"oesophagus Oat cell carcinoma","type":"exact"},{"name":"oesophagus small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of esophagus","type":"exact"},{"name":"small cell carcinoma of oesophagus","type":"exact"},{"name":"small cell carcinoma of the esophagus","type":"exact"},{"name":"small cell carcinoma of the oesophagus","type":"exact"},{"name":"small cell carcinoma, esophagus","type":"exact"},{"name":"small cell carcinoma, oesophagus","type":"exact"}],"termid":"MONDO:0004116","xrefs":{"Monarch":{"xref_id":"0004116"}}}


id: GO:0030160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that provides a physical support bridging a synaptic signaling receptor and a downstream signaling molecule.","definition_xrefs":["PMID:10506216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor complex adaptor activity","termid":"GO:0030159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"synaptic receptor adaptor activity","synonyms":[{"name":"GKAP/Homer scaffold activity","type":"narrow"},{"name":"GKAP/Homer scaffold protein","type":"narrow"},{"name":"postsynaptic density scaffold protein","type":"narrow"}],"termid":"GO:0030160"}


id: FYPO:0005121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from early meiotic genes measured in a cell is lower than normal during the meiotic cell cycle. Early meiotic genes are normally transcribed during pre-meiotic S phase and recombination.","definition_xrefs":["PMID:17927811","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of early meiotic gene mRNA during meiotic cell cycle","synonyms":[{"name":"decreased level of early meiosis gene mRNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene RNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene transcripts during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005121"}


id: PBO:0116667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 5C","termid":"PBO:0116667"}


id: PBO:0074072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 47","termid":"PBO:0074072"}


id: GO:0046597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host inhibits or disrupts the entry of a symbiont into a host cell.","definition_xrefs":["PMID:23544079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated suppression of symbiont invasion","synonyms":[{"name":"blocking of symbiont entry into host cell","type":"exact"},{"name":"negative regulation of symbiont entry into host cell","type":"related"},{"name":"negative regulation of viral entry into host cell","type":"narrow"},{"name":"negative regulation of viral penetration into host cell","type":"exact"},{"name":"prevention of symbiont entry into host cell","type":"exact"}],"termid":"GO:0046597"}


id: PR:Q9USH1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13186:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.03c","secondary_identifiers":["UniProtKB:Q9USH1"],"synonyms":[{"name":"SPCP31B10.03c","type":"related"},{"name":"Spom972h-MED31","type":"exact"},{"name":"cell separation protein sep10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator complex subunit 31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sep10","type":"related"},{"name":"soh1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USH1"}


id: GO:1902624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil migration.","definition_xrefs":["GOC:TermGenie","PMID:1826836","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"positively_regulates","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil migration","synonyms":[{"name":"activation of neutrophil migration","type":"narrow"},{"name":"up regulation of neutrophil migration","type":"exact"},{"name":"up-regulation of neutrophil migration","type":"exact"},{"name":"upregulation of neutrophil migration","type":"exact"}],"termid":"GO:1902624"}


id: GO:0005798
data:
  {"annotated_genes":["SJAG_04391","SJAG_01508","SJAG_01025","SJAG_02240","SJAG_00669","SJAG_01927","SJAG_00092","SJAG_04569","SJAG_04070","SJAG_04474","SJAG_02160","SJAG_04402","SJAG_00916","SJAG_02234","SJAG_01809","SJAG_02482","SJAG_02012","SJAG_00192","SJAG_03368","SJAG_04517","SJAG_04609","SJAG_00379","SJAG_02282","SJAG_04002","SJAG_01285","SJAG_04565"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95352,115327],"is_not":false,"summary":null,"term":"GO:0005798"},{"annotations":[78094,113325,113113,62227],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[65651,58806],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[107443,71238,64393,93554,80220,73858,78374,78719,98772],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[114466,93467,91931,99841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030137"},{"annotations":[98084,96371],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030663"},{"annotations":[77627,72270],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034044"},{"annotations":[100514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030140"}]},"cv_name":"cellular_component","definition":"Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00192":null,"SJAG_00379":null,"SJAG_00669":null,"SJAG_00916":null,"SJAG_01025":null,"SJAG_01285":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_01927":null,"SJAG_02012":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_03368":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Golgi-associated vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao819927218"],"synonyms":[{"name":"Golgi vesicle","type":"related"},{"name":"vesicular component","type":"related"}],"termid":"GO:0005798","terms_by_termid":{"GO:0005798":null,"GO:0030121":null,"GO:0030126":null,"GO:0030130":null,"GO:0030137":null,"GO:0030140":null,"GO:0030663":null,"GO:0034044":null}}


id: MONDO:1010697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Citrullinemia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrullinemia, non-human animal","termid":"MONDO:1010095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrullinaemia, cattle","secondary_identifiers":["OMIA:000194-9913"],"termid":"MONDO:1010697","xrefs":{"Monarch":{"xref_id":"1010697"}}}


id: PBO:0030305
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_activation_of_monopolar_cell_growth","termid":"PBO:0030305"}


id: GO:0060185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The opening and spreading out of the outer ear.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"outer ear morphogenesis","termid":"GO:0042473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear unfolding","termid":"GO:0060185"}


id: PBO:0066023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP3 divergent transcript","termid":"PBO:0066023"}


id: PBO:0082596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class I histone deacetylase (HDAC) family member; deacetylates Smc3p on lysine residues at anaphase onset; has sequence similarity to Hda1p, Rpd3p, Hos2p, and Hos3p; interacts with the Tup1p-Ssn6p corepressor complex","termid":"PBO:0082596"}


id: GO:2000997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan metabolic process","termid":"GO:0032950"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellulose catabolic process","synonyms":[{"name":"regulation of cellulose breakdown","type":"exact"},{"name":"regulation of cellulose catabolism","type":"exact"},{"name":"regulation of cellulose degradation","type":"exact"}],"termid":"GO:2000997"}


id: PBO:0056706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotransferrin","termid":"PBO:0056706"}


id: FYPO:0002034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase type I activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal DNA topoisomerase type I activity","termid":"FYPO:0002034"}


id: GO:0032430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme phospholipase A2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipase activity","termid":"GO:0010518"},{"relation_name":"is_a","term_name":"regulation of phospholipase A2 activity","termid":"GO:0032429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipase A2 activity","synonyms":[{"name":"activation of phospholipase A2 activity","type":"narrow"},{"name":"stimulation of phospholipase A2 activity","type":"narrow"},{"name":"up regulation of phospholipase A2 activity","type":"exact"},{"name":"up-regulation of phospholipase A2 activity","type":"exact"},{"name":"upregulation of phospholipase A2 activity","type":"exact"}],"termid":"GO:0032430"}


id: PBO:0040583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRISC and BRCA1 A complex member 2","termid":"PBO:0040583"}


id: MONDO:0011866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the VRK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 1","termid":"MONDO:0016396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0037792","MONDO:0005066","MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 1A","secondary_identifiers":["OMIM:607596","MEDGEN:335969","UMLS:C1843504","DOID:0060265","GARD:15416"],"synonyms":[{"name":"PCH1A","type":"related"},{"name":"Pch1","type":"related"},{"name":"VRK1 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in VRK1","type":"exact"},{"name":"pontocerebellar hypoplasia with anterior horn cell disease","type":"related"},{"name":"pontocerebellar hypoplasia with infantile spinal muscular atrophy","type":"related"},{"name":"pontocerebellar hypoplasia, type 1A","type":"related"}],"termid":"MONDO:0011866","xrefs":{"Monarch":{"xref_id":"0011866"}}}


id: MONDO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory disease affecting the esophageal wall.","definition_xrefs":["NCIT:C9224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophagitis","secondary_identifiers":["ICD9:530.1","SCTID:16761005","HP:0100633","ICD9:530.10","DOID:11963","MEDGEN:4549","ICD9:530.12","MESH:D004941","UMLS:C0014868"],"synonyms":[{"name":"acute esophagitis","type":"narrow"},{"name":"esophagitis","type":"exact"},{"name":"esophagitis (disease)","type":"exact"},{"name":"esophagus inflammation","type":"exact"},{"name":"inflammation of esophagus","type":"exact"},{"name":"inflammation of oesophagus","type":"exact"},{"name":"oesophagus inflammation","type":"exact"}],"termid":"MONDO:0001409","xrefs":{"Monarch":{"xref_id":"0001409"}}}


id: MONDO:1011939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachygnathia superior and degenerative joint disease, non-human animal","secondary_identifiers":["OMIA:000150"],"termid":"MONDO:1011939","xrefs":{"Monarch":{"xref_id":"1011939"}}}


id: FYPO:0002986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased during a cellular response to ionizing radiation. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"increased chromatin binding during cellular response to ionizing radiation","synonyms":[{"name":"increased chromatin binding during cellular response to IR","type":"exact"}],"termid":"FYPO:0002986"}


id: GO:1903380
data:
  {"annotated_genes":["SJAG_03048","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102699,117006],"is_not":false,"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic chromosome condensation.","definition_xrefs":["GOC:TermGenie","PMID:9490640","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of mitotic chromosome condensation","termid":"GO:1903379"},{"relation_name":"is_a","term_name":"positive regulation of chromosome condensation","termid":"GO:1905821"},{"relation_name":"positively_regulates","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic chromosome condensation","type":"narrow"},{"name":"up regulation of mitotic chromosome condensation","type":"exact"},{"name":"up-regulation of mitotic chromosome condensation","type":"exact"},{"name":"upregulation of mitotic chromosome condensation","type":"exact"}],"termid":"GO:1903380","terms_by_termid":{"GO:1903380":null}}


id: MONDO:0019513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esophageal malformation (obsolete MONDO:0019513)","secondary_identifiers":["icd11.foundation:1999264345","Orphanet:88993"],"termid":"MONDO:0019513","xrefs":{"Monarch":{"xref_id":"0019513"}}}


id: PBO:0024851
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae STE6","termid":"PBO:0024851"}


id: PBO:0067809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 111","termid":"PBO:0067809"}


id: SO:0001514
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is not in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direct","termid":"SO:0001514"}


id: PBO:0069752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1035, pseudogene","termid":"PBO:0069752"}


id: GO:0014046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dopamine by a cell. Dopamine is a catecholamine and a precursor of adrenaline and noradrenaline. It acts as a neurotransmitter in the central nervous system but it is also produced peripherally and acts as a hormone.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine transport","termid":"GO:0015872"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"is_a","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"dopamine secretion","termid":"GO:0014046"}


id: PBO:0057638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1228","termid":"PBO:0057638"}


id: GO:0100039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates pyrimidine nucleotide biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pyrimidine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100039)","termid":"GO:0100039"}


id: GO:0010306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of rhamnogalacturonan II, a low molecular mass (5 - 10KDa) pectic polysaccharide, conserved in the primary walls of dicotyledenous and monocotyledenous plants and gymnosperms.","definition_xrefs":["PMID:12754267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan II metabolic process","termid":"GO:0010396"},{"relation_name":"is_a","term_name":"cell wall pectin biosynthetic process","termid":"GO:0052325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"rhamnogalacturonan II biosynthetic process","termid":"GO:0010306"}


id: SO:0001560
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the inactivation of a ligand binding site with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_loss_of_function_variant","termid":"SO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactive_ligand_binding_site","synonyms":[{"name":"inactive ligand binding site","type":"exact"}],"termid":"SO:0001560"}


id: PBO:0068908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 151, pseudogene","termid":"PBO:0068908"}


id: GO:0141005
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116867],"is_not":false,"summary":null,"term":"GO:0141005"}]},"cv_name":"biological_process","definition":"A transposable element silencing mechanism involving heterochromatin assembly. Heterochromatin is a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:28951459","PMID:32823517","PMID:25247314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposable element silencing","termid":"GO:0010526"},{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transposable element silencing by heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9842860"],"synonyms":[{"name":"retrotransposon silencing by heterochromatin formation","type":"narrow"}],"termid":"GO:0141005","terms_by_termid":{"GO:0141005":null}}


id: GO:0042948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of salicin (saligenin-beta-D-glucopyranoside), a glucoside of o-hydroxybenzylalcohol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucoside transport","termid":"GO:0015759"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"salicin transport","termid":"GO:0042948"}


id: PBO:0078218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 8-2 (pseudogene)","termid":"PBO:0078218"}


id: PBO:0017810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pig-U, Gab1 (predicted)","termid":"PBO:0017810"}


id: PBO:0054541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1941","termid":"PBO:0054541"}


id: GO:0043228
data:
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