# terms

id: GO:1904538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycolytic process through fructose-6-phosphate.","definition_xrefs":["ISBN:0879010479","GOC:dph","ISBN:0201090910","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycolytic process","termid":"GO:0006110"},{"relation_name":"regulates","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"regulation of glycolytic process through fructose-6-phosphate","secondary_identifiers":["Reactome:R-HSA-9634600"],"synonyms":[{"name":"regulation of glycolysis through fructose-6-phosphate","type":"exact"}],"termid":"GO:1904538"}


id: GO:0099574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission by regulating protein degradation at the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"regulation protein catabolic process at synapse","termid":"GO:0140250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of protein catabolic process at synapse, modulating synaptic transmission","termid":"GO:0099574"}


id: MONDO:0013743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of systemic lupus erythematosus (disease) that is caused by mutations in DNASE1L3.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autosomal systemic lupus erythematosus type 16","secondary_identifiers":["GARD:17368","Orphanet:300345","UMLS:C3280742","OMIM:614420","MEDGEN:482372"],"synonyms":[{"name":"SLEB16","type":"exact"},{"name":"autosomal SLE","type":"broad"},{"name":"familial SLE","type":"broad"},{"name":"familial systemic lupus erythematosus","type":"broad"},{"name":"systemic lupus erythematosus 16","type":"exact"},{"name":"systemic lupus erythematosus type 16","type":"exact"}],"termid":"MONDO:0013743","xrefs":{"Monarch":{"xref_id":"0013743"}}}


id: MONDO:0015824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculomaxillofacial dysostosis is a rare, genetic bone developmental disorder characterized by short stature, orbital region and ocular abnormalities (e.g. asymmetric orbits, anophthalmia, down-slanted and S-shaped palpebral fissures, sparse eyebrows/eyelashes, abnormal eyelids, ectropion, symblepharon, corneal leukoma), abnormal nose (e.g. broad and abnormally modeled nasal root, bridge and tip, lateral deviation), malar hypoplasia, cleft lip/palate, and oblique facial clefts. Intellectual disability, microcephaly, micrognathia and limb anomalies (e.g. hemimelia, abnormal scapular girdle, brachydactyly, syndactyly, broad halluces) have also been reported.","definition_xrefs":["Orphanet:1794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"oculomaxillofacial dysostosis","secondary_identifiers":["icd11.foundation:921026296","MESH:C537736","SCTID:763830009","UMLS:C1838348","MEDGEN:333072","GARD:4046"],"synonyms":[{"name":"Richieri Costa Gorlin syndrome","type":"related"},{"name":"Richieri-Costa-Gorlin syndrome","type":"exact"},{"name":"oblique facial clefts","type":"related"},{"name":"oculomaxillofacial dysplasia with oblique facial clefts","type":"related"}],"termid":"MONDO:0015824","xrefs":{"Monarch":{"xref_id":"0015824"}}}


id: PBO:0017807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease type C2 protein hE1 homolog Npc2 (predicted)","termid":"PBO:0017807"}


id: GO:0009023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-cysteine + activated-tRNA = L-serine + tRNA containing a thionucleotide.","definition_xrefs":["EC:2.8.1.4","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA sulfurtransferase (obsolete GO:0009023)","synonyms":[{"name":"tRNA sulfurtransferase","type":"exact"},{"name":"tRNA sulphurtransferase activity","type":"exact"}],"termid":"GO:0009023"}


id: MONDO:0018183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Staphylococcal necrotizing pneumonia is a rare, bacterial, pulmonary infectious disease, caused by a Panton-Valentine leukocidin-producing Staphylococcus aureus strain, characterized by severe respiratory failure, extensive, rapidly progressing pneumonia and hemorrhagic lung necrosis. Patients typically present with influenza-like symptoms, such as fever, cough, and chest pain, as well as hemoptysis, hypotension, leukopenia, and severe respiratory symptoms that rapidly evolve to acute respiratory distress syndrome and septic shock. High mortality is associated.","definition_xrefs":["Orphanet:36238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"staphylococcal toxemia","termid":"MONDO:0017592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal necrotizing pneumonia","secondary_identifiers":["GARD:18821","MEDGEN:1637863","UMLS:C4706659","SCTID:763888005"],"termid":"MONDO:0018183","xrefs":{"Monarch":{"xref_id":"0018183"}}}


id: MONDO:0019453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Refractory cytopenias with multilineage dysplasia (RCMD) is a frequent subtype of myelodysplastic syndrome (MDS) characterized by 1 or more cytopenias in the peripheral blood and dysplasia in 2 or more myeloid lineages.","definition_xrefs":["Orphanet:86836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractory hematologic cancer","termid":"MONDO:0004111"},{"relation_name":"is_a","term_name":"myelodysplastic syndrome","termid":"MONDO:0018881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic syndrome with multilineage dysplasia","secondary_identifiers":["MEDGEN:208726","GARD:19069","ICD9:238.72","MedDRA:10067959","SCTID:415285009","UMLS:C0796466","ICD10CM:D46.A","NCIT:C8574","ICDO:9985/3"],"synonyms":[{"name":"MDS-MLD","type":"exact"},{"name":"RCMD","type":"exact"},{"name":"refractory cytopenia with multilineage dysplasia","type":"exact"}],"termid":"MONDO:0019453","xrefs":{"Monarch":{"xref_id":"0019453"}}}


id: GO:0032558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adenyl deoxyribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide binding","termid":"GO:0032554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"}


id: MONDO:0004272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tuberculosis that involves the urinary bladder.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary bladder tuberculosis","secondary_identifiers":["DOID:754","ICD9:016.14","MEDGEN:509075","ICD9:016.1","SCTID:32268008","ICD9:016.10","UMLS:C0152793"],"synonyms":[{"name":"bladder tuberculosis","type":"related"},{"name":"bladder tuberculous","type":"exact"},{"name":"tuberculosis of bladder","type":"exact"},{"name":"tuberculosis of bladder, unspecified examination","type":"exact"},{"name":"tuberculous cystitis","type":"exact"},{"name":"urinary bladder tuberculosis","type":"exact"}],"termid":"MONDO:0004272","xrefs":{"Monarch":{"xref_id":"0004272"}}}


id: GO:0170034
data:
  {"annotated_genes":["SJAG_04549","SJAG_00830","SJAG_04149","SJAG_03712","SJAG_00412","SJAG_01346","SJAG_00660","SJAG_01455","SJAG_02972","SJAG_02841","SJAG_02832","SJAG_03124","SJAG_02791","SJAG_03881","SJAG_03152","SJAG_00234","SJAG_01461","SJAG_00695","SJAG_00395","SJAG_04577","SJAG_02400","SJAG_01466","SJAG_03312","SJAG_01955","SJAG_01592","SJAG_01630","SJAG_04054","SJAG_03985","SJAG_04425","SJAG_04449","SJAG_00636","SJAG_00107","SJAG_03457","SJAG_01574","SJAG_03243","SJAG_03614","SJAG_01061","SJAG_03671","SJAG_00392","SJAG_00248","SJAG_00120","SJAG_03306","SJAG_00881","SJAG_00635","SJAG_05007","SJAG_01019","SJAG_04145","SJAG_00592","SJAG_02293","SJAG_00869","SJAG_00359","SJAG_04098","SJAG_03167","SJAG_01137","SJAG_02388","SJAG_03775","SJAG_04459","SJAG_06635","SJAG_04042","SJAG_04652","SJAG_01404","SJAG_00495","SJAG_00396","SJAG_02505","SJAG_03055","SJAG_00502","SJAG_04688","SJAG_00309","SJAG_00432","SJAG_03266","SJAG_04747","SJAG_03141","SJAG_02313","SJAG_02290","SJAG_02689","SJAG_03562"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65589,111421,68736,106320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[78088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[71681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[78802,70561,106844,102943,118718,98482,111409,110794,112238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[111120,102480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[111563,118064,59831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[76924,64475,80625,60008,57872,78764,76167,71480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[110835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[104095,103614,91009,110762,108638,111426,113584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"},{"annotations":[113585,59350,75161,80268,91010,103615,77273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[58756,78197,78647,77240,79557,80434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[98846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[98667,78248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[78238,64669,91208,67521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[61076,80021,117239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"},{"annotations":[74571,77532,73625,79560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[80269,76431,64043,58683,77323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"},{"annotations":[70495,76420,75393,76993,96682,65074,113780,64431,77802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[74880,79373,112302,64257,72209,71398,64635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[70049,106322,77336,64636,112303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[79103,76995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-amino acids, the L-enantiomers of amino acids.","definition_xrefs":["GOC:edw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":76,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00120":null,"SJAG_00234":null,"SJAG_00248":null,"SJAG_00309":null,"SJAG_00359":null,"SJAG_00392":null,"SJAG_00395":null,"SJAG_00396":null,"SJAG_00412":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00502":null,"SJAG_00592":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00695":null,"SJAG_00830":null,"SJAG_00869":null,"SJAG_00881":null,"SJAG_01019":null,"SJAG_01061":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_01404":null,"SJAG_01455":null,"SJAG_01461":null,"SJAG_01466":null,"SJAG_01574":null,"SJAG_01592":null,"SJAG_01630":null,"SJAG_01955":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02313":null,"SJAG_02388":null,"SJAG_02400":null,"SJAG_02505":null,"SJAG_02689":null,"SJAG_02791":null,"SJAG_02832":null,"SJAG_02841":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03124":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03167":null,"SJAG_03243":null,"SJAG_03266":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03457":null,"SJAG_03562":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03775":null,"SJAG_03881":null,"SJAG_03985":null,"SJAG_04042":null,"SJAG_04054":null,"SJAG_04098":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04425":null,"SJAG_04449":null,"SJAG_04459":null,"SJAG_04549":null,"SJAG_04577":null,"SJAG_04652":null,"SJAG_04688":null,"SJAG_04747":null,"SJAG_05007":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"L-amino acid anabolism","type":"exact"},{"name":"L-amino acid biosynthesis","type":"exact"},{"name":"L-amino acid formation","type":"exact"},{"name":"L-amino acid synthesis","type":"exact"}],"termid":"GO:0170034","terms_by_termid":{"GO:0000105":null,"GO:0000162":null,"GO:0006532":null,"GO:0006542":null,"GO:0006564":null,"GO:0006571":null,"GO:0009086":null,"GO:0009088":null,"GO:0009094":null,"GO:0009098":null,"GO:0009099":null,"GO:0019284":null,"GO:0019509":null,"GO:0019878":null,"GO:0042450":null,"GO:0055129":null,"GO:0070981":null,"GO:0071266":null,"GO:0071269":null,"GO:0097054":null,"GO:1901705":null}}


id: FYPO:0007727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of late endosomes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system morphology","termid":"FYPO:0000353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal late endosome morphology","synonyms":[{"name":"abnormal PVE morphology","type":"exact"},{"name":"abnormal late endosome morphology during mitotic cell cycle","type":"related"},{"name":"abnormal late endosome morphology during vegetative growth","type":"exact"},{"name":"abnormal prevacuolar compartment morphology","type":"exact"},{"name":"abnormal prevacuolar endosome morphology","type":"exact"}],"termid":"FYPO:0007727"}


id: GO:0018398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-phenylalanine to form L-3'-bromophenylalanine.","definition_xrefs":["RESID:AA0175"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination to L-3'-bromophenylalanine (obsolete GO:0018398)","termid":"GO:0018398"}


id: GO:0044657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components by an organism to form a pore complex in a membrane of another organism, occurring as part of a symbiotic interaction.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete pore formation in membrane of other organism during symbiotic interaction (obsolete GO:0044657)","termid":"GO:0044657"}


id: PBO:0109262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory calcium-binding phosphoprotein proline-glutamine rich 1","termid":"PBO:0109262"}


id: FYPO:0006907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type) when the cell re-enters the mitotic cell cycle following nitrogen starvation-induced arrest in G1 phase. A mitotic cell size control checkpoint normally prevents cell cycle progression from G1 to S phase until the cell reaches a certain size.","definition_xrefs":["PMID:872890","PomBase:mah","GO:0031568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G1 cell size control checkpoint","termid":"FYPO:0006905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic G1 cell size control checkpoint following nitrogen starvation-induced arrest in G1 phase","synonyms":[{"name":"normal G1 cell size control checkpoint following nitrogen starvation-induced arrest in G1 phase during mitotic cell cycle","type":"related"},{"name":"normal mitotic G1 cell size control checkpoint activation following nitrogen starvation-induced arrest in G1 phase","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint following nitrogen starvation-induced G1 phase arrest","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint following nitrogen starvation-induced arrest in G1 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0006907"}


id: PBO:0068400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 217","termid":"PBO:0068400"}


id: PBO:0052873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 6-2","termid":"PBO:0052873"}


id: PBO:0074826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 22","termid":"PBO:0074826"}


id: MONDO:1012969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing loss disorder that occurs in non-human animals","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing disorder, non-human animal","termid":"MONDO:1011318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing loss disorder, non-human animal","termid":"MONDO:1012969","xrefs":{"Monarch":{"xref_id":"1012969"}}}


id: GO:0030354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of melanin-concentrating hormone, a cyclic peptide hormone that, upon receptor binding, induces melanin aggregation in melanocytes, and is also involved in regulating food intake and energy balance in mammals.","definition_xrefs":["PMID:9792536","GOC:mah","PMID:11416225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"positively_regulates","termid":"GO:0038023"},{"rel_name":"regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0005488","GO:0140677","GO:0003674","GO:0005515","GO:0098772"],"is_obsolete":false,"name":"melanin-concentrating hormone activity","termid":"GO:0030354"}


id: GO:0072159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to proximal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"},{"relation_name":"part_of","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in proximal tubule morphogenesis","termid":"GO:0072159"}


id: FYPO:0000453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of DNA in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered DNA level during vegetative growth","termid":"FYPO:0004321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"DNA content decreased during vegetative growth","synonyms":[{"name":"DNA content decreased during mitotic cell cycle","type":"related"},{"name":"DNA content reduced during vegetative growth","type":"exact"},{"name":"decreased DNA content during vegetative growth","type":"exact"},{"name":"decreased DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0000453"}


id: PBO:0031207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_actin_cortical_patch_localization","termid":"PBO:0031207"}


id: PR:O13954
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H4.13c gene.","definition_xrefs":["UniProtKB:O13954","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H4.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.13c","synonyms":[{"name":"Spom972h-SPAC23H4.13c","type":"exact"}],"termid":"PR:O13954"}


id: GO:1905926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["GOC:TermGenie","PMID:15684033","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invadopodium assembly (obsolete GO:1905926)","synonyms":[{"name":"activation of invadopodium assembly","type":"narrow"},{"name":"activation of invadopodium formation","type":"narrow"},{"name":"positive regulation of invadopodium formation","type":"exact"},{"name":"up regulation of invadopodium assembly","type":"exact"},{"name":"up regulation of invadopodium formation","type":"exact"},{"name":"up-regulation of invadopodium assembly","type":"exact"},{"name":"up-regulation of invadopodium formation","type":"exact"},{"name":"upregulation of invadopodium assembly","type":"exact"},{"name":"upregulation of invadopodium formation","type":"exact"}],"termid":"GO:1905926"}


id: PBO:0051121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-6 (pseudogene)","termid":"PBO:0051121"}


id: GO:0150051
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The network of the Golgi apparatus structures located within the postsynapse.","definition_xrefs":["PMID:23838184","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"postsynaptic Golgi apparatus","synonyms":[{"name":"Golgi outpost","type":"related"}],"termid":"GO:0150051"}


id: GO:0120538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methoxy-6-(all-trans-polyprenyl)phenol + 2 reduced [2Fe-2S]-[ferredoxin] + O2 + 2 H+ = 2-methoxy-6-(all-trans-polyprenyl)benzene-1,4-diol + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O.","definition_xrefs":["RHEA:81183","PMID:38425362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-methoxy-6-polyprenolphenol 4-hydroxylase activity","termid":"GO:0120538"}


id: PBO:0017827
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome Segregation in Meiosis","termid":"PBO:0017827"}


id: GO:1900934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene metabolic process","termid":"GO:1900932"},{"relation_name":"positively_regulates","term_name":"nonadec-1-ene metabolic process","termid":"GO:1900876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nonadec-1-ene metabolic process","synonyms":[{"name":"activation of nonadec-1-ene metabolic process","type":"narrow"},{"name":"activation of nonadec-1-ene metabolism","type":"exact"},{"name":"positive regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"up regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"up regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"up-regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"up-regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"upregulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"upregulation of nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900934"}


id: _global:lost
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X lost Y if X is a variant_of X' and Y part of X' but not X.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lost","termid":"_global:lost"}


id: PBO:0069765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1048, pseudogene","termid":"PBO:0069765"}


id: PBO:0045499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSG2 antisense RNA 1","termid":"PBO:0045499"}


id: PBO:0054170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1543","termid":"PBO:0054170"}


id: MONDO:0011594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian dysgenesis, hypergonadotropic, with short stature and recurrent metabolic acidosis","secondary_identifiers":["MEDGEN:460321","OMIM:605756","UMLS:C3148970"],"synonyms":[{"name":"gonadal dysgenesis, hypergonadotropic, 20 type, with short stature and recurrent metabolic acidosis","type":"related"},{"name":"ovarian dysgenesis, hypergonadotropic, with short stature and recurrent metabolic acidosis","type":"exact"}],"termid":"MONDO:0011594","xrefs":{"Monarch":{"xref_id":"0011594"}}}


id: GO:0031587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of the inositol 1,4,5-trisphosphate-sensitive calcium-release channel.","definition_xrefs":["GOC:signaling","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","termid":"GO:0031585"},{"relation_name":"is_a","term_name":"positive regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051281"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","synonyms":[{"name":"activation of IP3 receptor activity","type":"narrow"},{"name":"positive regulation of IP3 receptor activity","type":"exact"},{"name":"positive regulation of inositol-1,4,5-trisphosphate receptor activity","type":"exact"},{"name":"stimulation of IP3 receptor activity","type":"narrow"},{"name":"up regulation of IP3 receptor activity","type":"exact"},{"name":"up-regulation of IP3 receptor activity","type":"exact"},{"name":"upregulation of IP3 receptor activity","type":"exact"}],"termid":"GO:0031587"}


id: MONDO:1010100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare complication of hypothyroidism characterized by altered mental status, hypothermia, and symptoms related to the slowing of other organ systems.","definition_xrefs":["PMID:34194879","PMID:38279788","PMID:33083180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism","termid":"MONDO:0005420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myxedema coma","termid":"MONDO:1010100","xrefs":{"Monarch":{"xref_id":"1010100"}}}


id: FYPO:0000681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that has abnormal morphology and contains two diploid spores.","definition_xrefs":["PomBase:vw","PMID:11156975","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with fewer than four spores","termid":"FYPO:0003066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000121","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of two-spore ascus","synonyms":[{"name":"abnormal ascospore formation resulting in formation of two-spore ascus","type":"exact"},{"name":"abnormal sporulation resulting in formation of two-spore asci","type":"exact"}],"termid":"FYPO:0000681"}


id: PBO:0083292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps 5' end of the essential gene SPT6","termid":"PBO:0083292"}


id: PBO:0078615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64F, pseudogene","termid":"PBO:0078615"}


id: PBO:0045326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 5","termid":"PBO:0045326"}


id: GO:1905520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of presynaptic active zone assembly.","definition_xrefs":["GOC:TermGenie","PMID:15797875","GO_REF:0000058","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of presynaptic active zone assembly","termid":"GO:1905518"},{"relation_name":"is_a","term_name":"positive regulation of presynapse assembly","termid":"GO:1905608"},{"relation_name":"positively_regulates","term_name":"presynaptic active zone assembly","termid":"GO:1904071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of presynaptic active zone assembly","synonyms":[{"name":"activation of pre-synaptic active zone assembly","type":"narrow"},{"name":"activation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"activation of pre-synaptic active zone component formation","type":"narrow"},{"name":"activation of pre-synaptic active zone formation","type":"narrow"},{"name":"activation of presynaptic active zone assembly","type":"narrow"},{"name":"activation of presynaptic active zone formation","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"positive regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone formation","type":"exact"},{"name":"positive regulation of presynaptic active zone formation","type":"exact"},{"name":"up regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"up regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"up regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"up regulation of pre-synaptic active zone formation","type":"exact"},{"name":"up regulation of presynaptic active zone assembly","type":"exact"},{"name":"up regulation of presynaptic active zone formation","type":"exact"},{"name":"up-regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"up-regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"up-regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"up-regulation of pre-synaptic active zone formation","type":"exact"},{"name":"up-regulation of presynaptic active zone assembly","type":"exact"},{"name":"up-regulation of presynaptic active zone formation","type":"exact"},{"name":"upregulation of pre-synaptic active zone assembly","type":"exact"},{"name":"upregulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"upregulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"upregulation of pre-synaptic active zone formation","type":"exact"},{"name":"upregulation of presynaptic active zone assembly","type":"exact"},{"name":"upregulation of presynaptic active zone formation","type":"exact"}],"termid":"GO:1905520"}


id: PR:O14007
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23127:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.04c","secondary_identifiers":["UniProtKB:O14007"],"synonyms":[{"name":"SPAC29A4.04c","type":"related"},{"name":"Spom972h-DKC1","type":"exact"},{"name":"centromere-binding factor 5 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14007"}


id: GO:0060419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of the heart.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart growth","termid":"GO:0060419"}


id: GO:0007389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["ISBN:0521436125","GOC:isa_complete","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification process","synonyms":[{"name":"pattern biosynthesis","type":"related"},{"name":"pattern formation","type":"related"}],"termid":"GO:0007389"}


id: GO:0047435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-guanidino-2-oxopentanoate + H+ = 4-guanidinobutanal + CO2.","definition_xrefs":["EC:4.1.1.75","RHEA:11340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"5-guanidino-2-oxopentanoate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03178","MetaCyc:4.1.1.75-RXN"],"synonyms":[{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase (4-guanidinobutanal-forming)","type":"related"},{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase activity","type":"related"},{"name":"2-oxo-5-guanidinopentanoate decarboxylase activity","type":"related"},{"name":"2-oxo-5-guanidinovalerate alpha-ketoarginine decarboxylase activity","type":"related"},{"name":"alpha-ketoarginine decarboxylase activity","type":"related"}],"termid":"GO:0047435"}


id: GO:0090475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein processing achieved by the cleavage of a peptide bond after two consecutive lysine amino acid residues within a protein.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibasic protein processing","termid":"GO:0090472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"lys-lys specific dibasic protein processing","termid":"GO:0090475"}


id: PR:Q9P7M1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein dep1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.02c","synonyms":[{"name":"Spom972h-dep1","type":"exact"}],"termid":"PR:Q9P7M1"}


id: FYPO:0009048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cysteine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to cysteine","synonyms":[{"name":"resistance to cysteine during mitotic cell cycle","type":"related"},{"name":"resistance to cysteine during vegetative growth","type":"exact"},{"name":"resistant to cysteine","type":"exact"}],"termid":"FYPO:0009048"}


id: PBO:0027167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_premeiotic_DNA_replication_initiation","termid":"PBO:0027167"}


id: MOD:00600
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamate 5-ethyl ester.","definition_xrefs":["PubMed:9629898","DeltaMass:0","Unimod:280#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"ethylated residue","termid":"MOD:01339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid 5-ethyl ester","synonyms":[{"name":"Ethyl","type":"exact"},{"name":"Ethylation","type":"related"}],"termid":"MOD:00600"}


id: PR:000060258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe) that lacks phosphorylation on the residue at the position equivalent to Ser-52 of the amino acid sequence represented by UniProtKB:P56286. UniProtKB:P56286, Ser-52, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:28771613","PRO:DAN","PMID:31048492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tif211/UnPhos(S52)","pombase_gene_id":"SPAC3G9.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: eukaryotic translation initiation factor 2 subunit alpha unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-EIF2S1/UnPhos:1","type":"exact"},{"name":"Tif211/UnPhos(S52)","type":"exact"},{"name":"UniProtKB:P56286, Ser-52, PR:000026291","type":"narrow"},{"name":"UniProtKB:P56286-1, Ser-52, PR:000026291","type":"narrow"}],"termid":"PR:000060258"}


id: PBO:0070822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a","termid":"PBO:0070822"}


id: GO:0047521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-alpha,7-alpha,12-beta-trihydroxy-5-beta-cholanate + NADP+ = 3-alpha,7-alpha-dihydroxy-12-oxo-5-beta-cholanate + H+ + NADPH.","definition_xrefs":["RHEA:21424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"12-beta-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:12-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN","KEGG_REACTION:R03495","EC:1.1.1.238"],"synonyms":[{"name":"12beta-hydroxy steroid (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"broad"},{"name":"12beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12beta-hydroxysteroid:NADP+ 12-oxidoreductase activity","type":"broad"},{"name":"3alpha,7alpha,12beta-trihydroxy-5beta-cholanate dehydrogenase activity","type":"broad"}],"termid":"GO:0047521"}


id: GO:0042359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"vitamin D metabolic process","secondary_identifiers":["Reactome:R-HSA-196791"],"synonyms":[{"name":"calciferol metabolic process","type":"narrow"},{"name":"calciferol metabolism","type":"narrow"},{"name":"cholecalciferol metabolic process","type":"narrow"},{"name":"cholecalciferol metabolism","type":"narrow"},{"name":"ergocalciferol metabolic process","type":"narrow"},{"name":"ergocalciferol metabolism","type":"narrow"},{"name":"vitamin D metabolism","type":"exact"}],"termid":"GO:0042359"}


id: MONDO:0019224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An inherited metabolic disease that is has its basis in the disruption of gamma-aminobutyric acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"gene_count":0,"genotype_count":0,"name":"obsolete inborn disorder of gamma-aminobutyric acid metabolism (obsolete MONDO:0019224)","synonyms":[{"name":"disorder of GABA metabolism","type":"exact"},{"name":"disorder of gamma-aminobutyric acid metabolism","type":"related"},{"name":"inborn error of gamma-aminobutyric acid metabolic process","type":"exact"},{"name":"inborn gamma-aminobutyric acid metabolic process disorder","type":"exact"},{"name":"rare inborn error of gamma-aminobutyric acid metabolic process","type":"exact"}],"termid":"MONDO:0019224","xrefs":{"Monarch":{"xref_id":"0019224"}}}


id: PBO:0063905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIH1 domain containing 1","termid":"PBO:0063905"}


id: PBO:0056689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 10","termid":"PBO:0056689"}


id: PR:O94601
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ADP-ribosylation factor GTPase-activating protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C622.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.14","secondary_identifiers":["UniProtKB:O94601"],"synonyms":[{"name":"Spom972h-ARFGAP1","type":"exact"}],"termid":"PR:O94601"}


id: PATO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being a cupule, with a structure similar to a cup that also encloses the ovule in partiality.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cup-shaped","termid":"PATO:0002227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cupulate","termid":"PATO:0002342"}


id: PR:Q9P7M3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slx1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease subunit slx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.15","synonyms":[{"name":"Spom972h-slx1","type":"exact"}],"termid":"PR:Q9P7M3"}


id: PATO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's being incapable of being permeated or pervaded by a liquid (as by osmosis or diffusion).","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impermeable","termid":"PATO:0000983"}


id: MONDO:0003821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises from the ovary and is composed of tissues that originate from two or three of the following germ layers, endoderm, ectoderm, or mesoderm.","definition_xrefs":["NCIT:C39992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian teratoma","termid":"MONDO:0005602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian biphasic or triphasic teratoma","secondary_identifiers":["DOID:6232","MEDGEN:274086","UMLS:C1518691"],"synonyms":[{"name":"ovarian biphasic or triphasic teratoma","type":"exact"}],"termid":"MONDO:0003821","xrefs":{"Monarch":{"xref_id":"0003821"}}}


id: PR:Q10084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs2 gene.","definition_xrefs":["UniProtKB:Q10084","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter mfs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.05","synonyms":[{"name":"Spom972h-mfs2","type":"exact"}],"termid":"PR:Q10084"}


id: GO:0060459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a left lung from an initial condition to its mature state. This process begins with the formation of the left lung and ends with the mature structure. The left lung is the lung which is on the left side of the anterior posterior axis looking from a dorsal to ventral aspect.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left lung development","synonyms":[{"name":"left pulmonary development","type":"exact"}],"termid":"GO:0060459"}


id: PATO:0000492
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000492 absolute rhythym value (obsolete PATO:0000492)","termid":"PATO:0000492"}


id: MONDO:0005340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loss of scalp and body hair involving microscopically inflammatory patchy areas.","definition_xrefs":["MESH:D000506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia areata","secondary_identifiers":["ICD10CM:L63","SCTID:68225006","EFO:0004192","ICD9:704.01","icd11.foundation:65720611","MEDGEN:213","UMLS:C0002171","DOID:986","GARD:5782"],"synonyms":[{"name":"alopecia areata","type":"exact"},{"name":"alopecia circumscripta","type":"related"},{"name":"circumscribed alopecia","type":"exact"},{"name":"patchy loss of hair","type":"related"}],"termid":"MONDO:0005340","xrefs":{"Monarch":{"xref_id":"0005340"}}}


id: PBO:0066798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 97","termid":"PBO:0066798"}


id: PBO:0005597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor eEF3","termid":"PBO:0005597"}


id: PBO:0048822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 7","termid":"PBO:0048822"}


id: PBO:0047235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member G","termid":"PBO:0047235"}


id: PBO:0005845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinephosphate cytidylyltransferase (predicted)","termid":"PBO:0005845"}


id: GO:0061560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a cranial ganglion. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion formation","termid":"GO:0061554"},{"relation_name":"part_of","term_name":"cranial ganglion morphogenesis","termid":"GO:0061559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion formation","synonyms":[{"name":"cranial ganglia formation","type":"related"}],"termid":"GO:0061560"}


id: PBO:0071695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 1","termid":"PBO:0071695"}


id: GO:0034764
data:
  {"annotated_genes":["SJAG_02605","SJAG_00991","SJAG_05346","SJAG_04551","SJAG_04920","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[90251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[92065,93657,99200,110867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[99201,93658,92066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[93659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_04551":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of transmembrane transport","type":"narrow"},{"name":"positive regulation of membrane transport","type":"exact"},{"name":"stimulation of transmembrane transport","type":"narrow"},{"name":"up regulation of transmembrane transport","type":"exact"},{"name":"up-regulation of transmembrane transport","type":"exact"},{"name":"upregulation of transmembrane transport","type":"exact"}],"termid":"GO:0034764","terms_by_termid":{"GO:0035432":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905665":null}}


id: PR:Q9P7X3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- frg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7X3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein frg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.12","synonyms":[{"name":"Spom972h-frg1","type":"exact"}],"termid":"PR:Q9P7X3"}


id: PATO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a surface by virtue of the bearer's being marked by the presence of small, shallow, regular depressions called fovae.","definition_xrefs":["Book:Book"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foveate","synonyms":[{"name":"foveolate","type":"related"},{"name":"pitted","type":"related"}],"termid":"PATO:0002296"}


id: PBO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DDHD family phospholipase (predicted)","termid":"PBO:0000950"}


id: GO:0046486
data:
  {"annotated_genes":["SJAG_01918","SJAG_01863","SJAG_02902","SJAG_00296","SJAG_04628","SJAG_03563","SJAG_06425","SJAG_04323","SJAG_03154","SJAG_01148","SJAG_02683","SJAG_02487","SJAG_01957","SJAG_02907","SJAG_02328","SJAG_04924","SJAG_00946","SJAG_02100","SJAG_01227","SJAG_03292","SJAG_05327","SJAG_02089","SJAG_04337","SJAG_02613","SJAG_04883","SJAG_02091","SJAG_06383","SJAG_00825","SJAG_02763","SJAG_02543","SJAG_03801","SJAG_01860","SJAG_03131","SJAG_00426","SJAG_05330","SJAG_00638","SJAG_02161","SJAG_03162","SJAG_04319","SJAG_00846","SJAG_00295","SJAG_01570","SJAG_03204","SJAG_01416","SJAG_02913","SJAG_02776","SJAG_02488","SJAG_04975","SJAG_03609","SJAG_00053","SJAG_04110","SJAG_01876","SJAG_02665","SJAG_03375","SJAG_04119","SJAG_04545","SJAG_02289","SJAG_00622","SJAG_03115","SJAG_04792","SJAG_00831","SJAG_02980","SJAG_04165","SJAG_03170","SJAG_01519","SJAG_00812","SJAG_01233","SJAG_04041","SJAG_04930","SJAG_03524","SJAG_01571","SJAG_02321","SJAG_03700","SJAG_00999","SJAG_04537","SJAG_02654","SJAG_04317","SJAG_03878","SJAG_03604","SJAG_01236","SJAG_00168","SJAG_03076","SJAG_02093","SJAG_04881","SJAG_03935","SJAG_00063","SJAG_00114","SJAG_03506","SJAG_02523","SJAG_03672","SJAG_01036","SJAG_00506","SJAG_05278","SJAG_02804","SJAG_00068","SJAG_03066"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[71404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035965"},{"annotations":[80398,71629,118178,93367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"},{"annotations":[57070,61461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006657"},{"annotations":[113348,115008,119861,80395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"},{"annotations":[114514,112393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046339"},{"annotations":[71736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046474"},{"annotations":[71909,78887,77739,98092,76836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046475"},{"annotations":[58330,77820,75867,75301,72157,57869,63357,87751,76777,60781,93322,75896,70170,78204,77491,77991,62702,73849,58340,73476,104028,76793,58226,63750,89876,104090,78230,77812,78565,73068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[74087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"},{"annotations":[104694,90736],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[71998,71862,78101,105212,62417,93384,71405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006654"},{"annotations":[72794,93385,104652,96738,78595,94974,70654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006656"},{"annotations":[117306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034638"},{"annotations":[75710,79471,73884,104294,93386,71375,62175,67426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006646"},{"annotations":[72230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036149"},{"annotations":[92958,76922,117335,119154,80581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006661"},{"annotations":[113888,96251,63880,60291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046488"},{"annotations":[118795,91542,93551,111462,97020,111586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[71773,63332,61804,61654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[67425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[74751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"},{"annotations":[101736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006658"},{"annotations":[117862],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902648"},{"annotations":[90358,71614,77302,74888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[92217,98789,117914,71857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[93998,115123,90439,92218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerolipids, any lipid with a glycerol backbone. 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id: FYPO:0007230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell grows in the form of a spindle, i.e. both cell tips are narrower and more pointed than normal.","definition_xrefs":["PomBase:mah","PMID:22137473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"spindle-shaped cell","synonyms":[{"name":"spindle-shaped cell during mitotic cell cycle","type":"related"},{"name":"spindle-shaped cell during vegetative growth","type":"exact"},{"name":"spindle-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0007230"}


id: MONDO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated dystonia","termid":"MONDO:0015494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"generalized dystonia","secondary_identifiers":["UMLS:C1848954","DOID:0050835","MEDGEN:341342","SCTID:425492002","ICD9:333.89","ICD9:333.6","ICD9:333.8","GARD:21618","MESH:D004422","Orphanet:376724"],"synonyms":[{"name":"Idiopathic torsion dystonia","type":"related"},{"name":"Idiopathic torsion dystonias","type":"related"},{"name":"Oppenheim Ziehen disease","type":"related"},{"name":"Oppenheim-Ziehen disease","type":"related"},{"name":"Progressive torsion spasm","type":"related"},{"name":"childhood torsion disease","type":"related"},{"name":"dystonia 12","type":"related"},{"name":"dystonia deformans musculorum","type":"related"},{"name":"dystonia deformans progressiva","type":"exact"},{"name":"dystonia musculorum deformans","type":"related"},{"name":"dystonia, Idiopathic torsion","type":"related"},{"name":"dystonias, Idiopathic torsion","type":"related"},{"name":"dystonias, torsion","type":"related"},{"name":"familial dystonia","type":"related"},{"name":"fragments of torsion dystonia","type":"related"},{"name":"generalised isolated dystonia","type":"exact"},{"name":"generalized isolated dystonia","type":"exact"},{"name":"idiopathic familial dystonia","type":"related"},{"name":"idiopathic non-familial dystonia","type":"related"},{"name":"idiopathic torsion dystonia","type":"related"},{"name":"spasm, Progressive torsion","type":"related"},{"name":"symptomatic torsion dystonia","type":"related"},{"name":"torsion disease of childhood","type":"related"},{"name":"torsion disease, childhood","type":"related"},{"name":"torsion dystonia","type":"related"},{"name":"torsion dystonia, Idiopathic","type":"related"},{"name":"torsion spasm, Progressive","type":"related"}],"termid":"MONDO:0000476","xrefs":{"Monarch":{"xref_id":"0000476"}}}


id: PBO:0064563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraoxonase 1","termid":"PBO:0064563"}


id: MONDO:0018222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked intellectual disability due to GRIA3 anomalies (obsolete MONDO:0018222)","secondary_identifiers":["Orphanet:364028"],"termid":"MONDO:0018222","xrefs":{"Monarch":{"xref_id":"0018222"}}}


id: PBO:0088893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ubiquitin-protein ligase E3 involved in peroxisome organization and biogenesis","termid":"PBO:0088893"}


id: PBO:0059485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase B1","termid":"PBO:0059485"}


id: PBO:0078951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 3-1","termid":"PBO:0078951"}


id: GO:0102916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + (+)-piperitol + NADPH + O2 = (+)-sesamin + NADP + 2 H2O.","definition_xrefs":["GOC:pz","PMID:16785429"],"gene_count":0,"genotype_count":0,"name":"obsolete sesamin synthase activity (obsolete GO:0102916)","termid":"GO:0102916"}


id: PBO:0051015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 2","termid":"PBO:0051015"}


id: PBO:0090761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL family protein Orm1","termid":"PBO:0090761"}


id: GO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin assembly complex (obsolete GO:0005678)","synonyms":[{"name":"chromatin assembly complex","type":"exact"},{"name":"nucleosome assembly complex","type":"narrow"}],"termid":"GO:0005678"}


id: MONDO:0024878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from a pre-existing lower grade epithelial lesion, or as a result of a primary carcinoma that has spread to secondary sites, or due to a complication of a cancer treatment.","definition_xrefs":["NCIT:C36310"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"secondary malignant neoplasm","termid":"MONDO:0024881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"secondary carcinoma","secondary_identifiers":["MEDGEN:88450","UMLS:C0085668"],"synonyms":[{"name":"secondary carcinoma","type":"exact"}],"termid":"MONDO:0024878","xrefs":{"Monarch":{"xref_id":"0024878"}}}


id: MONDO:0006054
data:
  {"annotated_genes":["SJAG_01419","SJAG_01156","SJAG_03429","SJAG_02748","SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[85371,87586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[87447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"},{"annotations":[87637,87638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm affecting the male and female reproductive system.","definition_xrefs":["NCIT:C3674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_01156":null,"SJAG_01419":null,"SJAG_02748":null,"SJAG_03429":null,"SJAG_04885":null},"genotype_count":0,"is_obsolete":false,"name":"reproductive system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000051","MEDGEN:64246","UMLS:C0178830"],"synonyms":[{"name":"neoplasm of reproductive system","type":"exact"},{"name":"neoplasm of the reproductive system","type":"exact"},{"name":"reproductive neoplasm","type":"exact"},{"name":"reproductive system neoplasm","type":"exact"},{"name":"reproductive system neoplasm (disease)","type":"exact"},{"name":"reproductive system tumor","type":"exact"},{"name":"reproductive system tumour","type":"exact"},{"name":"reproductive tumor","type":"exact"},{"name":"reproductive tumour","type":"exact"},{"name":"tumor of reproductive system","type":"exact"},{"name":"tumor of the reproductive system","type":"exact"},{"name":"tumour of reproductive system","type":"exact"},{"name":"tumour of the reproductive system","type":"exact"}],"termid":"MONDO:0006054","terms_by_termid":{"MONDO:0009050":null,"MONDO:0011962":null,"MONDO:0013872":null,"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0006054"}}}


id: GO:0009382
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses imidazoleglycerol-phosphate synthase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"imidazoleglycerol-phosphate synthase complex","synonyms":[{"name":"imidazoleglycerol phosphate synthase complex","type":"exact"}],"termid":"GO:0009382"}


id: GO:0003955
data:
  {"annotated_genes":["SJAG_02697"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78775],"is_not":false,"summary":null,"term":"GO:0003955"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a quinol.","definition_xrefs":["EC:1.6.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"NAD(P)H dehydrogenase (quinone) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:NQOR-RXN","UM-BBD_reactionID:r0227"],"synonyms":[{"name":"DT-diaphorase activity","type":"related"},{"name":"NAD(P)H dehydrogenase activity","type":"broad"},{"name":"NAD(P)H menadione reductase activity","type":"broad"},{"name":"NAD(P)H(2) dehydrogenase (quinone) activity","type":"related"},{"name":"NAD(P)H-quinone dehydrogenase activity","type":"related"},{"name":"NAD(P)H-quinone oxidoreductase activity","type":"related"},{"name":"NAD(P)H2 dehydrogenase (quinone)","type":"related"},{"name":"NAD(P)H: menadione oxidoreductase activity","type":"broad"},{"name":"NAD(P)H:(quinone-acceptor)oxidoreductase activity","type":"related"},{"name":"NAD(P)H:quinone oxidoreductase activity","type":"related"},{"name":"NADH-menadione reductase activity","type":"narrow"},{"name":"NQO1","type":"related"},{"name":"QR1","type":"related"},{"name":"azoreductase activity","type":"broad"},{"name":"dehydrogenase, reduced nicotinamide adenine dinucleotide (phosphate, quinone) activity","type":"related"},{"name":"diaphorase activity","type":"broad"},{"name":"flavoprotein NAD(P)H-quinone reductase activity","type":"related"},{"name":"menadione oxidoreductase activity","type":"narrow"},{"name":"menadione reductase activity","type":"narrow"},{"name":"naphthoquinone reductase activity","type":"narrow"},{"name":"p-benzoquinone reductase activity","type":"narrow"},{"name":"phylloquinone reductase activity","type":"narrow"},{"name":"quinone reductase activity","type":"related"},{"name":"reduced NAD(P)H dehydrogenase activity","type":"related"},{"name":"reduced nicotinamide-adenine dinucleotide (phosphate) dehydrogenase activity","type":"related"},{"name":"viologen accepting pyridine nucleotide oxidoreductase activity","type":"narrow"},{"name":"vitamin K reductase activity","type":"narrow"},{"name":"vitamin-K reductase activity","type":"narrow"}],"termid":"GO:0003955","terms_by_termid":{"GO:0003955":null}}


id: MONDO:0009340
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86791,86792],"is_not":false,"summary":null,"term":"MONDO:0009340"}]},"cv_name":"mondo","definition":"Nonspherocytic hemolytic anemia due to hexokinase deficiency (NSHA due to HK1 deficiency) is a very rare conditionmainly characterized by severe, chronic hemolysis, beginning in infancy. Approximately 20 cases of this condition have been described to date. Signs and symptoms of hexokinase deficiency are very similar to those of pyruvate kinase deficiency but anemia is generally more severe. Some affected individuals reportedly have had various abnormalities in addition to NSHA including multiple malformations, panmyelopathy, and latent diabetes.Itcan be caused by mutations in the HK1 gene and is inherited in an autosomal recessive manner. Treatment may include red cell transfusions for those with severe anemia.","definition_xrefs":["GARD:0003672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005570","MONDO:0002280","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"non-spherocytic hemolytic anemia due to hexokinase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:90031","MESH:C562995","MEDGEN:461693","GARD:3672","OMIM:235700","UMLS:C3150343"],"synonyms":[{"name":"hemolytic anaemia due to hexokinase deficiency","type":"exact"},{"name":"hemolytic anemia due to hexokinase deficiency","type":"exact"},{"name":"hemolytic anemia, nonspherocytic, due to hexokinase deficiency","type":"related"},{"name":"hexokinase deficiency hemolytic anaemia","type":"related"},{"name":"hexokinase deficiency hemolytic anemia","type":"related"},{"name":"nonspherocytic hemolytic anaemia due to hexokinase deficiency","type":"related"},{"name":"nonspherocytic hemolytic anemia due to hexokinase deficiency","type":"related"}],"termid":"MONDO:0009340","terms_by_termid":{"MONDO:0009340":null},"xrefs":{"Monarch":{"xref_id":"0009340"}}}


id: CHEBI:50398
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinamic acid","termid":"CHEBI:50398"}


id: PBO:0091567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, LTR associated","termid":"PBO:0091567"}


id: GO:0048859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the limits of an anatomical structure are generated. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of anatomical boundary","termid":"GO:0048859"}


id: GO:0019903
data:
  {"annotated_genes":["SJAG_04638"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63630],"is_not":false,"summary":null,"term":"GO:0019903"}]},"cv_name":"molecular_function","definition":"Binding to a protein phosphatase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase binding","termid":"GO:0019902"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein phosphatase binding","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0019903","terms_by_termid":{"GO:0019903":null}}


id: GO:0051966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, glutamatergic","termid":"GO:0035249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic transmission, glutamatergic","termid":"GO:0051966"}


id: PBO:0060195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 16, cell surface associated","termid":"PBO:0060195"}


id: GO:0072060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the outer medullary collecting duct over time, from its formation to the mature structure. The outer medullary collecting duct is the portion of the collecting duct that lies in the renal outer medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collecting duct development","termid":"GO:0072044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer medullary collecting duct development","termid":"GO:0072060"}


id: PBO:0078856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 4","termid":"PBO:0078856"}


id: PBO:0054847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2261","termid":"PBO:0054847"}


id: PBO:0064685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 21","termid":"PBO:0064685"}


id: GO:1990546
data:
  {"annotated_genes":["SJAG_00275","SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71868,72875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"}]},"cv_name":"biological_process","definition":"The process in which a tricarboxylic acid is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid transmembrane transport","termid":"GO:0035674"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tricarboxylic acid transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990546","terms_by_termid":{"GO:0006843":null}}


id: MONDO:0004869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A varicose disease that involves the pelvic region of trunk.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"varicose disease","termid":"MONDO:0008638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic varices","secondary_identifiers":["SCTID:17406005","UMLS:C0155795","DOID:9742","ICD9:456.5","MEDGEN:510082","ICD10CM:I86.2","icd11.foundation:1717989511"],"synonyms":[{"name":"pelvic region of trunk varicose disease","type":"exact"},{"name":"varicose disease of pelvic region of trunk","type":"exact"}],"termid":"MONDO:0004869","xrefs":{"Monarch":{"xref_id":"0004869"}}}


id: MONDO:0034676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare overgrowth syndrome with skeletal involvement characterized by long and slim body habitus and multiple skeletal manifestations, such as scoliosis, macrodactyly of the big toes, arachnodactyly of fingers and toes, camptodactyly and clinodactyly, and progressive valgus deformities of the feet. Epimetaphyseal dysplasia, bowing of the tibiae, and dysmorphic facial features (hypertelorism, high palate, or micrognathia), as well as aortic root dilatation and umbilical hernia have also been reported.","definition_xrefs":["Orphanet:498488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overgrowth syndrome with 2q37 translocation","secondary_identifiers":["UMLS:C5567236","GARD:22032","MEDGEN:1798659"],"termid":"MONDO:0034676","xrefs":{"Monarch":{"xref_id":"0034676"}}}


id: PBO:0005093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAZ domain","termid":"PBO:0005093"}


id: GO:0098755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which seed dormancy is maintained by the presence of absisic acid.","definition_xrefs":["GOC:dos","PMID:9580097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of seed dormancy","termid":"GO:0010231"},{"relation_name":"part_of","term_name":"response to abscisic acid","termid":"GO:0009737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of seed dormancy by absisic acid","termid":"GO:0098755"}


id: PBO:0029518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_shape","termid":"PBO:0029518"}


id: PBO:0069340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 600, pseudogene","termid":"PBO:0069340"}


id: GO:0045742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042058"},{"relation_name":"is_a","term_name":"positive regulation of ERBB signaling pathway","termid":"GO:1901186"},{"relation_name":"positively_regulates","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of epidermal growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-8849469"],"synonyms":[{"name":"activation of epidermal growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of EGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of EGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of EGFR signaling pathway","type":"exact"},{"name":"stimulation of epidermal growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of epidermal growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0045742"}


id: PBO:0045438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 3","termid":"PBO:0045438"}


id: PBO:0056087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 96","termid":"PBO:0056087"}


id: PBO:0047086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member E, pseudogene","termid":"PBO:0047086"}


id: GO:0051470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ectoine across a membrane by means of some agent such as a transporter or a pore. Ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid) is a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"ectoine transmembrane transport","synonyms":[{"name":"ectoine transport","type":"related"}],"termid":"GO:0051470"}


id: GO:0048006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen of endogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["PMID:10375559","GOC:add","PMID:15928678","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous antigen","termid":"GO:0019883"},{"relation_name":"is_a","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation, endogenous lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, endogenous lipid antigen","type":"exact"},{"name":"endogenous lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048006"}


id: FYPO:0009040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tea tree oil than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to tea tree oil","synonyms":[{"name":"resistance to tea tree oil during mitotic cell cycle","type":"related"},{"name":"resistance to tea tree oil during vegetative growth","type":"exact"},{"name":"resistant to tea tree oil","type":"exact"}],"termid":"FYPO:0009040"}


id: MOD:01700
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds a proton to a residue alpha-amnino or alpha-imino group forming an alpha-aminium or alpha-iminium group, respectively.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protonated residue","termid":"MOD:01699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino protonated residue","synonyms":[{"name":"N2H+NRes","type":"exact"}],"termid":"MOD:01700"}


id: GO:1903765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion export across the plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","PMID:19646991","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transport","termid":"GO:1901380"},{"relation_name":"is_a","term_name":"regulation of potassium ion export across plasma membrane","termid":"GO:1903764"},{"relation_name":"negatively_regulates","term_name":"potassium ion export across plasma membrane","termid":"GO:0097623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of potassium ion export across plasma membrane","secondary_identifiers":["GO:1902303"],"synonyms":[{"name":"down regulation of potassium export","type":"broad"},{"name":"down regulation of potassium ion export","type":"broad"},{"name":"down regulation of potassium ion export across plasma membrane","type":"exact"},{"name":"down-regulation of potassium export","type":"broad"},{"name":"down-regulation of potassium ion export","type":"broad"},{"name":"down-regulation of potassium ion export across plasma membrane","type":"exact"},{"name":"downregulation of potassium export","type":"broad"},{"name":"downregulation of potassium ion export","type":"broad"},{"name":"downregulation of potassium ion export across plasma membrane","type":"exact"},{"name":"inhibition of potassium export","type":"narrow"},{"name":"inhibition of potassium ion export","type":"related"},{"name":"inhibition of potassium ion export across plasma membrane","type":"exact"},{"name":"negative regulation of potassium export","type":"broad"},{"name":"negative regulation of potassium ion export","type":"broad"}],"termid":"GO:1903765"}


id: MONDO:1040037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by autosomal recessive variants in the IMPG1 gene.","definition_xrefs":["PMID:23993198","PMID:28644393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"IMPG1-related recessive retinopathy","synonyms":[{"name":"IMPG1-related recessive retinopathy","type":"exact"}],"termid":"MONDO:1040037","xrefs":{"Monarch":{"xref_id":"1040037"}}}


id: GO:1900618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot morphogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"shoot system morphogenesis","termid":"GO:0010016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system morphogenesis","synonyms":[{"name":"regulation of shoot morphogenesis","type":"exact"}],"termid":"GO:1900618"}


id: PBO:0027974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cysteine-type_peptidase_activity","termid":"PBO:0027974"}


id: GO:0004709
data:
  {"annotated_genes":["SJAG_01718","SJAG_04777","SJAG_03384","SJAG_03753"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87859,92589,101224,106608],"is_not":false,"summary":null,"term":"GO:0004709"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation and activation of a MAP kinase kinase; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases.","definition_xrefs":["PMID:9561267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01718":null,"SJAG_03384":null,"SJAG_03753":null,"SJAG_04777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0016301","GO:0016740","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"MAP kinase kinase kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2730887","Reactome:R-HSA-451649","Reactome:R-HSA-727819","Reactome:R-HSA-933530","GO:0004710","EC:2.7.11.25","Reactome:R-HSA-392530","MetaCyc:2.7.11.25-RXN"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKKKK-activated) activity","type":"related"},{"name":"MAP3K","type":"related"},{"name":"MAPK/ERK kinase kinase activity","type":"exact"},{"name":"MAPKKK activity","type":"related"},{"name":"MEK kinase activity","type":"related"},{"name":"MEKK","type":"related"},{"name":"MEKK activity","type":"exact"},{"name":"MEKK1","type":"related"},{"name":"MEKK2","type":"related"},{"name":"MEKK3","type":"related"},{"name":"MLK-like mitogen-activated protein triple kinase activity","type":"narrow"},{"name":"MLTK","type":"related"},{"name":"MLTKa","type":"related"},{"name":"MLTKb","type":"related"},{"name":"Mil/Raf","type":"related"},{"name":"REKS","type":"related"},{"name":"STK28","type":"related"},{"name":"cMos","type":"related"},{"name":"cRaf","type":"related"},{"name":"mitogen-activated protein kinase kinase kinase activity","type":"related"}],"termid":"GO:0004709","terms_by_termid":{"GO:0004709":null}}


id: GO:0090333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of stomatal closure. Stomatal closure is the process of closing of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stomatal movement","termid":"GO:0010119"},{"relation_name":"regulates","term_name":"stomatal closure","termid":"GO:0090332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal closure","termid":"GO:0090333"}


id: PR:O14030
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr5 gene.","definition_xrefs":["UniProtKB:O14030","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B12.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.08","synonyms":[{"name":"Spom972h-clr5","type":"exact"}],"termid":"PR:O14030"}


id: MONDO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome Xq duplication is a chromosome abnormality that affects many different parts of the body. People with this condition have an extra copy of the genetic material located on the long arm (q) of the X chromosome in each cell. The severity of the condition and the associated signs and symptoms vary based on the size and location of theduplication;the genes involved; and the sex of the affected person. In general, males are typically more severely affected than females and often experience intellectual disability, developmental delay, short stature, abnormalities of the reproductive organs, anddistinctive craniofacial features. Many females with this duplication do not have any symptoms or are only affected with short stature; however, some may be just as severely affected as males with the condition. Most cases are inherited in an X-linked manner, often from a mother with no signs or symptoms of the condition. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome X","termid":"MONDO:0017008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome X","secondary_identifiers":["MESH:C536732","MEDGEN:162887","Orphanet:263783","UMLS:C0795891","GARD:5369"],"synonyms":[{"name":"Duplication Xq","type":"related"},{"name":"Xq duplication","type":"related"},{"name":"Xq trisomy","type":"related"},{"name":"chromosome Xq duplication","type":"related"},{"name":"partial duplication of chromosome Xq","type":"exact"},{"name":"partial duplication of the long arm of chromosome type X","type":"exact"},{"name":"partial trisomy Xq","type":"related"},{"name":"partial trisomy of chromosome Xq","type":"exact"},{"name":"partial trisomy of the long arm of chromosome X","type":"exact"},{"name":"trisomy Xq","type":"related"}],"termid":"MONDO:0017010","xrefs":{"Monarch":{"xref_id":"0017010"}}}


id: PBO:0050168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 24","termid":"PBO:0050168"}


id: FYPO:0000326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the stable attachment of sister chromatids to microtubules emanating from opposite poles of the mitotic spindle during metaphase plate congression is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000337","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid biorientation","synonyms":[{"name":"abnormal sister chromatid biorientation during mitosis","type":"exact"},{"name":"abnormal sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid biorientation during vegetative growth","type":"exact"}],"termid":"FYPO:0000326"}


id: GO:0018392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP-L-fucose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-[alpha-L-fucosyl-(1->3)]-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP + H+.","definition_xrefs":["EC:2.4.1.214","RHEA:24444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->3)-fucosyltransferase activity","termid":"GO:0046920"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glycoprotein 3-alpha-L-fucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.214-RXN","KEGG_REACTION:R06015"],"synonyms":[{"name":"GDP-L-Fuc:Asn-linked GlcNAc alpha-1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:Asn-linked GlcNAc alpha1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-fucose:asparagine-linked N-acetylglucosamine alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of 4-N-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity","type":"related"},{"name":"GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of N4-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fuc-alpha-1->6-GlcNAc)-Asn-peptide) alpha-1->3-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6-GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity","type":"related"}],"termid":"GO:0018392"}


id: PBO:0050257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 35","termid":"PBO:0050257"}


id: PBO:0040533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-N-acetylgalactosaminyltransferase 2 pseudogene 1","termid":"PBO:0040533"}


id: GO:0009074
data:
  {"annotated_genes":["SJAG_02734","SJAG_03312","SJAG_04842","SJAG_03743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76996],"is_not":false,"summary":null,"term":"GO:0009074"},{"annotations":[71878,71521,74212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03312":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aromatic amino acid family breakdown","type":"exact"},{"name":"aromatic amino acid family catabolism","type":"exact"},{"name":"aromatic amino acid family degradation","type":"exact"}],"termid":"GO:0009074","terms_by_termid":{"GO:0000949":null,"GO:0009074":null}}


id: RO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x anabranch_of y if x is a distributary of y (i.e. it channels a from a larger flow from y) and x ultimately channels the flow back into y.","direct_ancestors":[{"relation_name":"is_a","term_name":"distributary_of","termid":"RO:0002377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anabranch_of","termid":"RO:0002378"}


id: GO:0007535
data:
  {"annotated_genes":["SJAG_02319","SJAG_01495","SJAG_01601","SJAG_01068"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88248,99440,117177,119175],"is_not":false,"summary":null,"term":"GO:0007535"}]},"cv_name":"biological_process","definition":"The process that determines which donor locus a cell uses, in preference to another, in mating type switching.","definition_xrefs":["PMID:9928492","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01068":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_02319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"donor selection","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"donor preference","type":"related"}],"termid":"GO:0007535","terms_by_termid":{"GO:0007535":null}}


id: MONDO:0007791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial hypocalciuric hypercalcemia in which the cause of the disease is a mutation in the CASR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypocalciuric hypercalcemia","termid":"MONDO:0018458"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial hypocalciuric hypercalcemia 1","secondary_identifiers":["Orphanet:93372","MESH:C537145","SCTID:704166007","DOID:0060700","MedDRA:10068704","MEDGEN:137973","OMIM:145980","GARD:2796","UMLS:C0342637"],"synonyms":[{"name":"hypocalciuric hypercalcemia, familial, type 1","type":"related"},{"name":"hypocalciuric hypercalcemia, familial, type I","type":"related"},{"name":"CASR familial hypocalciuric hypercalcemia","type":"exact"},{"name":"FBH1","type":"related"},{"name":"FHH type 1","type":"exact"},{"name":"Fhh1","type":"related"},{"name":"HHC1","type":"exact"},{"name":"familial benign hypercalcemia 1","type":"exact"},{"name":"familial benign hypercalcemia type 1","type":"related"},{"name":"familial hypocalciuric hypercalcemia caused by mutation in CASR","type":"exact"},{"name":"familial hypocalciuric hypercalcemia type 1","type":"exact"},{"name":"familial hypocalciuric hypercalcemia type I","type":"exact"},{"name":"hpocalciuric hypercalcemia, type I","type":"exact"},{"name":"hypercalcemia, familial benign","type":"related"},{"name":"hypercalcemia, familial benign type 1","type":"related"},{"name":"hypocalciuric hypercalcemia type I","type":"exact"},{"name":"hypocalciuric hypercalcemia, acquired","type":"related"}],"termid":"MONDO:0007791","xrefs":{"Monarch":{"xref_id":"0007791"}}}


id: GO:0016553
data:
  {"annotated_genes":["SJAG_04380","SJAG_04189","SJAG_00352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101433,59297,74040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002100"}]},"cv_name":"biological_process","definition":"Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s).","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"base conversion or substitution editing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"base conversion/substitution editing","type":"exact"}],"termid":"GO:0016553","terms_by_termid":{"GO:0002100":null}}


id: SO:0001227
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by histone deacetylation.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_histone_deacetylation","termid":"SO:0001223"},{"relation_name":"is_a","term_name":"gene_silenced_by_histone_modification","termid":"SO:0001225"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_histone_deacetylation","synonyms":[{"name":"gene silenced by histone deacetylation","type":"exact"}],"termid":"SO:0001227"}


id: PBO:0071665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 6","termid":"PBO:0071665"}


id: PBO:0074038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 23","termid":"PBO:0074038"}


id: PBO:0060366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenin promoter associated myogenic regulatory antisense long non coding RNA","termid":"PBO:0060366"}


id: PBO:0055228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2654","termid":"PBO:0055228"}


id: PBO:0088771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"con-6 family conserved fungal protein","termid":"PBO:0088771"}


id: PBO:0063682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 6","termid":"PBO:0063682"}


id: PBO:0047583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 3","termid":"PBO:0047583"}


id: PBO:0049634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 37","termid":"PBO:0049634"}


id: PBO:0060744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B1","termid":"PBO:0060744"}


id: PBO:0074425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 24","termid":"PBO:0074425"}


id: GO:0102551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + H+ + homogentisate = 6-geranylgeranyl-2-methylbenzene-1,4-diol + CO2 + diphosphate.","definition_xrefs":["GOC:pz","EC:2.5.1.116"],"gene_count":0,"genotype_count":0,"name":"obsolete homogentisate geranylgeranyl transferase activity (obsolete GO:0102551)","termid":"GO:0102551"}


id: MONDO:0016792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxidative phosphorylation disorder due to a large-scale single deletion of mitochondrial DNA (obsolete MONDO:0016792)","secondary_identifiers":["Orphanet:254767"],"synonyms":[{"name":"OXPHOS disease due to a large-scale single deletion of mitochondrial DNA","type":"exact"},{"name":"OXPHOS disease due to a large-scale single deletion of mtDNA","type":"exact"},{"name":"mitochondrial oxidative phosphorylation disorder due to a large-scale single deletion of mtDNA","type":"exact"}],"termid":"MONDO:0016792","xrefs":{"Monarch":{"xref_id":"0016792"}}}


id: GO:0042783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which an organism avoids the effects of the host organism's immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mb","PMID:12439615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"},{"relation_name":"is_a","term_name":"response to host immune response","termid":"GO:0052572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of host immune response","secondary_identifiers":["GO:0051805","GO:0020012","GO:0051809","GO:0042782","GO:0051810"],"synonyms":[{"name":"active evasion of host immune response","type":"related"},{"name":"active evasion of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion","type":"broad"},{"name":"evasion by virus of host immune response","type":"related"},{"name":"evasion of host immune response","type":"exact"},{"name":"evasion or tolerance of host immune response","type":"broad"},{"name":"immune evasion","type":"exact"},{"name":"mitigation by virus of host immune response","type":"related"},{"name":"mitigation of host immune response","type":"related"},{"name":"mitigation of host immune response by virus","type":"related"},{"name":"passive evasion of host immune response","type":"related"},{"name":"passive evasion of immune response of other organism involved in symbiotic interaction","type":"related"},{"name":"passive immune evasion","type":"related"},{"name":"suppression by virus of host immune response","type":"related"}],"termid":"GO:0042783"}


id: GO:0009095
data:
  {"annotated_genes":["SJAG_04652","SJAG_03124","SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98667,78248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[76995,79103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenylalanine and tyrosine from other compounds, including chorismate, via the intermediate prephenate.","definition_xrefs":["GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03124":null,"SJAG_03312":null,"SJAG_04652":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aromatic amino acid family biosynthetic process, prephenate pathway","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"aromatic amino acid family anabolism, prephenate pathway","type":"exact"},{"name":"aromatic amino acid family biosynthetic process via prephenate","type":"exact"},{"name":"aromatic amino acid family biosynthetic process via prephenate(2-)","type":"exact"},{"name":"aromatic amino acid family formation, prephenate pathway","type":"exact"},{"name":"aromatic amino acid family synthesis, prephenate pathway","type":"exact"}],"termid":"GO:0009095","terms_by_termid":{"GO:0006571":null,"GO:0009094":null}}


id: PBO:0074965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-7","termid":"PBO:0074965"}


id: PBO:0058689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6817","termid":"PBO:0058689"}


id: PBO:0067711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 9","termid":"PBO:0067711"}


id: PBO:0063773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 5A","termid":"PBO:0063773"}


id: MONDO:0012623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 4","secondary_identifiers":["DOID:0081187","MESH:C567008","MEDGEN:370844","UMLS:C1970179","OMIM:611107","GARD:22547"],"synonyms":[{"name":"MRT4","type":"exact"},{"name":"intellectual disability, autosomal recessive 4","type":"exact"},{"name":"mental retardation, autosomal recessive 4","type":"related"},{"name":"mental retardation, autosomal recessive, 4","type":"exact"}],"termid":"MONDO:0012623","xrefs":{"Monarch":{"xref_id":"0012623"}}}


id: GO:0046778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that interferes with the processing of mRNA in the host cell.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by virus of host mRNA processing (obsolete GO:0046778)","synonyms":[{"name":"viral perturbation of host mRNA processing","type":"exact"}],"termid":"GO:0046778"}


id: PBO:0113206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA-binding and packaging factor; mtDNA maintenance factor involved in mitochondrial DNA replication and recombination, regulating mtDNA copy number in opposition to DPI34; HMG1 DNA-binding protein family member containing two HMG-boxes; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype","termid":"PBO:0113206"}


id: PBO:0028321
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_ethanol_carbon_source","termid":"PBO:0028321"}


id: PBO:0071929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 6","termid":"PBO:0071929"}


id: MONDO:0022932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An n-of-1 disease characterized by hearing loss, almost white hair, a psoriasiform rash with hyperkaratotic papillomata, muscle contractures, and depressed granulocyte and monocyte chemotaxis, dominant hearing loss, white hair, contractures, hyperkeratotic papillomata, and muscle contractures, and depressed granulocyte and monocyte chemotaxis. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:526579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Davenport-Donlan syndrome","secondary_identifiers":["MESH:C535988","MEDGEN:443971","Orphanet:3215","UMLS:C2931076"],"synonyms":[{"name":"Davenport Donlan syndrome","type":"related"},{"name":"dominant hearing loss, white hair, contractures, hyperkeratotic papillomata, and depressed chemotaxis","type":"related"}],"termid":"MONDO:0022932","xrefs":{"Monarch":{"xref_id":"0022932"}}}


id: PBO:0049162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 4","termid":"PBO:0049162"}


id: PBO:0068692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 73, pseudogene","termid":"PBO:0068692"}


id: GO:1903452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G1 to G0 transition.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:di","PMID:24088570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of G1 to G0 transition","termid":"GO:1903450"},{"relation_name":"positively_regulates","term_name":"G1 to G0 transition","termid":"GO:0070314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of G1 to G0 transition","synonyms":[{"name":"activation of G1 to G0 transition","type":"narrow"},{"name":"activation of G1/G0 transition","type":"narrow"},{"name":"activation of cell cycle quiescence","type":"related"},{"name":"activation of establishment of cell quiescence","type":"narrow"},{"name":"activation of stationary phase","type":"related"},{"name":"positive regulation of G1/G0 transition","type":"exact"},{"name":"positive regulation of cell cycle quiescence","type":"related"},{"name":"positive regulation of establishment of cell quiescence","type":"exact"},{"name":"positive regulation of stationary phase","type":"related"},{"name":"up regulation of G1 to G0 transition","type":"exact"},{"name":"up regulation of G1/G0 transition","type":"exact"},{"name":"up regulation of cell cycle quiescence","type":"related"},{"name":"up regulation of establishment of cell quiescence","type":"exact"},{"name":"up regulation of stationary phase","type":"related"},{"name":"up-regulation of G1 to G0 transition","type":"exact"},{"name":"up-regulation of G1/G0 transition","type":"exact"},{"name":"up-regulation of cell cycle quiescence","type":"related"},{"name":"up-regulation of establishment of cell quiescence","type":"exact"},{"name":"up-regulation of stationary phase","type":"related"},{"name":"upregulation of G1 to G0 transition","type":"exact"},{"name":"upregulation of G1/G0 transition","type":"exact"},{"name":"upregulation of cell cycle quiescence","type":"related"},{"name":"upregulation of establishment of cell quiescence","type":"exact"},{"name":"upregulation of stationary phase","type":"related"}],"termid":"GO:1903452"}


id: PBO:0030677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_shape","termid":"PBO:0030677"}


id: PBO:0111332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L7-like protein involved in ribosome biogenesis","termid":"PBO:0111332"}


id: MONDO:0018197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome, hepatocerebral form","termid":"MONDO:0100512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome, hepatocerebrorenal form","secondary_identifiers":["GARD:17564","UMLS:C5190602","Orphanet:363534","MEDGEN:1674910"],"synonyms":[{"name":"mtDNA depletion syndrome, hepatocerebrorenal form","type":"exact"}],"termid":"MONDO:0018197","xrefs":{"Monarch":{"xref_id":"0018197"}}}


id: PBO:0034306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-preys_on","termid":"PBO:0034306"}


id: GO:0032464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein homooligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein oligomerization","termid":"GO:0032461"},{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"positively_regulates","term_name":"protein homooligomerization","termid":"GO:0051260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of protein homooligomerization","synonyms":[{"name":"activation of protein homooligomerization","type":"narrow"},{"name":"induction of protein homooligomerization","type":"related"},{"name":"stimulation of protein homooligomerization","type":"narrow"},{"name":"up regulation of protein homooligomerization","type":"exact"},{"name":"up-regulation of protein homooligomerization","type":"exact"},{"name":"upregulation of protein homooligomerization","type":"exact"}],"termid":"GO:0032464"}


id: PBO:0029748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sequestered_calcium_level","termid":"PBO:0029748"}


id: MONDO:0002334
data:
  {"annotated_genes":["SJAG_05979","SJAG_02460","SJAG_01013","SJAG_01008","SJAG_03453","SJAG_03905","SJAG_01349","SJAG_02527","SJAG_00980","SJAG_03424","SJAG_01548","SJAG_01748","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87685,87529,87531,87684,87532,87530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[86505,86506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"},{"annotations":[85996,85997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018881"},{"annotations":[86047,86048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[87651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"Neoplasms of the hematopoietic system, including hematopoietic cell neoplasms (e.g. leukemias, lymphomas) and non-hematopoietic cell neoplasms that can affect the hematopoietic system (e.g. lymph node and splenic sarcomas). --2003","definition_xrefs":["NCIT:C35813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01008":null,"SJAG_01013":null,"SJAG_01349":null,"SJAG_01548":null,"SJAG_01748":null,"SJAG_02460":null,"SJAG_02527":null,"SJAG_03081":null,"SJAG_03424":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hematopoietic and lymphoid system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1512393","MESH:D019337","DOID:2531","MEDGEN:268180","SCTID:129154003"],"synonyms":[{"name":"blood cancer","type":"narrow"},{"name":"blood neoplasm (disease)","type":"exact"},{"name":"blood tumor","type":"exact"},{"name":"blood tumour","type":"exact"},{"name":"haematological tumours","type":"exact"},{"name":"haematopoietic and lymphoid system tumour","type":"exact"},{"name":"haematopoietic cancer","type":"narrow"},{"name":"haematopoietic neoplasm","type":"broad"},{"name":"haematopoietic neoplasm (morphologic abnormality)","type":"broad"},{"name":"haematopoietic system neoplasm","type":"exact"},{"name":"haematopoietic system tumour","type":"exact"},{"name":"haematopoietic tumours","type":"exact"},{"name":"hematologic cancer","type":"related"},{"name":"hematologic malignancy","type":"narrow"},{"name":"hematologic neoplasm","type":"broad"},{"name":"hematological tumors","type":"exact"},{"name":"hematopoietic and lymphoid system neoplasm","type":"exact"},{"name":"hematopoietic and lymphoid system tumor","type":"exact"},{"name":"hematopoietic cancer","type":"narrow"},{"name":"hematopoietic neoplasm","type":"broad"},{"name":"hematopoietic neoplasm (morphologic abnormality)","type":"broad"},{"name":"hematopoietic system neoplasm","type":"exact"},{"name":"hematopoietic system tumor","type":"exact"},{"name":"hematopoietic tumors","type":"exact"},{"name":"malignant haematopoietic neoplasm","type":"related"},{"name":"malignant haematopoietic neoplasm (morphologic abnormality)","type":"narrow"},{"name":"malignant hematopoietic neoplasm (morphologic abnormality)","type":"narrow"},{"name":"neoplasm of blood","type":"exact"},{"name":"neoplasm of haematopoietic system","type":"exact"},{"name":"neoplasm of hematopoietic system","type":"exact"},{"name":"tumor of blood","type":"exact"},{"name":"tumor of hematopoietic system","type":"exact"},{"name":"tumour of blood","type":"exact"},{"name":"tumour of haematopoietic system","type":"exact"}],"termid":"MONDO:0002334","terms_by_termid":{"MONDO:0007925":null,"MONDO:0009693":null,"MONDO:0011508":null,"MONDO:0018874":null,"MONDO:0018881":null},"xrefs":{"Monarch":{"xref_id":"0002334"}}}


id: PBO:0003942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRM-containing cyclophilin regulating transcription Rct1","termid":"PBO:0003942"}


id: MONDO:0003144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually aggressive malignant embryonal neoplasm of the central nervous system occurring in children. It is characterized by the presence of neuroepithelial cells which form papillary, trabecular, or tubular structures and absence of C19MC amplification. Symptoms include headache, nausea, and vomiting.","definition_xrefs":["NCIT:C4327"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"},{"relation_name":"is_a","term_name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"medulloepithelioma","secondary_identifiers":["Orphanet:251883","icd11.foundation:1078680756","DOID:4790","ONCOTREE:MDEP","SCTID:715903004","UMLS:C5231013","GARD:20721","MEDGEN:1702218"],"synonyms":[{"name":"Diktyoma, malignant","type":"exact"},{"name":"MDEP","type":"related"},{"name":"central nervous system medulloepithelioma","type":"exact"},{"name":"medulloepithelioma NOS (morphologic abnormality)","type":"exact"},{"name":"medulloepithelioma of the central nervous system","type":"exact"},{"name":"medulloepithelioma, central nervous system","type":"exact"}],"termid":"MONDO:0003144","xrefs":{"Monarch":{"xref_id":"0003144"}}}


id: MONDO:0008432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ketone compounds, ability to smell (obsolete MONDO:0008432)","secondary_identifiers":["OMIM:182270"],"synonyms":[{"name":"ketone compounds, ability to smell","type":"exact"}],"termid":"MONDO:0008432","xrefs":{"Monarch":{"xref_id":"0008432"}}}


id: MONDO:0010108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor arising from the testis. Representative examples include teratoma, seminoma, embryonal carcinoma, and yolk sac tumor.","definition_xrefs":["NCIT:C8591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal germ cell tumor","termid":"MONDO:0018202"},{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular germ cell tumor","secondary_identifiers":["SCTID:713577007","DOID:5557","OMIM:273300","ICD9:239.5","MEDGEN:277809","EFO:1000566","Orphanet:363504","GARD:13047","UMLS:C1336708","MESH:C563236"],"synonyms":[{"name":"Male germ cell tumor","type":"related"},{"name":"Male germ cell tumour","type":"related"},{"name":"TGCT","type":"exact"},{"name":"embryonal cell carcinoma","type":"related"},{"name":"endodermal sinus tumor","type":"related"},{"name":"endodermal sinus tumour","type":"related"},{"name":"germ cell neoplasm of testis","type":"exact"},{"name":"germ cell neoplasm of the testis","type":"exact"},{"name":"germ cell tumor of testis","type":"exact"},{"name":"germ cell tumor of the testis","type":"exact"},{"name":"germ cell tumors, somatic","type":"exact"},{"name":"germ cell tumour of testis","type":"exact"},{"name":"germ cell tumour of the testis","type":"exact"},{"name":"male germ cell tumor, somatic","type":"exact"},{"name":"nonseminomatous germ cell tumors","type":"related"},{"name":"nonseminomatous germ cell tumours","type":"related"},{"name":"seminoma","type":"related"},{"name":"spermatocytic seminoma","type":"related"},{"name":"spermatocytic seminoma, somatic","type":"exact"},{"name":"teratoma, testicular","type":"related"},{"name":"testicular germ cell cancer","type":"related"},{"name":"testicular germ cell neoplasm","type":"exact"},{"name":"testicular germ cell neoplasms","type":"exact"},{"name":"testicular germ cell tumor","type":"exact"},{"name":"testicular tumor, somatic","type":"exact"},{"name":"testis germ cell tumor","type":"exact"},{"name":"testis germ cell tumour","type":"exact"}],"termid":"MONDO:0010108","xrefs":{"Monarch":{"xref_id":"0010108"}}}


id: PBO:0071310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 33","termid":"PBO:0071310"}


id: GO:0050959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Echolocation is the method used by some animals (e.g. bats, dolphins and some whales) to determine the location of something by measuring the time it takes for an echo to return from it. These animals emit sound waves and listen for the echo, calculating the distance to the object from the time lapse between sound emission and the echo returning.","definition_xrefs":["PMID:16005275","Wikipedia:Animal_echolocation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"echolocation","secondary_identifiers":["Wikipedia:Echolocation"],"synonyms":[{"name":"biological sonar","type":"exact"},{"name":"perception of environment using reflected sound waves","type":"exact"}],"termid":"GO:0050959"}


id: PBO:0030492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_malate_import","termid":"PBO:0030492"}


id: MONDO:0004911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tertiary syphilis that is manifested as aneurysm formation in the ascending aorta, caused by chronic inflammatory destruction of the vasa vasorum, insufficiency of the aortic valve, or narrowing of the coronary arteries.","definition_xrefs":["DOID:9880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tertiary syphilis","termid":"MONDO:0004497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiovascular syphilis","secondary_identifiers":["ICD9:093.89","ICD9:093.8","ICD9:093.9","MEDGEN:21055","SCTID:83883001","UMLS:C0039130"],"termid":"MONDO:0004911","xrefs":{"Monarch":{"xref_id":"0004911"}}}


id: GO:0046789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor on the host cell surface.","definition_xrefs":["PMID:11511370","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell surface binding","termid":"GO:0046812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"host cell surface receptor binding","synonyms":[{"name":"cell surface antigen activity, host-interacting","type":"related"},{"name":"cell surface receptor ligand","type":"related"}],"termid":"GO:0046789"}


id: PBO:0091359
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dpb4-interacting, RRM and IDR-containing factor","termid":"PBO:0091359"}


id: PBO:0005670
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.12","termid":"PBO:0005670"}


id: FYPO:0004761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a greater extent than normal in regions of pericentric heterochromatin. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PomBase:mah","GO:0043486","PMID:24095277","GO:0005721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"},{"relation_name":"is_a","term_name":"increased protein exchange at pericentric heterochromatin","termid":"FYPO:0006360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"increased histone exchange at pericentric heterochromatin","synonyms":[{"name":"increased histone exchange at dh repeat","type":"narrow"},{"name":"increased histone exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone exchange at pericentric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004761"}


id: PBO:0085202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein required for chromosome stability; involved in new kinetochore assembly and sister chromatid cohesion; forms a stable complex with Iml3p; peripheral component of the Ctf19 kinetochore complex that interacts with Ctf19p, Ctf3p, and Mif2p; required for the spindle assembly checkpoint; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-N and fission yeast mis15","termid":"PBO:0085202"}


id: PBO:0091706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase Ppk27","termid":"PBO:0091706"}


id: GO:0071626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of biting and mashing food with the teeth prior to swallowing.","definition_xrefs":["GOC:gvg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mastication","synonyms":[{"name":"chewing","type":"exact"}],"termid":"GO:0071626"}


id: MONDO:0009462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine phosphorylase deficiency, immune defect due to","secondary_identifiers":["MEDGEN:344562","MESH:C565465","OMIM:243080","UMLS:C1855737"],"synonyms":[{"name":"inosine phosphorylase deficiency, immune defect due to","type":"exact"}],"termid":"MONDO:0009462","xrefs":{"Monarch":{"xref_id":"0009462"}}}


id: FYPO:0005790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis to form a \\\"J\\\" shape. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a J-shaped cell, the curve is centered away from the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"J-shaped vegetative cell","synonyms":[{"name":"J-shaped cell","type":"exact"},{"name":"J-shaped cell during vegetative growth","type":"exact"},{"name":"J-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, J-shaped","type":"exact"}],"termid":"FYPO:0005790"}


id: PBO:0071531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 34","termid":"PBO:0071531"}


id: GO:1904876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF_telomere","GOC:rl","GOC:TermGenie","PMID:17389648","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA ligase activity (obsolete GO:1904876)","synonyms":[{"name":"down regulation of DNA ligase activity","type":"exact"},{"name":"down-regulation of DNA ligase activity","type":"exact"},{"name":"downregulation of DNA ligase activity","type":"exact"},{"name":"inhibition of DNA ligase activity","type":"narrow"}],"termid":"GO:1904876"}


id: PBO:0082784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import of all mitochondrially directed proteins; involved in transfer of precursors from the Tom70p and Tom20p receptors to the Tom40p pore","termid":"PBO:0082784"}


id: GO:0031959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a mineralocorticoid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12606724","PMID:11027914","PMID:15240347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated corticosteroid signaling pathway","termid":"GO:0031958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nuclear receptor-mediated mineralocorticoid signaling pathway","synonyms":[{"name":"intracellular mineralocorticoid receptor signaling pathway","type":"exact"},{"name":"mineralocorticoid receptor signaling pathway","type":"broad"},{"name":"mineralocorticoid receptor signalling pathway","type":"broad"}],"termid":"GO:0031959"}


id: PBO:0059547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Asn (AAU/C)","termid":"PBO:0059547"}


id: PBO:0050296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1","termid":"PBO:0050296"}


id: PBO:0082033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"18kDa catalytic subunit of the Signal Peptidase Complex (SPC); the Signal Peptidase Complex cleaves the signal sequence of proteins targeted to the endoplasmic reticulum; other members are Spc1p, Spc2p, Spc3p, and Sec11p","termid":"PBO:0082033"}


id: PBO:0034420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_commitment_to","termid":"PBO:0034420"}


id: GO:0019181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a halohydrin = an epoxide + a hydrogen halide.","definition_xrefs":["PMID:8017917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"halohydrin hydrogen-halide-lyase activity","termid":"GO:0019181"}


id: PR:P21911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00778","PANTHER:PTHR11921:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.01","secondary_identifiers":["UniProtKB:P21911"],"synonyms":[{"name":"Ip (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SDHB","type":"exact"},{"name":"iron-sulfur subunit of complex II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P21911"}


id: FYPO:0007741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is abnormal during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"abnormal protein distribution across RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-regulated genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"abnormal protein distribution in chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein localization to chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007741"}


id: PBO:0108938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 17","termid":"PBO:0108938"}


id: MONDO:1011441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mast cell tumor that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mast cell tumor, non-human animal","secondary_identifiers":["OMIA:001797"],"termid":"MONDO:1011441","xrefs":{"Monarch":{"xref_id":"1011441"}}}


id: PATO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001176 deaf (obsolete PATO:0001176)","termid":"PATO:0001176"}


id: GO:0050586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2-methylquinolin-4(1H)-one + H+ + O2 = N-acetylanthranilate + CO.","definition_xrefs":["EC:1.13.11.48","RHEA:21572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-hydroxy-2-methylquinolin-4-one 2,4-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R05720","MetaCyc:1.13.11.48-RXN"],"synonyms":[{"name":"(1H)-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase activity","type":"related"},{"name":"1H-3-hydroxy-4-oxo quinaldine 2,4-dioxygenase activity","type":"exact"},{"name":"1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase activity","type":"exact"},{"name":"3-hydroxy-2-methyl-1H-quinolin-4-one 2,4-dioxygenase (CO-forming)","type":"related"},{"name":"3-hydroxy-2-methyl-quinolin-4-one 2,4-dioxygenase activity","type":"exact"}],"termid":"GO:0050586"}


id: MONDO:0012199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any posterior polymorphous corneal dystrophy in which the cause of the disease is a mutation in the COL8A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior polymorphous corneal dystrophy","termid":"MONDO:0020364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior polymorphous corneal dystrophy 2","secondary_identifiers":["OMIM:609140","MEDGEN:377757","UMLS:C1852795","GARD:18213","MESH:C565176","DOID:0110856"],"synonyms":[{"name":"COL8A2 posterior polymorphous corneal dystrophy","type":"exact"},{"name":"PPCD2","type":"exact"},{"name":"Ppcd2","type":"exact"},{"name":"corneal dystrophy, POSTERIOR polymorphous, 2","type":"related"},{"name":"corneal dystrophy, posterior polymorphous 2","type":"exact"},{"name":"corneal dystrophy, posterior polymorphous, type 2","type":"exact"},{"name":"posterior polymorphous corneal dystrophy caused by mutation in COL8A2","type":"exact"},{"name":"posterior polymorphous corneal dystrophy type 2","type":"exact"}],"termid":"MONDO:0012199","xrefs":{"Monarch":{"xref_id":"0012199"}}}


id: PBO:0090835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron transmembrane transporter Fip1","termid":"PBO:0090835"}


id: MONDO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"astigmatism","termid":"MONDO:0011284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"regular astigmatism","secondary_identifiers":["UMLS:C0152193","SCTID:68905002","ICD9:367.21","DOID:11781","icd11.foundation:879600754","MEDGEN:508921"],"termid":"MONDO:0001364","xrefs":{"Monarch":{"xref_id":"0001364"}}}


id: MONDO:0013717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Jeune syndrome in which the cause of the disease is a mutation in the WDR19 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"asphyxiating thoracic dystrophy 5","secondary_identifiers":["GARD:15795","UMLS:C3280598","DOID:0110089","MEDGEN:482228","OMIM:614376"],"synonyms":[{"name":"ATD5","type":"exact"},{"name":"Jeune syndrome caused by mutation in WDR19","type":"exact"},{"name":"SRTD5","type":"exact"},{"name":"WDR19 Jeune syndrome","type":"exact"},{"name":"asphyxiating thoracic dystrophy 5","type":"exact"},{"name":"asphyxiating thoracic dystrophy type 5","type":"exact"},{"name":"short-rib thoracic dysplasia 5 with or without polydactyly","type":"exact"}],"termid":"MONDO:0013717","xrefs":{"Monarch":{"xref_id":"0013717"}}}


id: PBO:0068573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 24, pseudogene","termid":"PBO:0068573"}


id: PR:O74635
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11239:SF1","OMA:SCHPO01964","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit RPB9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.04c","secondary_identifiers":["UniProtKB:O74635"],"synonyms":[{"name":"DNA-directed RNA polymerase II 13.2 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerase II subunit 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2I","type":"exact"}],"termid":"PR:O74635"}


id: GO:0008681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methoxy-6-(all-trans-octaprenyl)phenol + H+ + NADPH + O2 = 2-methoxy-6-all-trans-octaprenyl-1,4-benzoquinol + H2O + NADP+.","definition_xrefs":["RHEA:29407","PMID:4572721","PMID:27822549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-octaprenyl-6-methoxyphenol hydroxylase activity","secondary_identifiers":["MetaCyc:2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN"],"termid":"GO:0008681"}


id: PBO:0087128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein; involved in the cleavage step of mRNA 3'-end formation prior to polyadenylation, and in snoRNA maturation; part of holo-CPF subcomplex APT, which associates with 3'-ends of snoRNA- and mRNA-encoding genes; putative regulatory subunit of type 1 protein phosphatase Glc7p, required for actomyosin ring formation, and for timely dephosphorylation and release of Bnr1p from the division site; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087128"}


id: GO:0018232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-glutamine and peptidyl-cysteine to form a S-(L-isoglutamyl)-L-cysteine protein cross-link.","definition_xrefs":["RESID:AA0108"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(L-isoglutamyl)-L-cysteine (obsolete GO:0018232)","termid":"GO:0018232"}


id: PBO:0068930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 173, pseudogene","termid":"PBO:0068930"}


id: GO:0032469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"endoplasmic reticulum calcium ion homeostasis","synonyms":[{"name":"ER calcium ion concentration regulation","type":"exact"},{"name":"ER calcium ion homeostasis","type":"exact"},{"name":"calcium ion homeostasis in ER","type":"exact"},{"name":"calcium ion homeostasis in endoplasmic reticulum","type":"exact"},{"name":"endoplasmic reticulum calcium ion concentration regulation","type":"exact"},{"name":"regulation of ER calcium ion concentration","type":"exact"},{"name":"regulation of calcium ion concentration in ER","type":"exact"},{"name":"regulation of calcium ion concentration in endoplasmic reticulum","type":"exact"},{"name":"regulation of endoplasmic reticulum calcium ion concentration","type":"exact"}],"termid":"GO:0032469"}


id: PBO:0082196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoate permease; ureidosuccinate permease; also transports dipeptides, though with lower affinity than for allantoate and ureidosuccinate; expression is constitutive but sensitive to nitrogen catabolite repression","termid":"PBO:0082196"}


id: PBO:0045554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 6","termid":"PBO:0045554"}


id: GO:0140570
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75044],"is_not":false,"summary":null,"term":"GO:0140570"}]},"cv_name":"biological_process","definition":"The removal of a mislocalized protein from the mitochondrial outer membrane.","definition_xrefs":["PMID:32973005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraction of mislocalized protein from membrane","termid":"GO:0140568"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"extraction of mislocalized protein from mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"extraction of mislocalized protein from outer mitochondrion membrane","type":"exact"}],"termid":"GO:0140570","terms_by_termid":{"GO:0140570":null}}


id: GO:0035943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of estrone into the circulatory system.","definition_xrefs":["PMID:8395854","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"estrone secretion","synonyms":[{"name":"3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"folliculin secretion","type":"exact"}],"termid":"GO:0035943"}


id: GO:0002703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"regulates","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte mediated immunity","synonyms":[{"name":"regulation of immune cell mediated immunity","type":"exact"},{"name":"regulation of leucocyte mediated immunity","type":"exact"}],"termid":"GO:0002703"}


id: FYPO:0005269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0005269"}


id: PBO:0029398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleoplasm","termid":"PBO:0029398"}


id: _global:transports
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Holds between p and c when p is a transport process or transporter activity and the outcome of this p is to move c from one location to another.","direct_ancestors":[{"relation_name":"is_a","term_name":"transports_or_maintains_localization_of","termid":"_global:transports_or_maintains_localization_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transports","secondary_identifiers":["RO:0002020"],"termid":"_global:transports"}


id: PBO:0054410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1806","termid":"PBO:0054410"}


id: PBO:0026759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_polyubiquitination_during_cellular_response_to_UV","termid":"PBO:0026759"}


id: PBO:0061738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 2","termid":"PBO:0061738"}


id: PBO:0071477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 18","termid":"PBO:0071477"}


id: PBO:0061140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 3","termid":"PBO:0061140"}


id: PBO:0084494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in meiotic recombination; involved in DMC1-dependent meiotic recombination; forms heterodimer with Mei5p; proposed to be an assembly factor for Dmc1p","termid":"PBO:0084494"}


id: PBO:0036440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex (derlin) Der1 (predicted)","termid":"PBO:0036440"}


id: PBO:0058188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4481","termid":"PBO:0058188"}


id: MONDO:0020229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral disease with cataract (obsolete MONDO:0020229)","secondary_identifiers":["Orphanet:98645"],"termid":"MONDO:0020229","xrefs":{"Monarch":{"xref_id":"0020229"}}}


id: PBO:0005109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug174","termid":"PBO:0005109"}


id: PBO:0039626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A8 like 1","termid":"PBO:0039626"}


id: FYPO:0002541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to nucleoplasm","synonyms":[{"name":"increased protein localisation to nucleoplasm","type":"exact"},{"name":"increased protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002541"}


id: PBO:0027164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_exchange_at_pericentric_heterochromatin","termid":"PBO:0027164"}


id: PBO:0108969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 2A","termid":"PBO:0108969"}


id: MONDO:0013082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, developmental defect during embryogenesis syndrome characterized by total or partial colonic aganglionosis associated with peripheral, usually multifocal, neuroblastic tumors (ganglioneuroblastoma, neuroblastoma, ganglioneuroma). Congenital central hypoventilation syndrome, with variable severity of respiratory compromise, cardiovascular and ophthalmologic symptoms, consistent with autonomic nervous system dysfunction, is occasionally associated.","definition_xrefs":["Orphanet:2151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Hirschsprung disease-ganglioneuroblastoma syndrome","secondary_identifiers":["MEDGEN:1683967","UMLS:C5191058","GARD:2695","MESH:C538119"],"synonyms":[{"name":"Hirschsprung disease ganglioneuroblastoma","type":"related"},{"name":"neuroblastoma with Hirschsprung disease","type":"related"}],"termid":"MONDO:0013082","xrefs":{"Monarch":{"xref_id":"0013082"}}}


id: MONDO:0011162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the GJA3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 14 multiple types","secondary_identifiers":["UMLS:C1866078","OMIM:601885","DOID:0110253","MESH:C566608","MEDGEN:356152"],"synonyms":[{"name":"CAE3","type":"narrow"},{"name":"CTRCT14","type":"exact"},{"name":"CZP3","type":"narrow"},{"name":"Cae3","type":"related"},{"name":"GJA3 early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 14, multiple types","type":"related"},{"name":"cataract, zonular pulverulent 3","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in GJA3","type":"exact"},{"name":"zonular pulverulent cataract 3","type":"narrow"}],"termid":"MONDO:0011162","xrefs":{"Monarch":{"xref_id":"0011162"}}}


id: GO:0015184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-cystine from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:mtg_transport","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-cystine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5340130"],"synonyms":[{"name":"L-cystine transporter activity","type":"broad"},{"name":"cystine/diaminopimelate porter activity","type":"narrow"}],"termid":"GO:0015184"}


id: PBO:0041793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping actin protein of muscle Z-line subunit alpha 2","termid":"PBO:0041793"}


id: PBO:0070277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 18","termid":"PBO:0070277"}


id: PBO:0077209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 7 superfamily member 3","termid":"PBO:0077209"}


id: MONDO:0018448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clear cell papillary renal cell carcinoma is a rare, indolent subtype of clear cell renal carcinoma, arising from epithelial cells in the renal cortex. It most frequently manifests with a well-circumscribed, well-encapsulated, unicentric, unilateral, small tumor that typically does not metastasize. Clinically it can present with flank or abdominal pain or hematuria, although most patients are usually asymptomatic at the time of diagnosis. Bilateral and/or multifocal presentation should raise the suspicion of von Hippel-Lindau syndrome.","definition_xrefs":["Orphanet:404511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonpapillary renal cell carcinoma","termid":"MONDO:0007763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"clear cell papillary renal cell carcinoma","secondary_identifiers":["GARD:21721","MEDGEN:1388623","ONCOTREE:CCPRC","UMLS:C4518333","NCIT:C121955","SCTID:734015000"],"termid":"MONDO:0018448","xrefs":{"Monarch":{"xref_id":"0018448"}}}


id: GO:0015424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + amino acid(out/in) = ADP + phosphate + amino acid(in/out).","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type amino acid transporter activity","secondary_identifiers":["GO:0032518","GO:0032520"],"synonyms":[{"name":"ATP-dependent amino acid transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled amino acid transmembrane transporter activity","type":"related"},{"name":"amino acid ABC transporter","type":"narrow"},{"name":"amino acid-exporting ATPase activity","type":"related"},{"name":"amino acid-importing ATPase activity","type":"related"},{"name":"amino acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0015424"}


id: PBO:0065570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin reductase 1","termid":"PBO:0065570"}


id: SO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 4 modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059","EBI:nj","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_4_acetylation_site","synonyms":[{"name":"H4ac","type":"exact"},{"name":"histone 4 acetylation site","type":"exact"}],"termid":"SO:0001972"}


id: PBO:0088800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein, involved in chromatin remodeling","termid":"PBO:0088800"}


id: SO:0001888
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fusion where the deletion brings together transcription factor binding sites.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_fusion","termid":"SO:0001887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_fusion","synonyms":[{"name":"TFBS fusion ","type":"exact"},{"name":"transcription factor binding site fusion","type":"exact"}],"termid":"SO:0001888"}


id: MONDO:0100544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous condition characterized by the gradual, clonal expansion of hematopoietic stem and progenitor cells carrying specific, disruptive, and recurrent genetic variants, in individuals without clear diagnosis of hematological malignancies. It is associated with an increased risk of developing hematologic cancers.","definition_xrefs":["NCIT:C155821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clonal hematopoiesis","termid":"MONDO:0100542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"age-related clonal hematopoiesis","secondary_identifiers":["MEDGEN:1670618","UMLS:C4722404"],"synonyms":[{"name":"ARCH","type":"exact"}],"termid":"MONDO:0100544","xrefs":{"Monarch":{"xref_id":"0100544"}}}


id: MONDO:0957341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"secondary early-onset glaucoma","secondary_identifiers":["UMLS:C5681353","Orphanet:519331","MEDGEN:1843268","GARD:22111"],"termid":"MONDO:0957341","xrefs":{"Monarch":{"xref_id":"0957341"}}}


id: MONDO:0012835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any systemic lupus erythematosus in which the cause of the disease is a mutation in the STAT4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 11","secondary_identifiers":["OMIM:612253","UMLS:C2677096","MEDGEN:393656"],"synonyms":[{"name":"SLEB11","type":"related"},{"name":"STAT4 systemic lupus erythematosus (disease)","type":"exact"},{"name":"susceptibility to systemic lupus erythematosus 11","type":"related"},{"name":"systemic lupus erythematosus (disease) caused by mutation in STAT4","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 11","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, type 11","type":"exact"}],"termid":"MONDO:0012835","xrefs":{"Monarch":{"xref_id":"0012835"}}}


id: PBO:0084430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL64 is a nonfunctional homolog of the MAL63 trans-activator; encoded within the complex locus MAL6","termid":"PBO:0084430"}


id: MONDO:0018303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete generalized isolated dystonia (obsolete MONDO:0018303)","termid":"MONDO:0018303","xrefs":{"Monarch":{"xref_id":"0018303"}}}


id: GO:1901164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of trophoblast cell migration","termid":"GO:1901163"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of trophoblast cell migration","synonyms":[{"name":"down regulation of trophoblast cell migration","type":"exact"},{"name":"down-regulation of trophoblast cell migration","type":"exact"},{"name":"downregulation of trophoblast cell migration","type":"exact"},{"name":"inhibition of trophoblast cell migration","type":"narrow"}],"termid":"GO:1901164"}


id: PBO:0087704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; affects transcription by acting as target of activators and repressors; forms part of the tail domain of mediator","termid":"PBO:0087704"}


id: GO:0036244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:di","Wikipedia:PH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to neutral pH","termid":"GO:0036176"},{"relation_name":"is_a","term_name":"cellular response to pH","termid":"GO:0071467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to neutral pH","termid":"GO:0036244"}


id: MONDO:1012520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral deafness and vestibular dysfunction, non-human animal","termid":"MONDO:1011710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral deafness and vestibular dysfunction, dog","secondary_identifiers":["OMIA:002148-9615"],"termid":"MONDO:1012520","xrefs":{"Monarch":{"xref_id":"1012520"}}}


id: GO:1901053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sarcosine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:17951379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"sarcosine metabolic process","termid":"GO:1901052"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"sarcosine catabolic process","synonyms":[{"name":"sarcosine breakdown","type":"exact"},{"name":"sarcosine catabolism","type":"exact"},{"name":"sarcosine degradation","type":"exact"}],"termid":"GO:1901053"}


id: PBO:0083568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF GLE2/YER107C","termid":"PBO:0083568"}


id: GO:0030577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of Lands, a class of nuclear body that react against SP140 auto-antibodies.","definition_xrefs":["PMID:10921892","PMID:8695863","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Lands organization","synonyms":[{"name":"LYSP100-associated nuclear domain organization","type":"exact"},{"name":"Lands organisation","type":"exact"},{"name":"Lands organization and biogenesis","type":"related"}],"termid":"GO:0030577"}


id: GO:0052121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a chemical on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in host environment (obsolete GO:0052121)","synonyms":[{"name":"positive chemotaxis in response to host environment","type":"exact"}],"termid":"GO:0052121"}


id: PBO:0027968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_copper","termid":"PBO:0027968"}


id: GO:0045992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic development","synonyms":[{"name":"down regulation of embryonic development","type":"exact"},{"name":"down-regulation of embryonic development","type":"exact"},{"name":"downregulation of embryonic development","type":"exact"},{"name":"inhibition of embryonic development","type":"narrow"}],"termid":"GO:0045992"}


id: GO:1903879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 11beta-hydroxyprogesterone.","definition_xrefs":["PMID:10802282","GOC:TermGenie","GO_REF:0000067","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"11beta-hydroxyprogesterone binding","termid":"GO:1903879"}


id: GO:0103066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol + NAD(P) = 4alpha-methyl-5alpha-cholesta-8-en-3-one + carbon dioxide + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol:NAD(P)+ 3-oxidoreductase (decarboxylating) activity (obsolete GO:0103066)","termid":"GO:0103066"}


id: FYPO:0001552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular zinc level","synonyms":[{"name":"increased cellular zinc ion level","type":"exact"},{"name":"increased cellular zinc level during mitotic cell cycle","type":"related"},{"name":"increased cellular zinc level during vegetative growth","type":"exact"},{"name":"increased zinc accumulation","type":"related"}],"termid":"FYPO:0001552"}


id: GO:1901104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracenomycin C.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"tetracenomycin C metabolic process","synonyms":[{"name":"tetracenomycin C metabolism","type":"exact"}],"termid":"GO:1901104"}


id: MONDO:0011562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A late onset Parkinson disease that has material basis in heterozygous triplication of the alpha-synuclein gene (SNCA) on chromosome 4q22.","definition_xrefs":["PMID:17251522","PMID:14755720","DOID:0060895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late-onset Parkinson disease","termid":"MONDO:0008199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant Parkinson disease 4","secondary_identifiers":["GARD:18475","MEDGEN:381361","UMLS:C1854182","MESH:C565324","OMIM:605543"],"synonyms":[{"name":"PARK4","type":"related"},{"name":"Parkinson disease 4, autosomal dominant","type":"related"},{"name":"Parkinson disease 4, autosomal dominant Lewy body","type":"related"},{"name":"autosomal dominant Lewy body Parkinson disease 4","type":"exact"},{"name":"autosomal dominant Parkinson disease 4","type":"exact"},{"name":"autosomal dominant Parkinson disease type 4","type":"exact"},{"name":"autosomal dominant Parkinson's disease 4","type":"related"}],"termid":"MONDO:0011562","xrefs":{"Monarch":{"xref_id":"0011562"}}}


id: PBO:0043682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortistatin","termid":"PBO:0043682"}


id: MONDO:0020148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A aniridia that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic aniridia (obsolete MONDO:0020148)","secondary_identifiers":["Orphanet:98557"],"synonyms":[{"name":"syndrome associated with aniridia","type":"exact"},{"name":"syndromic aniridia","type":"exact"}],"termid":"MONDO:0020148","xrefs":{"Monarch":{"xref_id":"0020148"}}}


id: GO:0018313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue N, an alanine, to the alpha-amino nitrogen of residue N+2, a glycine, coupled with the formation of a double bond to the alpha-amino nitrogen of residue N+1 which loses one hydrogen, and the loss of a molecule of water.","definition_xrefs":["RESID:AA0187"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-alanyl-5-imidazolinone glycine (obsolete GO:0018313)","termid":"GO:0018313"}


id: PBO:0051264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-82 (pseudogene)","termid":"PBO:0051264"}


id: MONDO:0003889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive transitional cell carcinoma of the bladder characterized by the presence of clear cells.","definition_xrefs":["NCIT:C39827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infiltrating bladder urothelial carcinoma","termid":"MONDO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"infiltrating bladder urothelial carcinoma, clear cell variant","secondary_identifiers":["DOID:6476","MEDGEN:268572","UMLS:C1512737"],"synonyms":[{"name":"clear cell variant infiltrating bladder urothelial carcinoma","type":"related"},{"name":"infiltrating bladder urothelial carcinoma, clear cell variant","type":"exact"}],"termid":"MONDO:0003889","xrefs":{"Monarch":{"xref_id":"0003889"}}}


id: MONDO:0011857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the KCNQ1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 3","secondary_identifiers":["UMLS:C1837014","MEDGEN:373232","MESH:C563817","OMIM:607554","GARD:15414"],"synonyms":[{"name":"ATFB3","type":"related"},{"name":"KCNQ1 familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 3","type":"exact"},{"name":"atrial fibrillation, familial, type 3","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in KCNQ1","type":"exact"}],"termid":"MONDO:0011857","xrefs":{"Monarch":{"xref_id":"0011857"}}}


id: GO:0045284
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A membrane-bound flavoenzyme complex consisting of four subunits, A, B, C, and D. A and B comprise the membrane-extrinsic catalytic domain and C (InterPro:IPR003510; InterPro:IPR00224) and D (InterPro:IPR003418) link the catalytic centers to the electron-transport chain. In some species, the complex has only three subunits, and in these cases, there is only one membrane anchor instead of two. This family consists of the 13 kDa hydrophobic subunit D. This component may be required to anchor the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. Fumarate reductase couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, in a reaction opposite to that catalyzed by the related complex II of the respiratory chain (succinate dehydrogenase-(ubiquinone)). Examples of this component are found in bacterial species.","definition_xrefs":["InterPro:IPR003418","GOC:mtg_sensu","InterPro:IPR004224"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane fumarate reductase complex (obsolete GO:0045284)","synonyms":[{"name":"fumarate reductase complex","type":"broad"}],"termid":"GO:0045284"}


id: MONDO:0005744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-seminomatous malignant germ cell tumor composed of primitive germ cells. It is the most common malignant germ cell tumor in the pediatric population. It occurs in the infant testis, ovary, sacrococcygeal region, vagina, uterus, prostate, abdomen, liver, retroperitoneum, thorax, and pineal/third ventricle. The tumor mimics the yolk sac of the embryo and produces alpha-fetoprotein (AFP). Treatment includes: surgical resection, radiation, and chemotherapy. This tumor is very responsive to chemotherapy regimens that include cisplatinum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"yolk sac tumor","secondary_identifiers":["EFO:0007252","MedDRA:10048251","Orphanet:876","ONCOTREE:BYST","GARD:348","NANDO:2200069","UMLS:C0014145","DOID:1911","ICDO:9071/3","MEDGEN:41782","NCIT:C3011","SCTID:404081005"],"synonyms":[{"name":"endodermal sinus neoplasm","type":"exact"},{"name":"endodermal sinus tumor","type":"exact"},{"name":"endodermal sinus tumour","type":"exact"},{"name":"hepatoid yolk sac tumor","type":"exact"},{"name":"hepatoid yolk sac tumour","type":"exact"},{"name":"infantile embryonal carcinoma","type":"narrow"},{"name":"yolk SAC tumor, malignant","type":"exact"},{"name":"yolk Sac neoplasm","type":"exact"},{"name":"yolk Sac tumor","type":"exact"},{"name":"yolk Sac tumor site unspecified","type":"exact"},{"name":"yolk Sac tumour","type":"exact"},{"name":"yolk Sac tumour site unspecified","type":"exact"},{"name":"yolk sac tumor","type":"exact"}],"termid":"MONDO:0005744","xrefs":{"Monarch":{"xref_id":"0005744"}}}


id: PBO:0076295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse differentiation inducing 1 like","termid":"PBO:0076295"}


id: PBO:0027178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_cortical_patches_present_in_increased_numbers_at_cell_tip_during_early_mitosis","termid":"PBO:0027178"}


id: GO:2001071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to maltoheptaose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"maltoheptaose binding","termid":"GO:2001071"}


id: GO:0141140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the normal execution of the immunoglobulin-mediated immune response of the host organism. One common mechanism by which this happens is the direct inhibition of immunoglobulin activity, by direct binding or modification. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24753590","PMID:18426869","PMID:22256861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host immunoglobulin-mediated immune response","synonyms":[{"name":"symbiont-mediated suppression of host immunoglobulin activity","type":"related"}],"termid":"GO:0141140"}


id: PBO:0052711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 3","termid":"PBO:0052711"}


id: MONDO:0045059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"},{"relation_name":"is_a","term_name":"cribriform carcinoma","termid":"MONDO:0006176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cribriform carcinoma of breast","secondary_identifiers":["MEDGEN:1843502","UMLS:C2138440","DOID:5675","icd11.foundation:1025219649"],"synonyms":[{"name":"cribriform carcinoma","type":"broad"},{"name":"ductal carcinoma, cribriform type","type":"exact"}],"termid":"MONDO:0045059","xrefs":{"Monarch":{"xref_id":"0045059"}}}


id: FYPO:0004912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in the vacuole is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin absent from cell","termid":"FYPO:0002722"},{"relation_name":"is_a","term_name":"decreased vacuolar phytochelatin level","termid":"FYPO:0004369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"phytochelatin absent from vacuole","synonyms":[{"name":"cadystin absent from vacuole","type":"exact"},{"name":"phytochelatin absent from vacuole during mitotic cell cycle","type":"related"},{"name":"phytochelatin absent from vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0004912"}


id: PBO:0113066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex; associates with and protects nucleosome-free regions of the genome including rDNA, tDNA and telomeric loci, contributing to genome integrity","termid":"PBO:0113066"}


id: PBO:0065467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 8 pseudogene 1","termid":"PBO:0065467"}


id: MONDO:0007476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Dupuyren contracture is a rare, genetic, epidermal disease characterized by a, usually unilateral, progressive thickening and shortening of the palmar fascia, leading to permanent flexion contracture of the digits in several members of a family. It most commonly affects the fourth digit, followed by the fifth and then the third (first and second digits are usually spared).","definition_xrefs":["Orphanet:79142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"superficial Fibromatosis","termid":"MONDO:0016037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial Dupuytren contracture","secondary_identifiers":["SCTID:274142002","UMLS:C0013312","OMIM:126900","MEDGEN:41672"],"synonyms":[{"name":"Dupuytren contracture","type":"related"},{"name":"Dupuytren contracture 1","type":"related"},{"name":"plantar fibromas","type":"related"},{"name":"plantar fibromatosis, familial","type":"related"}],"termid":"MONDO:0007476","xrefs":{"Monarch":{"xref_id":"0007476"}}}


id: PBO:0080373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set pre-B cell surrogate light chain 3","termid":"PBO:0080373"}


id: GO:0033693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of neurofilaments into bundles, in which the filaments are longitudinally oriented, with numerous crossbridges between them. Neurofilament bundles may be cross-linked to each other, to membrane-bounded organelles or other cytoskeletal structures such as microtubules.","definition_xrefs":["PMID:11264295","PMID:11034913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament bundle assembly","termid":"GO:0045110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"neurofilament bundle assembly","synonyms":[{"name":"NF bundle assembly","type":"exact"}],"termid":"GO:0033693"}


id: PBO:0003628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Prp5","termid":"PBO:0003628"}


id: MONDO:0003474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of ependymoma, often found in the spinal cord, with tumor cells arranged in fascicles of variable width and cell density. Ependymal rosettes are generally absent, so this lesion must be distinguished from astrocytic neoplasms, but its EM characteristics are ependymal. (Adapted from WHO.)","definition_xrefs":["NCIT:C6903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tanycytic ependymoma","secondary_identifiers":["DOID:5504","MEDGEN:237159","UMLS:C1370500"],"synonyms":[{"name":"tanycytic ependymoma","type":"exact"}],"termid":"MONDO:0003474","xrefs":{"Monarch":{"xref_id":"0003474"}}}


id: PBO:0088193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcription factor; contains a Zn(2)-Cys(6) binuclear cluster domain, positively regulates transcription of URA1, URA3, URA4, and URA10, which are involved in de novo pyrimidine biosynthesis, in response to pyrimidine starvation; activity may be modulated by interaction with Tup1p","termid":"PBO:0088193"}


id: PBO:0061931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 1","termid":"PBO:0061931"}


id: PBO:0068901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 143, pseudogene","termid":"PBO:0068901"}


id: FYPO:0006542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during mitosis is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during mitosis","synonyms":[{"name":"increased RNA accumulation during mitosis","type":"related"},{"name":"increased RNA level during M phase of mitotic cell cycle","type":"related"},{"name":"increased RNA level during mitosis during vegetative growth","type":"exact"},{"name":"increased RNA level during mitotic M phase","type":"related"},{"name":"increased mRNA level during mitosis","type":"narrow"},{"name":"increased transcript level during mitosis","type":"exact"}],"termid":"FYPO:0006542"}


id: GO:0001824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm. The blastula follows the morula and precedes the gastrula in the developmental sequence.","definition_xrefs":["GOC:dph","ISBN:0124020607","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"in utero embryonic development","termid":"GO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastocyst development","synonyms":[{"name":"blastula development","type":"related"}],"termid":"GO:0001824"}


id: MONDO:0003925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the ciliated respiratory mucosa that lines the ethmoid sinus. It results from the invagination and proliferation of epithelial cells in the underlying stroma.","definition_xrefs":["NCIT:C6843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted papilloma","termid":"MONDO:0002537"},{"relation_name":"is_a","term_name":"ethmoid sinus Schneiderian papilloma","termid":"MONDO:0003923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethmoid sinus inverted papilloma","secondary_identifiers":["MEDGEN:232472","UMLS:C1333474","DOID:6562"],"synonyms":[{"name":"ethmoid sinus inverted papilloma","type":"exact"},{"name":"inverted papilloma of ethmoid sinus","type":"exact"},{"name":"inverted papilloma of the ethmoid sinus","type":"exact"}],"termid":"MONDO:0003925","xrefs":{"Monarch":{"xref_id":"0003925"}}}


id: GO:0043545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor metabolic process","synonyms":[{"name":"Moco metabolic process","type":"exact"},{"name":"Moco metabolism","type":"exact"},{"name":"molybdopterin cofactor metabolism","type":"exact"}],"termid":"GO:0043545"}


id: MONDO:0006598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatitis caused or precipitated by exposure to ultraviolet sunlight, or by mediating phototoxic or photoallergic material in response to ultraviolet sunlight.","definition_xrefs":["NCIT:C4816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irritant dermatitis","termid":"MONDO:0006564"},{"relation_name":"is_a","term_name":"photosensitivity disease","termid":"MONDO:0006597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"phototoxic dermatitis","secondary_identifiers":["DOID:4407","EFO:1000753","UMLS:C0162830","Wikipedia:Photodermatitis","MESH:D017484","SCTID:53597009","MEDGEN:58188"],"synonyms":[{"name":"Photodermatitis","type":"exact"},{"name":"Photosensitisation reaction","type":"exact"},{"name":"photosensitive dermatitis","type":"exact"},{"name":"photosensitiveness","type":"exact"},{"name":"photosensitivity reaction","type":"exact"}],"termid":"MONDO:0006598","xrefs":{"Monarch":{"xref_id":"0006598"}}}


id: GO:0034732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor TFIIIB-beta complex that contains the TATA-binding protein (TBP), B'' and a specialized homolog of the conserved subunit BRF referred to as BRFU or TFIIIB50, which found in human but not conserved in yeast; the complex is involved in the regulation of transcription from type 3 (upstream) RNA polymerase III promoters.","definition_xrefs":["PMID:11433012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor TFIIIB complex","termid":"GO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIB-alpha complex","termid":"GO:0034732"}


id: GO:0050120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + H2O + NAD+ = N-acetyl-D-glucosaminate + 2 H+ + NADH.","definition_xrefs":["EC:1.1.1.240","RHEA:23144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetylhexosamine 1-dehydrogenase activity","secondary_identifiers":["MetaCyc:N-ACETYLHEXOSAMINE-1-DEHYDROGENASE-RXN","KEGG_REACTION:R01202"],"synonyms":[{"name":"N-acetyl-D-hexosamine dehydrogenase activity","type":"related"},{"name":"N-acetyl-D-hexosamine:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"N-acetylhexosamine dehydrogenase activity","type":"related"}],"termid":"GO:0050120"}


id: PBO:0062525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily T member 1 pseudogene","termid":"PBO:0062525"}


id: PBO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 44","termid":"PBO:0052752"}


id: GO:0046905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 geranylgeranyl diphosphate = 15-cis-phytoene + 2 diphosphate.","definition_xrefs":["RHEA:34475","PMID:12641468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"15-cis-phytoene synthase activity","secondary_identifiers":["EC:2.5.1.32","MetaCyc:RXN-13323"],"synonyms":[{"name":"PSase activity","type":"exact"},{"name":"geranylgeranyl-diphosphate geranylgeranyltransferase activity","type":"exact"},{"name":"geranylgeranyl-diphosphate:geranylgeranyl-diphosphate geranylgeranyltransferase (15-cis-phytoene-forming) activity","type":"exact"},{"name":"phytoene synthase activity","type":"exact"},{"name":"prephytoene-diphosphate synthase activity","type":"exact"}],"termid":"GO:0046905"}


id: GO:0006067
data:
  {"annotated_genes":["SJAG_00240","SJAG_03743","SJAG_01414","SJAG_03822","SJAG_05006","SJAG_03370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99051,99052,114947,114946,88827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[96898],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ethanol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ethanol metabolism","type":"exact"}],"termid":"GO:0006067","terms_by_termid":{"GO:0019655":null,"GO:2001172":null}}


id: PBO:0089441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalamin (vitamin B12) biosynthesis CobW-like protein","termid":"PBO:0089441"}


id: PBO:0074772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3E","termid":"PBO:0074772"}


id: PBO:0003802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Erf2 (predicted)","termid":"PBO:0003802"}


id: PBO:0065151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 3","termid":"PBO:0065151"}


id: MONDO:0022746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 13","termid":"MONDO:0700029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13p duplication","secondary_identifiers":["MESH:C535450","MEDGEN:419282","UMLS:C2930906"],"synonyms":[{"name":"Duplication 13p","type":"related"},{"name":"chromosome 13p, trisomy","type":"related"},{"name":"trisomy 13p","type":"related"}],"termid":"MONDO:0022746","xrefs":{"Monarch":{"xref_id":"0022746"}}}


id: PBO:0053106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer immune cell infiltration associated lncRNA","termid":"PBO:0053106"}


id: GO:0103035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + methyl-1,4-benzoquinone + NADPH = methyl-1,4-benzoquinol + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH:methyl-1,4-benzoquinone oxidoreductase activity (obsolete GO:0103035)","termid":"GO:0103035"}


id: GO:0019974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to interleukin-14.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 binding (obsolete GO:0019974)","synonyms":[{"name":"IL-14 binding","type":"exact"}],"termid":"GO:0019974"}


id: MONDO:0024614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term used for any state of depression that is not psychotic.","definition_xrefs":["NCIT:C35369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"depressive disorder","termid":"MONDO:0002050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotic depression","secondary_identifiers":["MEDGEN:76370","UMLS:C0282126"],"synonyms":[{"name":"neurotic depression","type":"exact"}],"termid":"MONDO:0024614","xrefs":{"Monarch":{"xref_id":"0024614"}}}


id: PBO:0068511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 101, pseudogene","termid":"PBO:0068511"}


id: GO:0047998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-hyoscyamine + O2 = (6S)-6-hydroxyhyoscyamine + CO2 + succinate.","definition_xrefs":["RHEA:12629","EC:1.14.11.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hyoscyamine (6S)-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03812","MetaCyc:HYOSCYAMINE-6-DIOXYGENASE-RXN"],"synonyms":[{"name":"L-hyoscyamine,2-oxoglutarate:oxygen oxidoreductase ((6S)-hydroxylating)","type":"related"},{"name":"hyoscyamine (6S)-hydroxylase activity","type":"related"},{"name":"hyoscyamine 6-beta-hydroxylase activity","type":"related"},{"name":"hyoscyamine 6-hydroxylase activity","type":"related"},{"name":"hyoscyamine 6beta-dioxygenase activity","type":"related"},{"name":"hyoscyamine 6beta-hydroxylase activity","type":"related"}],"termid":"GO:0047998"}


id: GO:0043669
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer part of the exine, which stains positively with basic fuchsin in optical microscopy and has higher electron density in conventionally prepared TEM sections.","definition_xrefs":["PMID:28904424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ectexine","termid":"GO:0043669"}


id: PBO:0076593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 14","termid":"PBO:0076593"}


id: PBO:0090224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Cdc42 (Gef1)","termid":"PBO:0090224"}


id: PBO:0053674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 857","termid":"PBO:0053674"}


id: GO:0099508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Voltage-gated ion channel activity, occurring in the presynaptic membrane, involved in regulation of presynaptic membrane potential. This is a key step in synaptic transmission, following the arrival of an action potential at the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential","synonyms":[{"name":"voltage gated ion channel activity involved in regulation of presynaptic membrane potential","type":"exact"},{"name":"voltage-dependent ion channel activity involved in regulation of pre-synaptic membrane potential","type":"exact"},{"name":"voltage-dependent ion channel activity involved in regulation of presynaptic membrane potential","type":"exact"},{"name":"voltage-gated ion channel activity involved in regulation of pre-synaptic membrane potential","type":"exact"},{"name":"voltage-gated ion channel activity involved in regulation of presynaptic membrane potential","type":"broad"}],"termid":"GO:0099508"}


id: PR:O60180
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arx1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metalloprotease arx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.05","synonyms":[{"name":"Spom972h-arx1","type":"exact"},{"name":"associated with ribosomal export complex protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60180"}


id: MOD:01504
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01504"}


id: GO:0018649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetrahydrofuran + O2 + 2 H+ + 2 e- = H2O + 2-hydroxytetrahydrofuran.","definition_xrefs":["UM-BBD_reactionID:r0017"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrahydrofuran hydroxylase activity (obsolete GO:0018649)","termid":"GO:0018649"}


id: FYECO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition specifying the temperature at which the experiment was performed.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000002 temperature (obsolete FYECO:0000002)","termid":"FYECO:0000002"}


id: MONDO:0017263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A inherited ichthyosis that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete inherited ichthyosis syndromic form (obsolete MONDO:0017263)","secondary_identifiers":["icd11.foundation:488102959","Orphanet:281085"],"synonyms":[{"name":"syndrome associated with inherited ichthyosis","type":"exact"},{"name":"syndromic inherited ichthyosis","type":"exact"}],"termid":"MONDO:0017263","xrefs":{"Monarch":{"xref_id":"0017263"}}}


id: PBO:0055620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3059","termid":"PBO:0055620"}


id: GO:0014725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extraocular skeletal muscle development. Extraocular skeletal muscle development is the process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"regulates","term_name":"extraocular skeletal muscle development","termid":"GO:0002074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extraocular skeletal muscle development","termid":"GO:0014725"}


id: PBO:0075715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 4","termid":"PBO:0075715"}


id: PBO:0065333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 57","termid":"PBO:0065333"}


id: GO:0033099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded extension of the cell, originally characterized in Mycoplasma species, that contains an electron-dense core that is part of the cytoskeleton and is oriented lengthwise and ends distally in a bulbous knob (terminal button). Required for adherence to host cells and involved in gliding motility and cell division.","definition_xrefs":["PMID:11325545","PMID:12003948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"attachment organelle","termid":"GO:0033099"}


id: PBO:0011152
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ichthyosis","termid":"PBO:0011152"}


id: PBO:0080805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 1","termid":"PBO:0080805"}


id: GO:0008421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-long-chain-fatty-acyl-L-glutamate + H2O = a fatty acid anion + L-glutamate.","definition_xrefs":["EC:3.5.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty-acyl-glutamate deacylase activity","secondary_identifiers":["MetaCyc:3.5.1.55-RXN","RHEA:17517"],"synonyms":[{"name":"N-long-chain-fatty-acyl-L-glutamate amidohydrolase activity","type":"related"},{"name":"long-chain acylglutamate amidase activity","type":"related"},{"name":"long-chain aminoacylase activity","type":"related"},{"name":"long-chain fatty acyl-glutamate deacylase activity","type":"exact"},{"name":"long-chain-fatty-acyl-glutamate deacylase activity","type":"exact"}],"termid":"GO:0008421"}


id: PR:O94283
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erv41 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-derived vesicles protein 41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.04c","synonyms":[{"name":"Spom972h-erv41","type":"exact"}],"termid":"PR:O94283"}


id: MONDO:0007218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly type A4 (BDA4) is a congenital malformation characterized by brachymesophalangy affecting mainly the 2nd and the 5th digit.","definition_xrefs":["Orphanet:93394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A4","secondary_identifiers":["MEDGEN:354669","MESH:C537097","GARD:990","DOID:0110967","icd11.foundation:10379198","OMIM:112800","SCTID:715721005","UMLS:C1862139"],"synonyms":[{"name":"BDA4","type":"exact"},{"name":"Brachymesophalangy 2 and 5","type":"related"},{"name":"Brachymesophalangy II and V","type":"exact"},{"name":"Temtamy type brachydactyly","type":"exact"},{"name":"brachydactyly Temtamy type","type":"related"},{"name":"brachydactyly, Temtamy type","type":"exact"},{"name":"brachydactyly, type A4","type":"related"},{"name":"brachymesophalangy II and V","type":"exact"}],"termid":"MONDO:0007218","xrefs":{"Monarch":{"xref_id":"0007218"}}}


id: PBO:0004041
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.5","termid":"PBO:0004041"}


id: MONDO:1040015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease characterized by life-threatening organ dysfunction due to a dysreguated host response.","definition_xrefs":["PMID:26903338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious disease with sepsis","termid":"MONDO:1040015","xrefs":{"Monarch":{"xref_id":"1040015"}}}


id: PATO:0002039
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's curving inward on both sides or surfaces.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave","termid":"PATO:0001857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biconcave","termid":"PATO:0002039"}


id: GO:1902787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23826995","GOC:mengo_curators","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to dodecane","termid":"GO:1902786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dodecane","termid":"GO:1902787"}


id: PR:Q9P6I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02355","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.10c","secondary_identifiers":["UniProtKB:Q9P6I0"],"synonyms":[{"name":"AsnRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NARS2","type":"exact"},{"name":"asparaginyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I0"}


id: GO:0033636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to temperature stimulus (obsolete GO:0033636)","synonyms":[{"name":"modulation by symbiont of host response to thermal stimulus","type":"exact"}],"termid":"GO:0033636"}


id: PR:Q09858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nnf1 gene.","definition_xrefs":["UniProtKB:Q09858","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein nnf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.04","synonyms":[{"name":"NMS complex subunit nnf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nnf1","type":"exact"}],"termid":"PR:Q09858"}


id: PBO:0071049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 51","termid":"PBO:0071049"}


id: MONDO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"impaired renal function disease","termid":"MONDO:0001343"},{"relation_name":"is_a","term_name":"secondary hyperparathyroidism","termid":"MONDO:0006964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"secondary hyperparathyroidism of renal origin","secondary_identifiers":["ICD9:588.81","DOID:12465","UMLS:C0271847","MEDGEN:543606","ICD10CM:N25.81","icd11.foundation:610229783","SCTID:19034001"],"synonyms":[{"name":"hyperparathyroidism due to renal insufficiency","type":"exact"},{"name":"secondary hyperparathyroidism (of renal origin)","type":"exact"}],"termid":"MONDO:0001530","xrefs":{"Monarch":{"xref_id":"0001530"}}}


id: GO:0031566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular process in which the contractile ring cytokinetic ring attains its fully functional state.","definition_xrefs":["PMID:25451933","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"actomyosin contractile ring organization","termid":"GO:0044837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actomyosin contractile ring maturation","synonyms":[{"name":"actomyosin contractile ring maintenance","type":"related"},{"name":"cytokinesis, contractile ring maintenance","type":"related"}],"termid":"GO:0031566"}


id: MONDO:0800098
data:
  {"annotated_genes":["SJAG_02295"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012477"}]},"cv_name":"mondo","definition":"A retinopathy caused by heterozygous variants in the SNRNP200 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"SNRNP200-related dominant retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"RP 33","type":"related"},{"name":"RP33","type":"narrow"},{"name":"SNRNP200 retinitis pigmentosa","type":"narrow"},{"name":"SNRNP200-related dominant retinopathy","type":"exact"},{"name":"retinitis pigmentosa 33","type":"narrow"},{"name":"retinitis pigmentosa caused by mutation in SNRNP200","type":"narrow"},{"name":"retinitis pigmentosa type 33","type":"narrow"}],"termid":"MONDO:0800098","terms_by_termid":{"MONDO:0012477":null},"xrefs":{"Monarch":{"xref_id":"0800098"}}}


id: PBO:0086835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function with similarity to Pip2p; an oleate-specific transcriptional activator of peroxisome proliferation; YLL054C is not an essential gene","termid":"PBO:0086835"}


id: GO:0045694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryo sac egg cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"embryo sac egg cell differentiation","termid":"GO:0009560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryo sac egg cell differentiation","synonyms":[{"name":"regulation of female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0045694"}


id: MONDO:1010883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in dogs due to a mutation in the HEXB gene. There is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase. Characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:001462-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, dog","termid":"MONDO:1010840"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, HEXB-related dog","synonyms":[{"name":"gangliosidosis, GM2, type II (Sandhoff or variant 0), dog","type":"related"}],"termid":"MONDO:1010883","xrefs":{"Monarch":{"xref_id":"1010883"}}}


id: PBO:0068749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 4, pseudogene","termid":"PBO:0068749"}


id: PBO:0067951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 253","termid":"PBO:0067951"}


id: PBO:0038603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with coiled-coil, ankyrin repeat and PH domains 3","termid":"PBO:0038603"}


id: GO:0019527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentitols, any alditol with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol catabolic process","termid":"GO:0019405"},{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pentitol catabolic process","synonyms":[{"name":"pentitol breakdown","type":"exact"},{"name":"pentitol catabolism","type":"exact"},{"name":"pentitol degradation","type":"exact"}],"termid":"GO:0019527"}


id: MONDO:0011295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in an autosomal dominant mutation of SCZD7 on chromosome 13q32.","definition_xrefs":["DOID:0070083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 7","secondary_identifiers":["OMIM:603176","UMLS:C1864152","MEDGEN:350350"],"synonyms":[{"name":"SCZD7","type":"exact"},{"name":"schizophrenia 7","type":"exact"},{"name":"schizophrenia 7 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility locus, chromosome 13Q-related","type":"related"}],"termid":"MONDO:0011295","xrefs":{"Monarch":{"xref_id":"0011295"}}}


id: GO:1905724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trypanothione biosynthetic process.","definition_xrefs":["PMID:18949025","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of trypanothione biosynthetic process","termid":"GO:1905722"},{"relation_name":"positively_regulates","term_name":"trypanothione biosynthetic process","termid":"GO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"positive regulation of trypanothione biosynthetic process","synonyms":[{"name":"activation of trypanothione anabolism","type":"narrow"},{"name":"activation of trypanothione biosynthesis","type":"narrow"},{"name":"activation of trypanothione biosynthetic process","type":"narrow"},{"name":"activation of trypanothione formation","type":"narrow"},{"name":"activation of trypanothione synthesis","type":"narrow"},{"name":"positive regulation of trypanothione anabolism","type":"exact"},{"name":"positive regulation of trypanothione biosynthesis","type":"exact"},{"name":"positive regulation of trypanothione formation","type":"exact"},{"name":"positive regulation of trypanothione synthesis","type":"exact"},{"name":"up regulation of trypanothione anabolism","type":"exact"},{"name":"up regulation of trypanothione biosynthesis","type":"exact"},{"name":"up regulation of trypanothione biosynthetic process","type":"exact"},{"name":"up regulation of trypanothione formation","type":"exact"},{"name":"up regulation of trypanothione synthesis","type":"exact"},{"name":"up-regulation of trypanothione anabolism","type":"exact"},{"name":"up-regulation of trypanothione biosynthesis","type":"exact"},{"name":"up-regulation of trypanothione biosynthetic process","type":"exact"},{"name":"up-regulation of trypanothione formation","type":"exact"},{"name":"up-regulation of trypanothione synthesis","type":"exact"},{"name":"upregulation of trypanothione anabolism","type":"exact"},{"name":"upregulation of trypanothione biosynthesis","type":"exact"},{"name":"upregulation of trypanothione biosynthetic process","type":"exact"},{"name":"upregulation of trypanothione formation","type":"exact"},{"name":"upregulation of trypanothione synthesis","type":"exact"}],"termid":"GO:1905724"}


id: PBO:0078243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 22/OR9-2 (pseudogene)","termid":"PBO:0078243"}


id: GO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to protect an organism from a directly detected or perceived external threat from an insect or insects to that organism.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to insect","secondary_identifiers":["GO:0002214"],"synonyms":[{"name":"physiological defense response to insect","type":"exact"}],"termid":"GO:0002213"}


id: PBO:0038640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 7","termid":"PBO:0038640"}


id: GO:0009674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Na+(out) = K+(in) + Na+(in).","definition_xrefs":["TC:2.A.38.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"potassium:sodium symporter activity","synonyms":[{"name":"high affinity potassium transporter","type":"related"}],"termid":"GO:0009674"}


id: PR:O43001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syj1 gene.","definition_xrefs":["UniProtKB:O43001","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 5-phosphatase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.02","synonyms":[{"name":"Spom972h-syj1","type":"exact"},{"name":"synaptojanin-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43001"}


id: PBO:0047947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(16)(q23.2)","termid":"PBO:0047947"}


id: PBO:0065607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 1","termid":"PBO:0065607"}


id: PBO:0076281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse defective Rho GTPase homolog 1","termid":"PBO:0076281"}


id: GO:0004651
data:
  {"annotated_genes":["SJAG_04488"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68989],"is_not":false,"summary":null,"term":"GO:0004651"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-phosphopolynucleotide + H2O = a polynucleotide + phosphate.","definition_xrefs":["EC:3.1.3.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"polynucleotide 5'-phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-77078","MetaCyc:RXN-21861"],"synonyms":[{"name":"5'-polynucleotidase activity","type":"related"},{"name":"polynucleotide 5'-phosphohydrolase activity","type":"related"},{"name":"polynucleotide 5'-triphosphatase activity","type":"related"}],"termid":"GO:0004651","terms_by_termid":{"GO:0004651":null}}


id: GO:0031786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1B melatonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1B melatonin receptor binding","synonyms":[{"name":"type 1B melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031786"}


id: PBO:0027646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_BE49385A","termid":"PBO:0027646"}


id: PBO:0086416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase; associates with free 60S ribosomal subunits in the nucleolus and is required for 60S ribosomal subunit biogenesis; constituent of 66S pre-ribosomal particles; member of the ODN family of nucleolar G-proteins","termid":"PBO:0086416"}


id: PBO:0078981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon TGA) 1-1","termid":"PBO:0078981"}


id: PBO:0061861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte transcription factor 2","termid":"PBO:0061861"}


id: FYPO:0007208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which microtubule bundle length is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal microtubule bundle","termid":"FYPO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal microtubule bundle length during mitotic interphase","synonyms":[{"name":"normal interphase microtubule bundle length","type":"exact"},{"name":"normal microtubule bundle length during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0007208"}


id: PBO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.48","termid":"PBO:0000388"}


id: PBO:0039103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 7","termid":"PBO:0039103"}


id: GO:0051565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the concentration of calcium ions in the smooth endoplasmic reticulum.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endoplasmic reticulum calcium ion concentration","termid":"GO:0032471"},{"relation_name":"is_a","term_name":"smooth endoplasmic reticulum calcium ion homeostasis","termid":"GO:0051563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"negative regulation of smooth endoplasmic reticulum calcium ion concentration","synonyms":[{"name":"reduction of calcium ion concentration in smooth ER","type":"exact"},{"name":"reduction of calcium ion concentration in smooth endoplasmic reticulum","type":"exact"},{"name":"reduction of smooth ER calcium ion concentration","type":"exact"},{"name":"reduction of smooth endoplasmic reticulum calcium ion concentration","type":"exact"},{"name":"smooth ER calcium ion concentration reduction","type":"exact"},{"name":"smooth endoplasmic reticulum calcium ion concentration reduction","type":"exact"}],"termid":"GO:0051565"}


id: FYPO:0001159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular pH","synonyms":[{"name":"increased cellular pH during mitotic cell cycle","type":"related"},{"name":"increased cellular pH during vegetative growth","type":"exact"},{"name":"increased cellular pH level","type":"exact"}],"termid":"FYPO:0001159"}


id: MONDO:0014620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myoclonus-dystonia syndrome in which the cause of the disease is a mutation in the KCTD17 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus-dystonia syndrome","termid":"MONDO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"myoclonic dystonia 26","secondary_identifiers":["MEDGEN:904244","OMIM:616398","GARD:16103","UMLS:C4225341","DOID:0090036"],"synonyms":[{"name":"DYT26","type":"related"},{"name":"KCTD17 myoclonus-dystonia syndrome","type":"exact"},{"name":"dystonia 26, myoclonic","type":"related"},{"name":"myoclonic dystonia type 26","type":"exact"},{"name":"myoclonus-dystonia syndrome caused by mutation in KCTD17","type":"exact"}],"termid":"MONDO:0014620","xrefs":{"Monarch":{"xref_id":"0014620"}}}


id: GO:1902908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of melanosome transport.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:23334344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"melanosome transport","termid":"GO:0032402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of melanosome transport","termid":"GO:1902908"}


id: PBO:0058394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4766","termid":"PBO:0058394"}


id: FYPO:0007173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of mitotic checkpoint complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:28366744","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased mitotic checkpoint complex binding","synonyms":[{"name":"decreased MCC binding","type":"exact"},{"name":"reduced mitotic checkpoint complex binding","type":"exact"}],"termid":"FYPO:0007173"}


id: PBO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase (predicted)","termid":"PBO:0001761"}


id: GO:1904646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23555824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to amyloid-beta","termid":"GO:1904645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amyloid-beta","synonyms":[{"name":"cellular response to beta-amyloid","type":"exact"},{"name":"cellular response to beta-amyloids","type":"related"}],"termid":"GO:1904646"}


id: GO:0007266
data:
  {"annotated_genes":["SJAG_03361","SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75665],"is_not":false,"summary":null,"term":"GO:0007266"},{"annotations":[71897],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0035024"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rho subfamily relays a signal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03361":null,"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Rho mediated signal transduction","type":"exact"}],"termid":"GO:0007266","terms_by_termid":{"GO:0007266":null,"GO:0035024":null}}


id: GO:0005995
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68262],"is_not":false,"summary":null,"term":"GO:0005995"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of melibiose, the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melibiose metabolic process","termid":"GO:0005994"},{"relation_name":"is_a","term_name":"disaccharide catabolic process","termid":"GO:0046352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"melibiose catabolic process","references_by_uniquename":{"GO_REF:0000117":null},"synonyms":[{"name":"melibiose breakdown","type":"exact"},{"name":"melibiose catabolism","type":"exact"},{"name":"melibiose degradation","type":"exact"}],"termid":"GO:0005995","terms_by_termid":{"GO:0005995":null}}


id: PBO:0030902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_substance_in_cell_during_vegetative_growth","termid":"PBO:0030902"}


id: PBO:0049478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.2 linker histone, cluster member","termid":"PBO:0049478"}


id: PBO:0074121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 6","termid":"PBO:0074121"}


id: PR:Q5FC18
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgf11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q5FC18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA-associated factor 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.14","synonyms":[{"name":"Spom972h-sgf11","type":"exact"}],"termid":"PR:Q5FC18"}


id: PBO:0056406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 4","termid":"PBO:0056406"}


id: GO:0160106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(9) in tRNA + S-adenosyl-L-methionine = H+ + N(1)-methyladenosine(9) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0016741","GO:0140098","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"tRNA (adenine(9)-N1)-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6787594","RHEA:43148"],"synonyms":[{"name":"tRNA (adenine(9)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA m(1)A(9)-methyltransferase","type":"exact"},{"name":"tRNA(m(1)G(9)/m(1)A(9))-methyltransferase","type":"exact"}],"termid":"GO:0160106"}


id: GO:2001002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of hemicellulose catabolic process","termid":"GO:2000990"},{"relation_name":"is_a","term_name":"regulation of xylan catabolic process","termid":"GO:2001000"},{"relation_name":"positively_regulates","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of xylan catabolic process","synonyms":[{"name":"positive regulation of xylan breakdown","type":"exact"},{"name":"positive regulation of xylan catabolism","type":"exact"},{"name":"positive regulation of xylan degradation","type":"exact"}],"termid":"GO:2001002"}


id: PBO:0040911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 15","termid":"PBO:0040911"}


id: PBO:0005436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal factor (predicted)","termid":"PBO:0005436"}


id: PBO:0067145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 193, pseudogene","termid":"PBO:0067145"}


id: GO:0008344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotory behavior in a fully developed and mature organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult locomotory behavior","synonyms":[{"name":"adult locomotory behaviour","type":"exact"}],"termid":"GO:0008344"}


id: PR:Q9P7M6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hid-1 family protein P27G11.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.12","synonyms":[{"name":"Down-regulated in multiple cancers 1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAP27G11.12","type":"exact"}],"termid":"PR:Q9P7M6"}


id: PBO:0030576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_methionine_level","termid":"PBO:0030576"}


id: PBO:0029458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_morphology","termid":"PBO:0029458"}


id: PR:O13799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mtl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized helicase C17H9.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.02","synonyms":[{"name":"Spom972h-mtl1","type":"exact"}],"termid":"PR:O13799"}


id: MONDO:0019580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Papular mucinosis of infancy is a rare pediatric non progressive form of localized lichen myxedematosus characterized by the development of firm opalescent mucinous papules on the upper arms and the trunk.","definition_xrefs":["Orphanet:90395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"papular mucinosis of infancy","secondary_identifiers":["MEDGEN:909529","GARD:19139","UMLS:C4273966","SCTID:717259002"],"synonyms":[{"name":"cutaneous mucinosis of infancy","type":"exact"}],"termid":"MONDO:0019580","xrefs":{"Monarch":{"xref_id":"0019580"}}}


id: PBO:0083154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF SSZ1/YHR064C","termid":"PBO:0083154"}


id: MONDO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A astrocytoma that involves the diencephalon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diencephalic cancer","termid":"MONDO:0002786"},{"relation_name":"is_a","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"brain astrocytoma","termid":"MONDO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"diencephalic astrocytomas","secondary_identifiers":["NCIT:C5128","DOID:4855","UMLS:C1333284","MEDGEN:272542"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of diencephalon","type":"exact"},{"name":"astrocytoma of diencephalon","type":"exact"},{"name":"astrocytoma of the diencephalon","type":"exact"},{"name":"diencephalic astrocytoma","type":"exact"},{"name":"diencephalon astrocytoma","type":"exact"},{"name":"diencephalon astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0003169","xrefs":{"Monarch":{"xref_id":"0003169"}}}


id: GO:0140021
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58908],"is_not":false,"summary":null,"term":"GO:0140021"}]},"cv_name":"biological_process","definition":"The process in which ADP is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:2541251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP transport","termid":"GO:0015866"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial ADP transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0140021","terms_by_termid":{"GO:0140021":null}}


id: PBO:0079465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23C pseudogene 1","termid":"PBO:0079465"}


id: GO:0046110
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"xanthine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"xanthine metabolism","type":"exact"}],"termid":"GO:0046110","terms_by_termid":{"GO:0009115":null}}


id: PBO:0068273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 10 (inactive)","termid":"PBO:0068273"}


id: MONDO:1040004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any overgrowth syndrome resulting from pathogenic gain-of-function variants in the PIK3R2 gene. The variants can be germline or somatic","definition_xrefs":["PMID:27854409","PMID:22729224","PMID:26860062","PMID:32856318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3R2-related overgrowth spectrum","synonyms":[{"name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","type":"related"}],"termid":"MONDO:1040004","xrefs":{"Monarch":{"xref_id":"1040004"}}}


id: PBO:0078599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 12, Y-linked","termid":"PBO:0078599"}


id: MONDO:8000003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discitis caused by infection with Streptococcus pneumoniae.","definition_xrefs":["PMID:27070599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"},{"relation_name":"is_a","term_name":"pneumococcal infection","termid":"MONDO:0005114"},{"relation_name":"is_a","term_name":"infectious discitis","termid":"MONDO:8000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcus pneumoniae discitis","termid":"MONDO:8000003","xrefs":{"Monarch":{"xref_id":"8000003"}}}


id: PBO:0041764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 3","termid":"PBO:0041764"}


id: GO:1902510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic DNA fragmentation.","definition_xrefs":["PMID:15723341","PMID:15572351","GOC:TermGenie","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"regulates","term_name":"apoptotic DNA fragmentation","termid":"GO:0006309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of apoptotic DNA fragmentation","synonyms":[{"name":"regulation of DNA catabolic process during apoptosis","type":"exact"},{"name":"regulation of DNA catabolism during apoptosis","type":"exact"},{"name":"regulation of DNA fragmentation","type":"broad"},{"name":"regulation of DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"regulation of chromatinolysis","type":"broad"},{"name":"regulation of endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"}],"termid":"GO:1902510"}


id: PR:Q9USP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC11E10.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.07c","synonyms":[{"name":"Spom972h-SPCC11E10.07c","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP0"}


id: PBO:0086960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of ribosomal protein (RP) transcription; has forkhead associated domain that binds phosphorylated proteins; recruits coactivator Ifh1p or corepressor Crf1p to RP gene promoters; also has forkhead DNA-binding domain though in vitro DNA binding assays give inconsistent results; computational analyses suggest it binds DNA directly at highly active RP genes and indirectly through Rap1p motifs at others; suppresses RNA pol III and splicing factor prp4 mutants","termid":"PBO:0086960"}


id: PBO:0040671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 29","termid":"PBO:0040671"}


id: PBO:0082186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol acetyltransferase; responsible for the major part of volatile acetate ester production during fermentation; main enzyme involved in terpenyl acetate synthesis; potential roles in lipid and sterol metabolism","termid":"PBO:0082186"}


id: MONDO:0032654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgE recurrent infection syndrome 3, autosomal recessive","secondary_identifiers":["MEDGEN:1648483","UMLS:C4748969","DOID:0080595","OMIM:618282"],"synonyms":[{"name":"HIES3","type":"related"},{"name":"HYPER-IgE RECURRENT INFECTION SYNDROME 3, AUTOSOMAL RECESSIVE","type":"related"}],"termid":"MONDO:0032654","xrefs":{"Monarch":{"xref_id":"0032654"}}}


id: MONDO:0020099
data:
  {"annotated_genes":["SJAG_01704","SJAG_00319","SJAG_04984","SJAG_01417","SJAG_04473","SJAG_00088","SJAG_02288","SJAG_03961","SJAG_02457","SJAG_00066","SJAG_01615"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030436"},{"annotations":[85949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008422"},{"annotations":[87227,87228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014487"},{"annotations":[87215,87216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024553"},{"annotations":[87567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013307"},{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008785"},{"annotations":[86127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014804"},{"annotations":[87043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020721"},{"annotations":[86075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"sideroblastic anemia","termid":"MONDO:0015194"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00088":null,"SJAG_00319":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02457":null,"SJAG_03961":null,"SJAG_04473":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"inherited sideroblastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19453","MEDGEN:65119","NANDO:1200892","icd11.foundation:789053868","OMIMPS:300751","UMLS:C0221018","Orphanet:98362"],"synonyms":[{"name":"constitutional sideroblastic anaemia","type":"exact"},{"name":"constitutional sideroblastic anemia","type":"exact"}],"termid":"MONDO:0020099","terms_by_termid":{"MONDO:0008422":null,"MONDO:0008785":null,"MONDO:0010524":null,"MONDO:0013307":null,"MONDO:0014487":null,"MONDO:0014804":null,"MONDO:0020721":null,"MONDO:0024553":null,"MONDO:0030436":null},"xrefs":{"Monarch":{"xref_id":"0020099"}}}


id: PBO:0089627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-1 alpha folding chaperone, zinc finger protein Zpr1","termid":"PBO:0089627"}


id: PBO:0083231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely within telomere TEL08L","termid":"PBO:0083231"}


id: MONDO:0007225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibular aplasia-ectrodactyly syndrome is characterized by fibular aplasia and ectrodactyly. Less than 50 familial and sporadic cases have been reported in the literature. Shortening of the femur, a curved tibia, severe foot anomalies and pathologies of the hip, knee and ankle may also be present. The disorder is probably inherited as an autosomal dominant trait, with reduced penetrance, especially in females.","definition_xrefs":["Orphanet:1118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular aplasia-ectrodactyly syndrome","secondary_identifiers":["MESH:C537930","MEDGEN:396290","GARD:2331","OMIM:113310","UMLS:C1862100"],"synonyms":[{"name":"brachydactyly-ectrodactyly with fibular aplasia or hypoplasia","type":"related"},{"name":"fibular aplasia ectrodactyly","type":"related"}],"termid":"MONDO:0007225","xrefs":{"Monarch":{"xref_id":"0007225"}}}


id: FYPO:0002396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"normal maintenance of protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal maintenance of protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002396"}


id: PBO:0012594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 1 Pre3 (predicted)","termid":"PBO:0012594"}


id: MONDO:0004491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant tumor arising from trophoblastic cells in the uterus during pregnancy. Approximately half of the cases develop from a complete hydatidiform mole. There is often marked elevation of human chorionic gonadotropin (hCG) in the blood. Choriocarcinomas disseminate rapidly through the hematogenous route; the lungs are most frequently affected.","definition_xrefs":["NCIT:C27246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of corpus uteri","termid":"MONDO:0016273"},{"relation_name":"is_a","term_name":"gestational choriocarcinoma","termid":"MONDO:0020550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus choriocarcinoma","secondary_identifiers":["DOID:8187","DOID:8188","MEDGEN:234466","UMLS:C1336904","ONCOTREE:UCCA"],"synonyms":[{"name":"body of uterus choriocarcinoma (disease)","type":"exact"},{"name":"body of uterus gestational choriocarcinoma","type":"exact"},{"name":"choriocarcinoma","type":"related"},{"name":"gestational choriocarcinoma of body of uterus","type":"exact"},{"name":"gestational uterine corpus choriocarcinoma","type":"exact"},{"name":"uterine corpus gestational choriocarcinoma","type":"exact"}],"termid":"MONDO:0004491","xrefs":{"Monarch":{"xref_id":"0004491"}}}


id: GO:1990209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the RNA levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ml","PMID:18703740"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of RNA levels in host (obsolete GO:1990209)","termid":"GO:1990209"}


id: PBO:0108892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 5","termid":"PBO:0108892"}


id: PBO:0054469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1868","termid":"PBO:0054469"}


id: GO:0071708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin light chain V and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin V(D)J recombination","termid":"GO:0033152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0010467","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"immunoglobulin light chain V-J recombination","synonyms":[{"name":"immunoglobulin V(D)J joining","type":"broad"},{"name":"immunoglobulin V(D)J recombination","type":"broad"},{"name":"immunoglobulin V-J joining","type":"exact"}],"termid":"GO:0071708"}


id: GO:0070004
data:
  {"annotated_genes":["SJAG_01481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016807"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of C- or N-terminal peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0008233","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"cysteine-type exopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070004","terms_by_termid":{"GO:0016807":null}}


id: PBO:0070371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 9","termid":"PBO:0070371"}


id: PBO:0002103
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds DRE 5'-NG[GT]T[G/A]-3'","termid":"PBO:0002103"}


id: GO:0034561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-bis(4-hydroxyphenyl)-2-propanol = 4,4'-dihydroxy-alpha-methylstilbene + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-bis(4-hydroxyphenyl)-2-proponol dehydratase activity (obsolete GO:0034561)","termid":"GO:0034561"}


id: PBO:0031428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glycerol_dehydrogenase_activity","termid":"PBO:0031428"}


id: MONDO:0003696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete meningeal melanocytoma (obsolete MONDO:0003696)","termid":"MONDO:0003696","xrefs":{"Monarch":{"xref_id":"0003696"}}}


id: MONDO:1012053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital copper deficiency, non-human animal","termid":"MONDO:1011838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital copper deficiency, goat","secondary_identifiers":["OMIA:000226-9925"],"termid":"MONDO:1012053","xrefs":{"Monarch":{"xref_id":"1012053"}}}


id: FYECO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which biotin was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited biotin","termid":"FYECO:0000194"}


id: GO:0030736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phenol = S-adenosyl-L-homocysteine + anisole + H+.","definition_xrefs":["RHEA:14809","EC:2.1.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"phenol O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01239","MetaCyc:PHENOL-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"PMT","type":"related"},{"name":"S-adenosyl-L-methionine:phenol O-methyltransferase activity","type":"related"}],"termid":"GO:0030736"}


id: GO:0016085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of myostimulatory hormone, a peptide hormone that inhibits muscle contraction.","definition_xrefs":["GOC:mah","PMID:8902848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"positively_regulates","termid":"GO:0038023"},{"rel_name":"regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0038023","GO:0005515","GO:0005488","GO:0140677"],"is_obsolete":false,"name":"myoinhibitory hormone activity","termid":"GO:0016085"}


id: PBO:0040447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10A (putative)","termid":"PBO:0040447"}


id: GO:0003329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a pancreatic PP cell fate and its capacity to differentiate into a pancreatic PP cell. A pancreatic polypeptide-producing cell is a cell in the pancreas that produces pancreatic polypeptide.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"pancreatic PP cell differentiation","termid":"GO:0003312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic PP cell fate commitment","termid":"GO:0003329"}


id: MONDO:0007153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arteries, anomalies of","secondary_identifiers":["MEDGEN:360295","UMLS:C1876179","OMIM:108000"],"synonyms":[{"name":"arteries, anomalies of","type":"exact"}],"termid":"MONDO:0007153","xrefs":{"Monarch":{"xref_id":"0007153"}}}


id: PBO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.20","termid":"PBO:0001558"}


id: MOD:00398
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a carbamoyl (carboxamido) group. Replacement of an amino hydrogen produces a ureido group.","definition_xrefs":["DeltaMass:56","PubMed:10978403","PubMed:12203680","Unimod:5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoylated residue","synonyms":[{"name":"Carbamyl","type":"related"},{"name":"Carbamylation","type":"exact"}],"termid":"MOD:00398"}


id: GO:0045758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin polymerization and/or depolymerization (obsolete GO:0045758)","synonyms":[{"name":"positive regulation of actin polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045758"}


id: GO:0061744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific neuromuscular movement of a single organism in response to external or internal stimuli.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:25318560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor behavior","termid":"GO:0061744"}


id: MONDO:0009771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculotrichodysplasia is characterized by retinitis pigmentosa, trichodysplasia, dental anomalies, and onychodysplasia. It has been described in two siblings (brother and sister) born to first cousin parents. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:2718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"oculotrichodysplasia","secondary_identifiers":["GARD:16607","MEDGEN:340517","MESH:C564934","OMIM:257960","icd11.foundation:1202969811","SCTID:722062004","UMLS:C1850332"],"synonyms":[{"name":"Cecato de Lima-Pinheiro syndrome","type":"exact"},{"name":"OTD","type":"related"},{"name":"oculotrichodysplasia","type":"exact"}],"termid":"MONDO:0009771","xrefs":{"Monarch":{"xref_id":"0009771"}}}


id: GO:0098517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which low humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of low humidity","termid":"GO:0098517"}


id: PBO:0088182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc cluster transcriptional activator; necessary for derepression of a variety of genes under non-fermentative growth conditions, active after diauxic shift, binds carbon source responsive elements; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0088182"}


id: PBO:0031076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony_(obsolete_FYPO:0000299)","termid":"PBO:0031076"}


id: PBO:0091948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase","termid":"PBO:0091948"}


id: PR:Q9C0V4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB7E8.02 gene.","definition_xrefs":["UniProtKB:Q9C0V4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB7E8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB7E8.02","synonyms":[{"name":"Spom972h-SPBPB7E8.02","type":"exact"}],"termid":"PR:Q9C0V4"}


id: PBO:0085733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in thiamine and pyridoxine biosynthesis; member of a stationary phase-induced gene family where transcriptional induction precedes the diauxic shift; induced in the absence of thiamin in a Thi2/3p-dependent manner and repressed in its presence; forms a co-regulated gene pair with SNO2; interacts with Thi11p; paralog of SNZ1 and SNZ3","termid":"PBO:0085733"}


id: GO:0060604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of the mammary gland duct by the hollowing out of a solid rod.","definition_xrefs":["PMID:17120154","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube lumen cavitation","termid":"GO:0060605"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland duct cavitation","synonyms":[{"name":"milk duct cavitation","type":"related"}],"termid":"GO:0060604"}


id: PBO:0045552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 5 pseudogene 1","termid":"PBO:0045552"}


id: MONDO:0007723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing Hirschsprung disease in which the cause of the disease is a mutation in the RET gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 1","secondary_identifiers":["MEDGEN:854827","OMIM:142623","UMLS:C3888239"],"synonyms":[{"name":"HSCR1","type":"exact"},{"name":"Hirschsprung disease","type":"broad"},{"name":"Hirschsprung disease caused by mutation in RET","type":"exact"},{"name":"Hirschsprung disease, protection against","type":"related"},{"name":"Hirschsprung disease, susceptibility to, 1","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, type 1","type":"exact"},{"name":"RET Hirschsprung disease","type":"exact"},{"name":"aganglionic megacolon","type":"broad"},{"name":"megacolon, aganglionic","type":"broad"},{"name":"susceptibility to Hirschsprung disease 1","type":"exact"}],"termid":"MONDO:0007723","xrefs":{"Monarch":{"xref_id":"0007723"}}}


id: GO:0034540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-monobromobisphenol A + 2 H+ + 2 e- = bisphenol A + HBr.","definition_xrefs":["UM-BBD_reactionID:r0824"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-monobromobisphenol A reductive dehalogenase activity (obsolete GO:0034540)","termid":"GO:0034540"}


id: PBO:0084603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YML033W was originally annotated as an independent ORF, but was later demonstrated to be an exon of an adjacent ORF, YML034W","termid":"PBO:0084603"}


id: PBO:0069698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 977, pseudogene","termid":"PBO:0069698"}


id: MONDO:0017933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy and renal tubular disease due to mitochondrial DNA mutation is a mitochondrial oxidative phosphorylation disorder characterized by hypertrophic and dilated cardiomyopathy, failure to thrive, myopathy with generalized hypotonia and increased creatine kinase, developmental delay and/or regression with cerebral atrophy on brain MRI, renal manifestations including chronic renal failure, renal tubular acidosis and lactic acidosis. Additional clinical features include seizures and respiratory failure.","definition_xrefs":["Orphanet:324525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy and renal tubular disease due to mitochondrial DNA mutation","secondary_identifiers":["MEDGEN:1650300","UMLS:C4749942","GARD:21442"],"synonyms":[{"name":"hypertrophic cardiomyopathy and renal tubular disease due to mtDNA mutation","type":"exact"}],"termid":"MONDO:0017933","xrefs":{"Monarch":{"xref_id":"0017933"}}}


id: MONDO:0013668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetrasomy 18p is a very rare structural chromosomal anomaly affecting multiple body systems and characterized clinically by craniofacial abnormalities, delayed development, cognitive impairment, changes in muscle tone, distinctive facial features, and rarely renal malformations.","definition_xrefs":["Orphanet:3307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of the short arm of chromosome 18","termid":"MONDO:0016951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrasomy 18p","secondary_identifiers":["ICD9:758.89","icd11.foundation:1182006735","OMIM:614290","SCTID:698849002","GARD:35","MESH:C538306","UMLS:C0795868","MEDGEN:167079"],"synonyms":[{"name":"Isochromosome 18P syndrome","type":"related"},{"name":"Isochromosome 18p","type":"exact"},{"name":"chromosome 18p tetrasomy","type":"related"},{"name":"tetrasomy 18p","type":"exact"},{"name":"tetrasomy chromosome 18p","type":"related"},{"name":"tetrasomy type 18P","type":"exact"},{"name":"tetrasomy type 18p","type":"exact"}],"termid":"MONDO:0013668","xrefs":{"Monarch":{"xref_id":"0013668"}}}


id: GO:0051907
data:
  {"annotated_genes":["SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95858],"is_not":false,"summary":null,"term":"GO:0051907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione = formaldehyde + glutathione.","definition_xrefs":["RHEA:22488","EC:4.4.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-2961","UM-BBD_reactionID:r1145","KEGG_REACTION:R06982"],"synonyms":[{"name":"Gfa","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase (glutathione-forming)","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase activity","type":"related"},{"name":"glutathione-dependent formaldehyde-activating enzyme activity","type":"exact"}],"termid":"GO:0051907","terms_by_termid":{"GO:0051907":null}}


id: GO:0050842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of copper into a protein by L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide.","definition_xrefs":["RESID:AA0355"],"gene_count":0,"genotype_count":0,"name":"obsolete copper incorporation via L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide (obsolete GO:0050842)","termid":"GO:0050842"}


id: PBO:0058161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4455","termid":"PBO:0058161"}


id: FYECO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nocodazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ nocodazole","termid":"FYECO:0000222"}


id: PBO:0041139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3","termid":"PBO:0041139"}


id: GO:0043928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 3'-poly(A) tail.","definition_xrefs":["GOC:mtg_mpo"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic catabolism of deadenylated mRNA (obsolete GO:0043928)","termid":"GO:0043928"}


id: PBO:0091421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NTPase Obg family, human OLA1 ortholog, implicated in mitochondrial translation, ribosome assembly, or tRNA metabolism","termid":"PBO:0091421"}


id: PBO:0044257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X3-C motif chemokine receptor 1","termid":"PBO:0044257"}


id: PBO:0055342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2770","termid":"PBO:0055342"}


id: GO:0061575
data:
  {"annotated_genes":["SJAG_03618","SJAG_01213","SJAG_00439","SJAG_04140","SJAG_03699","SJAG_02057","SJAG_01401","SJAG_04614"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66329,70621,74339,80100,101945,111534,113298,117404],"is_not":false,"summary":null,"term":"GO:0061575"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a cyclin-dependent protein serine/threonine kinase.","definition_xrefs":["PMID:3322810","GOC:dph","PMID:2569363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein serine/threonine kinase regulator activity","termid":"GO:0016538"},{"relation_name":"is_a","term_name":"protein serine/threonine kinase activator activity","termid":"GO:0043539"},{"relation_name":"positively_regulates","term_name":"cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0004693"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00439":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_02057":null,"SJAG_03618":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"positively_regulates","termid":"GO:0016301"},{"rel_name":"regulates","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0016301"},{"rel_name":"regulates","termid":"GO:0004672"},{"rel_name":"positively_regulates","termid":"GO:0004672"},{"rel_name":"positively_regulates","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"positively_regulates","termid":"GO:0016740"},{"rel_name":"positively_regulates","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0004672","GO:0016301","GO:0016740","GO:0140677","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase activator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016534","GO:0016535"],"synonyms":[{"name":"cyclin-dependent protein kinase 5 activator activity","type":"narrow"}],"termid":"GO:0061575","terms_by_termid":{"GO:0061575":null}}


id: PBO:0030124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sulfur_level","termid":"PBO:0030124"}


id: PBO:0114430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR550A3 host gene","termid":"PBO:0114430"}


id: PR:000027526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication regulator sld2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:11937031","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication regulator sld2","termid":"PR:000027523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drc1/UnMod","pombase_gene_id":"SPAC6B12.11","synonyms":[{"name":"DNA replication regulator drc1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PomBase_original_PRO_term_name: DNA replication regulator sld2 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-SLD2/UnMod","type":"exact"},{"name":"drc1/UnMod","type":"exact"}],"termid":"PR:000027526"}


id: MOD:01008
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyl (phenylmethyl) group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}


id: PBO:0050450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U pseudogene 1","termid":"PBO:0050450"}


id: MONDO:0012775
data:
  {"annotated_genes":["SJAG_02744"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86630],"is_not":false,"summary":null,"term":"MONDO:0012775"}]},"cv_name":"mondo","definition":"Any thrombocytopenia in which the cause of the disease is a mutation in the CYCS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02744":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:394329","OMIM:612004","GARD:18289","MESH:C567438","UMLS:C2677608"],"synonyms":[{"name":"CYCS thrombocytopenia","type":"exact"},{"name":"THC4","type":"related"},{"name":"thrombocytopenia 4","type":"exact"},{"name":"thrombocytopenia caused by mutation in CYCS","type":"exact"},{"name":"thrombocytopenia type 4","type":"exact"},{"name":"thrombocytopenia, autosomal dominant, 4","type":"related"}],"termid":"MONDO:0012775","terms_by_termid":{"MONDO:0012775":null},"xrefs":{"Monarch":{"xref_id":"0012775"}}}


id: MONDO:0035159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital tumor characterized by a benign cyst with epithelial and epidermoid components, originating from embryologic displacement and ectopic growth of ectodermal tissue in the central nervous system. In contrast to epidermoid cysts, dermoid cysts also contain dermis and skin appendages. Most common location is the lumbosacral region, as well as the cerebellopontine angle and parasellar area for intracranial lesions. Clinical presentation depends on the location and size of the tumor and includes pain, muscle weakness, motor and sensory disturbances, and incontinence for intraspinal lesions, and intracranial hypertension, gait disturbances, cranial nerve dysfunction, and visual deficits for intracranial tumors. The cysts may rupture and cause chemical meningitis.","definition_xrefs":["Orphanet:530033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermoid or epidermoid cyst of the central nervous system","secondary_identifiers":["UMLS:C5680190","ICD10CM:Q07.8","GARD:22206","MEDGEN:1842182"],"synonyms":[{"name":"Dermoid or epidermoid cyst of the CNS","type":"exact"}],"termid":"MONDO:0035159","xrefs":{"Monarch":{"xref_id":"0035159"}}}


id: PR:O13828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dcp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA decapping complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.12","synonyms":[{"name":"Spom972h-dcp2","type":"exact"}],"termid":"PR:O13828"}


id: PBO:0059544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Leu (UUA/G) 1","termid":"PBO:0059544"}


id: PBO:0040762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin 2","termid":"PBO:0040762"}


id: PBO:0059852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 5","termid":"PBO:0059852"}


id: PBO:0043197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 5","termid":"PBO:0043197"}


id: GO:0072275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric glomerulus are generated and organized. The metanephric glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney, or metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus morphogenesis","termid":"GO:0072102"},{"relation_name":"part_of","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerulus morphogenesis","termid":"GO:0072275"}


id: GO:0102280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline + NADP+ = betaine aldehyde + NADPH + H+.","definition_xrefs":["GOC:pz","PMID:21769646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline dehydrogenase activity","termid":"GO:0008812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"choline monooxygenase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN-12582"],"synonyms":[{"name":"choline monooxygenase activity (NADP-dependent)","type":"exact"}],"termid":"GO:0102280"}


id: MONDO:0003453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pre-malignant neoplasm","termid":"MONDO:0000611"},{"relation_name":"is_a","term_name":"conjunctival tumor","termid":"MONDO:0020204"},{"relation_name":"is_a","term_name":"squamous cell intraepithelial neoplasia","termid":"MONDO:0024475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival intraepithelial neoplasm","secondary_identifiers":["MEDGEN:234172","NCIT:C6120","SCTID:418134006","UMLS:C1333148","DOID:5465","ICD9:239.89"],"synonyms":[{"name":"conjunctiva intraepithelial neoplasia","type":"exact"},{"name":"conjunctival intraepithelial neoplasia","type":"exact"},{"name":"intraepithelial neoplasia of conjunctiva","type":"exact"},{"name":"intraepithelial neoplasia of the conjunctiva","type":"exact"}],"termid":"MONDO:0003453","xrefs":{"Monarch":{"xref_id":"0003453"}}}


id: MONDO:0004481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pancreatic intraductal papillary mucinous neoplasm characterized by the presence of a focal or multifocal invasive carcinomatous component. The invasive carcinoma is either colloid or ductal adenocarcinoma.","definition_xrefs":["NCIT:C5726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic intraductal papillary-mucinous carcinoma","termid":"MONDO:0004285"},{"relation_name":"is_a","term_name":"pancreatic intraductal papillary-mucinous neoplasm","termid":"MONDO:0004286"},{"relation_name":"is_a","term_name":"pancreatic adenocarcinoma","termid":"MONDO:0006047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic intraductal papillary-mucinous neoplasm with an associated invasive carcinoma","secondary_identifiers":["DOID:8150","UMLS:C1518871","MEDGEN:275329","ICDO:8453/3"],"synonyms":[{"name":"pancreatic intraductal papillary mucinous neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"pancreatic intraductal papillary-mucinous neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"pancreatic invasive intraductal papillary-mucinous carcinoma","type":"exact"}],"termid":"MONDO:0004481","xrefs":{"Monarch":{"xref_id":"0004481"}}}


id: PBO:0074603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11D","termid":"PBO:0074603"}


id: PBO:0053252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 5","termid":"PBO:0053252"}


id: PBO:0083091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcriptional activator; involved in cell cycle regulation; overexpression promotes recovery from pheromone induced arrest via CLN1/2 transcription, induction of of IME1 during sporulation, and suppression of stress sensitivity resulting from mutation of the E3 ubiquitin ligase Rsp5p; binds upstream of BAR1 and cell cycle-related genes; phosphorylated form may be ubiquitinated by Dma2p; potential Cdc28p substrate; regulated by Swi4/6 cell-cycle box binding factor (SBF)","termid":"PBO:0083091"}


id: GO:0035082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements.","definition_xrefs":["ISBN:0815316194","GOC:jl","GOC:bf","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle formation","termid":"GO:0001578"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"axoneme assembly","secondary_identifiers":["GO:0035084","GO:0035083"],"synonyms":[{"name":"axoneme biogenesis","type":"related"},{"name":"ciliary axoneme assembly","type":"exact"},{"name":"cilium axoneme assembly","type":"exact"},{"name":"cilium axoneme biogenesis","type":"related"},{"name":"flagellar axoneme assembly","type":"exact"},{"name":"flagellum axoneme assembly","type":"exact"}],"termid":"GO:0035082"}


id: GO:1903780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac conduction.","definition_xrefs":["GOC:TermGenie","PMID:12967627","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"negatively_regulates","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac conduction","synonyms":[{"name":"down regulation of cardiac conduction","type":"exact"},{"name":"down-regulation of cardiac conduction","type":"exact"},{"name":"downregulation of cardiac conduction","type":"exact"},{"name":"inhibition of cardiac conduction","type":"narrow"}],"termid":"GO:1903780"}


id: GO:0102248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 a 1,2-diacyl-sn-glycerol = a triacyl-sn-glycerol + a 2-monoglyceride.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete diacylglycerol transacylase activity (obsolete GO:0102248)","termid":"GO:0102248"}


id: PBO:0076037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 33 pseudogene 1","termid":"PBO:0076037"}


id: PBO:0063156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 2","termid":"PBO:0063156"}


id: PBO:0059521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L","termid":"PBO:0059521"}


id: MONDO:1010171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lysosomal storage disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disease, non-human animal","secondary_identifiers":["OMIA:000616"],"termid":"MONDO:1010171","xrefs":{"Monarch":{"xref_id":"1010171"}}}


id: FYPO:0000939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to spindle pole body","termid":"FYPO:0002769"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule organizing center","termid":"FYPO:0005702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle pole body","synonyms":[{"name":"abnormal protein localisation to mitotic spindle pole body","type":"exact"},{"name":"abnormal protein localization to mitotic SPB","type":"exact"},{"name":"abnormal protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0000939"}


id: MONDO:0014564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital bile acid synthesis defect in which the cause of the disease is a mutation in the ABCD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bile acid synthesis defect","termid":"MONDO:0018841"},{"relation_name":"is_a","term_name":"disorder of peroxisomal transporter","termid":"MONDO:0100372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"congenital bile acid synthesis defect 5","secondary_identifiers":["OMIM:616278","UMLS:C4225390","DOID:0111066","MEDGEN:904751"],"synonyms":[{"name":"ABCD3 congenital bile acid synthesis defect","type":"exact"},{"name":"CBAS5","type":"exact"},{"name":"bile acid synthesis defect, congenital, 5","type":"related"},{"name":"bile acid synthesis defect, congenital, type 5","type":"exact"},{"name":"congenital bile acid synthesis defect 5","type":"exact"},{"name":"congenital bile acid synthesis defect caused by mutation in ABCD3","type":"exact"},{"name":"congenital bile acid synthesis defect type 5","type":"exact"}],"termid":"MONDO:0014564","xrefs":{"Monarch":{"xref_id":"0014564"}}}


id: GO:0008260
data:
  {"annotated_genes":["SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91766],"is_not":false,"summary":null,"term":"GO:0008260"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + a 3-oxo acid = succinate + a 3-oxo-acyl-CoA.","definition_xrefs":["PMID:10964512","PMID:8844009","RHEA:24564","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"succinyl-CoA:3-oxo-acid CoA-transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3-OXOACID-COA-TRANSFERASE-RXN","EC:2.8.3.5","Reactome:R-HSA-74177","GO:0106424"],"synonyms":[{"name":"3-oxo-CoA transferase activity","type":"related"},{"name":"3-oxoacid CoA dehydrogenase activity","type":"related"},{"name":"3-oxoacid CoA-transferase activity","type":"exact"},{"name":"3-oxoacid coenzyme A-transferase activity","type":"related"},{"name":"Succinyl-CoA:3-ketoacid-CoA transferase","type":"exact"},{"name":"acetoacetate succinyl-CoA transferase activity","type":"related"},{"name":"acetoacetyl coenzyme A-succinic thiophorase activity","type":"related"},{"name":"succinyl coenzyme A-acetoacetyl coenzyme A-transferase activity","type":"related"},{"name":"succinyl-CoA 3-ketoacid-CoA transferase activity","type":"related"},{"name":"succinyl-CoA transferase activity","type":"related"}],"termid":"GO:0008260","terms_by_termid":{"GO:0008260":null}}


id: MONDO:0013793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalomyopathy, mitochondrial, due to voltage-dependent anion channel deficiency","secondary_identifiers":["UMLS:C3281106","OMIM:614520","MEDGEN:482736"],"synonyms":[{"name":"encephalomyopathy, mitochondrial, due to voltage-dependent anion channel deficiency","type":"exact"}],"termid":"MONDO:0013793","xrefs":{"Monarch":{"xref_id":"0013793"}}}


id: FYPO:0000756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bafilomycin A1. Cells stop growing (and may die) at a concentration of bafilomycin A1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to bafilomycin A1","synonyms":[{"name":"hypersensitive to bafilomycin A1","type":"exact"},{"name":"sensitive to bafilomycin A","type":"related"},{"name":"sensitive to bafilomycin A1 during mitotic cell cycle","type":"related"},{"name":"sensitive to bafilomycin A1 during vegetative growth","type":"exact"}],"termid":"FYPO:0000756"}


id: GO:0032255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a secretory granule is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of vesicle location","termid":"GO:0051655"},{"relation_name":"part_of","term_name":"secretory granule localization","termid":"GO:0032252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of secretory granule location","synonyms":[{"name":"maintenance of secretory granule localization","type":"related"}],"termid":"GO:0032255"}


id: PBO:0061194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide N-methyltransferase","termid":"PBO:0061194"}


id: MONDO:0010193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Weaver syndrome (WVS) is a rare, multisystem disorder characterized by tall stature, a typical facial appearance (hypertelorism, retrognathia) and variable intellectual disability. Additional features may include camptodactyly, soft doughy skin, umbilical hernia, and a low hoarse cry.","definition_xrefs":["Orphanet:3447"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weaver syndrome","secondary_identifiers":["GTR:AN0102079","OMIM:277590","GTR:AN0102080","NCIT:C125599","GARD:7878","NANDO:1200659","NANDO:2200957","NORD:1839","MESH:C536687","MEDGEN:120511","ICD9:759.89","SCTID:63119004","UMLS:C0265210","DOID:14731","icd11.foundation:2042913723"],"synonyms":[{"name":"EZH2 related overgrowth","type":"related"},{"name":"WEAVER syndrome","type":"related"},{"name":"WEAVER-like syndrome","type":"exact"},{"name":"WVS","type":"related"},{"name":"Weaver Smith syndrome","type":"related"},{"name":"Weaver Williams syndrome","type":"related"},{"name":"Weaver like syndrome","type":"related"},{"name":"Weaver syndrome","type":"exact"},{"name":"Weaver-Smith syndrome","type":"related"},{"name":"Weaver-like syndrome","type":"related"},{"name":"camptodactyly - overgrowth - unusual facies","type":"related"},{"name":"camptodactyly-overgrowth-unusual facies syndrome","type":"exact"},{"name":"intellectual disability, microcephaly, weight deficiency, unusual facies, clinodactyly, bone hypoplasia, and cleft palate","type":"related"},{"name":"mental retardation, microcephaly, weight deficiency, unusual facies, clinodactyly, bone hypoplasia, and cleft palate","type":"related"},{"name":"overgrowth syndrome with accelerated skeletal maturation, unusual facies, and camptodactyly","type":"related"}],"termid":"MONDO:0010193","xrefs":{"Monarch":{"xref_id":"0010193"}}}


id: MONDO:0010400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked scapuloperoneal muscular dystrophy (X-linked SPMD) is a skeletal muscle disease characterized by late onset, co-occurrence of scapular and peroneal muscle weakness, and scapular winging.","definition_xrefs":["Orphanet:431272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scapuloperoneal myopathy","termid":"MONDO:0000727"},{"relation_name":"is_a","term_name":"FHL1-related myopathy","termid":"MONDO:0800462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"X-linked scapuloperoneal muscular dystrophy","secondary_identifiers":["UMLS:C2678061","MEDGEN:395530","OMIM:300695","GARD:7608"],"synonyms":[{"name":"SPM","type":"related"},{"name":"X-linked SPMD","type":"exact"},{"name":"X-linked scapuloperoneal syndrome","type":"exact"},{"name":"scapuloperoneal myopathy, FHL1-related","type":"related"},{"name":"scapuloperoneal myopathy, X-linked dominant","type":"related"},{"name":"scapuloperoneal myopathy, X-linked dominant, X-linked dominant","type":"exact"}],"termid":"MONDO:0010400","xrefs":{"Monarch":{"xref_id":"0010400"}}}


id: PBO:0062436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 100 pseudogene","termid":"PBO:0062436"}


id: PBO:0027081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_oxidation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027081"}


id: PATO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A resistance to a stimulus which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"resistant to","termid":"PATO:0001178"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased resistance to","synonyms":[{"name":"high resistance to","type":"exact"},{"name":"increased resistance","type":"exact"}],"termid":"PATO:0001650"}


id: FYPO:0007005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of DNA recombination downstream of replication fork barriers is decreased.","definition_xrefs":["PMID:30667359","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"decreased DNA recombination downstream of mitotic DNA replication fork barriers","synonyms":[{"name":"decreased DNA recombination downstream of mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased DNA recombination downstream of mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"decreased recombination downstream of mitotic DNA replication fork barriers","type":"exact"},{"name":"decreased template switching recombination downstream of mitotic DNA replication fork barriers","type":"exact"},{"name":"reduced DNA recombination downstream of mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0007005"}


id: PBO:0054182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1556","termid":"PBO:0054182"}


id: GO:1902789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isooctane stimulus.","definition_xrefs":["GOC:mengo_curators","GO_REF:0000071","GOC:TermGenie","PMID:22328008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to isooctane","termid":"GO:1902788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to isooctane","termid":"GO:1902789"}


id: MONDO:0018617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Baroreflex failure is a rare disorder that causes fluctuations in blood pressure with episodes of severe hypertension (high blood pressure) and elevated heart rate in response to stress, exercise, and pain. Individuals may also have hypotension (low blood pressure) with normal or reduced heart rate during periods of rest. Symptoms of baroreflex failure may include headache, sweating, and a heart rate that does not respond to medications. The onset of baroreflex failure may be very abrupt or more gradual. In many cases, the cause of baroreflex failure is not known. However, baroreflex failure can result from surgery or radiation treatment for cancers of the neck, injury to the nerves involved in sensing blood pressure, or a degenerative neurologic disease. Treatment usually involves medications to control blood pressure and heart rate along with stress reduction techniques.","direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baroreflex failure","secondary_identifiers":["icd11.foundation:880662615","MEDGEN:742620","UMLS:C1959798","GARD:10664","Orphanet:443084"],"termid":"MONDO:0018617","xrefs":{"Monarch":{"xref_id":"0018617"}}}


id: PBO:0078563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 49C","termid":"PBO:0078563"}


id: MOD:01188
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:12766232","PubMed:3155470","Unimod:212#Y","PubMed:957432","PubMed:11710128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-ethyl iodoacetamide-d5","termid":"MOD:00562"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d5 - site Y","synonyms":[{"name":"N-ethyl iodoacetamide-d5","type":"related"},{"name":"NEIAA:2H(5)","type":"related"}],"termid":"MOD:01188"}


id: PBO:0061421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide Y receptor Y5","termid":"PBO:0061421"}


id: GO:0010937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic microtubule depolymerization.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"regulates","term_name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of cytoplasmic microtubule depolymerization","termid":"GO:0010937"}


id: SO:0000631
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding for more than one gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"polycistronic_transcript","termid":"SO:0000078"},{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_primary_transcript","synonyms":[{"name":"polycistronic primary transcript","type":"exact"}],"termid":"SO:0000631"}


id: GO:1903613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:11129957","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein tyrosine phosphatase activity (obsolete GO:1903613)","synonyms":[{"name":"regulation of PPT-phosphatase activity","type":"exact"},{"name":"regulation of PTP-phosphatase activity","type":"exact"},{"name":"regulation of PTPase activity","type":"exact"},{"name":"regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"regulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903613"}


id: FYPO:0000272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell fails to form a septum.","definition_xrefs":["PomBase:mah","PMID:9649519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abolished cytokinesis","termid":"FYPO:0000417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished septum assembly","synonyms":[{"name":"abolished division septum assembly","type":"exact"},{"name":"abolished septation","type":"broad"},{"name":"abolished septum assembly during mitotic cell cycle","type":"related"},{"name":"abolished septum formation","type":"exact"},{"name":"septum assembly abolished","type":"exact"},{"name":"septum assembly abolished during vegetative growth","type":"exact"},{"name":"septum formation: absent","type":"related"},{"name":"septum initiation defective","type":"related"}],"termid":"FYPO:0000272"}


id: GO:1900801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cspyrone B1.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"cspyrone B1 metabolic process","termid":"GO:1900800"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cspyrone B1 catabolic process","synonyms":[{"name":"cspyrone B1 breakdown","type":"exact"},{"name":"cspyrone B1 catabolism","type":"exact"},{"name":"cspyrone B1 degradation","type":"exact"}],"termid":"GO:1900801"}


id: GO:0098979
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse consisting of a single presynapse and multiple postsynapses. These postsynapses may come from the same cell of from different cells. Polyadic synapses are common in arthropod and nematode central nervous systems.","definition_xrefs":["PMID:26780543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polyadic synapse","termid":"GO:0098979"}


id: PBO:0058480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5587","termid":"PBO:0058480"}


id: GO:0004119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is decreased in the presence of cGMP.","definition_xrefs":["GOC:mah","PMID:35216259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"3',5'-cGMP-inhibited cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004119"}


id: GO:0070109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-27-mediated signaling pathway","termid":"GO:0070107"},{"relation_name":"positively_regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070109"}


id: FYPO:0008358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the amount of protein present as aggregates of misfolded protein is greater than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein aggregate level","termid":"FYPO:0008358"}


id: GO:1901582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901582)","synonyms":[{"name":"activation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"activation of telomeric RNA transcription from RNA pol II promoter","type":"narrow"},{"name":"positive regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"}],"termid":"GO:1901582"}


id: PBO:0078029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 19 (non-functional)","termid":"PBO:0078029"}


id: FYPO:0004750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and has one or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"elongated septated vegetative cell","synonyms":[{"name":"elongated septated cell during mitotic cell cycle","type":"related"},{"name":"elongated septated cells during vegetative growth","type":"exact"},{"name":"long septated cells","type":"exact"}],"termid":"FYPO:0004750"}


id: GO:0018364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group to a glutamine residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glutamine methylation","termid":"GO:0018364"}


id: MOD:01380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tryptophan residue by a thioether bond to form 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide.","definition_xrefs":["PubMed:18552824","PubMed:4865716","PubMed:363352","RESID:AA0451","PubMed:11805306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide","synonyms":[{"name":"2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide","type":"exact"},{"name":"2-((2R)-2-amino-2carboxyethyl)sulfinyl-3-((2S)-2-amino-2-carboxyethyl)-1H-indole","type":"exact"},{"name":"6'-hydroxy-S-oxo-tryptathionine","type":"exact"},{"name":"CROSSLNK 2'-cysteinyl-6'-hydroxytryptophan sulfoxide (Trp-Cys)","type":"exact"}],"termid":"MOD:01380"}


id: PBO:0031213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype,_adaptive_response_to_loss_of_mtDNA_(obsolete_FYPO:0000221)","termid":"PBO:0031213"}


id: GO:0060387
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure that lies outside the plasma membrane and surrounds the egg. The fertilization envelope forms from the vitelline membrane after fertilization as a result of cortical granule release.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"egg coat","termid":"GO:0035805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fertilization envelope","synonyms":[{"name":"fertilization membrane","type":"related"}],"termid":"GO:0060387"}


id: MONDO:0009483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kapur-Toriello syndrome is an extremely rare syndrome characterized by facial dysmorphism, severe intellectual deficiency, cardiac and intestinal anomalies, and growth retardation.","definition_xrefs":["Orphanet:2328"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kapur-Toriello syndrome","secondary_identifiers":["MESH:C537008","GARD:3078","SCTID:722031003","MEDGEN:208654","UMLS:C0796005","OMIM:244300"],"synonyms":[{"name":"cleft lip/palate-facial, eye, heart and intestinal anomalies syndrome","type":"exact"},{"name":"kapur Toriello syndrome","type":"related"},{"name":"kapur-Toriello syndrome","type":"exact"},{"name":"long columella with cleft Lip/palate and eye, heart, and intestinal anomalies","type":"related"},{"name":"long columella with cleft lip/palate and eye, heart and intestinal anomalies","type":"related"}],"termid":"MONDO:0009483","xrefs":{"Monarch":{"xref_id":"0009483"}}}


id: MONDO:0017195
data:
  {"annotated_genes":["SJAG_01005"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009806"}]},"cv_name":"mondo","definition":"Bruck syndrome is characterized by the association of osteogenesis imperfecta and congenital joint contractures.","definition_xrefs":["Orphanet:2771"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01005":null},"genotype_count":0,"is_obsolete":false,"name":"Bruck syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:259450","icd11.foundation:1783996418","GARD:1029","MEDGEN:609420","DOID:0060231","UMLS:C0432253","ICD9:733.99","MedDRA:10063718","SCTID:254113006"],"synonyms":[{"name":"osteogenesis imperfecta with congenital joint contractures","type":"exact"},{"name":"osteogenesis imperfecta-congenital joint contractures syndrome","type":"exact"}],"termid":"MONDO:0017195","terms_by_termid":{"MONDO:0009806":null},"xrefs":{"Monarch":{"xref_id":"0017195"}}}


id: MONDO:0020612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, kidd system (obsolete MONDO:0020612)","secondary_identifiers":["OMIM:111000"],"synonyms":[{"name":"BLOOD GROUP, KIDD SYSTEM","type":"related"},{"name":"JK","type":"related"},{"name":"Kidd Blood Group System","type":"related"},{"name":"blood group, Kidd","type":"exact"}],"termid":"MONDO:0020612","xrefs":{"Monarch":{"xref_id":"0020612"}}}


id: PBO:0072972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 2","termid":"PBO:0072972"}


id: PBO:0034411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_upstream_or_downstream_target_(obsolete_has_upstream_or_downstream_target)","termid":"PBO:0034411"}


id: GO:2000201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribosomal subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleocytoplasmic transport","termid":"GO:0046823"},{"relation_name":"is_a","term_name":"negative regulation of ribosome biogenesis","termid":"GO:0090071"},{"relation_name":"is_a","term_name":"negative regulation of ribonucleoprotein complex localization","termid":"GO:2000198"},{"relation_name":"is_a","term_name":"regulation of ribosomal subunit export from nucleus","termid":"GO:2000200"},{"relation_name":"negatively_regulates","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0042254"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006810","GO:0044085","GO:0042254","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribosomal subunit export from nucleus","synonyms":[{"name":"negative regulation of ribosomal subunit export from cell nucleus","type":"exact"},{"name":"negative regulation of ribosomal subunit export out of nucleus","type":"exact"},{"name":"negative regulation of ribosomal subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of ribosomal subunit-nucleus export","type":"exact"},{"name":"negative regulation of ribosome export from nucleus","type":"related"}],"termid":"GO:2000201"}


id: MONDO:0013108
data:
  {"annotated_genes":["SJAG_03081","SJAG_00640","SJAG_01013"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85856,85857,85858],"is_not":false,"summary":null,"term":"MONDO:0013108"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01013":null,"SJAG_03081":null},"genotype_count":0,"is_obsolete":false,"name":"leukemia, acute lymphocytic, susceptibility to, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2751595","MEDGEN:442767","OMIM:613065"],"synonyms":[{"name":"ALL","type":"related"},{"name":"All1","type":"related"},{"name":"T-cell acute lymphoblastic leukemia, somatic","type":"exact"},{"name":"leukemia, B-cell acute lymphoblastic, susceptibility to","type":"related"},{"name":"leukemia, T-cell acute lymphoblastic, somatic","type":"exact"},{"name":"leukemia, T-cell acute lymphoblastic, susceptibility to","type":"related"},{"name":"leukemia, T-cell acute lymphocytic, somatic","type":"exact"},{"name":"leukemia, acute lymphoblastic","type":"related"},{"name":"leukemia, acute lymphoblastic, B-Hyperdiploid, susceptibility to","type":"related"},{"name":"leukemia, acute lymphoblastic, somatic","type":"exact"},{"name":"leukemia, acute lymphoblastic, susceptibility to, 1","type":"related"},{"name":"leukemia, acute lymphocytic, Philadelphia chromosome positive, somatic","type":"exact"},{"name":"leukemia, acute lymphocytic, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0013108","terms_by_termid":{"MONDO:0013108":null},"xrefs":{"Monarch":{"xref_id":"0013108"}}}


id: GO:1904741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000063","GOC:rn","PMID:26448198"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1904741)","synonyms":[{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by activation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by positive regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by positive regulation of global transcription from Pol II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by positive regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by stimulation of global transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by up regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by up-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by upregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904741"}


id: GO:0160174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular developmental process by which the outer layer of the cell (the cortex) rotates relative to the inner cytoplasm.","definition_xrefs":["PMID:22949618","PMID:25077289","PMID:37983969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cortical rotation","termid":"GO:0160174"}


