# terms

id: MONDO:0007208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Boomerang dysplasia (BD) is a rare lethal skeletal dysplasia characterized by severe short-limbed dwarfism, dislocated joints, club feet, distinctive facies and diagnostic x-ray findings of underossified and dysplastic long tubular bones, with a boomerang-like bowing.","definition_xrefs":["Orphanet:1263"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Boomerang dysplasia","secondary_identifiers":["MESH:C536573","DOID:0050680","OMIM:112310","MEDGEN:96579","SCTID:254054000","ICD9:756.9","GARD:933","icd11.foundation:423736259","UMLS:C0432201"],"synonyms":[{"name":"Boomerang dysplasia","type":"exact"},{"name":"Boomerang-like skeletal dysplasia","type":"related"},{"name":"dwarfism with short, bowed, rigid limbs and characteristic facies","type":"related"}],"termid":"MONDO:0007208","xrefs":{"Monarch":{"xref_id":"0007208"}}}


id: MONDO:0020034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of respiratory tract neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare respiratory tract neoplasm (obsolete MONDO:0020034)","secondary_identifiers":["Orphanet:98060"],"synonyms":[{"name":"rare respiratory cancer","type":"narrow"},{"name":"rare respiratory neoplasm","type":"exact"},{"name":"rare respiratory tract neoplasm","type":"exact"},{"name":"rare respiratory tumor","type":"exact"}],"termid":"MONDO:0020034","xrefs":{"Monarch":{"xref_id":"0020034"}}}


id: PBO:0049285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 4","termid":"PBO:0049285"}


id: GO:0007065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a male.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"male meiosis sister chromatid cohesion","termid":"GO:0007065"}


id: PR:Q92357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfr1 gene.","definition_xrefs":["UniProtKB:Q92357","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fusion protein cfr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.12","synonyms":[{"name":"CHS5-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfr1","type":"exact"}],"termid":"PR:Q92357"}


id: MONDO:0032691
data:
  {"annotated_genes":["SJAG_04848"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86403],"is_not":false,"summary":null,"term":"MONDO:0032691"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1674560","GARD:16343","OMIM:618347","UMLS:C5193043"],"synonyms":[{"name":"GALLOWAY-MOWAT SYNDROME 6","type":"related"},{"name":"GAMOS6","type":"related"}],"termid":"MONDO:0032691","terms_by_termid":{"MONDO:0032691":null},"xrefs":{"Monarch":{"xref_id":"0032691"}}}


id: GO:0050259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NADP+ + ribofuranose = D-ribonate + 2 H+ + NADPH.","definition_xrefs":["EC:1.1.1.115","RHEA:11676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R01079","MetaCyc:RIBOSE-1-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"D-ribose dehydrogenase (NADP+)","type":"related"},{"name":"D-ribose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-pentose-dehydrogenase activity","type":"related"}],"termid":"GO:0050259"}


id: MONDO:0018539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of small intestine (obsolete MONDO:0018539)","secondary_identifiers":["Orphanet:425368"],"synonyms":[{"name":"rare epithelial tumor of small bowel","type":"exact"}],"termid":"MONDO:0018539","xrefs":{"Monarch":{"xref_id":"0018539"}}}


id: GO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by a carbon dioxide stimulus is received and converted to a molecular signal by the vasomotor center of the central nervous system.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbon dioxide","termid":"GO:0003031"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by ischemic conditions","termid":"GO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of carbon dioxide by vasomotor center","termid":"GO:0002013"}


id: PBO:0041084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRMS1 like transcriptional repressor","termid":"PBO:0041084"}


id: PBO:0074757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 116","termid":"PBO:0074757"}


id: GO:1901411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process from glutamate.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glutamate","termid":"GO:1901410"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"is_a","term_name":"negative regulation of glutamate metabolic process","termid":"GO:2000212"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole biosynthetic process from glutamate","termid":"GO:0033526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0033013","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"down regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthetic process from glutamate","type":"narrow"},{"name":"inhibition of tetrapyrrole formation from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:1901411"}


id: MONDO:0012808
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86516],"is_not":false,"summary":null,"term":"MONDO:0012808"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the ACTN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1AA","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15543","DOID:0110428","UMLS:C2677338","MEDGEN:393713","OMIM:612158","MESH:C567407"],"synonyms":[{"name":"ACTN2 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"CMD1AA","type":"exact"},{"name":"cardiomyopathy, dilated, 1AA, with or without LVNC","type":"exact"},{"name":"cardiomyopathy, dilated, 1AA, with or without left ventricular noncompaction","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, 23, with or without ventricular noncompaction","type":"related"},{"name":"cardiomyopathy, hypertrophic, 23, with or without LVNC","type":"exact"},{"name":"dilated cardiomyopathy 1AA with or without left ventricular noncompaction","type":"exact"},{"name":"dilated cardiomyopathy type 1AA","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in ACTN2","type":"exact"}],"termid":"MONDO:0012808","terms_by_termid":{"MONDO:0012808":null},"xrefs":{"Monarch":{"xref_id":"0012808"}}}


id: PBO:0075862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 1","termid":"PBO:0075862"}


id: PBO:0075019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-30","termid":"PBO:0075019"}


id: MONDO:0008626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureter, bifid or double","secondary_identifiers":["MEDGEN:348142","UMLS:C1860586","OMIM:191550","MESH:C566012"],"synonyms":[{"name":"ureter, bifid or double","type":"exact"}],"termid":"MONDO:0008626","xrefs":{"Monarch":{"xref_id":"0008626"}}}


id: PBO:0053218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 16","termid":"PBO:0053218"}


id: PBO:0030346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation,_with_unseparated_DNA","termid":"PBO:0030346"}


id: MONDO:0002808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, non-metastasizing cystic epithelial neoplasm arising from the exocrine pancreas. It is composed of glycogen-rich epithelial cells which produce a watery fluid. Signs and symptoms include abdominal mass, abdominal pain, nausea, vomiting, and weight loss.","definition_xrefs":["NCIT:C5712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic cystadenoma","termid":"MONDO:0002809"},{"relation_name":"is_a","term_name":"serous cystadenoma","termid":"MONDO:0005177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic serous cystadenoma","secondary_identifiers":["MEDGEN:233833","UMLS:C1335316","DOID:3917","ONCOTREE:PSC"],"synonyms":[{"name":"PSC","type":"related"},{"name":"pancreas serous cystadenoma","type":"exact"},{"name":"pancreatic microcystic adenoma","type":"exact"},{"name":"pancreatic serous cystadenoma","type":"exact"},{"name":"serous cystadenoma of pancreas","type":"exact"},{"name":"serous cystadenoma of the pancreas","type":"exact"}],"termid":"MONDO:0002808","xrefs":{"Monarch":{"xref_id":"0002808"}}}


id: MONDO:0014690
data:
  {"annotated_genes":["SJAG_01378"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85433],"is_not":false,"summary":null,"term":"MONDO:0014690"}]},"cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal dominant mutation of ACD on chromosome 16q22.1.","definition_xrefs":["DOID:0070023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"},{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"},{"relation_name":"is_a","term_name":"ACD-related short telomere syndrome","termid":"MONDO:0100569"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01378":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005570","MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal dominant 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C176924","UMLS:C4225284","GARD:16136","OMIM:616553","MEDGEN:904824"],"synonyms":[{"name":"DKCA6","type":"exact"},{"name":"autosomal dominant dyskeratosis congenita 6","type":"related"},{"name":"dyskeratosis congenita, autosomal dominant 6","type":"exact"},{"name":"dyskeratosis congenita, autosomal dominant type 6","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive 7","type":"related"}],"termid":"MONDO:0014690","terms_by_termid":{"MONDO:0014690":null},"xrefs":{"Monarch":{"xref_id":"0014690"}}}


id: MONDO:0012939
data:
  {"annotated_genes":["SJAG_02046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87097],"is_not":false,"summary":null,"term":"MONDO:0012939"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPS7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612563","UMLS:C2675511","DOID:0111881","GARD:15570","MEDGEN:390817","MESH:C567253","NCIT:C176917"],"synonyms":[{"name":"DBA8","type":"related"},{"name":"Diamond-Blackfan Anaemia type 8","type":"exact"},{"name":"Diamond-Blackfan Anemia type 8","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPS7","type":"exact"},{"name":"Diamond-Blackfan anemia 8","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPS7","type":"exact"},{"name":"RPS7 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPS7 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0012939","terms_by_termid":{"MONDO:0012939":null},"xrefs":{"Monarch":{"xref_id":"0012939"}}}


id: PBO:0051829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 4","termid":"PBO:0051829"}


id: PBO:0117077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PES1 antisense RNA 1","termid":"PBO:0117077"}


id: PBO:0025459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial superoxide dismutase Sod2","termid":"PBO:0025459"}


id: GO:0140995
data:
  {"annotated_genes":["SJAG_00364","SJAG_03720","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106949,116566],"is_not":false,"summary":null,"term":"GO:0140995"},{"annotations":[114831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072371"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group to a histone H2A.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone kinase activity","termid":"GO:0035173"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01082":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0140096","GO:0004672","GO:0003674"],"is_obsolete":false,"name":"histone H2A kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140995","terms_by_termid":{"GO:0072371":null,"GO:0140995":null}}


id: GO:1990066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which excess light energy absorbed by chlorophyll and not used to drive photosynthesis is emitted by nonphotochemical quenching or chlorophyll fluorescence.","definition_xrefs":["PMID:10938857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"energy quenching","termid":"GO:1990066"}


id: GO:0070518
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD53, a member of the tetraspan family.","definition_xrefs":["PMID:8757325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD53 complex","synonyms":[{"name":"ITGA4-ITGB1-CD53 complex","type":"narrow"}],"termid":"GO:0070518"}


id: GO:0018165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uridylylation of peptidyl-tyrosine to form peptidyl-O4'-(phospho-5'-uridine)-L-tyrosine, found in glutamine synthetase.","definition_xrefs":["RESID:AA0256"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine uridylylation (obsolete GO:0018165)","termid":"GO:0018165"}


id: PBO:0078989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon TTA) 2-1","termid":"PBO:0078989"}


id: PBO:0059095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 1","termid":"PBO:0059095"}


id: GO:0120045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a stereocilium in a stable functional or structural state.","definition_xrefs":["GOC:krc","PMID:27693694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stereocilium maintenance","termid":"GO:0120045"}


id: PBO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha mannosidase Mnl1 (predicted)","termid":"PBO:0002360"}


id: MONDO:0002702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the ovary and is characterized by the presence of cystic structures. It includes the serous cystadenocarcinoma, mucinous cystadenocarcinoma, and clear cell cystadenocarcinoma.","definition_xrefs":["NCIT:C5228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian cystadenocarcinoma","secondary_identifiers":["UMLS:C1096638","EFO:1001962","DOID:3605","MEDGEN:242756","SCTID:314191009"],"synonyms":[{"name":"cystadenocarcinoma of ovary","type":"exact"},{"name":"cystadenocarcinoma of the ovary","type":"exact"},{"name":"ovarian cystadenocarcinoma","type":"exact"},{"name":"ovary cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0002702","xrefs":{"Monarch":{"xref_id":"0002702"}}}


id: GO:0102172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NADH + O2 + H+ = 4alpha-formyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NAD + 2 H2O.","definition_xrefs":["GOC:pz","RHEA:58860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol-4alpha-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11925"],"termid":"GO:0102172"}


id: MONDO:1010259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephritis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephritis, non-human animal","secondary_identifiers":["OMIA:000708"],"termid":"MONDO:1010259","xrefs":{"Monarch":{"xref_id":"1010259"}}}


id: GO:0019763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the Fc region of an immunoglobulin protein and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0198547684","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"immunoglobulin receptor activity","secondary_identifiers":["GO:0016489"],"synonyms":[{"name":"FC receptor activity","type":"exact"}],"termid":"GO:0019763"}


id: PR:O60165
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.01c","synonyms":[{"name":"Spom972h-spn7","type":"exact"}],"termid":"PR:O60165"}


id: PBO:0054851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2265","termid":"PBO:0054851"}


id: PBO:0058397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4769","termid":"PBO:0058397"}


id: PBO:0044930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase iota","termid":"PBO:0044930"}


id: GO:0015710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tellurite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tellurite transport","termid":"GO:0015710"}


id: GO:0140903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 26) = S-adenosyl-L-homocysteine + (histone H3)-N-methyl-arginine (position 26). This reaction is the addition of a methyl group to the arginine residue at position 26 of histone H3.","definition_xrefs":["PMID:17882261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016741","GO:0003824","GO:0008276","GO:0016740"],"is_obsolete":false,"name":"histone H3R26 methyltransferase activity","synonyms":[{"name":"histone H3R26 arginine methyltransferase activity","type":"exact"},{"name":"histone methylase activity (H3-R26 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-R26 specific)","type":"exact"},{"name":"histone-H3R26 methyltransferase activity","type":"exact"},{"name":"histone-arginine N-methyltransferase activity (H3-R26 specific)","type":"exact"}],"termid":"GO:0140903"}


id: GO:0042150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of DNA recombination occurring within a plasmid or between plasmids and other plasmids or DNA molecules.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"plasmid recombination","termid":"GO:0042150"}


id: GO:0042801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the addition of a phosphate group onto a serine or threonine residue in any member of the polo kinase class of proteins.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete polo kinase kinase activity (obsolete GO:0042801)","termid":"GO:0042801"}


id: MONDO:0011213
data:
  {"annotated_genes":["SJAG_01926"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85868],"is_not":false,"summary":null,"term":"MONDO:0011213"}]},"cv_name":"mondo","definition":"Pierpont syndrome is a rare subcutaneous tissue disorder characterized by axial hypotonia after birth, prolonged feeding difficulties, moderate to severe global developmental delay, seizures (in particular absence seizures), fetal digital pads, distinctive plantar fat pads anteromedial to the heels, deep palmar and plantar grooves. Additionally, distinct craniofacial dysmorphic features, notably a broad face with high forehead, high anterior hairline, narrow palpebral fissures that take on a crescent moon shape when smiling, broad nasal bridge and tip with anteverted nostrils, mild midfacial hypoplasia, long, smooth philtrum, thin upper lip vermillion, small, widely spaced teeth and flat occiput/microcephaly/brachycephaly, are also chararteristic. Over time, fat pads may become less prominent and disappear.","definition_xrefs":["Orphanet:487825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Pierpont syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17885","UMLS:C1865644","DOID:0081362","MESH:C566559","MEDGEN:356049","OMIM:602342"],"synonyms":[{"name":"PIERPONT syndrome","type":"related"},{"name":"PRPTS","type":"related"},{"name":"Pierpont syndrome","type":"exact"},{"name":"plantar lipomatosis, unusual facies, and developmental delay","type":"related"},{"name":"plantar lipomatosis-facial dysmorphism-developmental delay syndrome","type":"exact"},{"name":"plantar lipomatosis-unusual facies-developmental delay syndrome","type":"exact"}],"termid":"MONDO:0011213","terms_by_termid":{"MONDO:0011213":null},"xrefs":{"Monarch":{"xref_id":"0011213"}}}


id: GO:0072369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lipid transport by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0072369)","synonyms":[{"name":"regulation of lipid transport by positive regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072369"}


id: GO:0043296
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in some invertebrates, such as Drosophila, is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability.","definition_xrefs":["PMID:12525486","PMID:15196556","GOC:kmv","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical junction complex","synonyms":[{"name":"apical cell junction complex","type":"exact"},{"name":"apical junction","type":"exact"}],"termid":"GO:0043296"}


id: PBO:0028743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0028743"}


id: PBO:0080597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 27","termid":"PBO:0080597"}


id: PBO:0047610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin homology 2 domain containing 1","termid":"PBO:0047610"}


id: GO:0180020
data:
  {"annotated_genes":["SJAG_02177","SJAG_03795","SJAG_01848","SJAG_04644","SJAG_05289","SJAG_03010","SJAG_01460"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103780,108889,108967,115216,116521,118832,118921],"is_not":false,"summary":null,"term":"GO:0180020"}]},"cv_name":"molecular_function","definition":"The activity of bending or deforming a membrane. This activity can occur by multiple mechanisms including the insertion amphipathic domains into one or both leaflets.","definition_xrefs":["PMID:19780639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01460":null,"SJAG_01848":null,"SJAG_02177":null,"SJAG_03010":null,"SJAG_03795":null,"SJAG_04644":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane bending activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane curving","type":"related"}],"termid":"GO:0180020","terms_by_termid":{"GO:0180020":null}}


id: GO:0006217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxycytidine, 2-deoxyribosylcytosine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxycytidine metabolic process","termid":"GO:0046092"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside catabolic process","termid":"GO:0046127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxycytidine catabolic process","synonyms":[{"name":"deoxycytidine breakdown","type":"exact"},{"name":"deoxycytidine catabolism","type":"exact"},{"name":"deoxycytidine degradation","type":"exact"}],"termid":"GO:0006217"}


id: SO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxymethylaminomethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxymethylaminomethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:078"],"synonyms":[{"name":"5-carboxymethylaminomethyl- 2'-O-methyluridine","type":"exact"},{"name":"cmnm5Um","type":"exact"},{"name":"five carboxymethylaminomethyl two prime O methyluridine","type":"exact"}],"termid":"SO:0001370"}


id: FYPO:0002326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a sterol measured in a cell is lower than normal. A sterol is any natural product derived from the steroid skeleton and containing a hydroxy group in the 3 position, closely related to cholestan-3-ol.","definition_xrefs":["CHEBI:15889","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular sterol level","termid":"FYPO:0002325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular sterol level","synonyms":[{"name":"decreased cellular sterol level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sterol level during vegetative growth","type":"exact"},{"name":"decreased sterol level","type":"exact"},{"name":"reduced cellular sterol level","type":"exact"}],"termid":"FYPO:0002326"}


id: GO:0021763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the subthalamic nucleus over time from its initial formation until its mature state. The subthalamic nucleus is the lens-shaped nucleus located in the ventral part of the subthalamus on the inner aspect of the internal capsule that is concerned with the integration of somatic motor function.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","ISBN:0878937420","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"subthalamus development","termid":"GO:0021539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subthalamic nucleus development","synonyms":[{"name":"corpus luysi development","type":"related"}],"termid":"GO:0021763"}


id: MONDO:0003962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Froelich syndrome is characterized by obesity and hypogonadism due to a hypothalamic-pituitary disorder. The hypothalamus is a part of the brain where certain functions such as sleep cycles and body temperature are regulated. The pituitary is a gland that makes hormones that affect growth and the functions of other glands in the body. Froehlich syndrome is acquired(i.e., not thought to be inherited or genetic). This syndrome appears to affect males more commonly. The term 'Froelich syndrome' is rarely used today.","direct_ancestors":[{"relation_name":"is_a","term_name":"hypothalamic disorder","termid":"MONDO:0002150"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Froelich syndrome","secondary_identifiers":["SCTID:62999006","ICD9:253.8","MEDGEN:4795","NCIT:C34625","DOID:6676","UMLS:C0016724"],"synonyms":[{"name":"Adiposodysgenesis","type":"related"},{"name":"Babinski-Froelich syndrome","type":"exact"},{"name":"Froehlich syndrome","type":"exact"},{"name":"Froehlich's syndrome","type":"exact"},{"name":"Froelich's adiposity","type":"related"},{"name":"Froelich's syndrome","type":"exact"},{"name":"Frohlich syndrome","type":"exact"},{"name":"Frohlich's syndrome","type":"exact"},{"name":"Frolich's syndrome","type":"exact"},{"name":"Fröhlich syndrome","type":"exact"},{"name":"Launois-Cleret syndrome","type":"exact"},{"name":"adiposogenital dystrophy","type":"related"},{"name":"adiposogenital syndrome","type":"exact"},{"name":"dystrophia Adiposogenitalis","type":"exact"},{"name":"hypothalamic infantilism-obesity","type":"exact"},{"name":"sexual infantilism","type":"exact"}],"termid":"MONDO:0003962","xrefs":{"Monarch":{"xref_id":"0003962"}}}


id: MONDO:0017882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Omsk hemorrhagic fever (OHF), caused by Omsk hemorrhagic fever virus (OHFV), is a zoonotic disease characterized by fever, nausea, myalgia and moderately severe hemorrhagic manifestations as well as in some cases meningitis, pneumonia and nephrosis.","definition_xrefs":["Orphanet:319266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Omsk hemorrhagic fever","secondary_identifiers":["ICD10CM:A98.1","ICD9:065.1","MESH:D006481","icd11.foundation:946068954","MEDGEN:9212","MedDRA:10030310","SCTID:48113006","DOID:992","GARD:8254","UMLS:C0019103"],"termid":"MONDO:0017882","xrefs":{"Monarch":{"xref_id":"0017882"}}}


id: PBO:0069059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 306, pseudogene","termid":"PBO:0069059"}


id: MONDO:0011141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megaloblastic anemia-immunodeficiency due to folate transporter 1 deficiency","termid":"MONDO:0971066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"megaloblastic anemia, folate-responsive","secondary_identifiers":["UMLS:C2749656","MEDGEN:440842","OMIM:601775"],"synonyms":[{"name":"MEGAF","type":"exact"},{"name":"folate level in erythrocytes","type":"exact"}],"termid":"MONDO:0011141","xrefs":{"Monarch":{"xref_id":"0011141"}}}


id: PBO:0083953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-tubulin; involved in nucleating microtubules from both the cytoplasmic and nuclear faces of the spindle pole body; protein abundance increases in response to DNA replication stress; null mutation is complemented by human TUBG1","termid":"PBO:0083953"}


id: PBO:0035813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-eMTOC_absent_from_cell","termid":"PBO:0035813"}


id: GO:1905668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to endosome.","definition_xrefs":["GO_REF:0000058","PMID:22732145","GOC:TermGenie","GOC:bc","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to endosome","termid":"GO:1905666"},{"relation_name":"positively_regulates","term_name":"protein localization to endosome","termid":"GO:0036010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to endosome","synonyms":[{"name":"activation of protein localisation in endosome","type":"narrow"},{"name":"activation of protein localization in endosome","type":"narrow"},{"name":"activation of protein localization to endosome","type":"narrow"},{"name":"positive regulation of protein localisation in endosome","type":"exact"},{"name":"positive regulation of protein localization in endosome","type":"exact"},{"name":"up regulation of protein localisation in endosome","type":"exact"},{"name":"up regulation of protein localization in endosome","type":"exact"},{"name":"up regulation of protein localization to endosome","type":"exact"},{"name":"up-regulation of protein localisation in endosome","type":"exact"},{"name":"up-regulation of protein localization in endosome","type":"exact"},{"name":"up-regulation of protein localization to endosome","type":"exact"},{"name":"upregulation of protein localisation in endosome","type":"exact"},{"name":"upregulation of protein localization in endosome","type":"exact"},{"name":"upregulation of protein localization to endosome","type":"exact"}],"termid":"GO:1905668"}


id: GO:0051861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic group such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate.","definition_xrefs":["PMID:19635802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"glycolipid binding","termid":"GO:0051861"}


id: GO:0043465
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fermentation, the anaerobic enzymatic conversion of organic compounds, especially carbohydrates, to other compounds, especially to ethyl alcohol, resulting in energy in the form of adenosine triphosphate (ATP).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of fermentation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043465","terms_by_termid":{"GO:2001172":null}}


id: MONDO:0003940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that presents as vertebral osteonecrosis typically affecting a thoracic vertebra with compression deformity, intravertebral vacuum cleft, and exaggerated kyphosis weeks to months after a minor traumatic injury.","definition_xrefs":["PMID:23814399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloarthropathy","termid":"MONDO:0005095"},{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"},{"relation_name":"is_a","term_name":"vertebral disorder","termid":"MONDO:0045002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Kummell disease","secondary_identifiers":["DOID:6603","UMLS:C0152088","ICD10CM:M48.3","ICD9:721.7","MEDGEN:508880","SCTID:111232005"],"synonyms":[{"name":"Kummell disease","type":"exact"},{"name":"Kummell's disease","type":"exact"},{"name":"Kummell's spondylitis","type":"exact"},{"name":"avascular necrosis of a vertebral body","type":"exact"},{"name":"bony vertebral centrum osteonecrosis","type":"exact"},{"name":"osteonecrosis of bony vertebral centrum","type":"exact"},{"name":"traumatic spondylopathy","type":"exact"}],"termid":"MONDO:0003940","xrefs":{"Monarch":{"xref_id":"0003940"}}}


id: GO:0008418
data:
  {"annotated_genes":["SJAG_00476","SJAG_00450"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67781,79247],"is_not":false,"summary":null,"term":"GO:0008418"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-terminal L-asparaginyl-[protein] + H+ + H2O = N-terminal L-aspartyl-[protein] + NH4+. This reaction is the deamidation of an N-terminal asparagine residue in a peptide or protein.","definition_xrefs":["PMID:8910481","RHEA:50676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00450":null,"SJAG_00476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"protein-N-terminal asparagine amidohydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:3.5.1.121"],"termid":"GO:0008418","terms_by_termid":{"GO:0008418":null}}


id: PBO:0048713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 3 pseudogene 2","termid":"PBO:0048713"}


id: SO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000064 gene_by_transcript_attribute (obsolete SO:0000064)","termid":"SO:0000064"}


id: FYPO:0007476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of an otherwise normal occurrence of cell cycle arrest in mitotic G1 phase is shorter than normal.","definition_xrefs":["PMID:32361273","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"decreased duration of cell cycle arrest in G1 phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic cell cycle arrest in G1 phase","type":"exact"}],"termid":"FYPO:0007476"}


id: SO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature between stages of processing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate","termid":"SO:0000933"}


id: PBO:0011086
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae THI80","termid":"PBO:0011086"}


id: PBO:0061311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPHP3-ACAD11 readthrough (NMD candidate)","termid":"PBO:0061311"}


id: FYPO:0003382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular acetate level","synonyms":[{"name":"increased acetate accumulation","type":"related"},{"name":"increased cellular acetate level during mitotic cell cycle","type":"related"},{"name":"increased cellular acetate level during vegetative growth","type":"exact"}],"termid":"FYPO:0003382"}


id: PBO:0117432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 23","termid":"PBO:0117432"}


id: PBO:0049516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AC histone family pseudogene 1","termid":"PBO:0049516"}


id: GO:0018845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxychromene-2-carboxylate = (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate. (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate is also known as trans-o-hydroxybenzylidenepyruvate.","definition_xrefs":["RHEA:27401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxychromene-2-carboxylate isomerase activity","secondary_identifiers":["UM-BBD_reactionID:r0337","KEGG_REACTION:R05137","EC:5.99.1.4","MetaCyc:RXNN-386"],"termid":"GO:0018845"}


id: MONDO:0044751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of diarrheal disease.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease","termid":"MONDO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic diarrheal disease","secondary_identifiers":["UMLS:C0401151","SCTID:236071009","MEDGEN:96036"],"synonyms":[{"name":"chronic diarrhea","type":"exact"},{"name":"chronic diarrhoea","type":"exact"},{"name":"diarrheal disease, chronic","type":"exact"}],"termid":"MONDO:0044751","xrefs":{"Monarch":{"xref_id":"0044751"}}}


id: PATO:0001786
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being divided or broken up into parts or divisions.","definition_xrefs":["die.net:die.net"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split","synonyms":[{"name":"clefted","type":"exact"},{"name":"divided","type":"related"},{"name":"forked","type":"related"},{"name":"septate","type":"narrow"}],"termid":"PATO:0001786"}


id: GO:0046936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyadenosine + H+ + H2O = 2'-deoxyinosine + NH4+.","definition_xrefs":["GOC:ai","RHEA:28190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2'-deoxyadenosine deaminase activity","secondary_identifiers":["MetaCyc:ADDALT-RXN"],"synonyms":[{"name":"deoxyadenosine deaminase reaction","type":"exact"}],"termid":"GO:0046936"}


id: PBO:0109362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 1B","termid":"PBO:0109362"}


id: PBO:0079463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-golgi network vesicle protein 23 homolog C","termid":"PBO:0079463"}


id: MONDO:0003617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic inflammation of the fallopian tube. It usually follows an acute inflammatory attack.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingitis","termid":"MONDO:0003619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic salpingitis","secondary_identifiers":["icd11.foundation:1932766800","UMLS:C0269041","ICD10CM:N70.11","SCTID:55551005","DOID:5731","MEDGEN:82839","NCIT:C40118"],"synonyms":[{"name":"salpingitis, chronic","type":"exact"}],"termid":"MONDO:0003617","xrefs":{"Monarch":{"xref_id":"0003617"}}}


id: PBO:0091251
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae RAD5","termid":"PBO:0091251"}


id: FYPO:0003574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003574"}


id: PBO:0074335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1","termid":"PBO:0074335"}


id: MONDO:0009882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma clot retraction factor, deficiency of","secondary_identifiers":["UMLS:C1849778","MEDGEN:376656","OMIM:262800","MESH:C564885"],"synonyms":[{"name":"plasma clot retraction factor, deficiency of","type":"exact"}],"termid":"MONDO:0009882","xrefs":{"Monarch":{"xref_id":"0009882"}}}


id: GO:0071883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an adrenergic receptor binding to its physiological ligand and leading to the activation of a MAP kinase cascade.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"MAPK-activating adrenergic receptor signaling pathway","synonyms":[{"name":"activation of MAP kinase activity by adrenergic receptor signaling pathway","type":"exact"},{"name":"activation of MAP kinase activity by adrenergic receptor signalling pathway","type":"exact"},{"name":"activation of MAPK activity by adrenergic receptor signaling pathway","type":"exact"},{"name":"activation of MAPK activity by adrenergic receptor signalling pathway","type":"exact"}],"termid":"GO:0071883"}


id: MONDO:0003737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Leydig cell tumor characterized by a large size, cellular atypia, high mitotic activity, vascular invasion and necrotic changes. The prognosis is usually poor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant Leydig cell tumor","termid":"MONDO:0000377"},{"relation_name":"is_a","term_name":"testicular Leydig cell tumor","termid":"MONDO:0003124"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant testicular Leydig cell tumor","secondary_identifiers":["DOID:6021","NCIT:C39942","UMLS:C1515288","MEDGEN:271769"],"synonyms":[{"name":"testicular Leydig cell tumor, malignant","type":"exact"}],"termid":"MONDO:0003737","xrefs":{"Monarch":{"xref_id":"0003737"}}}


id: PBO:0039861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 25","termid":"PBO:0039861"}


id: FYPO:0005599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the first meiotic nuclear division is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of meiosis I","synonyms":[{"name":"delayed meiosis I progression","type":"related"},{"name":"increased duration of first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiosis I progression","type":"exact"},{"name":"prolonged meiosis I","type":"exact"}],"termid":"FYPO:0005599"}


id: GO:0120197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The respiratory system process driven by motile cilia on epithelial cells of the respiratory tract by which mucus and associated inhaled particles and pathogens trapped within it are moved out of the airways.","definition_xrefs":["GOC:krc","PMID:24119105","PMID:27864314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system process","termid":"GO:0003016"},{"relation_name":"is_a","term_name":"epithelial cilium movement involved in extracellular fluid movement","termid":"GO:0003351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mucociliary clearance","synonyms":[{"name":"MCC","type":"related"},{"name":"MCT","type":"related"},{"name":"mucociliary transport","type":"exact"}],"termid":"GO:0120197"}


id: GO:1903391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adherens junction organization.","definition_xrefs":["GOC:als","PMID:21724833","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"adherens junction organization","termid":"GO:0034332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adherens junction organization","synonyms":[{"name":"regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"regulation of adherens junction organisation","type":"exact"}],"termid":"GO:1903391"}


id: GO:1901734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of quercetin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00724","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"quercetin metabolic process","termid":"GO:1901732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin biosynthetic process","synonyms":[{"name":"quercetin anabolism","type":"exact"},{"name":"quercetin biosynthesis","type":"exact"},{"name":"quercetin formation","type":"exact"},{"name":"quercetin synthesis","type":"exact"}],"termid":"GO:1901734"}


id: PBO:0081273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 37B, pseudogene","termid":"PBO:0081273"}


id: PBO:0082149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-protein thioesterase responsible for depalmitoylation of Gpa1p; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and nucleus and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0082149"}


id: GO:0075009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of slender tubular outgrowth first produced by most symbiont spores immediately following germination on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ tube formation","synonyms":[{"name":"germ tube formation on or near host","type":"exact"}],"termid":"GO:0075009"}


id: PBO:0028319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_fission","termid":"PBO:0028319"}


id: GO:0019729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP583 chromophore cross-link from the alpha-carboxyl carbon of residue n, a glutamine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["RESID:AA0189"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-glutaminyl-5-imidazolinone glycine (obsolete GO:0019729)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-glutaminyl-5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-glutaminyl-5-imidazolinone glycine","type":"exact"}],"termid":"GO:0019729"}


id: PBO:0046020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 1","termid":"PBO:0046020"}


id: GO:0015135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucuronate from one side of a membrane to the other. Glucuronate is the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glucuronate transmembrane transporter activity","termid":"GO:0015135"}


id: PBO:0012267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex striatin subunit, Far8/Csc3","termid":"PBO:0012267"}


id: PBO:0017578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein Eos1 (predicted)","termid":"PBO:0017578"}


id: PBO:0063423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4B antisense RNA 1","termid":"PBO:0063423"}


id: GO:0070208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein heterotrimer, a macromolecular structure consisting of three noncovalently associated subunits, of which not all are identical.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein heterooligomerization","termid":"GO:0051291"},{"relation_name":"is_a","term_name":"protein trimerization","termid":"GO:0070206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"protein heterotrimerization","synonyms":[{"name":"protein heterotrimer assembly","type":"exact"},{"name":"protein heterotrimer biosynthesis","type":"exact"},{"name":"protein heterotrimer biosynthetic process","type":"exact"},{"name":"protein heterotrimer formation","type":"exact"}],"termid":"GO:0070208"}


id: PBO:0058570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511a-2","termid":"PBO:0058570"}


id: PR:000050401
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-78, MOD:00047.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:23333317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein cut12 phosphorylated 3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"Spom-cut12/Phos:3","type":"exact"},{"name":"UniProtKB:O59755, Thr-78, MOD:00047","type":"narrow"}],"termid":"PR:000050401"}


id: PBO:0077334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 71","termid":"PBO:0077334"}


id: FYPO:0001701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bortezomib. Cells stop growing (and may die) at a concentration of bortezomib that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to bortezomib","synonyms":[{"name":"hypersensitive to bortezomib","type":"exact"},{"name":"sensitive to Velcade","type":"exact"},{"name":"sensitive to bortezomib during mitotic cell cycle","type":"related"},{"name":"sensitive to bortezomib during vegetative growth","type":"exact"}],"termid":"FYPO:0001701"}


id: MONDO:1011891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral compressive myelopathy, non-human animal","secondary_identifiers":["OMIA:001894"],"termid":"MONDO:1011891","xrefs":{"Monarch":{"xref_id":"1011891"}}}


id: PBO:0079222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 1","termid":"PBO:0079222"}


id: FYPO:0006110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the silent mating-type cassettes are present at greater levels than normal.","definition_xrefs":["PMID:28404620","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased siRNA level","termid":"FYPO:0004207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased silent mating-type cassette transcript-derived siRNA level","synonyms":[{"name":"increased accumulation of siRNAs homologous to silent mating-type cassette","type":"related"},{"name":"increased accumulation of silent mating-type cassette transcript-derived siRNA","type":"exact"},{"name":"increased level of silent mating-type cassette transcript-derived siRNA","type":"exact"},{"name":"increased mating-type region heterochromatin transcript-derived siRNA level","type":"exact"},{"name":"increased silent mating-type cassette transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"increased silent mating-type cassette transcript-derived siRNA level during vegetative growth","type":"exact"},{"name":"increased silent mating-type region transcript-derived siRNA level","type":"exact"}],"termid":"FYPO:0006110"}


id: GO:0022605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process that is a step in the formation and maturation of an ovum or female gamete from a primordial female germ cell.","definition_xrefs":["GOC:mtg_sensu","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammalian oogenesis stage","synonyms":[{"name":"mammalian oogenesis process","type":"exact"}],"termid":"GO:0022605"}


id: MONDO:0004889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"partial central choroid dystrophy","termid":"MONDO:0004890"},{"relation_name":"is_a","term_name":"central areolar choroidal dystrophy","termid":"MONDO:0008982"},{"relation_name":"is_a","term_name":"choroideremia","termid":"MONDO:0010557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"total central choroidal atrophy","secondary_identifiers":["DOID:9820","SCTID:392049002","ICD9:363.54","UMLS:C0154898","MEDGEN:509706"],"synonyms":[{"name":"central gyrate choroidal dystrophy","type":"related"},{"name":"choroidal dystrophy, serpiginous","type":"exact"},{"name":"helicoid choroid dystrophy","type":"related"},{"name":"total central choroid atrophy","type":"related"},{"name":"total central choroidal atrophy","type":"exact"},{"name":"total central dystrophy of choroid","type":"related"}],"termid":"MONDO:0004889","xrefs":{"Monarch":{"xref_id":"0004889"}}}


id: GO:1900515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xylose catabolic process to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"is_a","term_name":"regulation of D-xylose catabolic process","termid":"GO:0043469"},{"relation_name":"regulates","term_name":"D-xylose catabolic process to ethanol","termid":"GO:0044577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"regulation of xylose catabolic process to ethanol","synonyms":[{"name":"regulation of xylose catabolism to ethanol","type":"exact"}],"termid":"GO:1900515"}


id: GO:0045312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"nor-spermidine metabolic process","termid":"GO:0046204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nor-spermidine biosynthetic process","synonyms":[{"name":"nor-spermidine anabolism","type":"exact"},{"name":"nor-spermidine biosynthesis","type":"exact"},{"name":"nor-spermidine formation","type":"exact"},{"name":"nor-spermidine synthesis","type":"exact"}],"termid":"GO:0045312"}


id: GO:1990125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homotetrameric protein complex consisting of a symmetrical pair of DiaA homodimers. Facilitates DnaA binding to the origin of replication during replication initiation.","definition_xrefs":["PMID:17699754","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DiaA complex","synonyms":[{"name":"DiaA homotetramer","type":"exact"}],"termid":"GO:1990125"}


id: GO:0042324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an orexin receptor.","definition_xrefs":["PMID:11988773","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"orexin receptor binding","synonyms":[{"name":"hypocretin receptor binding","type":"exact"},{"name":"hypocretin receptor ligand","type":"narrow"},{"name":"orexin receptor ligand","type":"narrow"}],"termid":"GO:0042324"}


id: PBO:0000358
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.2.3","termid":"PBO:0000358"}


id: GO:0060573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of the identity of a cell in a field of cells that is being instructed as to how to differentiate. Once specification has taken place, that cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate specification involved in pattern specification","termid":"GO:0060573"}


id: PBO:0051447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 4-3","termid":"PBO:0051447"}


id: _global:located_in
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"a relation between two independent continuants, the target and the location, in which the target is entirely within the location","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"located_in","secondary_identifiers":["RO:0001025"],"termid":"_global:located_in"}


id: MONDO:0005296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by multiple cessations of respirations during sleep that induce partial arousals and interfere with the maintenance of sleep.","definition_xrefs":["MESH:D012891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sleep apnea syndrome","secondary_identifiers":["ICD10CM:G47.3","MEDGEN:11458","SCTID:73430006","NCIT:C148023","EFO:0003877","HP:0010535","DOID:0050847","SCTID:111489007","ICD9:780.57","UMLS:C0037315"],"synonyms":[{"name":"SDB","type":"exact"},{"name":"apnea syndrome, sleep","type":"related"},{"name":"apnea syndromes, sleep","type":"related"},{"name":"apnea, sleep","type":"related"},{"name":"apneas, sleep","type":"related"},{"name":"breathing, sleep-disordered","type":"related"},{"name":"breathing-related sleep disorder","type":"broad"},{"name":"hypersomnia with periodic respiration","type":"related"},{"name":"hypopnea, sleep","type":"related"},{"name":"hypopneas, sleep","type":"related"},{"name":"mixed central and obstructive sleep apnea","type":"related"},{"name":"mixed sleep Apneas","type":"related"},{"name":"mixed sleep apnea","type":"related"},{"name":"sleep apnea","type":"exact"},{"name":"sleep apnea syndrome","type":"exact"},{"name":"sleep apnea, mixed","type":"related"},{"name":"sleep apnea, mixed central and obstructive","type":"related"},{"name":"sleep apneas","type":"exact"},{"name":"sleep apneas, mixed","type":"related"},{"name":"sleep disordered breathing","type":"exact"},{"name":"sleep hypopnea","type":"related"},{"name":"sleep hypopneas","type":"related"},{"name":"sleep-disordered breathing","type":"exact"}],"termid":"MONDO:0005296","xrefs":{"Monarch":{"xref_id":"0005296"}}}


id: PR:O13977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- jmj1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.02","synonyms":[{"name":"Spom972h-jmj1","type":"exact"},{"name":"jumonji domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13977"}


id: FYPO:0008285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate (5-IP7) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular myo-inositol level","termid":"FYPO:0008284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular 5-IP7 level","termid":"FYPO:0008285"}


id: GO:0031279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclase activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclase activity (obsolete GO:0031279)","termid":"GO:0031279"}


id: GO:0001702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gastrulation process in which the initial invagination becomes the anus and the mouth forms second.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation with mouth forming second","secondary_identifiers":["GO:0048276","GO:0010003"],"synonyms":[{"name":"deuterostomic gastrulation","type":"exact"}],"termid":"GO:0001702"}


id: PBO:0065310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 30, pseudogene","termid":"PBO:0065310"}


id: GO:0099552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of lipid molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["PMID:21531987","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by lipid","termid":"GO:0099541"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by lipid, modulating synaptic transmission","termid":"GO:0099552"}


id: GO:0102956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + sinapoyl aldehyde = H+ + sinapaldehyde glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:sinapaldehyde 4-beta-D-glucosyltransferase activity (obsolete GO:0102956)","termid":"GO:0102956"}


id: PBO:0113070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of UDP-GlcNAc transferase; required for second step of dolichyl-linked oligosaccharide synthesis; anchors catalytic subunit Alg13p to ER membrane; localizes to the peroxisome; similar to bacterial and human glycosyltransferases; both human homologs ALG13 and ALG14 are required to complement yeast alg14 mutant; mutations of human ALG14 cause congenital myasthenic syndrome","termid":"PBO:0113070"}


id: MONDO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival degeneration","termid":"MONDO:0000949"},{"relation_name":"is_a","term_name":"pterygium","termid":"MONDO:0005085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival pterygium","secondary_identifiers":["DOID:10526","MEDGEN:1625284","UMLS:C4520843"],"synonyms":[{"name":"web eye","type":"exact"}],"termid":"MONDO:0001055","xrefs":{"Monarch":{"xref_id":"0001055"}}}


id: PBO:0051923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB5 antisense RNA 1","termid":"PBO:0051923"}


id: PBO:0087421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 9 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; required for electron transfer at the ubiquinol oxidase site of the complex","termid":"PBO:0087421"}


id: PBO:0050701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 14","termid":"PBO:0050701"}


id: PBO:0027413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027413"}


id: GO:0048212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which Golgi vesicle coat proteins are depolymerized, and released for reuse.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle uncoating","termid":"GO:0072319"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"Golgi vesicle uncoating","synonyms":[{"name":"Golgi vesicle coat depolymerization","type":"exact"},{"name":"Golgi vesicle coat protein depolymerization","type":"exact"},{"name":"Golgi-derived vesicle uncoating","type":"exact"},{"name":"dictyosome vesicle coat depolymerization","type":"narrow"}],"termid":"GO:0048212"}


id: MONDO:0017879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection caused by Hantaviruses. It manifests with flu-like symptoms but it rapidly progresses to life-threatening respiratory problems.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"hantavirus infectious disease","termid":"MONDO:0005780"},{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"},{"relation_name":"is_a","term_name":"viral respiratory tract infection","termid":"MONDO:0024352"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hantavirus pulmonary syndrome","secondary_identifiers":["EFO:0007296","MedDRA:10019143","MESH:D018804","NCIT:C84747","NORD:1216","icd11.foundation:582624609","MEDGEN:66205","GARD:69","Orphanet:319247","ICD10EXP:B33.4+","ICD9:480.8","DOID:14472","SCTID:120639003","ICD10EXP:J17.1*","UMLS:C0243025"],"synonyms":[{"name":"HARDS","type":"related"},{"name":"Hantavirus","type":"related"},{"name":"Hantavirus-associated respiratory distress syndrome","type":"related"},{"name":"four corners hantavirus","type":"related"}],"termid":"MONDO:0017879","xrefs":{"Monarch":{"xref_id":"0017879"}}}


id: GO:1900812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of helvolic acid.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"helvolic acid metabolic process","termid":"GO:1900810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"helvolic acid biosynthetic process","synonyms":[{"name":"Fumigacin anabolism","type":"related"},{"name":"Fumigacin biosynthesis","type":"related"},{"name":"Fumigacin biosynthetic process","type":"related"},{"name":"Fumigacin formation","type":"related"},{"name":"Fumigacin synthesis","type":"related"},{"name":"helvolic acid anabolism","type":"exact"},{"name":"helvolic acid biosynthesis","type":"exact"},{"name":"helvolic acid formation","type":"exact"},{"name":"helvolic acid synthesis","type":"exact"}],"termid":"GO:1900812"}


id: PBO:0040822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 2","termid":"PBO:0040822"}


id: PBO:0074973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-15","termid":"PBO:0074973"}


id: GO:0004985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an opioid (any narcotic derived from or resembling opium), and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:bf","PMID:20494127","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled opioid receptor activity","synonyms":[{"name":"opioid receptor activity","type":"broad"}],"termid":"GO:0004985"}


id: PBO:0114463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase sequence feature types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"go_cam_pathway","termid":"PBO:0114463"}


id: GO:0046268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of toluene-4-sulfonate, 4-methylbenzenesulfonate, the anion of sulfonic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene-4-sulfonate biosynthetic process (obsolete GO:0046268)","synonyms":[{"name":"4-toluenesulfonate biosynthesis","type":"exact"},{"name":"4-toluenesulfonate biosynthetic process","type":"exact"},{"name":"toluene-4-sulfonate anabolism","type":"exact"},{"name":"toluene-4-sulfonate biosynthesis","type":"exact"},{"name":"toluene-4-sulfonate biosynthetic process","type":"exact"},{"name":"toluene-4-sulfonate formation","type":"exact"},{"name":"toluene-4-sulfonate synthesis","type":"exact"},{"name":"toluene-4-sulphonate biosynthesis","type":"exact"},{"name":"toluene-4-sulphonate biosynthetic process","type":"exact"}],"termid":"GO:0046268"}


id: GO:0106148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxyindole-3- carbonyl nitrile (4-OH-ICN), a cyanogenic glucoside.","definition_xrefs":["PMID:26352477","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanogenic glycoside biosynthetic process","termid":"GO:0019756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"4-hydroxyindole-3- carbonyl nitrile biosynthesis","termid":"GO:0106148"}


id: PBO:0026781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_progression_following_cellular_response_to_hydroxyurea","termid":"PBO:0026781"}


id: PBO:0085190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two type I myosins; localizes to actin cortical patches; deletion of MYO3 has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO3 has a paralog, MYO5, that arose from the whole genome duplication","termid":"PBO:0085190"}


id: FYPO:0003444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which medial cortical nodes move in random directions such that they do not undergo an overall movement towards the cell center. During contractile ring assembly, medial cortical nodes normally move towards the cell center, and condense into a ring.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:24798735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal medial cortical node condensation","synonyms":[{"name":"abnormal medial cortical node condensation during mitotic cell cycle","type":"related"},{"name":"abnormal medial cortical node condensation during vegetative growth","type":"exact"},{"name":"abnormal medial cortical node migration","type":"exact"}],"termid":"FYPO:0003444"}


id: PBO:0027369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_amino_acid_level","termid":"PBO:0027369"}


id: PBO:0004072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic ATP-dependent RNA helicase Dbp5 (predicted)","termid":"PBO:0004072"}


id: PBO:0075555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPEM family member 3","termid":"PBO:0075555"}


id: GO:0042364
data:
  {"annotated_genes":["SJAG_00376","SJAG_00673","SJAG_00691","SJAG_03275","SJAG_00491","SJAG_01935","SJAG_03362","SJAG_02491","SJAG_00815","SJAG_02421","SJAG_03538","SJAG_00707","SJAG_00480","SJAG_01970","SJAG_00827","SJAG_02408","SJAG_02406","SJAG_00106","SJAG_04282","SJAG_01383","SJAG_00283","SJAG_01543","SJAG_02420","SJAG_04866","SJAG_02225","SJAG_05200","SJAG_00252","SJAG_04711","SJAG_01881","SJAG_00381","SJAG_04156","SJAG_01054","SJAG_04067","SJAG_01126","SJAG_03679","SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[79675,76696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[112745,60674,108667,106411,57102,69304,105110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[72715,77827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[114013,89360],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[78471,75553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[114723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[75820,64252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[112155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[75823,64250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[117502,78270,71608,66115,76767,60236,79041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[78751,61718,74352,77482,70506,74273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[65995,113919,78558,116350,113925,67669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[99850,110775,110776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of a diverse group of vitamins that are soluble in water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"vitamin biosynthetic process","termid":"GO:0009110"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00252":null,"SJAG_00283":null,"SJAG_00376":null,"SJAG_00381":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00815":null,"SJAG_00827":null,"SJAG_01054":null,"SJAG_01126":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null,"SJAG_01935":null,"SJAG_01970":null,"SJAG_02225":null,"SJAG_02360":null,"SJAG_02406":null,"SJAG_02408":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02491":null,"SJAG_03275":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_03679":null,"SJAG_04067":null,"SJAG_04156":null,"SJAG_04282":null,"SJAG_04711":null,"SJAG_04866":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"water-soluble vitamin biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"water-soluble vitamin anabolism","type":"exact"},{"name":"water-soluble vitamin biosynthesis","type":"exact"},{"name":"water-soluble vitamin formation","type":"exact"},{"name":"water-soluble vitamin synthesis","type":"exact"}],"termid":"GO:0042364","terms_by_termid":{"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042821":null,"GO:0042823":null,"GO:0046656":null,"GO:0090180":null}}


id: MONDO:1010210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant histiocytosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytosis, non-human animal","termid":"MONDO:1011436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant histiocytosis, non-human animal","secondary_identifiers":["OMIA:000620"],"termid":"MONDO:1010210","xrefs":{"Monarch":{"xref_id":"1010210"}}}


id: GO:0035872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a nucleotide-binding domain, leucine rich repeat containing receptor (NLR), and ending with the regulation of a downstream cellular process. NLRs are cytoplasmic receptors defined by their tripartite domain architecture that contains: a variable C-terminus, a middle nucleotide-binding domain, and a LRR domain that is variable in the repeats composition and number.","definition_xrefs":["GOC:sj","PMID:18280719","PMID:36973360","PMID:32838963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-168643"],"synonyms":[{"name":"NLR signaling pathway","type":"exact"},{"name":"NOD-like receptor signaling pathway","type":"related"},{"name":"nucleotide-binding domain leucine-rich repeat containing receptor signaling pathway","type":"exact"},{"name":"nucleotide-binding domain, leucine rich repeat containing receptor signal transduction","type":"exact"},{"name":"nucleotide-binding domain, leucine rich repeat containing receptor signal transduction pathway","type":"exact"},{"name":"nucleotide-binding domain, leucine rich repeat containing receptor signalling pathway","type":"exact"}],"termid":"GO:0035872"}


id: MONDO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coenzyme Q10 deficiency disease (obsolete MONDO:0000423)","termid":"MONDO:0000423","xrefs":{"Monarch":{"xref_id":"0000423"}}}


id: MONDO:0011801
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85929],"is_not":false,"summary":null,"term":"MONDO:0011801"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia with axonal neuropathy type 1 is a rare, genetic neurological disorder characterized by a late childhood onset of slowly progressive cerebellar ataxia. Initial manifestations include weakness and atrophy of distal limb muscles, areflexia and loss of pain, vibration and touch sensations in upper and lower extremities. Gaze nystagmus, cerebellar dysarthria, peripheral neuropathy, stepagge gait and pes cavus develop as disease progresses. Cerebellar atrophy (especially of the vermis) is present in all affected individuals. Additional reported manifestations include seizures, mild brain atrophy, mild hypercholesterolemia and borderline hypoalbuminemia.","definition_xrefs":["Orphanet:94124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy","termid":"MONDO:0020771"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0006025","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4759870","GARD:10000","MESH:C537313","DOID:0090115","MEDGEN:1683470","NORD:1730","SCTID:765091006","OMIM:607250"],"synonyms":[{"name":"SCAN1","type":"exact"},{"name":"Spinocerebellar Ataxia with Axonal Neuropathy","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia with axonal neuropathy","type":"broad"},{"name":"spinocerebellar ataxia autosomal recessive with axonal neuropathy","type":"related"},{"name":"spinocerebellar ataxia type 1 with axonal neuropathy","type":"exact"},{"name":"spinocerebellar ataxia with axonal neuropathy","type":"related"},{"name":"spinocerebellar ataxia with axonal neuropathy type 1","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy","type":"broad"},{"name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 1","type":"exact"}],"termid":"MONDO:0011801","terms_by_termid":{"MONDO:0011801":null},"xrefs":{"Monarch":{"xref_id":"0011801"}}}


id: GO:0070271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a protein complex. Includes the synthesis of non-protein components, and those protein modifications that are involved in synthesis or assembly of the complex.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein complex biogenesis (obsolete GO:0070271)","synonyms":[{"name":"protein complex biogenesis and assembly","type":"exact"}],"termid":"GO:0070271"}


id: GO:0045522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-26 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-26 receptor binding","synonyms":[{"name":"IL-26","type":"narrow"},{"name":"interleukin-26 receptor ligand","type":"narrow"}],"termid":"GO:0045522"}


id: GO:0032484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the RaI subfamily relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Ral protein signal transduction","termid":"GO:0032484"}


id: GO:1904302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maternal process involved in parturition.","definition_xrefs":["PMID:1849751","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of maternal process involved in parturition","termid":"GO:1904301"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"maternal process involved in parturition","termid":"GO:0060137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of maternal process involved in parturition","synonyms":[{"name":"down regulation of maternal process involved in parturition","type":"exact"},{"name":"down-regulation of maternal process involved in parturition","type":"exact"},{"name":"downregulation of maternal process involved in parturition","type":"exact"},{"name":"inhibition of maternal process involved in parturition","type":"narrow"}],"termid":"GO:1904302"}


id: MONDO:0020028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare respiratory allergy.","gene_count":0,"genotype_count":0,"name":"obsolete rare allergic respiratory disease (obsolete MONDO:0020028)","secondary_identifiers":["Orphanet:98052"],"synonyms":[{"name":"rare allergic respiratory disease","type":"exact"},{"name":"rare respiratory allergy","type":"exact"}],"termid":"MONDO:0020028","xrefs":{"Monarch":{"xref_id":"0020028"}}}


id: MONDO:0011090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated hereditary congenital facial paralysis (IHCFP) is an extremely rare neurological disorder presumed to result from maldevelopment of the facial nucleus and/or cranial nerve and has been reported in fewer than 10 families to date. It manifests as non-progressive, isolated, unilateral or bilateral, symmetrical or asymmetrical facial palsy. Involvement of the branches of the facial nerve can be unequal.","definition_xrefs":["Orphanet:306527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated hereditary congenital facial paralysis","secondary_identifiers":["MESH:C563309","SCTID:733091002","UMLS:C4518577","GARD:8583","MEDGEN:1381843","OMIMPS:601471"],"synonyms":[{"name":"HCFP","type":"broad"},{"name":"MBS2 (formerly)","type":"related"},{"name":"Mobius syndrome 2 (formerly)","type":"related"},{"name":"Moebius syndrome 2 (formerly)","type":"related"},{"name":"facial palsy, congenital, unilateral or bilateral","type":"related"},{"name":"facial paresis hereditary congenital","type":"related"},{"name":"facial paresis, hereditary congenital","type":"related"},{"name":"hereditary congenital facial paresis","type":"related"}],"termid":"MONDO:0011090","xrefs":{"Monarch":{"xref_id":"0011090"}}}


id: PBO:0091643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane fluoride export channel Fex2","termid":"PBO:0091643"}


id: GO:0045211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"postsynaptic membrane","synonyms":[{"name":"post-synaptic membrane","type":"exact"}],"termid":"GO:0045211"}


id: MONDO:0044067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection by any of the Candida species in a sterile body compartment.","definition_xrefs":["NCIT:C116813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidiasis, invasive","secondary_identifiers":["MEDGEN:296300","MESH:D058365","UMLS:C1609535","Orphanet:636945"],"synonyms":[{"name":"candidiases, invasive","type":"exact"},{"name":"invasive candidiases","type":"exact"},{"name":"invasive candidiasis","type":"exact"}],"termid":"MONDO:0044067","xrefs":{"Monarch":{"xref_id":"0044067"}}}


id: GO:0090730
data:
  {"annotated_genes":["SJAG_02275","SJAG_02374","SJAG_03789","SJAG_01581"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64842,92017,95284,118883],"is_not":false,"summary":null,"term":"GO:0090730"}]},"cv_name":"cellular_component","definition":"A four subunit complex, that comprises all the necessary RNA processing enzymes (endonuclease, polynucleotide kinase, and exonuclease) to mediate 'cistronic rRNA transcript ITS2 (internal transcribed spacer) cleavage' (GO:0000448).","definition_xrefs":["GOC:vw","PMID:26638174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"},{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"},{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01581":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Las1 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"Las1-Grc3-Rat1-Rai1","type":"narrow"}],"termid":"GO:0090730","terms_by_termid":{"GO:0090730":null}}


id: PBO:0089102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15a","termid":"PBO:0089102"}


id: GO:0019513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactose, catalyzed by the enzyme glucoside 3-dehydrogenase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose catabolic process","termid":"GO:0005990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"lactose catabolic process, using glucoside 3-dehydrogenase","secondary_identifiers":["MetaCyc:LACTOSEUTIL-PWY"],"synonyms":[{"name":"lactose breakdown, using glucoside 3-dehydrogenase","type":"exact"},{"name":"lactose degradation, using glucoside 3-dehydrogenase","type":"exact"}],"termid":"GO:0019513"}


id: PBO:0049278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 to S phase transition 1","termid":"PBO:0049278"}


id: PBO:0052723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 15","termid":"PBO:0052723"}


id: PBO:0065225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 5 like","termid":"PBO:0065225"}


id: PBO:0061676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 85","termid":"PBO:0061676"}


id: GO:0000426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Degradation of a peroxisome by microautophagy.","definition_xrefs":["PMID:12914914","PMID:15350980","GOC:autophagy","GOC:pad","PMID:16973210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"},{"relation_name":"is_a","term_name":"autophagy of peroxisome","termid":"GO:0030242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"micropexophagy","termid":"GO:0000426"}


id: GO:0035504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of myosin light chain kinase activity.","definition_xrefs":["GOC:go_curators","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of myosin light chain kinase activity (obsolete GO:0035504)","termid":"GO:0035504"}


id: PBO:0055097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2515","termid":"PBO:0055097"}


id: PBO:0043102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 14","termid":"PBO:0043102"}


id: FYPO:0003650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to glucose starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level during cellular response to glucose starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to glucose starvation","type":"related"},{"name":"decreased protein level during cellular response to glucose depletion","type":"exact"},{"name":"decreased protein level during cellular response to glucose deprivation","type":"exact"},{"name":"decreased protein level during cellular response to glucose limitation","type":"related"},{"name":"decreased protein level during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"decreased protein level during glucose starvation","type":"exact"},{"name":"reduced protein level during cellular response to glucose starvation","type":"exact"}],"termid":"FYPO:0003650"}


id: GO:0048183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta subunits (sometimes known as activin beta or activin/inhibin beta), inhibin beta-A and inhibin beta-B.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin complex","termid":"GO:0048180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"activin AB complex","synonyms":[{"name":"inhibin beta-A","type":"narrow"},{"name":"inhibin beta-B","type":"narrow"}],"termid":"GO:0048183"}


id: PBO:0060962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFS1 cysteine desulfurase","termid":"PBO:0060962"}


id: PBO:0067222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 291, pseudogene","termid":"PBO:0067222"}


id: GO:0044754
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of secondary lysosome in which a primary lysosome has fused with the outer membrane of an autophagosome or amphisome. It is involved in the second step of autophagy in which it degrades contents with acidic lysosomal hydrolases.","definition_xrefs":["PMID:24657946","GOC:sart","NIF_Subcellular:sao8444068431","PMID:19008921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary lysosome","termid":"GO:0005767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"autolysosome","synonyms":[{"name":"AVd","type":"exact"},{"name":"degrading autophagic vacuole","type":"exact"}],"termid":"GO:0044754"}


id: RO:0008501
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship wherein a plant or algae is living on the outside surface of another plant.","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphyte_of","termid":"RO:0008501"}


id: GO:0007606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of chemical stimulus","synonyms":[{"name":"chemosensory perception","type":"exact"}],"termid":"GO:0007606"}


id: PATO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of whether the bearer has enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sufficiency","synonyms":[{"name":"adequacy","type":"related"}],"termid":"PATO:0001626"}


id: GO:0090420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving naphthalene-containing compounds.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene-containing compound metabolic process (obsolete GO:0090420)","termid":"GO:0090420"}


id: MONDO:0003473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the spinal cord.","definition_xrefs":["NCIT:C3875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"},{"relation_name":"is_a","term_name":"ependymal tumor of spinal cord","termid":"MONDO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal cord ependymoma","secondary_identifiers":["MONDO:0021544","MEDGEN:65968","SCTID:254949006","DOID:5503","UMLS:C0238432"],"synonyms":[{"name":"ependymal neoplasm of the spinal cord","type":"exact"},{"name":"ependymoma of spinal cord","type":"exact"},{"name":"ependymoma of the spinal cord","type":"exact"},{"name":"spinal cord ependymoma","type":"exact"}],"termid":"MONDO:0003473","xrefs":{"Monarch":{"xref_id":"0003473"}}}


id: FYPO:0005029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of the gamma-tubulin complex to the spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","termid":"FYPO:0004589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body","synonyms":[{"name":"decreased gamma-tubulin complex localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased gamma-tubulin complex localization to mitotic SPB","type":"exact"},{"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"reduced gamma-tubulin complex localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0005029"}


id: GO:0032213
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the semi-conservative replication of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"regulates","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"regulation of telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032213","terms_by_termid":{"GO:0032215":null}}


id: PR:Q09669
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alcohol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.06c","secondary_identifiers":["UniProtKB:Q09669"],"synonyms":[{"name":"Spom972h-yiaY","type":"exact"},{"name":"alcohol dehydrogenase IV (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09669"}


id: MONDO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the nasal cavity","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"nasal cavity neoplasm","termid":"MONDO:0004756"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity cancer","secondary_identifiers":["NCIT:C4918","UMLS:C0728864","ICD9:160.0","DOID:10811","SCTID:363422006","MEDGEN:152601"],"synonyms":[{"name":"cancer of nasal cavity","type":"exact"},{"name":"malignant nasal cavity neoplasm","type":"exact"},{"name":"malignant nasal cavity tumor","type":"exact"},{"name":"malignant nasal cavity tumour","type":"exact"},{"name":"malignant neoplasm of nasal cavities","type":"exact"},{"name":"malignant neoplasm of nasal cavity","type":"exact"},{"name":"malignant neoplasm of the nasal cavity","type":"exact"},{"name":"malignant tumor of nasal cavity","type":"exact"},{"name":"malignant tumor of the nasal cavity","type":"exact"},{"name":"malignant tumour of nasal cavity","type":"exact"},{"name":"malignant tumour of the nasal cavity","type":"exact"},{"name":"nasal cavity cancer","type":"exact"}],"termid":"MONDO:0001128","xrefs":{"Monarch":{"xref_id":"0001128"}}}


id: MONDO:0015681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pervasive developmental disorder with a disease onset before the age of three and characterized by a dramatic loss of behavioral and developmental functioning after atleast two years of normal development. Manifestations of the disease include loss of speech, incontinence, communication and social interaction problems, stereotypical autistic behaviors and dementia.","definition_xrefs":["Orphanet:168782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"childhood disintegrative disorder","secondary_identifiers":["MEDGEN:472967","icd11.foundation:1460615954","MedDRA:10008522","GARD:6040","ICD9:299.1","SCTID:71961003","DOID:13487","SCTID:61831009","UMLS:C0236791","NCIT:C97164"],"synonyms":[{"name":"childhood disintegrative disease","type":"exact"},{"name":"dementia infantilis","type":"exact"},{"name":"disintegrative psychosis","type":"exact"},{"name":"heller syndrome","type":"exact"},{"name":"heller's syndrome","type":"exact"},{"name":"symbiotic psychosis","type":"exact"}],"termid":"MONDO:0015681","xrefs":{"Monarch":{"xref_id":"0015681"}}}


id: MONDO:0003803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the aortic valve.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve disorder","termid":"MONDO:0002869"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"is_a","term_name":"cardiac ventricle disorder","termid":"MONDO:0045001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve disorder","secondary_identifiers":["NCIT:C78650","UMLS:C1260873","EFO:0009531","ICD9:424.1","MEDGEN:226776","ICD9:395","DOID:62"],"synonyms":[{"name":"aortic valve disease","type":"exact"},{"name":"aortic valve disease or disorder","type":"exact"},{"name":"aortic valve disorder","type":"exact"},{"name":"disease of aortic valve","type":"exact"},{"name":"disease or disorder of aortic valve","type":"exact"},{"name":"disorder of aortic valve","type":"exact"}],"termid":"MONDO:0003803","xrefs":{"Monarch":{"xref_id":"0003803"}}}


id: GO:0098697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ryanodine-sensitive calcium-release channel activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ryanodine-sensitive calcium-release channel activity","termid":"GO:0005219"},{"relation_name":"is_a","term_name":"calcium-induced calcium release activity involved in regulation of postsynaptic cytosolic calcium ion concentration","termid":"GO:1905058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ryanodine-sensitive calcium-release channel activity involved in regulation of postsynaptic cytosolic calcium levels","termid":"GO:0098697"}


id: PBO:0087201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosyl-L-homocysteine hydrolase; catabolizes S-adenosyl-L-homocysteine which is formed after donation of the activated methyl group of S-adenosyl-L-methionine (AdoMet) to an acceptor; regulates cellular lipid homoeostasis by regulating phosphatidylcholine(PC)synthesis and triacylglycerol (TG) levels","termid":"PBO:0087201"}


id: PBO:0085734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in threonylcarbamoyl adenosine biosynthesis; Sua5p and Qri7p are necessary and sufficient for RNA t6A modification in vitro; highly conserved mitochondrial protein; essential for t6A modification of mitochondrial tRNAs that decode ANN codons; similar to Kae1p and E. coli YgjD, both of which are also required for tRNA t6A modification; when directed to the cytoplasm, complements the essential function of Kae1p in the KEOPS complex","termid":"PBO:0085734"}


id: FYPO:0000172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A meiosis phenotype in which meiotic telomere clustering is abnormal. Meiotic telomere clustering is the dynamic reorganization of telomeres in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body.","definition_xrefs":["GO:0045141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"},{"relation_name":"is_a","term_name":"abnormal telomere localization to nuclear periphery","termid":"FYPO:0007418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abnormal meiotic telomere clustering","synonyms":[{"name":"abnormal bouquet formation","type":"exact"}],"termid":"FYPO:0000172"}


id: PBO:0070180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 95 pseudogene","termid":"PBO:0070180"}


id: PBO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family (predicted)","termid":"PBO:0001885"}


id: PBO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.31","termid":"PBO:0002348"}


id: GO:0009472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c3 (tetraheme) (obsolete GO:0009472)","synonyms":[{"name":"cytochrome c3 (tetraheme)","type":"exact"}],"termid":"GO:0009472"}


id: GO:0009164
data:
  {"annotated_genes":["SJAG_03771","SJAG_04927","SJAG_02580","SJAG_02959","SJAG_01673","SJAG_01359","SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87898,87899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[70166,70264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[91397,75587,112504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[90978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule catabolic process","termid":"GO:0034656"},{"relation_name":"is_a","term_name":"glycosyl compound catabolic process","termid":"GO:1901658"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_03771":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleoside catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside breakdown","type":"exact"},{"name":"nucleoside catabolism","type":"exact"},{"name":"nucleoside degradation","type":"exact"}],"termid":"GO:0009164","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0009972":null,"GO:0046135":null}}


id: PBO:0045167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 1","termid":"PBO:0045167"}


id: PBO:0088465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation HECT-type ubiquitin-protein ligase E3 Ipa1","termid":"PBO:0088465"}


id: GO:0098513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a humidity stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of humidity","termid":"GO:0098513"}


id: GO:0004879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity regulated by binding to a ligand that modulates the transcription of specific gene sets transcribed by RNA polymerase II. Nuclear receptor ligands are usually lipid-based (such as a steroid hormone) and the binding of the ligand to its receptor often occurs in the cytosol, which leads to its translocation to the nucleus.","definition_xrefs":["GOC:txnOH-2018","PMID:23457262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity, RNA polymerase II-specific","termid":"GO:0000981"},{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"},{"relation_name":"is_a","term_name":"ligand-modulated transcription factor activity","termid":"GO:0098531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003700","GO:0003674","GO:0038023","GO:0140110"],"is_obsolete":false,"name":"nuclear receptor activity","secondary_identifiers":["GO:0004882","GO:0004884","GO:0038050","GO:0004887","GO:0038052","GO:0004886","GO:0008434","GO:0038051","GO:0003708","GO:0004880"],"synonyms":[{"name":"1,25-(OH)2D3 receptor activity","type":"narrow"},{"name":"9-cis retinoic acid receptor activity","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, estrogen-activated sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, glucocorticoid-activated sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding","type":"exact"},{"name":"RXR","type":"narrow"},{"name":"androgen receptor activity","type":"narrow"},{"name":"calcitriol receptor activity","type":"narrow"},{"name":"ecdysteroid hormone receptor activity","type":"narrow"},{"name":"estrogen nuclear receptor activity","type":"narrow"},{"name":"glucocorticoid receptor activity","type":"narrow"},{"name":"juvenile hormone receptor activity","type":"narrow"},{"name":"ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity","type":"exact"},{"name":"ligand-dependent nuclear receptor activity","type":"related"},{"name":"ligand-dependent transcription factor activity","type":"related"},{"name":"nuclear hormone receptor","type":"narrow"},{"name":"retinoic acid receptor activity","type":"narrow"},{"name":"retinoid-X receptor activity","type":"narrow"},{"name":"thyroid hormone receptor activity","type":"narrow"},{"name":"vitamin A receptor activity","type":"narrow"},{"name":"vitamin D receptor activity","type":"narrow"},{"name":"vitamin D3 receptor activity","type":"narrow"}],"termid":"GO:0004879"}


id: FYPO:0002421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that has an abnormal shape and undergoes one or two rounds of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division","termid":"FYPO:0001042"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, abnormal cell shape","synonyms":[{"name":"inviable following spore germination, single or double cell division, abnormal cell shape","type":"exact"},{"name":"inviable germinated spore, single cell or double division, abnormal cell shape","type":"exact"},{"name":"lethal after spore germination, single or double cell division, abnormal cell shape","type":"exact"}],"termid":"FYPO:0002421"}


id: MONDO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A capillary hemangioma of the skin, presenting as a red papular lesion.","definition_xrefs":["NCIT:C4390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary hemangioma","termid":"MONDO:0002407"},{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cherry hemangioma","secondary_identifiers":["MEDGEN:87470","SCTID:5050001","DOID:2495","UMLS:C0343082"],"synonyms":[{"name":"Senile angioma","type":"exact"},{"name":"Senile hemangioma","type":"exact"},{"name":"Senile naevus of skin","type":"exact"},{"name":"cherry angioma","type":"exact"},{"name":"cherry hemangioma","type":"exact"}],"termid":"MONDO:0002323","xrefs":{"Monarch":{"xref_id":"0002323"}}}


id: MONDO:0957576
data:
  {"annotated_genes":["SJAG_01270","SJAG_00078"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86708,86709],"is_not":false,"summary":null,"term":"MONDO:0957576"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease","termid":"MONDO:0005180"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_01270":null},"genotype_count":0,"is_obsolete":false,"name":"parkinson disease 25, autosomal recessive early-onset, with impaired intellectual development","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620482","UMLS:C5882680","DOID:0070486","MEDGEN:1845571"],"termid":"MONDO:0957576","terms_by_termid":{"MONDO:0957576":null},"xrefs":{"Monarch":{"xref_id":"0957576"}}}


id: PBO:0039353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylmethionine decarboxylase 1 pseudogene 3","termid":"PBO:0039353"}


id: GO:1990413
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small pigmented organelle used in single-celled organisms to detect light.","definition_xrefs":["Wikipedia:Eyespot_apparatus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"eyespot apparatus","synonyms":[{"name":"eyespot","type":"related"},{"name":"stigma","type":"related"}],"termid":"GO:1990413"}


id: GO:0071472
data:
  {"annotated_genes":["SJAG_00661","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100497],"is_not":false,"summary":null,"term":"GO:0071472"},{"annotations":[89835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to salt stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to ionic osmotic stress","type":"exact"},{"name":"cellular salinity response","type":"exact"}],"termid":"GO:0071472","terms_by_termid":{"GO:0071472":null,"GO:0071473":null}}


id: PBO:0086787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0086787"}


id: FYPO:0001688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing brefeldin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on brefeldin A","synonyms":[{"name":"normal cell population growth in presence of brefeldin A","type":"exact"},{"name":"normal cell population growth on BFA","type":"exact"},{"name":"normal cell population growth on brefeldin A","type":"exact"},{"name":"normal cellular response to brefeldin A","type":"related"},{"name":"normal vegetative cell population growth on brefeldin A","type":"exact"}],"termid":"FYPO:0001688"}


id: GO:0043532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to angiostatin, a proteolytic product of plasminogen or plasmin containing at least one intact kringle domain, and which is an inhibitor of angiogenesis.","definition_xrefs":["PMID:16043488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"angiostatin binding","termid":"GO:0043532"}


id: PBO:0055564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3000","termid":"PBO:0055564"}


id: GO:0080188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A small RNA-based gene silencing process in which small interfering RNAs (siRNAs) guide DNA methylation to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription. In general this process consists of three phases: biogenesis of siRNAs, scaffold RNA production, and the formation of the guiding complex that recruits de novo DNA methyltransferases to the target loci. Transposable elements are silenced by this mechanism.","definition_xrefs":["PMID:33031395","PMID:21420348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA methylation-dependent constitutive heterochromatin formation","termid":"GO:0006346"},{"relation_name":"is_a","term_name":"siRNA-mediated heterochromatin formation","termid":"GO:0141194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"gene silencing by siRNA-directed DNA methylation","synonyms":[{"name":"RNA-directed DNA methylation","type":"related"},{"name":"RdDM","type":"exact"},{"name":"gene silencing by RNA-directed DNA methylation","type":"related"}],"termid":"GO:0080188"}


id: MONDO:0005766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary diseases caused by fungal infections, usually through hematogenous spread.","definition_xrefs":["MESH:D008172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal lung infectious disease","secondary_identifiers":["UMLS:C0024116","EFO:0007278","MEDGEN:6144"],"synonyms":[{"name":"Fungi caused lung disease","type":"exact"},{"name":"Fungi lung disease","type":"exact"},{"name":"fungal disease, pulmonary","type":"related"},{"name":"fungal diseases, pulmonary","type":"related"},{"name":"fungal infection, pulmonary","type":"related"},{"name":"fungal infections, pulmonary","type":"related"},{"name":"fungal lung disease","type":"related"},{"name":"fungal lung diseases","type":"related"},{"name":"lung disease, fungal","type":"related"},{"name":"pulmonary fungal disease","type":"related"},{"name":"pulmonary fungal diseases","type":"related"},{"name":"pulmonary fungal infection","type":"related"},{"name":"pulmonary fungal infections","type":"related"}],"termid":"MONDO:0005766","xrefs":{"Monarch":{"xref_id":"0005766"}}}


id: PBO:0056509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallo-beta-lactamase domain containing 1","termid":"PBO:0056509"}


id: GO:0071502
data:
  {"annotated_genes":["SJAG_02381"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91136],"is_not":false,"summary":null,"term":"GO:0071502"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to temperature stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to thermal stimulus","type":"exact"}],"termid":"GO:0071502","terms_by_termid":{"GO:0071502":null}}


id: MONDO:1030009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An atrial fibrillation disorder characterized by continuous atrial fibrillation that lasts for more than seven days.","definition_xrefs":["PMID:38033089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial fibrillation","termid":"MONDO:0004981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"persistent atrial fibrillation","secondary_identifiers":["UMLS:C2585653","MESH:D001281","ICD10CM:I48.1","SCTID:440059007","MEDGEN:749907"],"synonyms":[{"name":"persistent AF","type":"exact"}],"termid":"MONDO:1030009","xrefs":{"Monarch":{"xref_id":"1030009"}}}


id: PATO:0000248
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000248 pupillary reflex (obsolete PATO:0000248)","termid":"PATO:0000248"}


id: PBO:0065815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4A, member RAS oncogene family","termid":"PBO:0065815"}


id: PATO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000220 regeneration (obsolete PATO:0000220)","termid":"PATO:0000220"}


id: GO:0090482
data:
  {"annotated_genes":["SJAG_02962","SJAG_02779","SJAG_02780","SJAG_00835","SJAG_04673","SJAG_03503","SJAG_05175","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79571,72124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[74216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[101003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[72836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[103958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[90477,90478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a vitamin from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03503":null,"SJAG_03652":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"vitamin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051183"],"synonyms":[{"name":"vitamin or cofactor transporter activity","type":"broad"},{"name":"vitamin transporter activity","type":"related"}],"termid":"GO:0090482","terms_by_termid":{"GO:0008517":null,"GO:0015225":null,"GO:0015233":null,"GO:0015234":null,"GO:0034216":null,"GO:0090422":null}}


id: MONDO:0006569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonspecific term used to denote any cutaneous lesion or group of lesions, or eruptions of any type on the leg. (From Stedman, 25th ed)","definition_xrefs":["MESH:D007868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"leg dermatosis","secondary_identifiers":["UMLS:C0023219","DOID:3142","MEDGEN:9700"],"termid":"MONDO:0006569","xrefs":{"Monarch":{"xref_id":"0006569"}}}


id: GO:0009573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the chloroplast, containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribulose bisphosphate carboxylase complex","termid":"GO:0048492"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"chloroplast ribulose bisphosphate carboxylase complex","synonyms":[{"name":"chloroplast RubisCO complex","type":"exact"}],"termid":"GO:0009573"}


id: MONDO:0005812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute viral infection of the respiratory tract, occurring in isolated cases, in epidemics, or in pandemics; it is caused by serologically different strains of viruses (influenzaviruses) designated A, B, and C, has a 3-day incubation period, and usually lasts for 3 to 10 days. It is marked by inflammation of the nasal mucosa, pharynx, and conjunctiva; headache; myalgia; often fever, chills, and prostration; and occasionally involvement of the myocardium or central nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral respiratory tract infection","termid":"MONDO:0024352"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"influenza","secondary_identifiers":["SCTID:61700007","UMLS:C0021400","MESH:D007251","MEDGEN:9466","icd11.foundation:145723401","NCIT:C53482","EFO:0007328","ICD9:487.8","DOID:8469","ICD9:487","MESH:D009976"],"synonyms":[{"name":"Influenza with other manifestations","type":"exact"},{"name":"flu","type":"exact"},{"name":"influenza infection","type":"exact"},{"name":"influenza with non-respiratory manifestation","type":"exact"},{"name":"orthomyxoviridae caused disease or disorder","type":"exact"},{"name":"orthomyxoviridae disease or disorder","type":"exact"},{"name":"orthomyxoviridae infectious disease","type":"exact"}],"termid":"MONDO:0005812","xrefs":{"Monarch":{"xref_id":"0005812"}}}


id: MONDO:0008694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoprogeria is characterized by intellectual deficit associated with progressive spastic quadriplegia, microcephaly, glaucoma, absence of the eyebrows and eyelashes, and a malformation of the nose. It has been described in two brothers.","definition_xrefs":["Orphanet:2985"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoprogeria syndrome","secondary_identifiers":["MEDGEN:163218","MESH:C563111","UMLS:C0796125","OMIM:200130","SCTID:733086003","GARD:415"],"synonyms":[{"name":"Hal-Berg-Rudolph syndrome","type":"exact"},{"name":"absent eyebrows and eyelashes with intellectual disability","type":"related"},{"name":"absent eyebrows and eyelashes with mental retardation","type":"related"},{"name":"absent eyebrows and eyelashes-intellectual disability syndrome","type":"exact"},{"name":"eyebrows and eyelashes absence-intellectual disability syndrome","type":"exact"},{"name":"intellectual disability, absence of eyebrows and eyelashes, progressive spastic quadriplegia, microcephaly, glaucoma, and small, beaked nose","type":"related"},{"name":"mental retardation, absence of eyebrows and eyelashes, progressive spastic quadriplegia, microcephaly, glaucoma, and small, beaked nose","type":"related"},{"name":"pseudoprogeria syndrome","type":"exact"}],"termid":"MONDO:0008694","xrefs":{"Monarch":{"xref_id":"0008694"}}}


id: PBO:0078617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 66","termid":"PBO:0078617"}


id: PBO:0047130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 170 member B","termid":"PBO:0047130"}


id: PBO:0002289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase Imt1","termid":"PBO:0002289"}


id: GO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lens are generated and organized. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens morphogenesis in camera-type eye","synonyms":[{"name":"lens morphogenesis","type":"exact"},{"name":"lens morphogenesis in camera-style eye","type":"exact"}],"termid":"GO:0002089"}


id: GO:0000977
data:
  {"annotated_genes":["SJAG_02810","SJAG_02730","SJAG_00266","SJAG_02252","SJAG_01343","SJAG_04421","SJAG_00304","SJAG_01930","SJAG_02406","SJAG_01243","SJAG_02052","SJAG_04584","SJAG_00861","SJAG_02326","SJAG_06599","SJAG_05343","SJAG_02048","SJAG_01062","SJAG_01725","SJAG_01583","SJAG_00802","SJAG_00210","SJAG_04009","SJAG_03538","SJAG_02938","SJAG_00045","SJAG_04839","SJAG_03388","SJAG_01916","SJAG_03241","SJAG_00037","SJAG_01740","SJAG_03622","SJAG_00987","SJAG_03346","SJAG_03473","SJAG_02218","SJAG_03143","SJAG_03519","SJAG_03918","SJAG_01157","SJAG_02472","SJAG_02138","SJAG_00792","SJAG_00979","SJAG_00693","SJAG_03911","SJAG_04191","SJAG_04712","SJAG_02956","SJAG_05006","SJAG_00926","SJAG_00421","SJAG_03183","SJAG_02709","SJAG_01441","SJAG_01694","SJAG_00741","SJAG_02149","SJAG_04249","SJAG_05247","SJAG_02458","SJAG_00698","SJAG_06576","SJAG_03879","SJAG_00664","SJAG_01307","SJAG_04813","SJAG_02569","SJAG_04388","SJAG_03484","SJAG_00163","SJAG_03735","SJAG_04036","SJAG_02311","SJAG_00386","SJAG_05288","SJAG_04092","SJAG_04855","SJAG_05153","SJAG_02752","SJAG_04381","SJAG_04749","SJAG_00124","SJAG_05337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67003,77351],"is_not":false,"summary":null,"term":"GO:0000977"},{"annotations":[72819,95071,69676,104275,116801,89364,88723,79942,92240,102369,73070,97860,78389,88353,89116,97252,97859,114018,101811,97863,104774,76126,116939,73734,75183,80255,97382,97861,97862,79865,88779,112216,72453,76235,106444,95052,79827,73406,112257,115166,111198,77956,74716,72236,92792,75904,103877,107056,80108,111234,75385,93629,99828,74479,89790,100452,96903,74414,75241,96366,80763,118686,107899,70453,72420,90423,109517,102604,78711,96017,98743,108960,111392,97694,76636,111218,74184,103020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[107381,109138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[112217,95904,89606,94471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000979"},{"annotations":[107900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"}]},"cv_name":"molecular_function","definition":"Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00045":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00741":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02458":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02810":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04381":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0000976","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001012"],"synonyms":[{"name":"RNA polymerase II regulatory region DNA binding","type":"related"}],"termid":"GO:0000977","terms_by_termid":{"GO:0000977":null,"GO:0000978":null,"GO:0000979":null,"GO:0001162":null,"GO:0044377":null}}


id: FYPO:0000491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial genome maintenance does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial genome maintenance","termid":"FYPO:0000490"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitochondrial genome maintenance","synonyms":[{"name":"abolished mitochondrial genome maintenance during mitotic cell cycle","type":"related"},{"name":"absent mitochondrial genome maintenance","type":"exact"},{"name":"mitochondrial genome maintenance abolished","type":"exact"},{"name":"mitochondrial genome maintenance abolished during vegetative growth","type":"exact"},{"name":"mitochondrial genome maintenance: absent","type":"related"}],"termid":"FYPO:0000491"}


id: PBO:0050212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 29","termid":"PBO:0050212"}


id: GO:2000734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000733"},{"relation_name":"negatively_regulates","term_name":"glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"negative regulation of GDNF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell line-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000734"}


id: PBO:0058066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4285","termid":"PBO:0058066"}


id: GO:2000583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010640"},{"relation_name":"regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000583"}


id: PBO:0065139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKX pseudogene 2","termid":"PBO:0065139"}


id: PBO:0001831
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative polyadenylation","termid":"PBO:0001831"}


id: PR:Q9UTG4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2602 gene.","definition_xrefs":["UniProtKB:Q9UTG4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.11c","synonyms":[{"name":"Spom972h-rps2602","type":"exact"}],"termid":"PR:Q9UTG4"}


id: MONDO:0003442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary epithelial neoplasm that involves the urinary bladder urothelium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary urothelial neoplasm","termid":"MONDO:0003443"},{"relation_name":"is_a","term_name":"urinary bladder neoplasm","termid":"MONDO:0004987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder papillary urothelial neoplasm","secondary_identifiers":["NCIT:C39857","UMLS:C1511197","DOID:5432","MEDGEN:267741"],"synonyms":[{"name":"bladder papillary transitional cell neoplasm","type":"exact"},{"name":"bladder papillary urothelial neoplasm","type":"exact"},{"name":"urinary bladder papillary transitional cell neoplasm","type":"exact"},{"name":"urinary bladder papillary urothelial neoplasm","type":"exact"},{"name":"urinary bladder urothelium papillary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0003442","xrefs":{"Monarch":{"xref_id":"0003442"}}}


id: PBO:0002919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2 OG-Fe(II) oxygenase superfamily protein Ofd2","termid":"PBO:0002919"}


id: PBO:0056535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coiled-coil domain 1","termid":"PBO:0056535"}


id: GO:2000175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pro-T cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"negative regulation of lymphoid progenitor cell differentiation","termid":"GO:1905457"},{"relation_name":"is_a","term_name":"regulation of pro-T cell differentiation","termid":"GO:2000174"},{"relation_name":"negatively_regulates","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pro-T cell differentiation","synonyms":[{"name":"negative regulation of pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:2000175"}


id: PBO:0058568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6510","termid":"PBO:0058568"}


id: GO:0019953
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id: PBO:0053561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 571","termid":"PBO:0053561"}


id: PBO:0088083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein that interacts with Cdc48p; ubiquitin regulatory X is also known as UBX","termid":"PBO:0088083"}


id: GO:0008703
data:
  {"annotated_genes":["SJAG_00491"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66114],"is_not":false,"summary":null,"term":"GO:0008703"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-6-(5-phosphoribitylamino)uracil + NADP+ = 5-amino-6-(5-phosphoribosylamino)uracil + H+ + NADPH.","definition_xrefs":["EC:1.1.1.193","RHEA:17845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00491":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"5-amino-6-(5-phosphoribosylamino)uracil reductase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["MetaCyc:RIBOFLAVINSYNREDUC-RXN","KEGG_REACTION:R03458"],"synonyms":[{"name":"5-amino-6-(5'-phosphoribosylamino)uracil reductase activity","type":"exact"},{"name":"5-amino-6-(5-phosphoribitylamino)uracil:NADP+ 1'-oxidoreductase activity","type":"related"},{"name":"aminodioxyphosphoribosylaminopyrimidine reductase activity","type":"related"}],"termid":"GO:0008703","terms_by_termid":{"GO:0008703":null}}


id: MONDO:0044924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloid leukemia with mutated CEBPA (obsolete MONDO:0044924)","termid":"MONDO:0044924","xrefs":{"Monarch":{"xref_id":"0044924"}}}


id: PBO:0077767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 3","termid":"PBO:0077767"}


id: MONDO:0013476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the CALR3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 19","secondary_identifiers":["OMIM:613875","DOID:0110325"],"synonyms":[{"name":"CALR3 hypertrophic cardiomyopathy","type":"exact"},{"name":"CMH19","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 19","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 19","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 19","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in CALR3","type":"exact"},{"name":"hypertrophic cardiomyopathy type 19","type":"exact"}],"termid":"MONDO:0013476","xrefs":{"Monarch":{"xref_id":"0013476"}}}


id: MONDO:0800385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heavy metal poisoning that is caused by exposure to iron. Iron toxicity is classified as corrosive or cellular. Ingested iron can cause direct caustic injury to the gastrointestinal mucosa, resulting in nausea, vomiting, abdominal pain, and diarrhea.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heavy metal poisoning","termid":"MONDO:0023305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron poisoning","synonyms":[{"name":"iron overload","type":"exact"},{"name":"iron toxicity","type":"exact"}],"termid":"MONDO:0800385","xrefs":{"Monarch":{"xref_id":"0800385"}}}


id: GO:2001299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N(omega),N(omega)-dimethyl-L-arginine, a methyl-L-arginine having two methyl groups both attached to the primary amino moiety of the guanidino group.","definition_xrefs":["GOC:rs","PMID:10510241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"N(omega),N(omega)-dimethyl-L-arginine metabolic process","termid":"GO:2001298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N(omega),N(omega)-dimethyl-L-arginine catabolic process","synonyms":[{"name":"N(omega),N(omega)-dimethyl-L-arginine breakdown","type":"exact"},{"name":"N(omega),N(omega)-dimethyl-L-arginine catabolism","type":"exact"},{"name":"N(omega),N(omega)-dimethyl-L-arginine degradation","type":"exact"}],"termid":"GO:2001299"}


id: PBO:0051451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-39","termid":"PBO:0051451"}


id: GO:1904865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of beta-catenin-TCF complex assembly","termid":"GO:1904863"},{"relation_name":"positively_regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"activation of beta-catenin-TCF complex assembly","type":"narrow"},{"name":"activation of beta-catenin-TCF complex formation","type":"narrow"},{"name":"activation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"activation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"activation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"activation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"activation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"activation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"positive regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"positive regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"positive regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"positive regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"positive regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"positive regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"positive regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"up regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"up regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"up regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"up regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"up regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"up regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"up regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"up regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"up-regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"up-regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"up-regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"up-regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"up-regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"up-regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"up-regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"up-regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"upregulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"upregulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"upregulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"upregulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"upregulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"upregulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"upregulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"upregulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904865"}


id: PBO:0087121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger ubiquitin ligase (E3); subunit of ribosome-associated quality control trigger complex (RQT); involved in ubiquitination and degradation of excess histones; interacts with Ubc4p and Rad53p; required to trigger ribosome-associated quality control (RQC) and canonical no-go decay; ubiquitinates Rps20 and Rps3; binds to ribosomal RNA, mRNA and tRNA","termid":"PBO:0087121"}


id: GO:0080127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fruit septum over time, from its formation to the mature structure. The fruit septum is a thin partition or membrane that divides a cavity or a mass of tissue in the fruit.","definition_xrefs":["PO:0005008","GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"plant septum development","termid":"GO:1905328"},{"relation_name":"part_of","term_name":"fruit development","termid":"GO:0010154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit septum development","termid":"GO:0080127"}


id: PBO:0004488
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates cyc1","termid":"PBO:0004488"}


id: GO:0003188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a heart valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"heart valve morphogenesis","termid":"GO:0003179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve formation","termid":"GO:0003188"}


id: MOD:02002
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with a palmitoleylsulfanyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"palmitoleylated residue","termid":"MOD:01423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"S-palmitoleylated residue","termid":"MOD:02002"}


id: GO:1900303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of laminaritriose transport","termid":"GO:1900303"}


id: MONDO:0011865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A brain disease characterized by autosomal dominant inheritance of fragile small blood vessels in the brain, leukoencephalopathy, increased risk of stroke, seizure and migraine and in some cases Axenfeld-Riegar anomaly that has material basis in heterozygous mutation in the COL4A1 gene on chromosome 13q34.","definition_xrefs":["DOID:0090125"],"gene_count":0,"genotype_count":0,"name":"obsolete COL4A1-related familial vascular leukoencephalopathy (obsolete MONDO:0011865)","termid":"MONDO:0011865","xrefs":{"Monarch":{"xref_id":"0011865"}}}


id: GO:0036259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of raffinose that occur in the presence of oxygen.","definition_xrefs":["PMID:10082789","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose catabolic process","termid":"GO:0034484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"aerobic raffinose catabolic process","synonyms":[{"name":"aerobic raffinose breakdown","type":"exact"},{"name":"aerobic raffinose catabolism","type":"exact"},{"name":"aerobic raffinose degradation","type":"exact"}],"termid":"GO:0036259"}


id: GO:0007075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase III promoter as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis, from RNA polymerase III promoter (obsolete GO:0007075)","synonyms":[{"name":"activation of transcription on exit from mitosis, from Pol III promoter","type":"narrow"},{"name":"activation of transcription on exit from mitosis, from RNA polymerase III promoter","type":"narrow"}],"termid":"GO:0007075"}


id: GO:1905898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to endoplasmic reticulum stress.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:21803450","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"positively_regulates","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to endoplasmic reticulum stress","synonyms":[{"name":"activation of ER stress response","type":"narrow"},{"name":"activation of cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"activation of response to ER stress","type":"narrow"},{"name":"activation of response to endoplasmic reticulum stress","type":"narrow"},{"name":"positive regulation of ER stress response","type":"exact"},{"name":"positive regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"positive regulation of response to ER stress","type":"exact"},{"name":"up regulation of ER stress response","type":"exact"},{"name":"up regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of response to ER stress","type":"exact"},{"name":"up regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of ER stress response","type":"exact"},{"name":"up-regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of response to ER stress","type":"exact"},{"name":"up-regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of ER stress response","type":"exact"},{"name":"upregulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of response to ER stress","type":"exact"},{"name":"upregulation of response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1905898"}


id: PBO:0058804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7846","termid":"PBO:0058804"}


id: PBO:0089116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF2 methyltransferase Efm3","termid":"PBO:0089116"}


id: MONDO:0008618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesomelic dwarfism, Reinhardt-Pfeiffer type is characterized by disproportionate short stature from birth with dysplasia of the ulna and fibula.","definition_xrefs":["Orphanet:2634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"mesomelic dysplasia","termid":"MONDO:0023599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mesomelic dwarfism, Reinhardt-Pfeiffer type","secondary_identifiers":["OMIM:191400","icd11.foundation:1393171517","UMLS:C1860616","GARD:3555","MEDGEN:395935","SCTID:715472000","MESH:C537349"],"synonyms":[{"name":"Reinhardt-Pfeiffer mesomelic dysplasia","type":"exact"},{"name":"Reinhardt-Pfeiffer syndrome","type":"exact"},{"name":"hypoplasia of ulna and fibula","type":"related"},{"name":"mesomelic dwarfism of hypoplastic ulna and fibula type","type":"related"},{"name":"mesomelic dysplasia Reinhardt-Pfeiffer type","type":"related"},{"name":"ulna and fibula, hypoplasia OF","type":"related"}],"termid":"MONDO:0008618","xrefs":{"Monarch":{"xref_id":"0008618"}}}


id: PBO:0028406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell_with_swollen_medial_region","termid":"PBO:0028406"}


id: PBO:0026813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_early_meiotic_gene_mRNA_during_meiotic_cell_cycle","termid":"PBO:0026813"}


id: PBO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-Alpha-Acetyltransferase","termid":"PBO:0002204"}


id: GO:0035138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin morphogenesis","termid":"GO:0033334"},{"relation_name":"part_of","term_name":"pectoral fin development","termid":"GO:0033339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pectoral fin morphogenesis","termid":"GO:0035138"}


id: PBO:0087632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; essential for the integrity and function of EGO; gene exhibits synthetic genetic interaction with MSS4","termid":"PBO:0087632"}


id: PBO:0084249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in the de novo synthesis of GTP; member of a four-gene family in S. cerevisiae, constitutively expressed; IMD3 has a paralog, IMD4, that arose from the whole genome duplication","termid":"PBO:0084249"}


id: PBO:0071071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 73","termid":"PBO:0071071"}


id: MONDO:0018368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian serous adenocarcinoma","termid":"MONDO:0005211"},{"relation_name":"is_a","term_name":"primary peritoneal serous adenocarcinoma","termid":"MONDO:0006386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary peritoneal serous/papillary carcinoma","secondary_identifiers":["GARD:21653","UMLS:C1368918","NCIT:C7695","DOID:6228","MEDGEN:237154","Orphanet:398980"],"synonyms":[{"name":"PPSPC","type":"exact"},{"name":"peritoneal serous papillary adenocarcinoma","type":"exact"},{"name":"primary peritoneal serous papillary adenocarcinoma","type":"exact"},{"name":"primary peritoneal serous papillary carcinoma","type":"exact"},{"name":"primary serous papillary carcinoma of peritoneum","type":"exact"}],"termid":"MONDO:0018368","xrefs":{"Monarch":{"xref_id":"0018368"}}}


id: GO:0010207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a photosystem II complex on the thylakoid membrane. The photosystem II complex consists of at least 20 polypeptides and around 80 cofactors in most organisms.","definition_xrefs":["GOC:aa","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"photosystem II assembly","termid":"GO:0010207"}


id: MONDO:0014053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete stomatin-like protein-2, hyperphosphorylation of (obsolete MONDO:0014053)","secondary_identifiers":["OMIM:615121"],"synonyms":[{"name":"hyperphosphorylated Paratarg-7","type":"related"},{"name":"stomatin-like protein-2, hyperphosphorylation of","type":"exact"}],"termid":"MONDO:0014053","xrefs":{"Monarch":{"xref_id":"0014053"}}}


id: PBO:0112906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-X, glycosylphosphatidylinositol-mannosyltransferase I complex subunit pig-X","termid":"PBO:0112906"}


id: PBO:0061597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUAK family kinase 1","termid":"PBO:0061597"}


id: PBO:0075307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 4","termid":"PBO:0075307"}


id: PBO:0076207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 17","termid":"PBO:0076207"}


id: PBO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bet1 (predicted)","termid":"PBO:0000747"}


id: PR:000050513
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein rec8 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-412 of the amino acid sequence represented by UniProtKB:P36626. Example: UniProtKB:P36626, Ser-412, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:33888556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","termid":"PR:000050510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rec8/Phos(S412)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"PomBase_original_PRO_term_name: meiotic recombination protein rec8 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rec8/Phos:3","type":"exact"},{"name":"UniProtKB:P36626, Ser-412, MOD:00046","type":"narrow"},{"name":"rec8/Phos(S412)","type":"exact"}],"termid":"PR:000050513"}


id: MONDO:0000615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"progesterone-receptor positive breast cancer","secondary_identifiers":["DOID:0060077","MEDGEN:1843473","UMLS:C4733094"],"termid":"MONDO:0000615","xrefs":{"Monarch":{"xref_id":"0000615"}}}


id: PBO:0049364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 23","termid":"PBO:0049364"}


id: PBO:0004686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein Git1","termid":"PBO:0004686"}


id: MONDO:0859378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 25","secondary_identifiers":["OMIM:620243","DOID:0070401","UMLS:C5830275","MEDGEN:1840911"],"termid":"MONDO:0859378","xrefs":{"Monarch":{"xref_id":"0859378"}}}


id: PBO:0091068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ermes regulator Emr1","termid":"PBO:0091068"}


id: GO:0033440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"ACG codon-amino acid adaptor activity","synonyms":[{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033440"}


id: GO:0005569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar RNA (obsolete GO:0005569)","synonyms":[{"name":"small nucleolar RNA","type":"exact"}],"termid":"GO:0005569"}


id: MONDO:0032831
data:
  {"annotated_genes":["SJAG_01645"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87269],"is_not":false,"summary":null,"term":"MONDO:0032831"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18031","MEDGEN:1684708","Orphanet:613267","DOID:0112332","OMIM:618606","UMLS:C5231425"],"synonyms":[{"name":"PCH13","type":"exact"},{"name":"PONTOCEREBELLAR HYPOPLASIA, TYPE 13","type":"exact"}],"termid":"MONDO:0032831","terms_by_termid":{"MONDO:0032831":null},"xrefs":{"Monarch":{"xref_id":"0032831"}}}


id: PBO:0028310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_methylglyoxal","termid":"PBO:0028310"}


id: MONDO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectropion","termid":"MONDO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"spastic ectropion","secondary_identifiers":["MEDGEN:509843","ICD9:374.13","SCTID:80846000","UMLS:C0155195","DOID:1571"],"termid":"MONDO:0002044","xrefs":{"Monarch":{"xref_id":"0002044"}}}


id: GO:0032244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"positively_regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of nucleoside transport","synonyms":[{"name":"activation of nucleoside transport","type":"narrow"},{"name":"stimulation of nucleoside transport","type":"narrow"},{"name":"up regulation of nucleoside transport","type":"exact"},{"name":"up-regulation of nucleoside transport","type":"exact"},{"name":"upregulation of nucleoside transport","type":"exact"}],"termid":"GO:0032244"}


id: FYPO:0006639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal diameter (thickness; width).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal vegetative cell diameter","synonyms":[{"name":"normal cell diameter during vegetative growth","type":"exact"},{"name":"normal vegetative cell diameter during mitotic cell cycle","type":"related"},{"name":"normal vegetative cell thickness","type":"exact"},{"name":"normal vegetative cell width","type":"exact"}],"termid":"FYPO:0006639"}


id: GO:0061850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of the growth cone which represents the distal part of the structure.","definition_xrefs":["PMID:10797548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell leading edge","termid":"GO:0031252"},{"relation_name":"part_of","term_name":"peripheral region of growth cone","termid":"GO:0090725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone leading edge","termid":"GO:0061850"}


id: MONDO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pupil disorder","termid":"MONDO:0002285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"abnormal pupillary function","secondary_identifiers":["UMLS:C0917967","DOID:11518","SCTID:72124005","MEDGEN:214629","ICD9:379.40","HP:0007686","ICD9:379.49"],"synonyms":[{"name":"abnormal pupillary function","type":"exact"},{"name":"abnormal pupillary function (disease)","type":"exact"}],"termid":"MONDO:0001303","xrefs":{"Monarch":{"xref_id":"0001303"}}}


id: PBO:0075872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL1 divergent transcript","termid":"PBO:0075872"}


id: GO:0062032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cichorine, a secondary metabolite found in some species of fungi.","definition_xrefs":["PMID:24244835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"cichorine biosynthetic process","synonyms":[{"name":"cichorine anabolism","type":"exact"},{"name":"cichorine biosynthesis","type":"exact"},{"name":"cichorine formation","type":"exact"},{"name":"cichorine synthesis","type":"exact"}],"termid":"GO:0062032"}


id: GO:1904728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:TermGenie","GOC:rph","PMID:23496142","GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"positively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of replicative senescence","synonyms":[{"name":"activation of replicative senescence","type":"narrow"},{"name":"up regulation of replicative senescence","type":"exact"},{"name":"up-regulation of replicative senescence","type":"exact"},{"name":"upregulation of replicative senescence","type":"exact"}],"termid":"GO:1904728"}


id: GO:0009578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of an etioplast but excluding the prothylakoid space. It contains the etioplast DNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"etioplast stroma","termid":"GO:0009578"}


id: SO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby two genes, on alternate strands have become joined.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_fusion","termid":"SO:0001565"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_gene_fusion","synonyms":[{"name":"bidirectional gene fusion","type":"exact"}],"termid":"SO:0002086"}


id: MONDO:0010688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by X-linked inheritance of slowly progressing neuropathy with onset in the first or second decade of life.","definition_xrefs":["DOID:0070159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory neuropathy X-linked","secondary_identifiers":["MESH:C564090","OMIM:310470","MEDGEN:333359","UMLS:C1839602"],"synonyms":[{"name":"neuropathy, hereditary sensory, X-linked","type":"related"}],"termid":"MONDO:0010688","xrefs":{"Monarch":{"xref_id":"0010688"}}}


id: GO:0008583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an undifferentiated cell acquires the features of a mystery cell. The mystery cells are a precluster of cells that emerge from the compound eye morphogenetic furrow, normally positioned between R3 and R4. They then disappear into the surrounding pool of undifferentiated cells and have no known fate in the mature ommatidium. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:1295747","ISBN:0632030488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mystery cell differentiation","termid":"GO:0008583"}


id: PBO:0071619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 37","termid":"PBO:0071619"}


id: PR:000044738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at position 2 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PMID:28367989","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 5 (Schizosaccharomyces pombe)","type":"exact"},{"name":"S2P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:5","type":"exact"},{"name":"rpb1/Phos(CTD-S2)","type":"exact"}],"termid":"PR:000044738"}


id: GO:0097677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the signal transducers and activators of transcription (STAT) protein family. STATs are, as the name indicates, both signal transducers and transcription factors. STATs are activated by cytokines and some growth factors and thus control important biological processes including cell growth, cell differentiation, apoptosis and immune responses.","definition_xrefs":["GOC:mr","InterPro:IPR001217","PMID:21447371","PMID:24470978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"STAT family protein binding","synonyms":[{"name":"signal transducers and activators of transcription family protein binding","type":"exact"}],"termid":"GO:0097677"}


id: PBO:0052398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRT19 interacting long noncoding RNA in hepatocellular carcinoma","termid":"PBO:0052398"}


id: PBO:0004544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein Thp1-Sac3 complex subunit (predicted)","termid":"PBO:0004544"}


id: GO:1905782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["PMID:17401362","GO_REF:0000058","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid translocation","termid":"GO:0061092"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine exposure on apoptotic cell surface","termid":"GO:1905780"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"activation of externalization of phosphatidylserine","type":"narrow"},{"name":"activation of phosphatidylserine exposure on apoptotic cell surface","type":"narrow"},{"name":"positive regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"up-regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up-regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"upregulation of externalization of phosphatidylserine","type":"exact"},{"name":"upregulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"}],"termid":"GO:1905782"}


id: PBO:0049561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 27, pseudogene","termid":"PBO:0049561"}


id: PBO:0053469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 433","termid":"PBO:0053469"}


id: PBO:0001915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic phenylalanine-tRNA ligase alpha subunit Frs2 (predicted)","termid":"PBO:0001915"}


id: PBO:0057943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3667 host gene","termid":"PBO:0057943"}


id: PBO:0073971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 20, pseudogene","termid":"PBO:0073971"}


id: PBO:0053039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 1B","termid":"PBO:0053039"}


id: SO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide region with either intra-genome or intracellular mobility, of varying length, which often carry the information necessary for transfer and recombination with the host genome.","definition_xrefs":["PMID:14681355"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"mobile","termid":"SO:0001234"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_genetic_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Mobile_genetic_element"],"synonyms":[{"name":"INSDC_feature:mobile_element","type":"exact"},{"name":"MGE","type":"exact"},{"name":"mobile genetic element","type":"exact"}],"termid":"SO:0001037"}


id: FYPO:0003209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to cell tip, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to cell tip, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to cell end, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cell tip, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cell tip, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to cell tip abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003209"}


id: GO:2000028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photoperiodism, flowering.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"photoperiodism, flowering","termid":"GO:0048573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photoperiodism, flowering","synonyms":[{"name":"regulation of photoperiodic control of flowering time","type":"exact"},{"name":"regulation of photoperiodic control of inflorescence development","type":"exact"},{"name":"regulation of response to day length, flowering","type":"exact"},{"name":"regulation of response to night length, flowering","type":"exact"},{"name":"regulation of response to photoperiod, flowering","type":"exact"}],"termid":"GO:2000028"}


id: PBO:0040850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 4","termid":"PBO:0040850"}


id: PBO:0085176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-methyltransferase; catalyzes two different O-methylation steps in ubiquinone (Coenzyme Q) biosynthesis; component of a mitochondrial ubiquinone-synthesizing complex; phosphoprotein","termid":"PBO:0085176"}


id: PBO:0063285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 11","termid":"PBO:0063285"}


id: PBO:0053619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 661","termid":"PBO:0053619"}


id: PBO:0013441
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatic mRNAs transcribed in cid14delta are not translated","termid":"PBO:0013441"}


id: PBO:0048852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNRHR2 pseudogene 1","termid":"PBO:0048852"}


id: PBO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated ubiquitin-like modifier Atg12","termid":"PBO:0001409"}


id: PBO:0005123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set1","termid":"PBO:0005123"}


id: FYPO:0008274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which glutamate biosynthesis is abnormal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased glutamate biosynthesis","termid":"FYPO:0008274"}


id: PBO:0088442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetohydroxyacid reductoisomerase","termid":"PBO:0088442"}


id: MONDO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000821 (obsolete MONDO:0000821)","termid":"MONDO:0000821","xrefs":{"Monarch":{"xref_id":"0000821"}}}


id: PBO:0067105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 147, pseudogene","termid":"PBO:0067105"}


id: PBO:0051916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1 pseudogene 1","termid":"PBO:0051916"}


id: PBO:0042541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8","termid":"PBO:0042541"}


id: PR:Q10445
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp41 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.12c","synonyms":[{"name":"Spom972h-rhp41","type":"exact"}],"termid":"PR:Q10445"}


id: MONDO:0021117
data:
  {"annotated_genes":["SJAG_03453","SJAG_03689","SJAG_04114","SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87129,87661,87130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[86675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm involving the lungs. Representative examples of benign neoplasms include adenoma, papilloma, chondroma, and endobronchial lipoma. Representative examples of malignant neoplasms include carcinoma, carcinoid tumor, sarcoma, and lymphoma.","definition_xrefs":["NCIT:C3200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_04114":null},"genotype_count":0,"is_obsolete":false,"name":"lung neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:7400","MESH:D008175","ONCOTREE:LUNG","UMLS:C0024121"],"synonyms":[{"name":"lung","type":"related"},{"name":"lung neoplasm","type":"exact"},{"name":"lung neoplasm (disease)","type":"exact"},{"name":"lung neoplasms","type":"exact"},{"name":"lung tumor","type":"exact"},{"name":"lung tumour","type":"exact"},{"name":"neoplasm of lung","type":"exact"},{"name":"neoplasm of the lung","type":"exact"},{"name":"neoplasm, lung","type":"related"},{"name":"neoplasm, pulmonary","type":"related"},{"name":"neoplasms, lung","type":"related"},{"name":"neoplasms, pulmonary","type":"related"},{"name":"tumor of lung","type":"exact"},{"name":"tumor of the lung","type":"exact"},{"name":"tumour of lung","type":"exact"},{"name":"tumour of the lung","type":"exact"}],"termid":"MONDO:0021117","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0021117"}}}


id: GO:0070175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of enamel mineralization, the deposition of calcium salts in tooth enamel.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tooth mineralization","termid":"GO:0070172"},{"relation_name":"is_a","term_name":"regulation of enamel mineralization","termid":"GO:0070173"},{"relation_name":"positively_regulates","term_name":"enamel mineralization","termid":"GO:0070166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of enamel mineralization","termid":"GO:0070175"}


id: GO:0070419
data:
  {"annotated_genes":["SJAG_02527","SJAG_04199","SJAG_02237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100262,116651,80418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032807"}]},"cv_name":"cellular_component","definition":"A protein complex that plays a role in DNA double-strand break repair via nonhomologous end joining. Such complexes typically contain a specialized DNA ligase (e.g. Lig4 in eukaryotes) and one or more proteins that bind to DNA ends.","definition_xrefs":["PMID:17072889","GOC:mah","PMID:17938628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02237":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nonhomologous end joining complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NHEJ complex","type":"exact"},{"name":"non-homologous end joining complex","type":"exact"}],"termid":"GO:0070419","terms_by_termid":{"GO:0032807":null}}


id: MOD:00510
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex HexNAc","definition_xrefs":["PubMed:111247","Unimod:142","PubMed:1694179","RESID:AA0151#var","PubMed:5490222","OMSSA:183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc1dHex1 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(1)dHex(1)","type":"related"},{"name":"HexNAc1dHex1","type":"related"},{"name":"dHexHexNAcN","type":"exact"}],"termid":"MOD:00510"}


id: GO:0004918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-8 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-X-C chemokine receptor activity","termid":"GO:0016494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-8 receptor activity","synonyms":[{"name":"IL-8 receptor activity","type":"exact"},{"name":"IL-8R","type":"exact"}],"termid":"GO:0004918"}


id: PBO:0065292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired related homeobox 2","termid":"PBO:0065292"}


id: GO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process involved in cell fate commitment that occurs after cell fate specification, in which a cell is irreversibly committed to a cellular developmental fate which is heritable on cell division.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate determination","secondary_identifiers":["Wikipedia:Cell_fate_determination"],"termid":"GO:0001709"}


id: PBO:0078085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 2","termid":"PBO:0078085"}


id: PBO:0017759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase involved in NADPH regeneration (predicted)","termid":"PBO:0017759"}


id: PBO:0018171
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0018171"}


id: PR:O14340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2F12.05c gene.","definition_xrefs":["UniProtKB:O14340","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein homolog C2F12.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.05c","synonyms":[{"name":"Spom972h-SPBC2F12.05c","type":"exact"}],"termid":"PR:O14340"}


id: PBO:0044035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 4 Y-linked","termid":"PBO:0044035"}


id: FYPO:0002867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of orotidine 5'-phosphate (orotidine monophosphate; OMP) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular OMP level","synonyms":[{"name":"increased OMP accumulation","type":"related"},{"name":"increased cellular OMP level during mitotic cell cycle","type":"related"},{"name":"increased cellular OMP level during vegetative growth","type":"exact"},{"name":"increased cellular orotidine 5'-(dihydrogen phosphate) level","type":"exact"},{"name":"increased cellular orotidine monophosphate level","type":"exact"}],"termid":"FYPO:0002867"}


id: MONDO:0023230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ghose-Sachdev-Kumar syndrome","secondary_identifiers":["UMLS:C2974016","MEDGEN:425476","MESH:C537803"],"synonyms":[{"name":"bilateral nanophthalmos, pigmentary retinal dystrophy, and angle closure glaucoma","type":"related"}],"termid":"MONDO:0023230","xrefs":{"Monarch":{"xref_id":"0023230"}}}


id: GO:0046926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The post-translational cross-linking of a cysteine residue to an L-threonine residue to form 2-(S-L-cysteinyl)-D-allo-threonine.","definition_xrefs":["PMID:36302388","PMID:12696888","RESID:AA0342"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-(S-L-cysteinyl)-D-allo-threonine (obsolete GO:0046926)","termid":"GO:0046926"}


id: GO:0052772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of brefeldin A to produce brefeldin A acid. Brefeldin A is also known as gamma,4-dihydroxy-2-(6-hydroxy-1-heptenyl)-4-cyclopentanecrotonic acid lambda-lactone.","definition_xrefs":["PMID:10201402","GOC:mengo_curators","PMID:8106385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"brefeldin A esterase activity","synonyms":[{"name":"BFA esterase activity","type":"broad"},{"name":"brefeldin A hydrolase activity","type":"exact"}],"termid":"GO:0052772"}


id: GO:1900493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:pr","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [4Fe-4S] cluster assembly","termid":"GO:1900491"},{"relation_name":"is_a","term_name":"positive regulation of iron-sulfur cluster assembly","termid":"GO:1903331"},{"relation_name":"positively_regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"activation of 4Fe-4S cluster assembly","type":"narrow"},{"name":"activation of [4Fe-4S] cluster assembly","type":"narrow"},{"name":"activation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"positive regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"positive regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"up regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"up regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"up regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"up-regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"up-regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"up-regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"upregulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"upregulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"upregulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900493"}


id: MONDO:0002153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A scalp hair loss condition characterized by excessive shedding of hair in the resting phase of growth, usually following a fever or major body stress.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telogen effluvium","secondary_identifiers":["ICD10CM:L65.0","NCIT:C112200","icd11.foundation:1188535025","SCTID:39479004","ICD9:704.02","DOID:1943","UMLS:C0263518","MEDGEN:537938"],"termid":"MONDO:0002153","xrefs":{"Monarch":{"xref_id":"0002153"}}}


id: PBO:0089324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (Nem1-Spo7 complex) catalytic subunit Nem1","termid":"PBO:0089324"}


id: PBO:0076990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 6","termid":"PBO:0076990"}


id: FYPO:0008141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the second meiotic nuclear division. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:16272747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during meiosis II","synonyms":[{"name":"decreased RNA accumulation during meiosis II","type":"related"},{"name":"decreased RNA level during second meiotic nuclear division","type":"exact"},{"name":"decreased transcript level during meiosis II","type":"exact"},{"name":"reduced RNA level during meiosis II","type":"exact"}],"termid":"FYPO:0008141"}


id: PBO:0076434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 10","termid":"PBO:0076434"}


id: GO:0160114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure which joins the B1 protofilament of the B tubule to the A10 and A11 protofilaments of the A tubule within an axonemal microtubule doublet.","definition_xrefs":["PMID:37295417","GOC:krc","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal microtubule doublet outer junction","termid":"GO:0160114"}


id: MONDO:0005906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess that develops in the space surrounding one or both palatine tonsils.","definition_xrefs":["NCIT:C128322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"lymphoid system disorder","termid":"MONDO:0044986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"peritonsillar abscess","secondary_identifiers":["ICD9:475","MESH:D000039","icd11.foundation:1782446047","UMLS:C0031157","SCTID:15033003","ICD10CM:J36","MEDGEN:45819","EFO:0007429"],"synonyms":[{"name":"quinsy","type":"exact"}],"termid":"MONDO:0005906","xrefs":{"Monarch":{"xref_id":"0005906"}}}


id: MOD:01596
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-115 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01596"}


id: PBO:0080890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein F1","termid":"PBO:0080890"}


id: PATO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000372 absolute distance value (obsolete PATO:0000372)","termid":"PATO:0000372"}


id: MONDO:0019639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital megacalycosis is a rare renal malformation, characterized by non-obstructive dilation of the renal calyces as well as an increased calyceal number (12-20), with a normal renal pelvis, ureter, and bladder. It may be unilateral or bilateral and is usually asymptomatic unless complicated by nephrolithiasis and urinary tract infection.","definition_xrefs":["Orphanet:93109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital megacalycosis","secondary_identifiers":["UMLS:C5545379","SCTID:85901000","ICD9:753.3","GARD:19174","MEDGEN:1782490","icd11.foundation:954627950","NANDO:2200177"],"termid":"MONDO:0019639","xrefs":{"Monarch":{"xref_id":"0019639"}}}


id: MONDO:0020096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of isolated diffuse palmoplantar keratoderma.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive isolated diffuse palmoplantar keratoderma (obsolete MONDO:0020096)","secondary_identifiers":["Orphanet:98356"],"synonyms":[{"name":"autosomal recessive isolated diffuse palmoplantar hyperkeratosis","type":"exact"},{"name":"isolated diffuse palmoplantar keratoderma, autosomal recessive","type":"exact"}],"termid":"MONDO:0020096","xrefs":{"Monarch":{"xref_id":"0020096"}}}


id: SO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that codes for a 2A self-cleaving polypeptide region, which is a region that can result in a break in the peptide sequence at its terminal G-P junction.","definition_xrefs":["PMID:22301656","PMID:28526819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"2A_self_cleaving_peptide_region","synonyms":[{"name":"2A polypeptide region","type":"related"},{"name":"2A self-cleaving polypeptide region","type":"related"}],"termid":"SO:0002224"}


id: GO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a plasmacytoid dendritic cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell cytokine production","termid":"GO:0002371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"plasmacytoid dendritic cell cytokine production","termid":"GO:0002373"}


id: PBO:0063523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDYN antisense RNA 1","termid":"PBO:0063523"}


id: MONDO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete food allergy (obsolete MONDO:0002497)","termid":"MONDO:0002497","xrefs":{"Monarch":{"xref_id":"0002497"}}}


id: PR:O14278
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug129 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 129 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.09c","synonyms":[{"name":"Spom972h-mug129","type":"exact"}],"termid":"PR:O14278"}


id: FYPO:0006388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which meiotic spindle pole body organization is abnormal during the first meiotic nuclear division. Meiotic spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the meiotic spindle pole body (SPB).","definition_xrefs":["GO:1990395","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic spindle pole body organization during meiosis I","synonyms":[{"name":"abnormal meiotic SPB organization during meiosis I","type":"exact"},{"name":"abnormal meiotic spindle pole body organisation during meiosis I","type":"exact"},{"name":"abnormal spindle pole body organization during meiosis I","type":"exact"}],"termid":"FYPO:0006388"}


id: MONDO:0006895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant neoplasm that affects the penis. Representative examples include penile hemangioma, penile intraepithelial neoplasia, and penile carcinoma.","definition_xrefs":["NCIT:C3317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penile disorder","termid":"MONDO:0002036"},{"relation_name":"is_a","term_name":"male reproductive system neoplasm","termid":"MONDO:0024582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penile neoplasm","secondary_identifiers":["MESH:D010412","ONCOTREE:PENIS","MedDRA:10061913","SCTID:126896003","ICD9:239.5","DOID:11624","MEDGEN:14656","UMLS:C0030849","EFO:1001094"],"synonyms":[{"name":"neoplasm of penis","type":"exact"},{"name":"neoplasm of the penis","type":"exact"},{"name":"penile neoplasm","type":"exact"},{"name":"penile neoplasms","type":"exact"},{"name":"penile tumor","type":"exact"},{"name":"penile tumour","type":"exact"},{"name":"penis neoplasm","type":"exact"},{"name":"penis neoplasm (disease)","type":"exact"},{"name":"penis tumor","type":"exact"},{"name":"penis tumour","type":"exact"},{"name":"tumor of penis","type":"exact"},{"name":"tumor of the penis","type":"exact"},{"name":"tumour of penis","type":"exact"},{"name":"tumour of the penis","type":"exact"}],"termid":"MONDO:0006895","xrefs":{"Monarch":{"xref_id":"0006895"}}}


id: PBO:0067725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 23","termid":"PBO:0067725"}


id: PBO:0000649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I and III subunit Rpc19","termid":"PBO:0000649"}


id: PBO:0028768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_nuclear_polyadenylated_mRNA_level_during_vegetative_growth","termid":"PBO:0028768"}


id: PBO:0083872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein of unknown function; predicted to be part of an SCF ubiquitin protease complex; involved in regulating protein levels of sulfur metabolism enzymes; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0083872"}


id: PBO:0082574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase II; catalyzes transfer of N-acetylglucosamine (GlcNAc) to chitin upon activation of zymogenic form; required for chitin synthesis in the primary septum during cytokinesis; localization regulated by Cdk1p during mitosis; phosphorylation by Dbf2p kinase regulates its dynamics and chitin synthesis during cytokinesis","termid":"PBO:0082574"}


id: PBO:0053181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lens epithelial protein","termid":"PBO:0053181"}


id: GO:0140881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of the fungal metabolite terrein.","definition_xrefs":["PMID:25852654","PMID:24816227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"terrein biosynthetic process","termid":"GO:0140880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation terrein biosynthetic process","termid":"GO:0140881"}


id: PBO:0081767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 699","termid":"PBO:0081767"}


id: MONDO:0042915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schmitt-Gillenwater-Kelly syndrome (obsolete MONDO:0042915)","termid":"MONDO:0042915","xrefs":{"Monarch":{"xref_id":"0042915"}}}


id: GO:2000214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of proline metabolic process","synonyms":[{"name":"regulation of proline metabolism","type":"exact"}],"termid":"GO:2000214"}


id: PBO:0051730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 3","termid":"PBO:0051730"}


id: GO:0002858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002855"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"}


id: GO:0035421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in innate immune response (obsolete GO:0035421)","termid":"GO:0035421"}


id: GO:1903838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["PMID:19575011","GOC:TermGenie","GO_REF:0000059","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA 3'-UTR binding (obsolete GO:1903838)","synonyms":[{"name":"down regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"downregulation of mRNA 3' UTR binding","type":"exact"},{"name":"downregulation of mRNA 3'-UTR binding","type":"exact"},{"name":"inhibition of mRNA 3' UTR binding","type":"narrow"},{"name":"inhibition of mRNA 3'-UTR binding","type":"narrow"},{"name":"negative regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903838"}


id: MONDO:0024459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"Aeromonas hydrophila infectious disease","termid":"MONDO:0005117"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Aeromonas hydrophila intestinal disease","secondary_identifiers":["SCTID:446988001","ICD9:008.47","UMLS:C2960005","MEDGEN:755174"],"synonyms":[{"name":"intestinal infection caused by Aeromonas hydrophila","type":"exact"},{"name":"intestinal infection due to Aeromonas hydrophila","type":"exact"}],"termid":"MONDO:0024459","xrefs":{"Monarch":{"xref_id":"0024459"}}}


id: PBO:0035953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K8_acetylation_during_vegetative_growth","termid":"PBO:0035953"}


id: FYPO:0000735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short spindle","termid":"FYPO:0000130"},{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0000054","FYPO:0000120","FYPO:0005447"],"is_obsolete":false,"name":"short meiotic spindle","synonyms":[{"name":"decreased meiotic spindle length","type":"exact"},{"name":"short meiotic spindles","type":"exact"},{"name":"short spindle during meiosis","type":"exact"}],"termid":"FYPO:0000735"}


id: GO:1901063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guaiacyl lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin biosynthetic process","termid":"GO:0009809"},{"relation_name":"is_a","term_name":"guaiacyl lignin metabolic process","termid":"GO:1901061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"guaiacyl lignin biosynthetic process","synonyms":[{"name":"G-lignin biosynthetic process","type":"exact"},{"name":"guaiacyl lignin anabolism","type":"exact"},{"name":"guaiacyl lignin biosynthesis","type":"exact"},{"name":"guaiacyl lignin formation","type":"exact"},{"name":"guaiacyl lignin synthesis","type":"exact"}],"termid":"GO:1901063"}


id: MONDO:0004626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Hodgkin's paragranuloma (obsolete MONDO:0004626)","secondary_identifiers":["DOID:8642","NCIT:C26956"],"synonyms":[{"name":"Hodgkin paragranuloma","type":"exact"}],"termid":"MONDO:0004626","xrefs":{"Monarch":{"xref_id":"0004626"}}}


id: PBO:0046639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 20","termid":"PBO:0046639"}


id: FYPO:0001835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium that is more acidic than standard fission yeast media (about 5.8).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on acidic medium","synonyms":[{"name":"normal cell population growth on acidic medium","type":"exact"},{"name":"normal cellular response to acidity","type":"related"},{"name":"normal vegetative cell population growth on acidic medium","type":"exact"}],"termid":"FYPO:0001835"}


id: PBO:0082508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of protein phosphatase 2A, PP2A; functionally redundant with Pph22p; C-terminally methylated; forms alternate complexes with several regulatory subunits; involved in signal transduction and regulation of mitosis; forms nuclear foci upon DNA replication stress; PPH21 has a paralog, PPH22, that arose from the whole genome duplication","termid":"PBO:0082508"}


id: PBO:0042856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 70","termid":"PBO:0042856"}


id: PBO:0054322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1714","termid":"PBO:0054322"}


id: PR:Q9UT92
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC323.07c gene.","definition_xrefs":["UniProtKB:Q9UT92","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C323.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.07c","synonyms":[{"name":"Spom972h-SPAC323.07c","type":"exact"}],"termid":"PR:Q9UT92"}


id: GO:0036502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing, in mammals, Derlin-1 and VCP-interacting membrane protein (VIMP). The complex links the p97/VCP-containing ATPase complex with Derlin-1 during translocation of protein substrates from the endoplasmic reticulum to the cytosol for degradation by the cytosolic proteasome.","definition_xrefs":["GOC:PARL","PMID:16186510","PMID:15215856","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783","GO:0032991","GO:0005789"],"is_obsolete":false,"name":"Derlin-1-VIMP complex","synonyms":[{"name":"Derlin-1/VIMP complex","type":"exact"}],"termid":"GO:0036502"}


id: PBO:0077851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1 pseudogene 2","termid":"PBO:0077851"}


id: MOD:00137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue into L-3-phenyllactic acid.","definition_xrefs":["RESID:AA0128","Unimod:7#F","PubMed:1973541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-phenyllactic acid","synonyms":[{"name":"(2S)-2-hydroxy-3-phenylpropanoic acid","type":"exact"},{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"L-3-phenyllactic acid","type":"exact"},{"name":"MOD_RES 3-phenyllactic acid","type":"exact"}],"termid":"MOD:00137"}


id: PBO:0081238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 7","termid":"PBO:0081238"}


id: PBO:0068627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 7, pseudogene","termid":"PBO:0068627"}


id: PBO:0004289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Yml6 (predicted)","termid":"PBO:0004289"}


id: PBO:0045867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2","termid":"PBO:0045867"}


id: GO:1903908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plasma membrane raft polarization.","definition_xrefs":["PMID:23575248","GOC:als","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of plasma membrane raft polarization","termid":"GO:1903906"},{"relation_name":"positively_regulates","term_name":"plasma membrane raft polarization","termid":"GO:0044858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of plasma membrane raft polarization","synonyms":[{"name":"activation of plasma membrane raft polarization","type":"narrow"},{"name":"up regulation of plasma membrane raft polarization","type":"exact"},{"name":"up-regulation of plasma membrane raft polarization","type":"exact"},{"name":"upregulation of plasma membrane raft polarization","type":"exact"}],"termid":"GO:1903908"}


id: PBO:0049876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular carcinoma ferroptosis associative lncRNA","termid":"PBO:0049876"}


id: MONDO:0016174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paraneoplastic sensory ganglionopathy (obsolete MONDO:0016174)","secondary_identifiers":["Orphanet:208999"],"synonyms":[{"name":"paraneoplastic sensory neuronopathy","type":"exact"}],"termid":"MONDO:0016174","xrefs":{"Monarch":{"xref_id":"0016174"}}}


id: PBO:0082639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glutamine amidotransferase (GATase II); forms a complex with Dug3p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p)","termid":"PBO:0082639"}


id: PBO:0000992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tf2-type transposon","termid":"PBO:0000992"}


id: PBO:0039680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family A member 1","termid":"PBO:0039680"}


id: FYPO:0001955
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001956"},{"annotations":[119470,119438,119444,119433],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03453":null,"SJAG_04703":null},"genotype_count":5,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"spheroid cell","references_by_uniquename":{"PMID:29566183":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02819","SJAG_00514","SJAG_04703","SJAG_01794","SJAG_03453"],"single_locus_genotype_uniquenames":["scd1delta","scd2delta","for3delta","ras1delta","efc25delta"],"synonyms":[{"name":"cell morphology, round cells","type":"related"},{"name":"cell morphology, rounded cells","type":"related"},{"name":"rounded cell","type":"exact"}],"termid":"FYPO:0001955","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001956":null,"FYPO:0002380":null}}


id: PBO:0049365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 1","termid":"PBO:0049365"}


id: PR:Q9URT2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tho1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URT2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P25A2.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP25A2.03","synonyms":[{"name":"Spom972h-tho1","type":"exact"}],"termid":"PR:Q9URT2"}


id: MONDO:0012504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly-tall stature-scoliosis-hearing loss syndrome is characterized by camptodactyly, tall stature, scoliosis, and hearing loss (CATSHL). It has been described in around 30 individuals from seven generations of the same family. The syndrome is caused by a missense mutation in the FGFR3 gene, leading to a partial loss of function of the encoded protein, which is a negative regulator of bone growth.","definition_xrefs":["Orphanet:85164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal genetic disease","termid":"MONDO:0000429"},{"relation_name":"is_a","term_name":"FGFR3-related chondrodysplasia","termid":"MONDO:0019685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly-tall stature-scoliosis-hearing loss syndrome","secondary_identifiers":["GARD:10012","MESH:C537975","UMLS:C1864852","DOID:0111160","OMIM:610474","MEDGEN:355844"],"synonyms":[{"name":"CATSHL syndrome","type":"exact"},{"name":"CATSHLS","type":"related"},{"name":"camptodactyly, tall stature, and hearing loss syndrome","type":"related"}],"termid":"MONDO:0012504","xrefs":{"Monarch":{"xref_id":"0012504"}}}


id: MONDO:0009888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney, cataract, and congenital blindness","secondary_identifiers":["MESH:C564882","UMLS:C1849771","MEDGEN:337910","OMIM:263100"],"synonyms":[{"name":"polycystic kidney, cataract, and congenital blindness","type":"exact"}],"termid":"MONDO:0009888","xrefs":{"Monarch":{"xref_id":"0009888"}}}


id: PBO:0053581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 604","termid":"PBO:0053581"}


id: PBO:0071655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 19","termid":"PBO:0071655"}


id: PBO:0072364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 50","termid":"PBO:0072364"}


id: PR:O94417
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf26 gene.","definition_xrefs":["UniProtKB:O94417","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.10","synonyms":[{"name":"Spom972h-cwf26","type":"exact"},{"name":"complexed with cdc5 protein 26 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94417"}


id: PBO:0028710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0028710"}


id: GO:0060400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the growth hormone receptor signaling pathway. The growth hormone receptor signaling pathway is the series of molecular signals generated as a consequence of growth hormone receptor binding to its physiological ligand.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of growth hormone receptor signaling pathway","termid":"GO:0060398"},{"relation_name":"negatively_regulates","term_name":"growth hormone receptor signaling pathway","termid":"GO:0060396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of growth hormone receptor signaling pathway","synonyms":[{"name":"negative regulation of growth hormone receptor signalling pathway","type":"exact"}],"termid":"GO:0060400"}


id: GO:0070871
data:
  {"annotated_genes":["SJAG_05001","SJAG_03646","SJAG_01888","SJAG_01171","SJAG_02718","SJAG_03444","SJAG_01017","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102265,89417,88598,94345,100473,108388,102266,111645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"}]},"cv_name":"biological_process","definition":"A process of cell wall organization that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02718":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0000747","GO:0071554"],"is_obsolete":false,"name":"cell wall organization involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall organisation involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0070871","terms_by_termid":{"GO:1904541":null}}


id: PR:O42927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16C6.03c gene.","definition_xrefs":["UniProtKB:O42927","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C6.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.03c","synonyms":[{"name":"Spom972h-SPBC16C6.03c","type":"exact"}],"termid":"PR:O42927"}


id: PBO:0003477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation termination factor Rrf1","termid":"PBO:0003477"}


id: PBO:0076547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 1 pseudogene 1","termid":"PBO:0076547"}


id: PBO:0079608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 G2","termid":"PBO:0079608"}


id: PBO:0082197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoicase; converts allantoate to urea and ureidoglycolate in the second step of allantoin degradation; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0082197"}


id: GO:0097068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus.","definition_xrefs":["GOC:sjw","PMID:9916872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to thyroid hormone","termid":"GO:0097066"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"},{"relation_name":"is_a","term_name":"response to L-phenylalanine derivative","termid":"GO:1904386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thyroxine","synonyms":[{"name":"response to T4","type":"exact"},{"name":"response to T4 stimulus","type":"exact"},{"name":"response to thyroxine stimulus","type":"exact"}],"termid":"GO:0097068"}


id: PBO:0089859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase Hem14","termid":"PBO:0089859"}


id: PBO:0079172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 1","termid":"PBO:0079172"}


id: PBO:0042067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 137","termid":"PBO:0042067"}


id: GO:0043974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 27 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 acetylation (obsolete GO:0043974)","synonyms":[{"name":"histone H3 acetylation at K27","type":"exact"},{"name":"histone H3K27 acetylation","type":"exact"}],"termid":"GO:0043974"}


id: GO:0004839
data:
  {"annotated_genes":["SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74243],"is_not":false,"summary":null,"term":"GO:0004839"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: E1 + ubiquitin + ATP--> E1-ubiquitin + AMP + PPi, where the E1-ubiquitin linkage is a thioester bond between the C-terminal glycine of Ub and a sulfhydryl side group of an E1 cysteine residue. This is the first step in a cascade of reactions in which ubiquitin is ultimately added to a protein substrate.","definition_xrefs":["GOC:BioGRID","Wikipedia:Ubiquitin-activating_enzyme"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ubiquitin activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8852132","Reactome:R-HSA-8865050","Reactome:R-HSA-8865090","EC:6.2.1.45","Reactome:R-HSA-8865098","Reactome:R-HSA-8852134","Reactome:R-HSA-8852133"],"synonyms":[{"name":"E1 ubiquitin-activating enzyme","type":"related"}],"termid":"GO:0004839","terms_by_termid":{"GO:0004839":null}}


id: PATO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality of inhering in a male by virtue of the bearer's disposition to initiate, sustain, or support reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male fertility","termid":"PATO:0000279"}


id: GO:0045003
data:
  {"annotated_genes":["SJAG_01708","SJAG_02294","SJAG_04530","SJAG_03221","SJAG_01410","SJAG_00935","SJAG_02690","SJAG_02460","SJAG_00757","SJAG_02708","SJAG_02465","SJAG_02267","SJAG_02079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71429,78300,108466,117773],"is_not":false,"summary":null,"term":"GO:0045003"},{"annotations":[65780,72598,75444,76176,65200],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000730"},{"annotations":[78885],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000707"},{"annotations":[107981,110631],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[100970],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"SDSA is a major mechanism of double-strand break repair in mitosis which allows for the error-free repair of a double-strand break without the exchange of adjacent sequences. The broken DNA searches for and base pairs with a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template. Newly synthesized DNA is then displaced from the template and anneal with its complement on the other side of the double-strand break.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_00935":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via synthesis-dependent strand annealing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693554"],"synonyms":[{"name":"SDSA","type":"broad"},{"name":"mitotic gene conversion","type":"related"}],"termid":"GO:0045003","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null,"GO:0045003":null,"GO:1902346":null}}


id: PBO:0005740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Ppe1","termid":"PBO:0005740"}


id: PBO:0050378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 2","termid":"PBO:0050378"}


id: GO:0090707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of a plant organ or tissue with reference to an axis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of anatomical structure orientation","termid":"GO:0048560"},{"relation_name":"part_of","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of plant organ orientation","termid":"GO:0090707"}


id: PBO:0038299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_date","termid":"PBO:0038299"}


id: PBO:0068735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 6, pseudogene","termid":"PBO:0068735"}


id: PBO:0052042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kidney associated DCDC2 antisense RNA 1","termid":"PBO:0052042"}


id: PBO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP synthase complex assembly protein Atp25 (predicted)","termid":"PBO:0000330"}


id: MONDO:0011278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bile duct cysts (obsolete MONDO:0011278)","termid":"MONDO:0011278","xrefs":{"Monarch":{"xref_id":"0011278"}}}


id: MONDO:0004126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the thyroid gland. This category includes Hashimoto thyroiditis, Riedel thyroiditis, acute thyroiditis, subacute thyroiditis, and radiation-induced thyroiditis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroiditis","secondary_identifiers":["UMLS:C0040147","MEDGEN:21548","DOID:7166","icd11.foundation:587793334","HP:0100646","ICD9:245","SCTID:82119001","NCIT:C26894","ICD9:245.9","MESH:D013966"],"synonyms":[{"name":"inflammation of thyroid gland","type":"exact"},{"name":"thyroid gland inflammation","type":"exact"},{"name":"thyroiditis","type":"exact"},{"name":"thyroiditis (disease)","type":"exact"}],"termid":"MONDO:0004126","xrefs":{"Monarch":{"xref_id":"0004126"}}}


id: PR:Q9USJ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USJ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H-dependent FMN reductase C4B3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.06c","synonyms":[{"name":"FMN reductase C4B3.06c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FMN reductase [NAD(P)H] (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC4B3.06c","type":"exact"},{"name":"azoreductase C4B3.06c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USJ6"}


id: GO:0033340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pelvic fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin development","termid":"GO:0033333"},{"relation_name":"is_a","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelvic fin development","termid":"GO:0033340"}


id: MONDO:0015596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-herpetic acute limbic encephalitis is a rare neuroinflammatory/neuroautoimmune disease characterized by an acute (or subacute) onset of disturbance of consciousness (occasionally presenting as convulsions) and high fever, associated with cerebral lesions (on magnetic resonance imaging) that are restricted to the limbic system (particularly the hippocampi and amygdalae), in the absence of viral, bacterial, fungal, paraneoplastic and other disorders.","definition_xrefs":["Orphanet:163924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limbic encephalitis","termid":"MONDO:0015588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-herpetic acute limbic encephalitis","secondary_identifiers":["SCTID:764998005","MEDGEN:1646654","UMLS:C4707262"],"termid":"MONDO:0015596","xrefs":{"Monarch":{"xref_id":"0015596"}}}


id: PBO:0084307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron transporter of the mitochondrial carrier family; mediates Fe2+ transport across the inner mitochondrial membrane; active under low-iron conditions; may transport other cations; protein abundance increases in response to DNA replication stress; MRS4 has a paralog, MRS3, that arose from the whole genome duplication","termid":"PBO:0084307"}


id: GO:0021927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to deep nuclear neurons.","definition_xrefs":["PMID:15157725","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deep nuclear neuron precursor proliferation","termid":"GO:0021927"}


id: FYPO:0005735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is increased during mitotic M-phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to kinetochore during vegetative growth","termid":"FYPO:0003003"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to kinetochore during mitotic M phase","synonyms":[{"name":"increased protein localisation to kinetochore during mitosis","type":"exact"},{"name":"increased protein localization to kinetochore during mitotic M phase","type":"related"},{"name":"increased protein localization to kinetochore during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005735"}


id: FYPO:0000594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of transposition is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased transposition","synonyms":[{"name":"increased transposable element transposition","type":"exact"},{"name":"increased transposition during mitotic cell cycle","type":"related"},{"name":"increased transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: increased","type":"related"}],"termid":"FYPO:0000594"}


id: FYECO:0000417
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, methionine nitrogen source","synonyms":[{"name":"glucose minimal medium, methionine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, methionine nitrogen source","type":"related"}],"termid":"FYECO:0000417"}


id: GO:0018322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a tyrosine molecule to a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein tyrosinylation (obsolete GO:0018322)","synonyms":[{"name":"protein amino acid tyrosinylation","type":"exact"}],"termid":"GO:0018322"}


id: PBO:0025451
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial hypercholesterolemia","termid":"PBO:0025451"}


id: PBO:0002505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide methionine sulfoxide reductase (predicted)","termid":"PBO:0002505"}


id: PBO:0062449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 116 pseudogene","termid":"PBO:0062449"}


id: PBO:0069367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 627, pseudogene","termid":"PBO:0069367"}


id: GO:0042902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of linking a protein to peptidoglycan via a carboxy terminal threonine carboxyl group through a pentaglycyl peptide to the lysine or diaminopimelic acid of the peptidoglycan.","definition_xrefs":["RESID:AA0345"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan-protein cross-linking via L-threonyl-pentaglycyl-murein (obsolete GO:0042902)","termid":"GO:0042902"}


id: PBO:0061596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotensin receptor 2","termid":"PBO:0061596"}


id: MONDO:0007442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dentinogenesis imperfecta type 3 (DGI-3) is a rare, severe form of dentinogenesis imperfecta (DGI) characterized by opalescent primary and permanent teeth, marked attrition, large pulp chambers, multiple pulp exposure and shell teeth radiographically (i.e. teeth which appear hollow due to dentin hypotrophy).","definition_xrefs":["Orphanet:166265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dentinogenesis imperfecta","termid":"MONDO:0018849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentinogenesis imperfecta type 3","secondary_identifiers":["NORD:1043","MESH:C538216","ICD9:520.5","GARD:10144","OMIM:125500","UMLS:C0399378","MEDGEN:97995","SCTID:234970006","icd11.foundation:518257495"],"synonyms":[{"name":"DGI-III","type":"exact"},{"name":"Dentinogenesis Imperfecta Type III","type":"exact"},{"name":"brandywine type dentinogenesis imperfecta","type":"exact"},{"name":"dentinogenesis imperfecta Shields type 3","type":"exact"},{"name":"dentinogenesis imperfecta type III","type":"exact"},{"name":"dentinogenesis imperfecta, Shields type 3","type":"exact"},{"name":"dentinogenesis imperfecta, Shields type III","type":"exact"}],"termid":"MONDO:0007442","xrefs":{"Monarch":{"xref_id":"0007442"}}}


id: PBO:0061033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninein like","termid":"PBO:0061033"}


id: PBO:0089821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor subunit Rrn7","termid":"PBO:0089821"}


id: PBO:0087770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome and SSU processome complexes; involved in production of 18S rRNA and assembly of small ribosomal subunit; member of t-Utp subcomplex involved with transcription of 35S rRNA transcript; Small Subunit processome is also known as SSU processome","termid":"PBO:0087770"}


id: GO:0071800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a podosome, an actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"podosome assembly","termid":"GO:0071800"}


id: PBO:0063235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha cluster, complex locus","termid":"PBO:0063235"}


id: PBO:0042294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD4 molecule","termid":"PBO:0042294"}


id: GO:0047602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetate + H+ = acetone + CO2.","definition_xrefs":["EC:4.1.1.4","RHEA:19729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"acetoacetate decarboxylase activity","secondary_identifiers":["MetaCyc:ACETOACETATE-DECARBOXYLASE-RXN","KEGG_REACTION:R01366"],"synonyms":[{"name":"acetoacetate carboxy-lyase (acetone-forming)","type":"related"},{"name":"acetoacetate carboxy-lyase activity","type":"related"},{"name":"acetoacetic acid decarboxylase activity","type":"related"}],"termid":"GO:0047602"}


id: MONDO:0037398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pulmonary disease characterized by primary or nonbacteremic pneumonia most frequently arising in an intensive care setting, or bacteremic pneumonia, which is typically associated with neutropenia. Chronic lower respiratory tract infection with development of episodes of pneumonia is common in patients with cystic fibrosis. Acute infections are potentially life-threatening. Patients present with fever, chills, dyspnea, cyanosis, productive cough, as well as signs of severe systemic toxicity. Alveolar hemorrhage, necrosis, and, eventually, cavity formation, are commonly seen.","definition_xrefs":["Orphanet:90066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"Pseudomonas aeruginosa infectious disease","termid":"MONDO:0040732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia caused by pseudomonas aeruginosa infection","secondary_identifiers":["icd11.foundation:801706385","UMLS:C0920182","GARD:13613","MEDGEN:852026"],"termid":"MONDO:0037398","xrefs":{"Monarch":{"xref_id":"0037398"}}}


id: PBO:0028531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-explosive_cytokinetic_cell_separation_resulting_in_vegetative_cell_lysis","termid":"PBO:0028531"}


id: PBO:0068144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 451","termid":"PBO:0068144"}


id: MOD:01728
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01728"}


id: MONDO:0011434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 5, susceptibility to","secondary_identifiers":["UMLS:C1858536","OMIM:604316","DOID:0111282","MEDGEN:347660"],"synonyms":[{"name":"PSORS5","type":"exact"},{"name":"psoriasis 5, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 5","type":"exact"}],"termid":"MONDO:0011434","xrefs":{"Monarch":{"xref_id":"0011434"}}}


id: GO:0002316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell in the spleen acquires the specialized features of a follicular B cell. Follicular B cells are major population of mature recirculating B cells in the spleen and are located in the B-cell follicle region.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular B cell differentiation","synonyms":[{"name":"follicular B cell development","type":"related"},{"name":"follicular B lymphocyte differentiation","type":"exact"},{"name":"follicular B-cell differentiation","type":"exact"},{"name":"follicular B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002316"}


id: GO:0008480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sarcosine + H2O + electron-transfer flavoprotein = glycine + formaldehyde + reduced electron-transfer flavoprotein.","definition_xrefs":["EC:1.5.8.3","RHEA:19793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sarcosine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00611","Reactome:R-HSA-6797913","MetaCyc:SARCOSINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"monomethylglycine dehydrogenase activity","type":"related"},{"name":"sarcosine N-demethylase activity","type":"related"},{"name":"sarcosine:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"sarcosine:acceptor oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0008480"}


id: MONDO:1010865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-mannosidosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidosis, non-human animal","termid":"MONDO:1010172"},{"relation_name":"is_a","term_name":"lysosomal storage disease, cattle","termid":"MONDO:1010862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidosis, cattle","secondary_identifiers":["OMIA:000625-9913"],"termid":"MONDO:1010865","xrefs":{"Monarch":{"xref_id":"1010865"}}}


id: PBO:0041032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2B","termid":"PBO:0041032"}


id: MONDO:0018795
data:
  {"annotated_genes":["SJAG_04509","SJAG_02431","SJAG_03703","SJAG_01852"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86682,86681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015912"},{"annotations":[86229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014757"},{"annotations":[87409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01852":null,"SJAG_02431":null,"SJAG_03703":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"syndromic constitutional thrombocytopenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843101","UMLS:C5681257","GARD:21967","Orphanet:477794"],"synonyms":[{"name":"syndromic constitutional thrombocytopenia","type":"exact"}],"termid":"MONDO:0018795","terms_by_termid":{"MONDO:0010121":null,"MONDO:0014757":null,"MONDO:0015912":null},"xrefs":{"Monarch":{"xref_id":"0018795"}}}


id: SO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif to which the S. pombe Zas1 protein binds. The consensus sequence is 5'-(Y)CCCCAY-3'.","definition_xrefs":["PMID:29735745","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zas1_recognition_motif","synonyms":[{"name":"Zas1 recognition motif","type":"exact"}],"termid":"SO:0002215"}


id: PBO:0085754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; stabilizes several plasma membrane amino acid transporters by antagonizing their ubiquitin-mediated degradation; phosphorylates Aly2p; negatively regulates Ldb19p-mediated endocytosis by phosphorylating Ldb19p; positively regulates activity of the three Mep ammonium transport proteins; mediates inhibitory phosphorylation of Mep2p and Par32p; TOR complex negatively regulates Npr1p activity; NPR1 has a paralog, PRR2, that arose from the whole genome duplication","termid":"PBO:0085754"}


id: FYPO:0000130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000120","FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"short spindle","synonyms":[{"name":"decreased spindle length","type":"exact"},{"name":"short spindles","type":"exact"},{"name":"spindle defects, short spindles","type":"exact"}],"termid":"FYPO:0000130"}


id: MONDO:0016003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Ehrlichia.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease","termid":"MONDO:0006922"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ehrlichiosis","secondary_identifiers":["GARD:2092","icd11.foundation:1116297863","ICD9:082.40","UMLS:C0085399","MEDGEN:39039","SCTID:240626005","MESH:D016873","Orphanet:1902","ICD9:082.4","DOID:10242"],"synonyms":[{"name":"human ehrlichiosis","type":"exact"}],"termid":"MONDO:0016003","xrefs":{"Monarch":{"xref_id":"0016003"}}}


id: PBO:0018207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transmembrane transporter family protein Opt3","termid":"PBO:0018207"}


id: PBO:0039100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 4","termid":"PBO:0039100"}


id: MONDO:0015203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary artery congenital malformation","secondary_identifiers":["icd11.foundation:902783759","MEDGEN:1612789","MedDRA:10061060","Orphanet:1081","UMLS:C4531298","GARD:1534"],"termid":"MONDO:0015203","xrefs":{"Monarch":{"xref_id":"0015203"}}}


id: MONDO:0020440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent left superior vena cava connecting to the left-sided atrium is a rare, congenital vascular malformation of the major vessels characterized by a persistent left superior vena cava which drains directly to the left atrium, without passing through the coronary sinus (that may be absent in some cases). Patients are usually asymptomatic and discovered incidentally, however hypoxia, cyanosis, murmurs, palpitations, cardiac structural anomalies (e.g. atrial septal defect, bicuspid aortic valve, cor triatrium) and risk of paradoxical embolization may be associated.","definition_xrefs":["Orphanet:99109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent left superior vena cava connecting to the left-sided atrium","secondary_identifiers":["MEDGEN:1830102","UMLS:C5680293","GARD:19652"],"synonyms":[{"name":"left superior caval vein persisting to the left-sided atrium","type":"exact"},{"name":"persistent left SVC connecting to the left-sided atrium","type":"exact"},{"name":"persistent left superior caval vein connecting to the left-sided atrium","type":"exact"}],"termid":"MONDO:0020440","xrefs":{"Monarch":{"xref_id":"0020440"}}}


id: PBO:0069075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 322, pseudogene","termid":"PBO:0069075"}


id: GO:0032435
data:
  {"annotated_genes":["SJAG_00475","SJAG_00052","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77642,107274],"is_not":false,"summary":null,"term":"GO:0032435"},{"annotations":[102680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"is_a","term_name":"negative regulation of proteasomal protein catabolic process","termid":"GO:1901799"},{"relation_name":"is_a","term_name":"negative regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000059"},{"relation_name":"negatively_regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"down-regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"downregulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"inhibition of proteasomal ubiquitin-dependent protein catabolic process","type":"narrow"}],"termid":"GO:0032435","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: PBO:0114136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulphite transmembrane transporter Ssu3","termid":"PBO:0114136"}


id: GO:0016504
data:
  {"annotated_genes":["SJAG_04211","SJAG_00837","SJAG_05252","SJAG_04484","SJAG_02625","SJAG_00591"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71058,75625,77262,79317],"is_not":false,"summary":null,"term":"GO:0016504"},{"annotations":[78500,74573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061133"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a peptidase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"peptidase regulator activity","termid":"GO:0061134"},{"relation_name":"positively_regulates","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02625":null,"SJAG_04211":null,"SJAG_04484":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"positively_regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0008233"},{"rel_name":"positively_regulates","termid":"GO:0008233"},{"rel_name":"positively_regulates","termid":"GO:0140096"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0008233","GO:0140096","GO:0098772","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"peptidase activator activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-168865"],"synonyms":[{"name":"protease activator activity","type":"narrow"}],"termid":"GO:0016504","terms_by_termid":{"GO:0016504":null,"GO:0061133":null}}


id: PBO:0078791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 14-1","termid":"PBO:0078791"}


id: PBO:0030751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcriptional_response_to_pheromone_at_normal_pheromone_level_(obsolete_FYPO:0000986)","termid":"PBO:0030751"}


id: PBO:0054359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1752","termid":"PBO:0054359"}


id: GO:1900208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiolipin metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of cardiolipin metabolic process","synonyms":[{"name":"regulation of cardiolipin metabolism","type":"exact"},{"name":"regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"regulation of diphosphatidylglycerol metabolism","type":"related"}],"termid":"GO:1900208"}


id: PBO:0091704
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human U2AF2","termid":"PBO:0091704"}


id: GO:0072575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the shaping of the liver.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"liver morphogenesis","termid":"GO:0072576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in liver morphogenesis","termid":"GO:0072575"}


id: GO:0160102
data:
  {"annotated_genes":["SJAG_04181"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63193],"is_not":false,"summary":null,"term":"GO:0160102"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine(10) in tRNA + S-adenosyl-L-methionine = H+ + N(2)-methylguanosine(10) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140098","GO:0140101","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"tRNA (guanine(10)-N2)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["Reactome:R-HSA-6786501","RHEA:43128"],"synonyms":[{"name":"tRNA (guanine(10)-N(2))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(10)-N(2))-methyltransferase activity","type":"exact"}],"termid":"GO:0160102","terms_by_termid":{"GO:0160102":null}}


id: MONDO:0012324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare partial deletion of the long arm of chromosome 14 characterized by ocular anomalies (anopthalmia/microphthalmia, ptosis, hypertelorism, exophthalmos), pituitary anomalies (pituitary hypoplasia/aplasia with growth hormone deficiency and growth retardation) and hand/foot anomalies (polydactyly, short digits, pes cavus). Other clinical features may include muscular hypotonia, psychomotor development delay/intellectual disability, dysmorphic signs (facial asymmetry, microretrognathia, high-arched palate, ear anomalies), congenital genitourinary malformations, hearing impairment. Smaller 14q22 deletions may have variable expression.","definition_xrefs":["Orphanet:264200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Frias syndrome","secondary_identifiers":["OMIM:609640","MEDGEN:400621","Orphanet:2055","UMLS:C1864825","GARD:2384","MESH:C535639"],"synonyms":[{"name":"14q22-q23 microdeletion syndrome","type":"exact"},{"name":"14q22q23 microdeletion syndrome","type":"exact"},{"name":"Del(14)(q22q23)","type":"exact"},{"name":"Frias syndrome","type":"exact"},{"name":"Growth deficiency, Facial anomalies, and brachydactyly","type":"related"},{"name":"chromosome 14Q22 deletion syndrome","type":"related"},{"name":"monosomy 14q22-q23","type":"exact"},{"name":"monosomy 14q22q23","type":"exact"}],"termid":"MONDO:0012324","xrefs":{"Monarch":{"xref_id":"0012324"}}}


id: MONDO:0859300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant 10","secondary_identifiers":["UMLS:C5774234","MEDGEN:1824007","DOID:0081399","OMIM:620080"],"synonyms":[{"name":"neuronopathy, distal hereditary motor, type X","type":"exact"}],"termid":"MONDO:0859300","xrefs":{"Monarch":{"xref_id":"0859300"}}}


id: FYPO:0004356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleolus","termid":"FYPO:0003687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to nucleolus","synonyms":[{"name":"increased protein localisation to nucleolus","type":"exact"},{"name":"increased protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0004356"}


id: MONDO:0032687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with abnormal behavior, microcephaly, and short stature","secondary_identifiers":["DOID:0081265","UMLS:C5193039","GARD:18516","MEDGEN:1675423","OMIM:618342"],"synonyms":[{"name":"IDDABS","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH ABNORMAL BEHAVIOR, MICROCEPHALY, AND SHORT STATURE","type":"related"}],"termid":"MONDO:0032687","xrefs":{"Monarch":{"xref_id":"0032687"}}}


id: GO:0030267
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75500,75610],"is_not":false,"summary":null,"term":"GO:0030267"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glycolate + NADP+ = glyoxylate + NADPH + H+.","definition_xrefs":["RHEA:10992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyoxylate reductase activity","termid":"GO:0106345"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glyoxylate reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-389826","Wikipedia:Glyoxylate_reductase_(NADP+)","EC:1.1.1.79","MetaCyc:GLYOXYLATE-REDUCTASE-NADP+-RXN"],"synonyms":[{"name":"NADPH-glyoxylate reductase activity","type":"related"},{"name":"glycolate:NADP+ oxidoreductase activity","type":"related"},{"name":"glyoxylate reductase (NADP+)","type":"related"}],"termid":"GO:0030267","terms_by_termid":{"GO:0030267":null}}


id: MONDO:0009666
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86604],"is_not":false,"summary":null,"term":"MONDO:0009666"}]},"cv_name":"mondo","definition":"A rare, early-onset and life-threatening, multiple carboxylase deficiency that when left untreated, is characterized by vomiting, tachypnea, irritability, lethargy, exfoliative dermatitis, and seizures that can worsen to coma and death.","definition_xrefs":["Orphanet:79242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"multiple carboxylase deficiency","termid":"MONDO:0015454"},{"relation_name":"is_a","term_name":"inborn disorder of branched-chain amino acid metabolism","termid":"MONDO:0019242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0004736"],"is_obsolete":false,"name":"holocarboxylase synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:253270","NANDO:1200821","DOID:859","ICD9:270.8","NCIT:C98842","SCTID:15307001","SCTID:360369003","UMLS:C0268581","MESH:D028922","MEDGEN:120653","GARD:2721"],"synonyms":[{"name":"HLCS deficiency","type":"related"},{"name":"biotin-(propionyl-CoA-carboxylase) ligase deficiency","type":"exact"},{"name":"early-onset multiple carboxylase deficiency","type":"exact"},{"name":"holocarboxylase synthase deficiency","type":"exact"},{"name":"holocarboxylase synthetase deficiency","type":"exact"},{"name":"multiple carboxylase deficiency","type":"broad"},{"name":"multiple carboxylase deficiency - neonatal onset","type":"exact"},{"name":"multiple carboxylase deficiency, early onset","type":"related"},{"name":"multiple carboxylase deficiency, neonatal form","type":"related"},{"name":"neonatal multiple carboxylase deficiency","type":"exact"}],"termid":"MONDO:0009666","terms_by_termid":{"MONDO:0009666":null},"xrefs":{"Monarch":{"xref_id":"0009666"}}}


id: PBO:0076070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STRA6 like, pseudogene","termid":"PBO:0076070"}


id: GO:2000031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salicylic acid mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of salicylic acid mediated signaling pathway","synonyms":[{"name":"regulation of salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:2000031"}


id: MONDO:0024533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary pulmonary hypertension in which the cause of the disease is a mutation in the BMPR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heritable pulmonary arterial hypertension","termid":"MONDO:0017148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypertension, primary, 1","secondary_identifiers":["OMIM:178600","MEDGEN:1643124","UMLS:C4552070"],"synonyms":[{"name":"BMPR2 primary pulmonary hypertension","type":"exact"},{"name":"PHT","type":"related"},{"name":"PPH1","type":"related"},{"name":"Pph1 with Hht","type":"related"},{"name":"primary pulmonary hypertension caused by mutation in BMPR2","type":"exact"},{"name":"pulmonary arterial hypertension","type":"related"},{"name":"pulmonary hypertension, familial primary, 1, with or without HHT","type":"exact"},{"name":"pulmonary hypertension, primary, 1","type":"exact"},{"name":"pulmonary hypertension, primary, 1, with hereditary hemorrhagic telangiectasia","type":"related"},{"name":"pulmonary hypertension, primary, Dexfenfluramine-associated","type":"related"},{"name":"pulmonary hypertension, primary, Fenfluramine-associated","type":"related"},{"name":"pulmonary hypertension, primary, fenfluramine or dexfenfluramine-associated","type":"exact"}],"termid":"MONDO:0024533","xrefs":{"Monarch":{"xref_id":"0024533"}}}


id: GO:0071304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B6 stimulus. Vitamin B6 encompasses pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B6","termid":"GO:0034516"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B6","termid":"GO:0071304"}


id: MONDO:0030916
data:
  {"annotated_genes":["SJAG_04179","SJAG_02920"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85444,85445],"is_not":false,"summary":null,"term":"MONDO:0030916"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02920":null,"SJAG_04179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 50","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1616989","OMIM:617787","UMLS:C4540470","DOID:0080233"],"synonyms":[{"name":"MRD50","type":"related"},{"name":"autosomal dominant intellectual disability 50","type":"related"},{"name":"autosomal dominant mental retardation 50","type":"related"},{"name":"intellectual developmental disorder, autosomal dominant 50, with behavioral abnormalities","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 50, with behavioural abnormalities","type":"exact"},{"name":"intellectual disability, autosomal dominant 50","type":"exact"},{"name":"mental retardation, autosomal dominant 50","type":"related"}],"termid":"MONDO:0030916","terms_by_termid":{"MONDO:0030916":null},"xrefs":{"Monarch":{"xref_id":"0030916"}}}


id: MONDO:0700260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any type 1 interferonopathies in which the cause of the disease is a variation in the SAMHD1 gene. Individuals with variants in SAMHD1 can present with a variety of phenotypes, including Aicardi-Goutieres syndrome and chilblain lupus.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy","termid":"MONDO:0700264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMHD1-related type 1 interferonopathy","termid":"MONDO:0700260","xrefs":{"Monarch":{"xref_id":"0700260"}}}


id: PBO:0053958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1265","termid":"PBO:0053958"}


id: PBO:0065883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB33A, member RAS oncogene family","termid":"PBO:0065883"}


id: GO:0047858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydroxyfumarate + H+ = 2-hydroxy-3-oxopropanoate + CO2.","definition_xrefs":["RHEA:13845","EC:4.1.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"dihydroxyfumarate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03127","MetaCyc:DIHYDROXYFUMARATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"dihydroxyfumarate carboxy-lyase (tartronate-semialdehyde-forming)","type":"related"},{"name":"dihydroxyfumarate carboxy-lyase activity","type":"related"}],"termid":"GO:0047858"}


id: PBO:0082651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Shu complex (aka PCSS complex); Shu complex also includes Psy3, Csm2, Shu2, and promotes error-free DNA repair, mediates inhibition of Srs2p function; essential for promoting the establishment of homolog bias during meiotic homologous recombination; promotes both crossover (CO) and non-crossover (NCO) pathways of meiotic recombination and formation of Rad51p filaments","termid":"PBO:0082651"}


id: GO:1990832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed slow movement of non-membranous molecules in nerve cell axons. It is comprised of a Slow Component a (SCa) and a Slow Component b (SCb) which differ in transport rates and protein composition.","definition_xrefs":["PMID:6378920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"slow axonal transport","termid":"GO:1990832"}


id: PBO:0031378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiosis","termid":"PBO:0031378"}


id: PBO:0043389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 3","termid":"PBO:0043389"}


id: GO:0003312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and functional features of a pancreatic polypeptide-producing cell. A pancreatic polypeptide-producing cell is a cell in the pancreas that produces pancreatic polypeptide.","definition_xrefs":["PMID:11076772","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic PP cell differentiation","synonyms":[{"name":"pancreatic polypeptide-producing cell differentiation","type":"exact"}],"termid":"GO:0003312"}


id: GO:0015089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a copper ions (Cu2+) from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["TC:9.A.11.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transporter activity","termid":"GO:0005375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity copper ion transmembrane transporter activity","synonyms":[{"name":"high affinity copper ion transmembrane transporter activity","type":"exact"},{"name":"high affinity copper transporter activity","type":"exact"}],"termid":"GO:0015089"}


id: PBO:0072017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 4","termid":"PBO:0072017"}


id: PR:O13797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1142.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small glutamine-rich tetratricopeptide repeat-containing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.02c","synonyms":[{"name":"Spom972h-SPAC1142.02c","type":"exact"}],"termid":"PR:O13797"}


id: GO:0030272
data:
  {"annotated_genes":["SJAG_01616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72895],"is_not":false,"summary":null,"term":"GO:0030272"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formyltetrahydrofolate + ATP = 5,10-methenyltetrahydrofolate + ADP + H+ + phosphate.","definition_xrefs":["RHEA:10488","EC:6.3.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"5-formyltetrahydrofolate cyclo-ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6801342","KEGG_REACTION:R02301","MetaCyc:5-FORMYL-THF-CYCLO-LIGASE-RXN","GO:0019006"],"synonyms":[{"name":"5,10-methenyltetrahydrofolate synthetase activity","type":"related"},{"name":"5-Formyltetrahydrofolate cyclodehydrase activity","type":"related"},{"name":"5-formyltetrahydrofolate cyclo-ligase (ADP-forming)","type":"related"},{"name":"5-formyltetrahydrofolate cyclodehydrase","type":"broad"},{"name":"formyltetrahydrofolic cyclodehydrase activity","type":"related"},{"name":"methenyl-THF synthetase activity","type":"related"}],"termid":"GO:0030272","terms_by_termid":{"GO:0030272":null}}


id: PBO:0003480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family homolog Png2","termid":"PBO:0003480"}


id: PBO:0067654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 831, pseudogene","termid":"PBO:0067654"}


id: PBO:0046610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 12","termid":"PBO:0046610"}


id: MONDO:0060688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthyroxinemia, euthyroid, caused by generalized 5-prime-deiodinase deficiency","secondary_identifiers":["MEDGEN:326643","UMLS:C1840059","OMIM:617953"],"synonyms":[{"name":"hyperthyroxinemia, euthyroid, caused by generalized 5-prime-deiodinase deficiency","type":"exact"},{"name":"hyperthyroxinemia, euthyroid, due to decreased peripheral conversion of T4","type":"related"}],"termid":"MONDO:0060688","xrefs":{"Monarch":{"xref_id":"0060688"}}}


id: PBO:0051290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-8","termid":"PBO:0051290"}


id: MONDO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagenopathy","termid":"MONDO:0004603","xrefs":{"Monarch":{"xref_id":"0004603"}}}


id: PBO:0073415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 21","termid":"PBO:0073415"}


id: PBO:0045215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C8","termid":"PBO:0045215"}


id: GO:2000100
data:
  {"annotated_genes":["SJAG_03581","SJAG_02022","SJAG_00845","SJAG_00333","SJAG_00596","SJAG_04461","SJAG_03637","SJAG_00236","SJAG_01799","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91464,94907,95983,104854,113378,119119],"is_not":false,"summary":null,"term":"GO:2000100"},{"annotations":[105682,94066,100501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[104019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity","termid":"GO:2000099"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000100","terms_by_termid":{"GO:0061361":null,"GO:2000100":null,"GO:2000247":null}}


