# terms

id: GO:0072385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an organelle towards the minus end of a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"minus-end-directed organelle transport along microtubule","synonyms":[{"name":"microtubule minus-end-directed organelle distribution","type":"narrow"},{"name":"microtubule minus-end-directed organelle localization","type":"exact"}],"termid":"GO:0072385"}


id: PBO:0050363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 66","termid":"PBO:0050363"}


id: PBO:0003371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase (predicted)","termid":"PBO:0003371"}


id: PBO:0048904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A7 family member B","termid":"PBO:0048904"}


id: GO:0047442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 17alpha-hydroxyprogesterone + O2 + reduced NADPH--hemoprotein reductase = acetate + androst-4-ene-3,17-dione + 2 H+ + H2O + oxidized NADPH--hemoprotein reductase.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 17-alpha-hydroxyprogesterone aldolase activity (obsolete GO:0047442)","termid":"GO:0047442"}


id: FYPO:0000890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000883"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000885"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth","termid":"FYPO:0003096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 trimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H3-K9 trimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased histone H3K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000890"}


id: FYPO:0006510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is abnormal at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology","termid":"FYPO:0006508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"abnormal telomere structure","synonyms":[{"name":"abnormal chromosome structure at telomere during vegetative growth","type":"exact"},{"name":"abnormal telomere structure during mitotic cell cycle","type":"related"},{"name":"abnormal telomeric region structure during vegetative growth","type":"exact"}],"termid":"FYPO:0006510"}


id: MONDO:1010497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus venosus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus venosus, gray wolf","termid":"MONDO:1010496"},{"relation_name":"is_a","term_name":"portosystemic shunt, dog","termid":"MONDO:1011590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus venosus, dog","secondary_identifiers":["OMIA:001173-9615"],"termid":"MONDO:1010497","xrefs":{"Monarch":{"xref_id":"1010497"}}}


id: PBO:0039519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B antisense RNA 1","termid":"PBO:0039519"}


id: PR:O94440
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC637.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C637.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.03","synonyms":[{"name":"Spom972h-SPAC637.03","type":"exact"}],"termid":"PR:O94440"}


id: GO:0039531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a cytoplasmic pattern recognition receptor signaling pathway.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","synonyms":[{"name":"regulation of MAV signaling","type":"narrow"},{"name":"regulation of cytosolic pattern recognition receptor signaling pathway","type":"exact"},{"name":"regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway","type":"narrow"},{"name":"regulation of viral-induced cytoplasmic pattern recognition receptor signalling pathway","type":"narrow"}],"termid":"GO:0039531"}


id: GO:0035617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a stress granule into its constituent protein and RNA parts.","definition_xrefs":["GOC:BHF","PMID:19825938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex disassembly","termid":"GO:0032988"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress granule disassembly","synonyms":[{"name":"SG disassembly","type":"exact"}],"termid":"GO:0035617"}


id: MONDO:0005582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent episodes of over-eating.","definition_xrefs":["NCIT:C97162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating disorder","termid":"MONDO:0005451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binge eating disorder","secondary_identifiers":["MESH:D002032","EFO:0005924","UMLS:C0596170","icd11.foundation:1673294767","MEDGEN:154543","SCTID:439960005"],"synonyms":[{"name":"binge eating","type":"exact"},{"name":"binge eating disorder","type":"exact"}],"termid":"MONDO:0005582","xrefs":{"Monarch":{"xref_id":"0005582"}}}


id: PBO:0027410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_thioredoxin_peroxidase_activity","termid":"PBO:0027410"}


id: MONDO:0044634
data:
  {"annotated_genes":["SJAG_01521"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85565],"is_not":false,"summary":null,"term":"MONDO:0044634"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01521":null},"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa-hearing loss-premature aging-short stature-facial dysmorphism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1615526","DOID:0081175","Orphanet:494439","UMLS:C4540367","OMIM:617763","GARD:17903"],"synonyms":[{"name":"retinitis pigmentosa-deafness-premature aging-short stature-facial dysmorphism syndrome","type":"exact"},{"name":"short stature, hearing loss, retinitis pigmentosa, and distinctive facies","type":"exact"}],"termid":"MONDO:0044634","terms_by_termid":{"MONDO:0044634":null},"xrefs":{"Monarch":{"xref_id":"0044634"}}}


id: PBO:0087683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the multiprotein cohesin complex; essential protein involved in chromosome segregation and in double-strand DNA break repair; SMC chromosomal ATPase family member, binds DNA with a preference for DNA with secondary structure","termid":"PBO:0087683"}


id: MONDO:0004742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heterogenous group of degenerative syndromes marked by progressive cerebellar dysfunction either in isolation or combined with other neurologic manifestations. Sporadic and inherited subtypes occur. Inheritance patterns include autosomal dominant, autosomal recessive, and X-linked.","definition_xrefs":["MESH:D013132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar degeneration","termid":"MONDO:0022687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"primary cerebellar degeneration","secondary_identifiers":["DOID:9277","ICD9:334.2","SCTID:23732000","UMLS:C0033132","MEDGEN:19466"],"termid":"MONDO:0004742","xrefs":{"Monarch":{"xref_id":"0004742"}}}


id: PBO:0075749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 2","termid":"PBO:0075749"}


id: PBO:0052240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 10 pseudogene 1","termid":"PBO:0052240"}


id: GO:1900028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ruffle assembly.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of ruffle assembly","termid":"GO:1900027"},{"relation_name":"negatively_regulates","term_name":"ruffle assembly","termid":"GO:0097178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of ruffle assembly","synonyms":[{"name":"down regulation of membrane ruffle formation","type":"exact"},{"name":"down regulation of membrane ruffling","type":"exact"},{"name":"down regulation of ruffle assembly","type":"related"},{"name":"negative regulation of membrane ruffle formation","type":"exact"},{"name":"negative regulation of membrane ruffling","type":"exact"}],"termid":"GO:1900028"}


id: GO:1901395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta2 activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta2 activation (obsolete GO:1901395)","synonyms":[{"name":"regulation of TGF-beta 2 activation","type":"exact"},{"name":"regulation of TGFB2 activation","type":"exact"},{"name":"regulation of TGFbeta 2 activation","type":"exact"}],"termid":"GO:1901395"}


id: MONDO:0014462
data:
  {"annotated_genes":["SJAG_00118","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87197,87198],"is_not":false,"summary":null,"term":"MONDO:0014462"}]},"cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the ANLN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16051","OMIM:616032","DOID:0111133","MEDGEN:863430","UMLS:C4014993"],"synonyms":[{"name":"ANLN focal segmental glomerulosclerosis","type":"exact"},{"name":"FSGS8","type":"exact"},{"name":"focal segmental glomerulosclerosis 8","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in ANLN","type":"exact"},{"name":"focal segmental glomerulosclerosis type 8","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 8","type":"related"}],"termid":"MONDO:0014462","terms_by_termid":{"MONDO:0014462":null},"xrefs":{"Monarch":{"xref_id":"0014462"}}}


id: PBO:0069169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 421, pseudogene","termid":"PBO:0069169"}


id: MONDO:0021509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the myocardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of myocardium","termid":"MONDO:0021380"},{"relation_name":"is_a","term_name":"benign neoplasm of heart","termid":"MONDO:0021450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"benign neoplasm of myocardium","secondary_identifiers":["icd11.foundation:2097885721","SCTID:92238001","NCIT:C4607","UMLS:C0347253","MEDGEN:83862"],"synonyms":[{"name":"benign myocardial neoplasm","type":"exact"},{"name":"benign myocardial tumor","type":"exact"},{"name":"benign myocardial tumour","type":"exact"},{"name":"benign neoplasm of the myocardium","type":"exact"},{"name":"benign tumor of myocardium","type":"exact"},{"name":"benign tumor of the myocardium","type":"exact"},{"name":"benign tumour of myocardium","type":"exact"},{"name":"benign tumour of the myocardium","type":"exact"},{"name":"myocardium benign neoplasm","type":"exact"}],"termid":"MONDO:0021509","xrefs":{"Monarch":{"xref_id":"0021509"}}}


id: MONDO:0005995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infestation with nematode worms of the genus trichostrongylus. Humans become infected by swallowing larvae, usually with contaminated food or drink, although the larvae may penetrate human skin.","definition_xrefs":["MESH:D014253-modified"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"},{"relation_name":"is_a","term_name":"trichostrongyloidiasis","termid":"MONDO:0005994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostrongylosis","secondary_identifiers":["UMLS:C0040948","ICD9:127.6","MESH:D014253","MEDGEN:11908","ICD10CM:B81.2","SCTID:33710003","EFO:0007523","DOID:1254"],"synonyms":[{"name":"Trichostrongyliasis","type":"exact"},{"name":"Trichostrongylus caused disease or disorder","type":"exact"},{"name":"Trichostrongylus disease or disorder","type":"exact"},{"name":"Trichostrongylus infectious disease","type":"exact"},{"name":"infection by Trichostrongylus","type":"exact"},{"name":"infection by Trichostrongylus species","type":"exact"}],"termid":"MONDO:0005995","xrefs":{"Monarch":{"xref_id":"0005995"}}}


id: GO:0050923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a motile cell or organism towards a lower concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"negative chemotaxis","termid":"GO:0050919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of negative chemotaxis","termid":"GO:0050923"}


id: GO:0008181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tumor suppressor (obsolete GO:0008181)","synonyms":[{"name":"tumor suppressor","type":"exact"}],"termid":"GO:0008181"}


id: PBO:0082326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; required for normal peptide hydrolysis by the core 20S particle; N-myristoylation of Rpt2p at Gly2 is involved in regulating the proper intracellular distribution of proteasome activity by controlling the nuclear localization of the 26S proteasome","termid":"PBO:0082326"}


id: PATO:0000646
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's being distorted during formation.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deformed","termid":"PATO:0001617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malformed","synonyms":[{"name":"malformation","type":"narrow"}],"termid":"PATO:0000646"}


id: GO:0051864
data:
  {"annotated_genes":["SJAG_03041","SJAG_03286","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70761,87707],"is_not":false,"summary":null,"term":"GO:0051864"},{"annotations":[67186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 36 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:16362057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03041":null,"SJAG_03286":null,"SJAG_03664":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0032452","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H3K36 demethylase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"[histone-H3]-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3-K36 demethylase activity","type":"exact"},{"name":"histone H3-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-36 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K36 specific)","type":"exact"},{"name":"histone-lysine (H3-K36) demethylase activity","type":"exact"},{"name":"histone-lysine demethylase activity (H3-K36 specific)","type":"exact"},{"name":"histone-lysine(H3-K36) demethylase activity","type":"exact"}],"termid":"GO:0051864","terms_by_termid":{"GO:0051864":null,"GO:0140680":null}}


id: PBO:0065380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 8","termid":"PBO:0065380"}


id: PBO:0050983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 52","termid":"PBO:0050983"}


id: PBO:0063963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pipecolic acid and sarcosine oxidase","termid":"PBO:0063963"}


id: PBO:0046548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 2","termid":"PBO:0046548"}


id: PBO:0051168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-52 (pseudogene)","termid":"PBO:0051168"}


id: PBO:0089684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop23","termid":"PBO:0089684"}


id: MONDO:0006229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the stomach. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"gastric neuroendocrine neoplasm","termid":"MONDO:0003111"},{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric small cell neuroendocrine carcinoma","secondary_identifiers":["DOID:6552","EFO:1000277","ONCOTREE:STSC","UMLS:C1333788","MEDGEN:272664"],"synonyms":[{"name":"Oat cell carcinoma of stomach","type":"exact"},{"name":"Oat cell carcinoma of the stomach","type":"exact"},{"name":"STSC","type":"related"},{"name":"gastric Oat cell carcinoma","type":"exact"},{"name":"gastric small cell carcinoma","type":"exact"},{"name":"gastric small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell carcinoma of stomach","type":"exact"},{"name":"small cell carcinoma of the stomach","type":"exact"},{"name":"stomach small cell carcinoma","type":"exact"}],"termid":"MONDO:0006229","xrefs":{"Monarch":{"xref_id":"0006229"}}}


id: GO:0047419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-D-galactosamine 6-phosphate = acetate + D-galactosamine 6-phosphate.","definition_xrefs":["RHEA:18149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0019213","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N-acetylgalactosamine-6-phosphate deacetylase activity","secondary_identifiers":["MetaCyc:3.5.1.80-RXN"],"termid":"GO:0047419"}


id: PBO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 28","termid":"PBO:0070493"}


id: PBO:0028653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_snRNA_3'-end_processing","termid":"PBO:0028653"}


id: PBO:0041627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 A","termid":"PBO:0041627"}


id: MONDO:0000769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An egg allergy triggered by Gallus gallus eggs.","definition_xrefs":["DOID:0060492"],"gene_count":0,"genotype_count":0,"name":"obsolete chicken egg allergy (obsolete MONDO:0000769)","synonyms":[{"name":"Gallus gallus egg allergy","type":"related"}],"termid":"MONDO:0000769","xrefs":{"Monarch":{"xref_id":"0000769"}}}


id: PBO:0073014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit beta","termid":"PBO:0073014"}


id: PBO:0088859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit Cms1","termid":"PBO:0088859"}


id: PBO:0085105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein with role in transcription, protein quality control; localizes to the intranuclear quality control compartment (INQ) in response to proteasome inhibition or DNA replication stress; INQ likely sequesters proteins involved in DNA metabolism for degradation or re-folding; also localizes to coding regions of transcribed genes; contains three WD domains (WD-40 repeat); human ortholog WDR76 also exhibits perinuclear localization under similar stress conditions","termid":"PBO:0085105"}


id: GO:0004384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + GMP = ADP + GDP, associated with the cell membrane.","definition_xrefs":["EC:2.7.4.8"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane-associated guanylate kinase (obsolete GO:0004384)","synonyms":[{"name":"MAGUK","type":"exact"},{"name":"membrane-associated guanylate kinase","type":"exact"}],"termid":"GO:0004384"}


id: GO:2000003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a DNA damage checkpoint.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle checkpoint","termid":"GO:1901978"},{"relation_name":"is_a","term_name":"regulation of DNA damage checkpoint","termid":"GO:2000001"},{"relation_name":"positively_regulates","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of DNA damage checkpoint","synonyms":[{"name":"positive regulation of DNA damage response, signal transduction resulting in cell cycle arrest","type":"related"}],"termid":"GO:2000003"}


id: GO:0051522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the inactive process of monopolar cell growth, polarized growth from one end of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monopolar cell growth","termid":"GO:0051515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of monopolar cell growth","termid":"GO:0051522"}


id: GO:0046259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of trinitrotoluene, a methylated benzene molecule with three NO2 groups attached to it.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete trinitrotoluene biosynthetic process (obsolete GO:0046259)","synonyms":[{"name":"trinitrotoluene anabolism","type":"exact"},{"name":"trinitrotoluene biosynthesis","type":"exact"},{"name":"trinitrotoluene biosynthetic process","type":"exact"},{"name":"trinitrotoluene formation","type":"exact"},{"name":"trinitrotoluene synthesis","type":"exact"}],"termid":"GO:0046259"}


id: MOD:00805
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-(N-acetylaminoglucosyl)-L-serine.","definition_xrefs":["PubMed:3086323","PubMed:8404891","RESID:AA0398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-serine","termid":"MOD:01675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(N-acetylamino)glucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-beta-D-glucopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) serine","type":"exact"},{"name":"CARBOHYD O-linked (HexNAc)","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(2-acetylamino-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O-(N-acetylamino)glucosyl-L-serine","type":"exact"},{"name":"O-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-seryl-beta-N-acetylglucosaminide","type":"exact"},{"name":"O3-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O3-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"OGlcNAcSer","type":"exact"}],"termid":"MOD:00805"}


id: GO:0009922
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66583,77931],"is_not":false,"summary":null,"term":"GO:0009922"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain acyl-CoA + H+ + malonyl-CoA = a very-long-chain 3-oxoacyl-CoA + CO2 + CoA. This reaction is the first (condensation) step of the four-step fatty acid elongation cycle in the endoplasmic reticulum that extends fatty acids of C-16 or longer with an additional 2-C unit.","definition_xrefs":["RHEA:32727","PMID:19763486","PMID:16564093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"fatty acid elongase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2046088","Reactome:R-HSA-548815","Reactome:R-HSA-2046094","MetaCyc:RXN-7697","Reactome:R-HSA-2046083","Reactome:R-HSA-2046100","Reactome:R-HSA-2046090","Reactome:R-HSA-548814","EC:2.3.1.199","Reactome:R-HSA-548800","Reactome:R-HSA-548830","Reactome:R-HSA-2046095"],"synonyms":[{"name":"ELOVL","type":"exact"},{"name":"condensing enzyme","type":"broad"},{"name":"elongation of very long chain fatty acids activity","type":"exact"},{"name":"very-long-chain 3-ketoacyl-CoA synthase","type":"exact"},{"name":"very-long-chain 3-oxoacyl-CoA synthase","type":"exact"},{"name":"very-long-chain beta-ketoacyl-CoA synthase","type":"exact"}],"termid":"GO:0009922","terms_by_termid":{"GO:0009922":null}}


id: PBO:0036165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0036165"}


id: GO:1904254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of an iron transmembrane transporter activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:15514116","GOC:BHF","GOC:kom"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of iron ion transmembrane transporter activity (obsolete GO:1904254)","synonyms":[{"name":"regulation of iron cation channel activity","type":"exact"},{"name":"regulation of iron channel activity","type":"exact"},{"name":"regulation of iron-specific channel activity","type":"exact"}],"termid":"GO:1904254"}


id: MONDO:0011402
data:
  {"annotated_genes":["SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87109],"is_not":false,"summary":null,"term":"MONDO:0011402"}]},"cv_name":"mondo","definition":"Congenital Cataracts Facial Dysmorphism Neuropathy (CCFDN) syndrome is a complex developmental disorder of autosomal recessive inheritance.","definition_xrefs":["Orphanet:48431"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic epicanthus (obsolete MONDO:0020165)","termid":"MONDO:0020165"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 16","termid":"MONDO:0016949"},{"relation_name":"is_a","term_name":"autosomal recessive degenerative and progressive cerebellar ataxia","termid":"MONDO:0020046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320","MONDO:0006025"],"is_obsolete":false,"name":"congenital cataracts-facial dysmorphism-neuropathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1858726","MEDGEN:346973","MESH:C565822","OMIM:604168","ICD9:759.89","SCTID:702433001","GARD:16645"],"synonyms":[{"name":"CCFDN","type":"exact"},{"name":"cataract, congenital, with Facial Dysmorphism and neuropathy","type":"related"},{"name":"congenital cataracts, facial dysmorphism, and neuropathy","type":"related"},{"name":"congenital cataracts-facial dysmorphism-neuropathy syndrome","type":"exact"}],"termid":"MONDO:0011402","terms_by_termid":{"MONDO:0011402":null},"xrefs":{"Monarch":{"xref_id":"0011402"}}}


id: GO:0170001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ergothioneine from one side of a membrane to the other.","definition_xrefs":["PMID:29530864","PMID:15795384","PMID:20601551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ergothioneine transmembrane transporter activity","termid":"GO:0170001"}


id: GO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme MAP kinase (MAPK).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK activity (obsolete GO:0000187)","synonyms":[{"name":"MAPK activation","type":"exact"},{"name":"activation of MAP kinase","type":"exact"},{"name":"activation of MAPK activity during sporulation","type":"narrow"}],"termid":"GO:0000187"}


id: PBO:0011127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted), DUF1773 family protein 1","termid":"PBO:0011127"}


id: PBO:0046373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 8","termid":"PBO:0046373"}


id: MONDO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short bowel syndrome (obsolete MONDO:0001077)","termid":"MONDO:0001077","xrefs":{"Monarch":{"xref_id":"0001077"}}}


id: PBO:0076570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3K","termid":"PBO:0076570"}


id: GO:0015533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: shikimate(out) + H+(out) = shikimate(in) + H+(in).","definition_xrefs":["TC:2.A.1.6.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"},{"relation_name":"is_a","term_name":"shikimate transmembrane transporter activity","termid":"GO:0015530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"shikimate:proton symporter activity","synonyms":[{"name":"shikimate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015533"}


id: PBO:0040053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 1","termid":"PBO:0040053"}


id: PBO:0044726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 15 (pseudogene)","termid":"PBO:0044726"}


id: PR:C6Y4B3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pga1 gene.","definition_xrefs":["UniProtKB:C6Y4B3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 2 subunit C167.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.09","synonyms":[{"name":"Spom972h-pga1","type":"exact"}],"termid":"PR:C6Y4B3"}


id: PBO:0075554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPEM family member 2","termid":"PBO:0075554"}


id: PR:Q9P7R8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gea1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7R8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C211.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.03c","synonyms":[{"name":"Spom972h-gea1","type":"exact"}],"termid":"PR:Q9P7R8"}


id: PBO:0090832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone Spt6","termid":"PBO:0090832"}


id: MONDO:0044816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of idiopathic torsion dystonia that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"},{"relation_name":"is_a","term_name":"idiopathic torsion dystonia","termid":"MONDO:0044811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"familial idiopathic torsion dystonia","secondary_identifiers":["MEDGEN:95980","UMLS:C0393598","SCTID:230318005","NCIT:C35437"],"synonyms":[{"name":"familial Idiopathic dystonia","type":"exact"},{"name":"genetic torsion dystonia","type":"related"},{"name":"hereditary idiopathic torsion dystonia","type":"exact"},{"name":"idiopathic familial dystonia","type":"exact"}],"termid":"MONDO:0044816","xrefs":{"Monarch":{"xref_id":"0044816"}}}


id: PBO:0029008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleoplasm","termid":"PBO:0029008"}


id: PBO:0073440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm like with four mbt domains 2","termid":"PBO:0073440"}


id: MONDO:0020599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of a coagulation factor that is not caused by genetic alterations. Causes include vitamin K deficiency, amyloidosis, and severe liver disease.","definition_xrefs":["NCIT:C34347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired coagulation factor deficiency","secondary_identifiers":["NANDO:1200896","MEDGEN:98","SCTID:25904003","UMLS:C0001169"],"synonyms":[{"name":"acquired coagulation factor deficiency","type":"exact"},{"name":"acquired coagulation protein disease","type":"exact"}],"termid":"MONDO:0020599","xrefs":{"Monarch":{"xref_id":"0020599"}}}


id: PBO:0063679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 3","termid":"PBO:0063679"}


id: GO:0051872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingosine metabolic process","termid":"GO:0006670"},{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"sphingoid catabolic process","termid":"GO:0046521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"sphingosine catabolic process","synonyms":[{"name":"(4E)-sphing-4-enine catabolic process","type":"exact"},{"name":"(4E)-sphing-4-enine catabolism","type":"exact"},{"name":"sphing-4-enine catabolic process","type":"exact"},{"name":"sphing-4-enine catabolism","type":"exact"}],"termid":"GO:0051872"}


id: GO:1905112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of centromere clustering at the nuclear envelope.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22375062"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of centromere clustering at the mitotic nuclear envelope (obsolete GO:1905112)","synonyms":[{"name":"regulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"regulation of centromere-SPB clustering","type":"related"},{"name":"regulation of kinetochore clustering at SPB","type":"related"},{"name":"regulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"regulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"regulation of kinetochore localization at spindle pole body","type":"related"},{"name":"regulation of rabl configuration","type":"related"}],"termid":"GO:1905112"}


id: PBO:0058772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7106","termid":"PBO:0058772"}


id: MONDO:0021666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral or bacterial infection that affects the external, middle, or inner ear. It may follow an upper respiratory infection. Signs and symptoms include pain, ear discharge, ear fullness, hearing loss, vertigo, nausea, and vomiting.","definition_xrefs":["NCIT:C27193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"disorder of ear","termid":"MONDO:0021205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear infection","secondary_identifiers":["MESH:D010031","UMLS:C0699744","MEDGEN:147064"],"synonyms":[{"name":"Ear infection","type":"exact"},{"name":"otitis","type":"exact"}],"termid":"MONDO:0021666","xrefs":{"Monarch":{"xref_id":"0021666"}}}


id: PBO:0072640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTCA antisense RNA 1","termid":"PBO:0072640"}


id: MONDO:0008806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aphalangy-hemivertebrae-urogenital-intestinal dysgenesis is an extremely rare congenital limb malformation syndrome, described in only 3 patients to date, and characterized by the association of hypoplasia or aplasia of the hand and foot phalanges, hemivertebrae and various urogenital and/or intestinal abnormalities (i.e. dysgenesis of the urogenital tract and rectum). There have been no further descriptions in the literature since 1991.","definition_xrefs":["Orphanet:1112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Aphalangy-hemivertebrae-urogenital-intestinal dysgenesis syndrome","secondary_identifiers":["UMLS:C1859754","GARD:3051","MESH:C535881","SCTID:733118006","MEDGEN:347225","OMIM:207620"],"synonyms":[{"name":"APHALANGY with hemivertebrae","type":"related"},{"name":"Aphalangy of the hands and feet, hemivertebrae, and visceral malformations","type":"related"},{"name":"Johnson Munson syndrome","type":"related"},{"name":"Johnson-Munson syndrome","type":"exact"}],"termid":"MONDO:0008806","xrefs":{"Monarch":{"xref_id":"0008806"}}}


id: PR:P87317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC31F10.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C31F10.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.16","synonyms":[{"name":"Spom972h-SPBC31F10.16","type":"exact"}],"termid":"PR:P87317"}


id: PBO:0109296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRP2 antisense RNA 1","termid":"PBO:0109296"}


id: PBO:0108513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and Rpd3L histone deacetylase subunit Rxt2","termid":"PBO:0108513"}


id: GO:0072430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a mitotic cell cycle G1/S transition DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in mitotic G1 DNA damage checkpoint (obsolete GO:0072430)","synonyms":[{"name":"detection of DNA damage stimulus involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"related"}],"termid":"GO:0072430"}


id: GO:0097485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of a neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:22790009","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"part_of","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection guidance","synonyms":[{"name":"neurite guidance","type":"narrow"},{"name":"neuron process guidance","type":"exact"},{"name":"neuron protrusion guidance","type":"exact"},{"name":"neuronal cell projection guidance","type":"exact"}],"termid":"GO:0097485"}


id: GO:0048806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the genitalia over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genitalia development","synonyms":[{"name":"genital development","type":"exact"}],"termid":"GO:0048806"}


id: PBO:0027409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027409"}


id: GO:0031707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an endothelin A receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"endothelin A receptor binding","synonyms":[{"name":"endothelin A receptor ligand","type":"narrow"},{"name":"endothelin-1 receptor binding","type":"exact"}],"termid":"GO:0031707"}


id: GO:0099639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptor from the endosome to the plasma membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor transport to plasma membrane","termid":"GO:0098877"},{"relation_name":"is_a","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor transport, endosome to plasma membrane","termid":"GO:0099639"}


id: PBO:0044637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decorin","termid":"PBO:0044637"}


id: PBO:0066722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 19","termid":"PBO:0066722"}


id: GO:2000071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response by callose deposition.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"defense response by callose deposition","termid":"GO:0052542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response by callose deposition","synonyms":[{"name":"regulation of callose deposition during defense response","type":"related"},{"name":"regulation of callose localization during defense response","type":"related"}],"termid":"GO:2000071"}


id: internal:interim
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interim","termid":"internal:interim"}


id: MONDO:1012341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal dysmyelination, non-human animal","termid":"MONDO:1011869"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysmyelination, cattle","secondary_identifiers":["OMIA:001247-9913"],"termid":"MONDO:1012341","xrefs":{"Monarch":{"xref_id":"1012341"}}}


id: PBO:0029984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_membrane_formation","termid":"PBO:0029984"}


id: FYPO:0004976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which depolymerization (i.e. removal of tubulin dimers) of microtubules extending in front of a moving spindle pole body occurs at a greater rate, or speed, than normal.","definition_xrefs":["GO:0036078","PMID:16611238","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0003194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body","synonyms":[{"name":"decreased microtubule stability ahead of moving spindle pole body","type":"related"},{"name":"decreased stability of forwards-extending microtubules","type":"related"},{"name":"increased microtubule shrinkage ahead of moving spindle pole body","type":"related"},{"name":"increased rate of forward-extending microtubule depolymerization","type":"exact"},{"name":"increased rate of microtubule catastrophe ahead of moving spindle pole body","type":"related"},{"name":"increased rate of microtubule depolymerisation ahead of moving spindle pole body","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving SPB","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0004976"}


id: PBO:0074924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 92","termid":"PBO:0074924"}


id: PBO:0067198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 262, pseudogene","termid":"PBO:0067198"}


id: PBO:0074984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-26","termid":"PBO:0074984"}


id: PBO:0041499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 71","termid":"PBO:0041499"}


id: PBO:0060751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 1","termid":"PBO:0060751"}


id: PBO:0089866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery CIA1/CFD1 fusion protein","termid":"PBO:0089866"}


id: PBO:0039069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC component 1","termid":"PBO:0039069"}


id: GO:0070147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling cysteine to cysteinyl-tRNA in a mitochondrion, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl-tRNA aminoacylation","termid":"GO:0006423"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0010467","GO:0140053","GO:0006399"],"is_obsolete":false,"name":"mitochondrial cysteinyl-tRNA aminoacylation","termid":"GO:0070147"}


id: GO:0016348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an imaginal disc-derived leg joint are generated and organized. The leg joint is a flexible region that separates the rigid sections of a leg to allow movement in a controlled manner. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived leg segmentation","termid":"GO:0036011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived leg joint morphogenesis","termid":"GO:0016348"}


id: GO:0110052
data:
  {"annotated_genes":["SJAG_04953","SJAG_00419","SJAG_00365"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95888,100327,106931],"is_not":false,"summary":null,"term":"GO:0110052"}]},"cv_name":"biological_process","definition":"A cellular process that, through single- or multi-step enzymatic reactions, repairs toxic endogenous compounds, formed as by-products of primary metabolism, by converting them into useful metabolites.","definition_xrefs":["GOC:ka","GOC:vw","PMID:23334546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolite repair","termid":"GO:0110051"},{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00365":null,"SJAG_00419":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"toxic metabolite repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110052","terms_by_termid":{"GO:0110052":null}}


id: GO:1900355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of methanofuran metabolic process","termid":"GO:1900354"},{"relation_name":"negatively_regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of methanofuran metabolic process","synonyms":[{"name":"down regulation of methanofuran metabolic process","type":"exact"},{"name":"down regulation of methanofuran metabolism","type":"exact"},{"name":"down-regulation of methanofuran metabolic process","type":"exact"},{"name":"down-regulation of methanofuran metabolism","type":"exact"},{"name":"downregulation of methanofuran metabolic process","type":"exact"},{"name":"downregulation of methanofuran metabolism","type":"exact"},{"name":"inhibition of methanofuran metabolic process","type":"narrow"},{"name":"inhibition of methanofuran metabolism","type":"exact"},{"name":"negative regulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900355"}


id: GO:0071043
data:
  {"annotated_genes":["SJAG_03745","SJAG_01830","SJAG_01064","SJAG_03984","SJAG_01521","SJAG_02622","SJAG_04360","SJAG_04321","SJAG_00701","SJAG_03939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75411,78026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071034"},{"annotations":[115706,113086,100095,70670,112185,118448,71231,103310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cryptic unstable transcripts (CUTs), which are transcribed from intergenic regions. Many intergenic regions are heavily transcribed, but the transcripts are rarely detected due to rapid degradation by the nuclear exosome.","definition_xrefs":["PMID:16973436","PMID:15935759","GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01521":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04321":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CUT metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0071043","terms_by_termid":{"GO:0071034":null,"GO:0071039":null}}


id: PBO:0036024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036024"}


id: SO:0001066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is rich in a particular amino acid or homopolymeric and greater than three residues in length.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"compositionally_biased_region_of_peptide","secondary_identifiers":["BS:00068"],"synonyms":[{"name":"compbias","type":"related"},{"name":"compositional bias","type":"related"},{"name":"compositionally biased","type":"related"},{"name":"compositionally biased region of peptide","type":"related"},{"name":"compositionally_biased_region","type":"exact"}],"termid":"SO:0001066"}


id: FYPO:0003714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to Skb1-containing lateral cortical nodes is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to lateral cortical node","termid":"FYPO:0003713"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to lateral cortical node, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cortical node abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003714"}


id: PBO:0012825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-removed_by","termid":"PBO:0012825"}


id: PATO:0001595
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality inhering in a bearer by virtue of the bearer's downward or backward or inward dimenision.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depth","termid":"PATO:0001595"}


id: PBO:0054085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1436","termid":"PBO:0054085"}


id: PBO:0070956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 11","termid":"PBO:0070956"}


id: MONDO:1011780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gallbladder mucocele, non-human animal","secondary_identifiers":["OMIA:001524"],"termid":"MONDO:1011780","xrefs":{"Monarch":{"xref_id":"1011780"}}}


id: PBO:0079051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 7-1","termid":"PBO:0079051"}


id: GO:0021652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 1. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 1 morphogenesis","termid":"GO:0021651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 formation","termid":"GO:0021652"}


id: MONDO:0015404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rapidly involuting congenital hemangiomas (RICH) are a distinctive type of congenital hemangioma that are fully formed in utero and differ from non-involuting congenital haemangiomas (NICH) mainly because they undergo rapid postnatal involution.","definition_xrefs":["Orphanet:141184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hemangioma","termid":"MONDO:0018715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rapidly involuting congenital hemangioma","secondary_identifiers":["DOID:0080895","UMLS:C1275421","MEDGEN:698687","NCIT:C172207","GARD:19958","SCTID:703294004"],"synonyms":[{"name":"RICH","type":"exact"},{"name":"rich","type":"exact"}],"termid":"MONDO:0015404","xrefs":{"Monarch":{"xref_id":"0015404"}}}


id: GO:0006334
data:
  {"annotated_genes":["SJAG_04272","SJAG_02198","SJAG_00942","SJAG_00303","SJAG_02314","SJAG_02906","SJAG_04257","SJAG_03542","SJAG_00336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70218,73403,73546,79164,91437,91438,96770,108049,114871],"is_not":false,"summary":null,"term":"GO:0006334"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome organization","termid":"GO:0034728"},{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00303":null,"SJAG_00336":null,"SJAG_00942":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02906":null,"SJAG_03542":null,"SJAG_04257":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"nucleosome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-774815"],"synonyms":[{"name":"histone chaperone","type":"related"},{"name":"nucleosome modeling","type":"exact"}],"termid":"GO:0006334","terms_by_termid":{"GO:0006334":null}}


id: MONDO:0035173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, intellectual disability malformation syndrome characterized by global developmental delay, intellectual disability, delayed speech and language development, epilepsy, autistic behavior, and moderate facial dysmorphism (including elongated face, narrow forehead, arched eyebrows, horizontal palpebral fissures, hypertelorism, epicanthus, midface flattening, short nose, long and featureless philtrum, thin upper lip, macrostomia, and prominent chin). Additional variable manifestations include microcephaly, hypotonia, hypertrichosis, and strabismus.","definition_xrefs":["Orphanet:531151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 9","termid":"MONDO:0016874"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9q21.13 microdeletion syndrome","secondary_identifiers":["ICD10CM:F78.1","MEDGEN:1803709","GARD:22212","UMLS:C5681312"],"termid":"MONDO:0035173","xrefs":{"Monarch":{"xref_id":"0035173"}}}


id: PBO:0084922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monocarboxylate/proton symporter of the plasma membrane; transport activity is dependent on the pH gradient across the membrane; mediates high-affinity uptake of carbon sources lactate, pyuvate, and acetate, and also of the micronutrient selenite, whose structure mimics that of monocarboxylates; expression and localization are tightly regulated, with transcription repression, mRNA degradation, and protein endocytosis and degradation all occurring in the presence of glucose","termid":"PBO:0084922"}


id: MONDO:0021636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.","definition_xrefs":["NCIT:C6958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrocytic tumor","secondary_identifiers":["Orphanet:94","MedDRA:10003571","DOID:3069","GARD:12928"],"synonyms":[{"name":"astrocytic neoplasm","type":"exact"},{"name":"astrocytic tumor","type":"exact"},{"name":"astrocytoma","type":"narrow"},{"name":"astrocytoma of brain","type":"exact"},{"name":"astrocytoma of cerebrum","type":"narrow"},{"name":"astrocytoma, no ICD-O subtype","type":"exact"},{"name":"astroglioma","type":"exact"}],"termid":"MONDO:0021636","xrefs":{"Monarch":{"xref_id":"0021636"}}}


id: PBO:0080486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5B1","termid":"PBO:0080486"}


id: PBO:0063705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 4","termid":"PBO:0063705"}


id: MONDO:0003465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"synovial sarcoma","termid":"MONDO:0010434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fibrous synovial sarcoma","secondary_identifiers":["MEDGEN:234267","NCIT:C6533","UMLS:C1333616","DOID:5484"],"synonyms":[{"name":"fibrous sarcoma of synovium","type":"exact"},{"name":"fibrous sarcoma of the synovium","type":"exact"}],"termid":"MONDO:0003465","xrefs":{"Monarch":{"xref_id":"0003465"}}}


id: PBO:0027322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytochrome-c_oxidase_activity","termid":"PBO:0027322"}


id: PBO:0075885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6GAL2 intronic transcript 1","termid":"PBO:0075885"}


id: MONDO:0018965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare renal disease characterized by glomerular nephropathy with hematuria progressing to end-stage renal disease (ESRD), frequently associated with sensorineural deafness, and occasionally with ocular anomalies.","definition_xrefs":["Orphanet:63"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Alport syndrome","secondary_identifiers":["MESH:D009394","NANDO:1200712","MedDRA:10001843","NANDO:2200126","UMLS:C1567741","DOID:10983","ICD10CM:Q87.81","MEDGEN:339209","OMIMPS:301050","NCIT:C34842","icd11.foundation:1170919425","NORD:756","GARD:5785"],"synonyms":[{"name":"Alport deafness-nephropathy","type":"exact"},{"name":"Alport syndrome","type":"exact"},{"name":"Alport's syndrome","type":"exact"},{"name":"hereditary nephritis","type":"broad"}],"termid":"MONDO:0018965","xrefs":{"Monarch":{"xref_id":"0018965"}}}


id: PBO:0001605
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed in response to nitrogen starvation","termid":"PBO:0001605"}


id: PBO:0070769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11 pseudogene 5","termid":"PBO:0070769"}


id: MOD:01727
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-126 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"derives_from","term_name":"cysTMT6plex-zero reporter+balance reagent cysteine disulfide","termid":"MOD:01822"},{"relation_name":"derives_from","term_name":"cysTMT6plex-126 reporter+balance reagent cysteine disulfide","termid":"MOD:01823"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-126 reporter fragment","type":"exact"}],"termid":"MOD:01727"}


id: PBO:0061451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 4 group A member 2","termid":"PBO:0061451"}


id: FYPO:0001055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis normally, in that the spindle forms normally and chromosomes condense normally, but then undergoes septation despite abnormal chromosome segregation, giving rise to a cut phenotype.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000004","FYPO:0000032","FYPO:0001320","FYPO:0000641","FYPO:0000337","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"cut following normal mitotic chromosome condensation","synonyms":[{"name":"cut following normal chromosome condensation during mitotic cell cycle","type":"exact"},{"name":"cut following normal entry into mitosis","type":"related"},{"name":"cut following normal mitotic chromosome condensation during vegetative growth","type":"exact"},{"name":"cut following normal mitotic entry","type":"related"},{"name":"cut with normal mitotic chromosome condensation","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation, with normal chromosome condensation","type":"exact"}],"termid":"FYPO:0001055"}


id: FYPO:0005166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the spatio-temporal pattern of localization of replication forks into nuclear foci is normal (i.e. indistinguishable from wild type). Normally, replication forks appear organized into foci outside the nucleolus in early S phase. As S phase progresses, the number of foci first increases, then decreases, and the remaining foci concentrate within the nucleolus or at the nucleolar periphery. The last replication foci remaining at the end of S phase are one or two large spots at the nucleolar border.","definition_xrefs":["PMID:17304223","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spatio-temporal regulation of replication fork localization","synonyms":[{"name":"normal replication foci dynamics","type":"related"},{"name":"normal replication focus organization","type":"related"},{"name":"normal spatio-temporal regulation of replication fork localisation","type":"exact"},{"name":"normal spatio-temporal regulation of replication fork localization during mitotic cell cycle","type":"related"},{"name":"normal spatio-temporal regulation of replication fork localization during vegetative growth","type":"exact"},{"name":"normal spatio-temporal replication fork organization","type":"related"}],"termid":"FYPO:0005166"}


id: MONDO:0100186
data:
  {"annotated_genes":["SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85748],"is_not":false,"summary":null,"term":"MONDO:0100186"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphenylalaninemia due to tetrahydrobiopterin deficiency","termid":"MONDO:0016543"},{"relation_name":"is_a","term_name":"GTP cyclohydrolase I deficiency","termid":"MONDO:0100184"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0004736"],"is_obsolete":false,"name":"GTP cyclohydrolase I deficiency with hyperphenylalaninemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2844","OMIM:233910","Orphanet:2102","SCTID:23447005","DOID:0112225","NCIT:C141442"],"synonyms":[{"name":"GTP cyclohydrolase 1 deficiency","type":"related"},{"name":"GTP cyclohydrolase I deficiency","type":"related"},{"name":"GTPCH deficiency","type":"exact"},{"name":"HPABH4B","type":"related"},{"name":"hyperphenylalaninemia due to GTP cyclohydrolase deficiency","type":"exact"},{"name":"hyperphenylalaninemia, BH4-deficient, B","type":"related"},{"name":"hyperphenylalaninemia, Bh4-deficient, type B","type":"exact"},{"name":"hyperphenylalaninemia, tetrahydrobiopterin-deficient, due to GTP cyclohydrolase 1 deficiency","type":"related"}],"termid":"MONDO:0100186","terms_by_termid":{"MONDO:0100186":null},"xrefs":{"Monarch":{"xref_id":"0100186"}}}


id: PBO:0041393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 putative open reading frame 64","termid":"PBO:0041393"}


id: PATO:0002473
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition to spontaneously arise.","definition_xrefs":["PATOC:NV"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, spontaneous","termid":"PATO:0002473"}


id: GO:0061061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a muscle structure over time, from its formation to its mature state. Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle structure development","termid":"GO:0061061"}


id: SO:1000040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tandem duplication where the individual regions are not in the same orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_duplication","termid":"SO:1000173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_tandem_duplication","synonyms":[{"name":"inverted tandem duplication","type":"exact"},{"name":"mirror duplication","type":"related"}],"termid":"SO:1000040"}


id: GO:0006679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylceramide metabolic process","termid":"GO:0006678"},{"relation_name":"is_a","term_name":"glycosylceramide biosynthetic process","termid":"GO:0046476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glucosylceramide biosynthetic process","synonyms":[{"name":"glucosylceramide anabolism","type":"exact"},{"name":"glucosylceramide biosynthesis","type":"exact"},{"name":"glucosylceramide formation","type":"exact"},{"name":"glucosylceramide synthesis","type":"exact"}],"termid":"GO:0006679"}


id: PATO:0001209
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001209 absolute function (obsolete PATO:0001209)","termid":"PATO:0001209"}


id: MONDO:0003613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diffuse peritoneal leiomyomatosis (obsolete MONDO:0003613)","termid":"MONDO:0003613","xrefs":{"Monarch":{"xref_id":"0003613"}}}


id: PR:Q9P6N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6N2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pdp3-interacting factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.14","synonyms":[{"name":"Spom972h-ptf1","type":"exact"}],"termid":"PR:Q9P6N2"}


id: GO:0032167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An amorphous-appearing accumulation of septin proteins at the future site of cytokinesis.","definition_xrefs":["PMID:16009555"],"gene_count":0,"genotype_count":0,"name":"obsolete septin patch (obsolete GO:0032167)","synonyms":[{"name":"septin patch","type":"exact"}],"termid":"GO:0032167"}


id: PBO:0031107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_DNA_damaging_agents","termid":"PBO:0031107"}


id: GO:0005938
data:
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id: GO:0045520
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id: PR:O94618
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id: PBO:0005064
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id: MONDO:0024357
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id: MONDO:0000666
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id: GO:0044842
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id: PBO:0014283
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id: PR:Q10258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methylenetetrahydrofolate reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21091:SF1","OMA:SCHPO00458","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.10","secondary_identifiers":["UniProtKB:Q10258"],"synonyms":[{"name":"Spom972h-MTHFR","type":"exact"}],"termid":"PR:Q10258"}


id: GO:0003084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the force with which blood travels through the systemic arterial circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood pressure","termid":"GO:0045777"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"}


id: GO:0120540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification, often by sulfation, of sugars in the polysaccharide chain component of chondroitin sulfate proteoglycans.","definition_xrefs":["PMID:38500384"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate proteoglycan biosynthetic process, enzymatic modification (obsolete GO:0120540)","termid":"GO:0120540"}


id: PBO:0073872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member C2 (putative)","termid":"PBO:0073872"}


id: PBO:0070330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 2","termid":"PBO:0070330"}


id: GO:0031424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ebc","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinization","secondary_identifiers":["Reactome:R-HSA-6805567"],"termid":"GO:0031424"}


id: GO:0016271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A permanent cessation of all vital functions of a tissue.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete tissue death (obsolete GO:0016271)","termid":"GO:0016271"}


id: GO:0052155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which an organism effects a change that affects cell-based immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of host cell-mediated immune response (obsolete GO:0052155)","synonyms":[{"name":"modulation by organism of cell-mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of host cell-based immune response","type":"exact"},{"name":"modulation by symbiont of host cell-mediated immune response","type":"exact"}],"termid":"GO:0052155"}


id: MONDO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extrinsic allergic alveolitis caused by infection with Aspergillus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary aspergilloma","termid":"MONDO:0000266"},{"relation_name":"is_a","term_name":"allergic bronchopulmonary aspergillosis","termid":"MONDO:0015243"},{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"malt worker's lung","secondary_identifiers":["DOID:2314","SCTID:25897000","ICD9:495.4","MEDGEN:510125","UMLS:C0155888"],"synonyms":[{"name":"Aspergillus caused extrinsic allergic alveolitis","type":"exact"},{"name":"Aspergillus extrinsic allergic alveolitis","type":"exact"},{"name":"Malt workers' lung","type":"exact"},{"name":"Malt-workers' lung","type":"exact"},{"name":"alveolitis due to aspergillus clavatus","type":"narrow"},{"name":"malt worker lung","type":"exact"},{"name":"malt workers lung","type":"exact"}],"termid":"MONDO:0002266","xrefs":{"Monarch":{"xref_id":"0002266"}}}


id: PBO:0066615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin Rho GTPase binding protein 1","termid":"PBO:0066615"}


id: GO:1904996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte adhesion to vascular endothelial cell.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","PMID:23897866","GOC:TermGenie","GOC:bc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"positively_regulates","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte adhesion to vascular endothelial cell","synonyms":[{"name":"activation of leukocyte adhesion to vascular endothelial cell","type":"narrow"},{"name":"up regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"up-regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"upregulation of leukocyte adhesion to vascular endothelial cell","type":"exact"}],"termid":"GO:1904996"}


id: MONDO:1012268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"androgen insensitivity syndrome, non-human animal","termid":"MONDO:1011919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen insensitivity syndrome, cattle","secondary_identifiers":["OMIA:000991-9913"],"synonyms":[{"name":"AIS, cattle","type":"exact"}],"termid":"MONDO:1012268","xrefs":{"Monarch":{"xref_id":"1012268"}}}


id: MOD:00616
data:
  {"annotated_genes":["SJAG_03012","SJAG_02902","SJAG_02980","SJAG_03524","SJAG_02763","SJAG_02592","SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[119605,119813,119603,119604,80901,119812,119602,80900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[80883,80775,80906,81066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues that are isobaric at a resolution below 0.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by isobaric sets","termid":"MOD:00538"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03012":null,"SJAG_03524":null,"SJAG_03632":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at a resolution below 0.1 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"termid":"MOD:00616","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null,"MOD:01154":null}}


id: MONDO:1040010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Van der Woude syndrome, popliteal pterygium syndrome, cleft lip with or without palate, or a spectrum of one or two of those conditions in which the cause of the disease is a mutation in the IRF6 gene.","definition_xrefs":["PMID:12219090","PMID:20301581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRF6-related condition","termid":"MONDO:1040010","xrefs":{"Monarch":{"xref_id":"1040010"}}}


id: PBO:0080541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 1 like","termid":"PBO:0080541"}


id: PBO:0069338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 598, pseudogene","termid":"PBO:0069338"}


id: PBO:0066733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 30","termid":"PBO:0066733"}


id: PBO:0060389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MZF1 antisense RNA 1","termid":"PBO:0060389"}


id: GO:0036337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand to a Fas receptor on the surface of the cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Fas is a death domain-containing member of the tumor necrosis factor receptor (TNFR) superfamily.","definition_xrefs":["GOC:nhn","Wikipedia:Fas_receptor","PMID:12040174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Fas signaling pathway","synonyms":[{"name":"Apo-1 signaling pathway","type":"exact"},{"name":"CD95 signaling pathway","type":"exact"},{"name":"FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"Fas receptor signaling pathway","type":"exact"},{"name":"Fas-FasL signaling pathway","type":"narrow"},{"name":"FasL signaling pathway","type":"related"},{"name":"FasR signaling pathway","type":"exact"}],"termid":"GO:0036337"}


id: MONDO:0020115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary polycythemia is an elevated absolute red blood cell mass caused by enhanced stimulation of red blood cell production by an otherwise normal erythroid lineage that may be congenital or acquired (congenital secondary polycythemia and acquired secondary polycythemia).","definition_xrefs":["Orphanet:98428"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic hematologic disease (obsolete MONDO:0015549)","termid":"MONDO:0015549"},{"relation_name":"is_a","term_name":"polycythemia","termid":"MONDO:0005571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"secondary polycythemia","secondary_identifiers":["MedDRA:10036062","MEDGEN:231144","NCIT:C27178","UMLS:C1318533","GARD:19467"],"synonyms":[{"name":"secondary erythrocytosis","type":"exact"},{"name":"secondary polycythemia","type":"exact"}],"termid":"MONDO:0020115","xrefs":{"Monarch":{"xref_id":"0020115"}}}


id: PBO:0034196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_ends_with","termid":"PBO:0034196"}


id: GO:0051229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the spindle during a meiotic cell cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"is_a","term_name":"spindle disassembly","termid":"GO:0051230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic spindle disassembly","synonyms":[{"name":"meiotic spindle breakdown","type":"exact"},{"name":"meiotic spindle catabolism","type":"exact"},{"name":"meiotic spindle degradation","type":"exact"},{"name":"spindle breakdown during meiosis","type":"exact"},{"name":"spindle degradation during meiosis","type":"exact"},{"name":"spindle disassembly during meiosis","type":"exact"}],"termid":"GO:0051229"}


id: MONDO:0045038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mycosis","termid":"MONDO:0000254"},{"relation_name":"is_a","term_name":"basidiobolomycosis","termid":"MONDO:0000302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous basidiobolomycosis","secondary_identifiers":["MEDGEN:575967","SCTID:240786004","UMLS:C0343966"],"termid":"MONDO:0045038","xrefs":{"Monarch":{"xref_id":"0045038"}}}


id: PBO:0070161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 75 pseudogene","termid":"PBO:0070161"}


id: MONDO:0004974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neuroendocrine neoplasm of the sympathetic nervous system that secretes catecholamines. It arises from the chromaffin cells of the adrenal medulla. Clinical presentation includes headaches, palpitations, chest and abdominal pain, hypertension, fever, and tremor. Microscopically, a characteristic nesting (zellballen) growth pattern is usually seen. Other growth patterns including trabecular pattern may also be present.","definition_xrefs":["NCIT:C3326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sympathetic paraganglioma","termid":"MONDO:0021072"},{"relation_name":"is_a","term_name":"adrenal medulla neoplasm","termid":"MONDO:0021237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal gland pheochromocytoma","secondary_identifiers":["UMLS:C4551683","MEDGEN:1636437","NANDO:2200078","EFO:0000239","DOID:0050892","ICDO:8700/0"],"synonyms":[{"name":"Intraadrenal paraganglioma","type":"exact"},{"name":"PCC","type":"exact"},{"name":"adrenal gland Chromaffinoma","type":"exact"},{"name":"adrenal gland chromaffin paraganglioma","type":"exact"},{"name":"adrenal gland paraganglioma","type":"exact"},{"name":"adrenal gland pheochromocytoma","type":"exact"},{"name":"adrenal medullary paraganglioma","type":"exact"},{"name":"adrenal medullary pheochromocytoma","type":"exact"},{"name":"adrenal pheochromocytoma","type":"exact"},{"name":"chromaffin paraganglioma of the adrenal gland","type":"exact"},{"name":"pheochromocytoma","type":"broad"},{"name":"pheochromocytoma (adrenal)","type":"exact"}],"termid":"MONDO:0004974","xrefs":{"Monarch":{"xref_id":"0004974"}}}


id: GO:0004620
data:
  {"annotated_genes":["SJAG_02093","SJAG_01219","SJAG_04110","SJAG_04323","SJAG_02100","SJAG_00321","SJAG_01519","SJAG_01198","SJAG_02161","SJAG_04292","SJAG_03204","SJAG_00199","SJAG_02091"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76085,78415],"is_not":false,"summary":null,"term":"GO:0004620"},{"annotations":[66314,65168,94246,114391,71144,67839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[109147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[98093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[73127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[76835,77738,71401,78886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[74673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[63264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a glycerophospholipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00321":null,"SJAG_01198":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_03204":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phospholipase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6786650","Reactome:R-HSA-6792445"],"termid":"GO:0004620","terms_by_termid":{"GO:0004435":null,"GO:0004620":null,"GO:0004622":null,"GO:0004623":null,"GO:0004630":null,"GO:0004767":null,"GO:0034479":null,"GO:0052714":null}}


id: PBO:0068867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 107, pseudogene","termid":"PBO:0068867"}


id: PBO:0052387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF26A divergent transcript","termid":"PBO:0052387"}


id: PBO:0048195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABPB1 intronic transcript","termid":"PBO:0048195"}


id: PBO:0069032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 277, pseudogene","termid":"PBO:0069032"}


id: FYPO:0006107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which haploid cells mate and undergo meiotic nuclear division and sporulation in the presence of nutrients, notably nitrogen and glucose. Normally, fission yeast mate, undergo meiosis, and sporulate only under conditions of nitrogen and carbon starvation.","definition_xrefs":["PMID:27613427","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"mating, meiosis, and sporulation without starvation","synonyms":[{"name":"conjugation, meiosis, and sporulation without starvation","type":"exact"},{"name":"deregulated sporulation","type":"related"},{"name":"mating, meiotic nuclear division, and sporulation without starvation","type":"exact"},{"name":"meiotic cell cycle in presence of nutrients","type":"exact"},{"name":"meiotic cell cycle without starvation","type":"exact"},{"name":"sporulation in presence of nutrients","type":"related"}],"termid":"FYPO:0006107"}


id: PBO:0062144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 14 pseudogene","termid":"PBO:0062144"}


id: PBO:0053784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1035","termid":"PBO:0053784"}


id: GO:0030337
data:
  {"annotated_genes":["SJAG_01823","SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71541,115740],"is_not":false,"summary":null,"term":"GO:0030337"}]},"cv_name":"molecular_function","definition":"An enzyme regulator activity that increases the processivity of polymerization by DNA polymerase, by allowing the polymerase to move rapidly along DNA while remaining topologically bound to it.","definition_xrefs":["PMID:8087839","GOC:mah","PMID:7903401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"positively_regulates","term_name":"DNA polymerase activity","termid":"GO:0034061"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01823":null,"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0016779"},{"rel_name":"regulates","termid":"GO:0140097"},{"rel_name":"positively_regulates","termid":"GO:0016779"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"positively_regulates","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"positively_regulates","termid":"GO:0140097"},{"rel_name":"regulates","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0140097","GO:0016779","GO:0098772","GO:0003824","GO:0030234","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"DNA polymerase processivity factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"processivity clamp","type":"exact"},{"name":"sliding clamp","type":"narrow"}],"termid":"GO:0030337","terms_by_termid":{"GO:0030337":null}}


id: GO:0044352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded, uncoated intracellular vesicle formed by the process of pinocytosis.","definition_xrefs":["PMID:14731589","PMID:14732047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005768","GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"pinosome","secondary_identifiers":["NIF_Subcellular:sao1925368674"],"synonyms":[{"name":"pinocytic vesicle","type":"exact"}],"termid":"GO:0044352"}


id: GO:0019848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts to inhibit neural function in another organism by inhibiting voltage-gated calcium ion channels and neurotransmitter release. This function is thought to be specific to the venom of two marine snail species.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete conotoxin activity (obsolete GO:0019848)","synonyms":[{"name":"conotoxin activity","type":"exact"}],"termid":"GO:0019848"}


id: MONDO:1012693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary melanoma that occurs in melanoma-bearing Libechov minipipgs due to selective breeding for the purpose of creating a swine model of hereditary metastatic melanoma.","definition_xrefs":["PMID:31717496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"congenital melanoma, pig","termid":"MONDO:1012162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma-bearing Libechov minipig, pig","secondary_identifiers":["OMIA:001480-9823"],"synonyms":[{"name":"MeLiM","type":"exact"}],"termid":"MONDO:1012693","xrefs":{"Monarch":{"xref_id":"1012693"}}}


id: PBO:0050268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 46","termid":"PBO:0050268"}


id: SO:0001091
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Binding site for any chemical group (co-enzyme, prosthetic group, etc.).","definition_xrefs":["EBIBS:GAR"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001091 non_covalent_binding_site (obsolete SO:0001091)","synonyms":[{"name":"binding","type":"related"},{"name":"binding site","type":"related"},{"name":"non covalent binding site","type":"exact"}],"termid":"SO:0001091"}


id: PBO:0044714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 1 (pseudogene)","termid":"PBO:0044714"}


id: MOD:01376
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a (2S,3S,4R)-3,4-dihydroxyisoleucine.","definition_xrefs":["PubMed:11320328","RESID:AA0447","ChEBI:141827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated isoleucine","termid":"MOD:01416"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3S,4R)-3,4-dihydroxyisoleucine","synonyms":[{"name":"(2S,3S,4R)-2-amino-3,4-dihydroxy-3-methylpentanoic acid","type":"exact"},{"name":"(2S,3S,4R)-3,4-dihydroxyisoleucine","type":"exact"},{"name":"(3S,4R)-3,4-dihydroxyisoleucine","type":"exact"},{"name":"MOD_RES (3S,4R)-3,4-dihydroxyisoleucine","type":"exact"},{"name":"beta,gamma-dihydroxyisoleucine","type":"exact"}],"termid":"MOD:01376"}


id: PBO:0069335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 595, pseudogene","termid":"PBO:0069335"}


id: GO:1901816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-zeacarotene.","definition_xrefs":["PMID:3710717","UniPathway:UPA00805","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-zeacarotene metabolic process","synonyms":[{"name":"beta-zeacarotene metabolism","type":"exact"}],"termid":"GO:1901816"}


id: SO:0001933
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A terminal region of DNA sequence where the end of the region is not blunt ended and the exposed single strand terminates at the 3' end.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_single_strand_overhang","termid":"SO:0001695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_three_prime_single_strand_overhang","synonyms":[{"name":"restriction enzyme three prime single strand overhang","type":"exact"}],"termid":"SO:0001933"}


id: FYPO:0008250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more protein-coding genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25356590","PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at protein coding gene","termid":"FYPO:0008250"}


id: GO:0031857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 parathyroid hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parathyroid hormone receptor binding","termid":"GO:0031856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 parathyroid hormone receptor binding","synonyms":[{"name":"type 1 parathyroid hormone receptor ligand","type":"narrow"}],"termid":"GO:0031857"}


id: MONDO:0017795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common odontogenic tumor, arising from the epithelial component of the embryonic tooth and usually affecting the molar-ramus region of the mandible or maxilla. Although most ameloblastomas are morphologically and clinically benign, they may cause extensive local destruction, recur, or metastasize.","definition_xrefs":["NCIT:C4313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system benign neoplasm","termid":"MONDO:0000636"},{"relation_name":"is_a","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ameloblastoma","secondary_identifiers":["ICDO:9310/0","GARD:5747","MEDGEN:1457","NORD:764","DOID:0050894","MESH:D000564","Orphanet:314419","SCTID:285311001","MedDRA:10066796","UMLS:C0002448"],"synonyms":[{"name":"Adenoameloblastoma","type":"related"},{"name":"adamantinoma","type":"related"},{"name":"adenomatoid odontogenic tumor","type":"related"},{"name":"adenomatoid odontogenic tumour","type":"related"},{"name":"ameloblastoma","type":"exact"},{"name":"ameloblastoma of jaw","type":"exact"},{"name":"aot","type":"related"}],"termid":"MONDO:0017795","xrefs":{"Monarch":{"xref_id":"0017795"}}}


id: MONDO:0012571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the NME8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 6","secondary_identifiers":["UMLS:C1970506","GARD:15502","MESH:C567057","DOID:0110606","MEDGEN:370930","OMIM:610852"],"synonyms":[{"name":"CILD6","type":"exact"},{"name":"NME8 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 6","type":"related"},{"name":"ciliary dyskinesia, primary, type 6","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in NME8","type":"exact"},{"name":"primary ciliary dyskinesia type 6","type":"exact"}],"termid":"MONDO:0012571","xrefs":{"Monarch":{"xref_id":"0012571"}}}


id: MONDO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alveolar echinococcosis (obsolete MONDO:0001448)","termid":"MONDO:0001448","xrefs":{"Monarch":{"xref_id":"0001448"}}}


id: PBO:0047952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(18)(q21.3)","termid":"PBO:0047952"}


id: MONDO:0016366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal phenylketonuria (PKU) is a rare disorder of phenylalanine metabolism, an inborn error of amino acid metabolism, characterized by the development of microcephaly, growth retardation, congenital heart disease, facial dysmorphism and intellectual disability in nonphenylketonuric offspring of mothers with excess phenylalanine (Phe) concentrations.","definition_xrefs":["Orphanet:2209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0006025"],"is_obsolete":false,"name":"maternal phenylketonuria","secondary_identifiers":["icd11.foundation:1509230254","GARD:3413","MESH:D017042","UMLS:C0085547","MEDGEN:88435"],"synonyms":[{"name":"hyperphenylalaninemic embryopathy","type":"exact"},{"name":"maternal PKU","type":"exact"},{"name":"maternal hyperphenylalaninemia","type":"exact"},{"name":"phenylketonuric embryopathy","type":"exact"}],"termid":"MONDO:0016366","xrefs":{"Monarch":{"xref_id":"0016366"}}}


id: PBO:0061461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRAS proto-oncogene, GTPase","termid":"PBO:0061461"}


id: PBO:0016938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSchizosaccharomyces specific protein","termid":"PBO:0016938"}


id: PBO:0073818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 19","termid":"PBO:0073818"}


id: GO:0071709
data:
  {"annotated_genes":["SJAG_04080","SJAG_03688","SJAG_00114","SJAG_03746","SJAG_01050","SJAG_00900","SJAG_01242","SJAG_01769","SJAG_01467","SJAG_00971","SJAG_03915","SJAG_02241","SJAG_02529","SJAG_04489","SJAG_04010","SJAG_02248","SJAG_05207","SJAG_00416","SJAG_03783","SJAG_03536","SJAG_04922","SJAG_04470","SJAG_01745","SJAG_02736","SJAG_04615","SJAG_02320","SJAG_03891","SJAG_00663","SJAG_00826","SJAG_04781","SJAG_03892","SJAG_04275","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107703,97876,99150,105614,114259,91614,100226,97913,102029,95696,110441,118865,119166,119348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[119935,119932,98281,91667,96285,103466,101212,106887,119933,119934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"},{"annotations":[72504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031468"},{"annotations":[91052],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[117259],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[106341,116300,100160,100161,94828,100443],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"membrane biogenesis","termid":"GO:0044091"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00416":null,"SJAG_00663":null,"SJAG_00826":null,"SJAG_00900":null,"SJAG_00971":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02736":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04489":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"membrane assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32243490":null},"termid":"GO:0071709","terms_by_termid":{"GO:0007084":null,"GO:0031468":null,"GO:0032120":null,"GO:0070583":null,"GO:1903023":null,"GO:1903024":null}}


id: PBO:0111836
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO interaction motif","termid":"PBO:0111836"}


id: PBO:0067211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 277, pseudogene","termid":"PBO:0067211"}


id: PBO:0091058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog Lvs1","termid":"PBO:0091058"}


id: PBO:0005113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mcp2","termid":"PBO:0005113"}


id: MONDO:1010780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia areata that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia areata, non-human animal","termid":"MONDO:1010140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia areata, horse","secondary_identifiers":["OMIA:001702-9796"],"termid":"MONDO:1010780","xrefs":{"Monarch":{"xref_id":"1010780"}}}


id: GO:0030661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a chitosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"chitosome","termid":"GO:0045009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chitosome membrane","termid":"GO:0030661"}


id: MONDO:0034968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare ocular motility/alignment disorder (obsolete MONDO:0034968)","secondary_identifiers":["Orphanet:519355"],"termid":"MONDO:0034968","xrefs":{"Monarch":{"xref_id":"0034968"}}}


id: PBO:0031466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_bafilomycin_A1","termid":"PBO:0031466"}


id: FYPO:0003477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to an arsenic-containing substance such as arsenate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to arsenic-containing substance","synonyms":[{"name":"abolished protein phosphorylation during cellular response to arsenate","type":"narrow"},{"name":"abolished protein phosphorylation during cellular response to arsenic-containing substance during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to arsenic-containing substance during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to arsenic-containing substance","type":"exact"}],"termid":"FYPO:0003477"}


id: PBO:0048677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase","termid":"PBO:0048677"}


id: PBO:0088337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane heat shock protein Hsp9","termid":"PBO:0088337"}


id: GO:0042043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurexin, a synaptic cell surface protein related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals.","definition_xrefs":["GOC:curators","GOC:pr","PMID:18923512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"neurexin family protein binding","secondary_identifiers":["GO:0019963"],"synonyms":[{"name":"neuroligin","type":"related"}],"termid":"GO:0042043"}


id: MONDO:0005410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute graft vs. host disease (obsolete MONDO:0005410)","termid":"MONDO:0005410","xrefs":{"Monarch":{"xref_id":"0005410"}}}


id: PBO:0075771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF2 pseudogene 1","termid":"PBO:0075771"}


id: GO:2000462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of eukaryotic cell surface binding (obsolete GO:2000462)","synonyms":[{"name":"positive regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000462"}


id: MONDO:0032733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"global developmental delay, progressive ataxia, and elevated glutamine","secondary_identifiers":["MEDGEN:1680160","OMIM:618412","UMLS:C5193080"],"synonyms":[{"name":"GDPAG","type":"related"},{"name":"GLOBAL DEVELOPMENTAL DELAY, PROGRESSIVE ATAXIA, AND ELEVATED GLUTAMINE","type":"related"},{"name":"Glutaminase Deficiency With Impaired Intellectual Development and Progressive Ataxia","type":"related"}],"termid":"MONDO:0032733","xrefs":{"Monarch":{"xref_id":"0032733"}}}


id: GO:0038162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by erythropoietin (EPO) binding to the erythropoietin receptor (EPO-R) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","PMID:12489509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to erythropoietin","termid":"GO:0036018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"erythropoietin-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9006335"],"synonyms":[{"name":"EPO-R signaling pathway","type":"exact"},{"name":"erythropoietin receptor signaling pathway","type":"exact"}],"termid":"GO:0038162"}


id: PBO:0065840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 5","termid":"PBO:0065840"}


id: GO:0090528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a smooth septate junction, a septate junction that lacks the regular arrays of electron-dense septae found in pleated septate junctions.","definition_xrefs":["PMID:22854041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septate junction assembly","termid":"GO:0019991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"smooth septate junction assembly","termid":"GO:0090528"}


id: MONDO:0009293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myophosphorylase deficiency (McArdle's disease), or glycogen storage disease type 5 (GSD5), is a severe form of glycogen storage disease characterized by exercise intolerance.","definition_xrefs":["Orphanet:368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease V","secondary_identifiers":["OMIM:232600","SCTID:55912009","UMLS:C0017924","MESH:D006012","NANDO:1200828","NCIT:C84738","DOID:2746","MedDRA:10018462","NANDO:2200541","MEDGEN:5341","GARD:6528"],"synonyms":[{"name":"GSD 5","type":"related"},{"name":"GSD due to muscle glycogen phosphorylase deficiency","type":"exact"},{"name":"GSD type 5","type":"exact"},{"name":"GSD type V","type":"exact"},{"name":"GSD5","type":"related"},{"name":"McArdle disease","type":"exact"},{"name":"McArdle type glycogen storage disease","type":"related"},{"name":"McArdle's disease","type":"exact"},{"name":"Mcardle disease","type":"exact"},{"name":"PYGM glycogen storage disease","type":"exact"},{"name":"Pygm deficiency","type":"related"},{"name":"glycogen storage disease 5","type":"related"},{"name":"glycogen storage disease V","type":"exact"},{"name":"glycogen storage disease caused by mutation in PYGM","type":"exact"},{"name":"glycogen storage disease due to muscle glycogen phosphorylase deficiency","type":"related"},{"name":"glycogen storage disease type 5","type":"exact"},{"name":"glycogen storage disease type V","type":"exact"},{"name":"glycogen storage disease, type V","type":"exact"},{"name":"glycogenosis due to muscle glycogen phosphorylase deficiency","type":"exact"},{"name":"glycogenosis type 5","type":"exact"},{"name":"glycogenosis type V","type":"exact"},{"name":"muscle glycogen phosphorylase deficiency","type":"related"},{"name":"myophosphorylase deficiency","type":"exact"}],"termid":"MONDO:0009293","xrefs":{"Monarch":{"xref_id":"0009293"}}}


id: MONDO:0054802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"erythrocytosis, familial, 7","secondary_identifiers":["OMIM:617981","UMLS:C4693823","DOID:0111631","MEDGEN:1642594"],"synonyms":[{"name":"ECYT7","type":"related"},{"name":"erythrocytosis 7","type":"exact"},{"name":"erythrocytosis, Alpha-globin type","type":"related"},{"name":"erythrocytosis, FAMILIAL, 7","type":"related"},{"name":"polycythemia, Alpha-globin type","type":"related"}],"termid":"MONDO:0054802","xrefs":{"Monarch":{"xref_id":"0054802"}}}


id: PBO:0078368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 12-1","termid":"PBO:0078368"}


id: GO:0004136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyadenosine + ATP = ADP + dAMP + 2 H+.","definition_xrefs":["EC:2.7.1.76","RHEA:23452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside kinase activity","termid":"GO:0019136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"deoxyadenosine kinase activity","secondary_identifiers":["KEGG_REACTION:R02089","MetaCyc:DEOXYADENOSINE-KINASE-RXN"],"synonyms":[{"name":"ATP:deoxyadenosine 5'-phosphotransferase activity","type":"related"},{"name":"deoxyadenosine kinase (phosphorylating)","type":"related"},{"name":"purine-deoxyribonucleoside kinase activity","type":"related"}],"termid":"GO:0004136"}


id: GO:0021848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the subpallium area of the forebrain. The interneuron precursors that these cells give rise to include GABAergic interneurons and will migrate tangentially.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","PMID:12626695","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"},{"relation_name":"part_of","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in subpallium","synonyms":[{"name":"neuroblast division in the ventral telencephalon","type":"exact"}],"termid":"GO:0021848"}


id: PBO:0077566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 272","termid":"PBO:0077566"}


id: GO:0052727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-antheraxanthin = all-trans-capsanthin.","definition_xrefs":["RHEA:17373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"capsanthin synthase activity","secondary_identifiers":["MetaCyc:RXN-7947"],"synonyms":[{"name":"CCS","type":"broad"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"}],"termid":"GO:0052727"}


id: GO:1905070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an anterior visceral endoderm cell from one site to another.","definition_xrefs":["GO_REF:0000091","GOC:TermGenie","PMID:17078044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior visceral endoderm cell migration","termid":"GO:1905070"}


id: PBO:0048665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G kinase anchoring protein 1","termid":"PBO:0048665"}


id: GO:0097275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of ammonium within a cell.","definition_xrefs":["GOC:yaf","PMID:12695560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"ammonium homeostasis","termid":"GO:0097272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular ammonium homeostasis","synonyms":[{"name":"cellular ammonia homeostasis","type":"exact"},{"name":"cellular ammonium homeostasis","type":"exact"}],"termid":"GO:0097275"}


id: GO:0052781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any chitobiose, a family of compounds derived from chitin and based on the structure of D-glucosaminyl-(1->4)-D-glucosamine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitobiose metabolic process","termid":"GO:0052780"},{"relation_name":"is_a","term_name":"amino disaccharide catabolic process","termid":"GO:0052782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitobiose catabolic process","termid":"GO:0052781"}


id: PBO:0079038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (AAC) 7-1","termid":"PBO:0079038"}


id: PBO:0063426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4D interacting protein","termid":"PBO:0063426"}


id: GO:0019812
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex composed of two copies of a restriction (R) subunit, two copies of a methylation (M) subunit, and one copy of a specificity (S) subunit. This complex recognizes specific short DNA sequences (through the S subunit), and binds to them. If the recognition site is hemimethylated, the complex acts as a methyltransferase which modifies the recognition site, using S-adenosylmethionine as the methyl donor. Only the M and S subunits are required for this reaction. If the complex binds to an unmethylated recognition site, then the complex translocates the DNA bidirectionally in an ATP-dependent manner. When the translocation is stalled by impact with another complex or unusual DNA structure, the enzyme functions as an endonuclease and cleavage of the DNA will occur, hundreds or thousands of base pairs away from the recognition site. These DNA restriction systems are used by bacteria to defend against phage and other foreign DNA that may enter a cell.","definition_xrefs":["PMID:15788748","PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"type I site-specific deoxyribonuclease complex","synonyms":[{"name":"type I restriction enzyme complex","type":"exact"}],"termid":"GO:0019812"}


id: PBO:0048041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSIP2 antisense RNA 2","termid":"PBO:0048041"}


id: MONDO:0013500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 51","secondary_identifiers":["DOID:0111996","UMLS:C4310803","MEDGEN:934770","OMIM:613953","GARD:15732"],"synonyms":[{"name":"CANDF5","type":"related"},{"name":"IMD51","type":"related"},{"name":"candidiasis, familial chronic mucocutaneous, autosomal recessive","type":"related"},{"name":"candidiasis, familial, 5","type":"related"},{"name":"candidiasis, familial, 5, formerly","type":"related"},{"name":"candidiasis, familial, type 5","type":"related"},{"name":"immunodeficiency 51","type":"exact"}],"termid":"MONDO:0013500","xrefs":{"Monarch":{"xref_id":"0013500"}}}


id: PATO:0002533
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A multipartite quality inhering in a bearer by virtue of the bearer being divided into two parts.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multipartite","termid":"PATO:0002510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipartite","termid":"PATO:0002533"}


id: GO:0045580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte differentiation","termid":"GO:0045619"},{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"regulates","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell differentiation","synonyms":[{"name":"regulation of T cell development","type":"related"},{"name":"regulation of T lymphocyte differentiation","type":"exact"},{"name":"regulation of T-cell differentiation","type":"exact"},{"name":"regulation of T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045580"}


id: MONDO:1012183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"subacute progressive myopathy, non-human animal","termid":"MONDO:1011792"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute progressive myopathy, dog","secondary_identifiers":["OMIA:000696-9615"],"termid":"MONDO:1012183","xrefs":{"Monarch":{"xref_id":"1012183"}}}


id: GO:0016187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Internalization of the contents of a synaptic vesicle into the postsynaptic membrane following endocytosis.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle internalization (obsolete GO:0016187)","synonyms":[{"name":"synaptic vesicle internalization","type":"exact"}],"termid":"GO:0016187"}


id: MONDO:0009101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Wolfram syndrome in which the cause of the disease is a mutation in the WFS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"Wolfram syndrome","termid":"MONDO:0018105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolfram syndrome 1","secondary_identifiers":["MEDGEN:1641635","OMIM:222300","DOID:0110629","UMLS:C4551693"],"synonyms":[{"name":"WFS1","type":"exact"},{"name":"WFS1 Wolfram syndrome","type":"exact"},{"name":"WOLFRAM syndrome 1","type":"related"},{"name":"Wfs","type":"related"},{"name":"Wolfram syndrome 1","type":"exact"},{"name":"Wolfram syndrome caused by mutation in WFS1","type":"exact"},{"name":"Wolfram syndrome type 1","type":"exact"},{"name":"diabetes insipidus and mellitus with optic atrophy and deafness","type":"related"}],"termid":"MONDO:0009101","xrefs":{"Monarch":{"xref_id":"0009101"}}}


id: PBO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain","termid":"PBO:0001519"}


id: GO:0090433
data:
  {"annotated_genes":["SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105925],"is_not":false,"summary":null,"term":"GO:0090433"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + palmitic acid + CoA = AMP + diphosphate + palmitoyl-CoA.","definition_xrefs":["PMID:18071249","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid-CoA ligase activity","termid":"GO:0004467"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"palmitoyl-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-434382"],"synonyms":[{"name":"palmitoyl-CoA synthetase activity","type":"exact"}],"termid":"GO:0090433","terms_by_termid":{"GO:0090433":null}}


id: PBO:0087047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L22A; required for translation of long 5' UTR of IME1 mRNA and meiotic entry; autoregulates splicing of its pre-m-RNA; homologous to mammalian ribosomal protein L22, no bacterial homolog; RPL22B has a paralog, RPL22A, that arose from the whole genome duplication","termid":"PBO:0087047"}


id: PBO:0027759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein_during_meiotic_cell_cycle","termid":"PBO:0027759"}


id: GO:0010395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhamnogalacturonan I (RGI), a branched pectin with a backbone of alternating alpha-(1->2)-linked rhamnose and alpha-(1->4)-linked D-galacturonic acid residues that carries neutral side-chains of predominantly beta-(1->4)-D-galactose and/or alpha-(1->5)-L-arabinose residues attached to the rhamnose residues of the RGI backbone.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"cell wall pectin metabolic process","termid":"GO:0052546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan I metabolic process","synonyms":[{"name":"RGI metabolism","type":"related"},{"name":"rhamnogalacturonan I metabolism","type":"exact"}],"termid":"GO:0010395"}


id: PBO:0113149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Cdc42p; activates Cdc42p in early G1, accounting for the first stage of biphasic activation, with Cdc24p accounting for the second stage in late G1; involved in the Cdc42p-mediated assembly of the axial landmark that dictates the site for the next round of budding, resulting in the axial budding pattern in haploids; localizes with septins to the bud neck contractile ring in mitosis","termid":"PBO:0113149"}


id: MONDO:0005124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leprosy is a chronic infectious disease affecting primarily the skin and peripheral nervous system.","definition_xrefs":["Orphanet:548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy","secondary_identifiers":["NORD:1362","DOID:1024","ICD10CM:A30","MedDRA:10024229","SCTID:81004002","EFO:0001054","NCIT:C84824","GARD:6886","MEDGEN:6049","icd11.foundation:149072669","ICD9:030.8","ICD9:030","ICD9:030.9","MESH:D007918","UMLS:C0023343"],"synonyms":[{"name":"Hansen disease","type":"exact"},{"name":"Hansen's disease","type":"exact"},{"name":"Mycobacterium leprae caused disease or disorder","type":"exact"},{"name":"Mycobacterium leprae disease or disorder","type":"exact"},{"name":"Mycobacterium leprae infectious disease","type":"exact"}],"termid":"MONDO:0005124","xrefs":{"Monarch":{"xref_id":"0005124"}}}


id: PBO:0117061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOL4L antisense RNA 1","termid":"PBO:0117061"}


id: PBO:0040328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 3","termid":"PBO:0040328"}


id: GO:0005691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U6atac, the Lsm2-8 heptameric ring complex, as well as several proteins that are unique to the U6atac snRNP, most of which remain associated with the U6atac snRNA both while the U6atac snRNP is free or assembled into the U4atac/U6atac snRNP or into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U6atac snRNP","synonyms":[{"name":"snRNP U6atac","type":"exact"}],"termid":"GO:0005691"}


id: FYPO:0003544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of double-strand breaks in DNA is greater than normal during a meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of double-strand break sites","termid":"FYPO:0003543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of double-strand break sites during meiotic cell cycle","synonyms":[{"name":"accumulation of DNA damage foci during meiotic cell cycle","type":"related"},{"name":"accumulation of double-strand break sites during meiotic cell cycle","type":"exact"},{"name":"increased number of DNA damage foci during meiotic cell cycle","type":"related"},{"name":"increased number of double-strand break sites during meiosis","type":"related"},{"name":"increased number of meiotic double-strand break sites","type":"exact"},{"name":"increased number of meiotic double-strand breaks","type":"exact"}],"termid":"FYPO:0003544"}


id: GO:0015154
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[75898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of disaccharide from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transmembrane transporter activity","termid":"GO:0015157"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"disaccharide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015154","terms_by_termid":{"GO:0005364":null,"GO:0008506":null}}


id: PBO:0035878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_telomere_during_vegetative_growth","termid":"PBO:0035878"}


id: MONDO:0020341
data:
  {"annotated_genes":["SJAG_01025","SJAG_02824","SJAG_04600","SJAG_03970","SJAG_02160","SJAG_01360"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85369,85368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011966"},{"annotations":[87295,87294,87296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014966"},{"annotations":[86597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032588"}]},"cv_name":"mondo","definition":"Periventricular nodular heterotopia (PNH) is a brain malformation, due to abnormal neuronal migration, in which a subset of neurons fails to migrate into the developing cerebral cortex and remains as nodules that line the ventricular surface. Classical PNH is a rare X-linked dominant disorder far more frequent in females who present normal intelligence to borderline intellectual deficit, epilepsy of variable severity and extra-central nervous system signs, especially cardiovascular defects or coagulopathy. The disorder is generally associated with prenatal lethality in males.","definition_xrefs":["Orphanet:98892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"nodular neuronal heterotopia","termid":"MONDO:0016292"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01025":null,"SJAG_01360":null,"SJAG_02160":null,"SJAG_02824":null,"SJAG_03970":null,"SJAG_04600":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"periventricular nodular heterotopia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12724","NANDO:1201079","icd11.foundation:20200096","MESH:D054091","OMIMPS:300049","MEDGEN:358387","UMLS:C1868720","DOID:0050454","MedDRA:10066854"],"synonyms":[{"name":"periventricular heterotopia","type":"exact"},{"name":"periventricular nodular heterotopia","type":"exact"}],"termid":"MONDO:0020341","terms_by_termid":{"MONDO:0011966":null,"MONDO:0014966":null,"MONDO:0032588":null},"xrefs":{"Monarch":{"xref_id":"0020341"}}}


id: PBO:0050210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 27","termid":"PBO:0050210"}


id: PBO:0085397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane (PM) ubiquitin ligase-substrate adaptor; involved in cell wall chitin deposition; ubiquitinates and down-regulates chitin synthase Chs3p abundance at PM via calcineurin/Crz1 signaling pathway which regulates RCR1 expression; delivered to PM by exomer complex using novel PM sorting motif; RCR1 has a paralog, RCR2, that arose from the whole genome duplication","termid":"PBO:0085397"}


id: PBO:0035719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_ubiquitination_during_vegetative_growth","termid":"PBO:0035719"}


id: PBO:0080673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP homolog associated with actin, golgi membranes and microtubules","termid":"PBO:0080673"}


id: PATO:0000140
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's spatial location relative to other objects in the vicinity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"position","secondary_identifiers":["PATO:0001631","PATO:0001032"],"synonyms":[{"name":"location","type":"exact"},{"name":"placement","type":"exact"},{"name":"relational spatial quality","type":"exact"}],"termid":"PATO:0000140"}


id: SO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-functional descendant of an exon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_region","termid":"SO:0000462"},{"relation_name":"non_functional_homolog_of","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decayed_exon","synonyms":[{"name":"decayed exon","type":"exact"}],"termid":"SO:0000464"}


id: _global:has_gene_product
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x has gene product y if and only if x is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"_global:genomically_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_gene_product","secondary_identifiers":["RO:0002205"],"termid":"_global:has_gene_product"}


id: PBO:0004435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1A","termid":"PBO:0004435"}


id: MONDO:0005338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic outflow obstruction of the eye's drainage canals that can lead to increased internal eye pressure and optic nerve damage.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"open-angle glaucoma","secondary_identifiers":["UMLS:C0017612","EFO:0004190","MEDGEN:6611","ICD9:365.10","MESH:D005902","ICD9:365.1","NCIT:C34641","DOID:1067","SCTID:46168003","SCTID:84494001","ICD9:365.13"],"synonyms":[{"name":"POAG","type":"exact"},{"name":"glaucoma simplex","type":"exact"},{"name":"glaucoma, primary open angle","type":"exact"},{"name":"open angle glaucoma","type":"exact"},{"name":"pigmentary glaucoma","type":"exact"},{"name":"primary open angle glaucoma","type":"exact"},{"name":"wide-angle glaucoma","type":"exact"}],"termid":"MONDO:0005338","xrefs":{"Monarch":{"xref_id":"0005338"}}}


id: MOD:00418
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an (pyridin-3-yl)acetyl group.","definition_xrefs":["PubMed:9276974","Unimod:25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridylacetylated residue","synonyms":[{"name":"Pyridylacetyl","type":"related"},{"name":"pyridylacetyl","type":"related"}],"termid":"MOD:00418"}


id: MONDO:0012307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial scaphocephaly syndrome, McGillivray type is a rare newly described craniosynostosis syndrome characterized by scaphocephaly, macrocephaly, severe maxillary retrusion, and mild intellectual disability.","definition_xrefs":["Orphanet:168624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial scaphocephaly syndrome","termid":"MONDO:0015704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"familial scaphocephaly syndrome, McGillivray type","secondary_identifiers":["MESH:C566511","icd11.foundation:512057922","MEDGEN:355365","OMIM:609579","UMLS:C1865070","GARD:3426"],"synonyms":[{"name":"scaphocephaly, maxillary retrusion, and intellectual disability","type":"related"},{"name":"scaphocephaly, maxillary retrusion, and mental retardation","type":"related"},{"name":"scaphocephaly-macrocephaly-maxillary retrusion-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0012307","xrefs":{"Monarch":{"xref_id":"0012307"}}}


id: PR:P08463
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- suc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P08463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinases regulatory subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.14c","synonyms":[{"name":"P13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-suc1","type":"exact"}],"termid":"PR:P08463"}


id: MONDO:0021225
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the uvea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveal disorder","termid":"MONDO:0002661"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"uvea neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0042162","MEDGEN:52960","NCIT:C3436"],"synonyms":[{"name":"neoplasm of the uvea","type":"exact"},{"name":"neoplasm of uvea","type":"exact"},{"name":"tumor of the uvea","type":"exact"},{"name":"tumor of uvea","type":"exact"},{"name":"tumour of the uvea","type":"exact"},{"name":"tumour of uvea","type":"exact"},{"name":"uvea neoplasm (disease)","type":"exact"},{"name":"uvea tumor","type":"exact"},{"name":"uvea tumour","type":"exact"},{"name":"uveal neoplasm","type":"exact"},{"name":"uveal tumor","type":"exact"},{"name":"uveal tumour","type":"exact"}],"termid":"MONDO:0021225","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0021225"}}}


id: SO:0002243
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 23S_rRNA, which functions as a component of the large subunit of the ribosome in prokaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_23S_gene","synonyms":[{"name":"23S rRNA gene","type":"exact"},{"name":"23S_rRNA_gene","type":"exact"}],"termid":"SO:0002243"}


id: FYPO:0000446
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"mitotic G2 phase arrest","type":"related"},{"name":"mitotic G2/M phase transition arrest","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic cell cycle progression at mitotic G2/M phase transition: arrested","type":"related"}],"termid":"FYPO:0000446","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: MONDO:0028569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic interstitial lung disease (obsolete MONDO:0028569)","secondary_identifiers":["Orphanet:264992"],"termid":"MONDO:0028569","xrefs":{"Monarch":{"xref_id":"0028569"}}}


id: MONDO:0011308
data:
  {"annotated_genes":["SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86275],"is_not":false,"summary":null,"term":"MONDO:0011308"}]},"cv_name":"mondo","definition":"GRACILE syndrome is an inherited lethal mitochondrial disorder characterized by fetal growth restriction (GR), aminoaciduria (A), cholestasis (C), iron overload (I), lactacidosis (L), and early death (E).","definition_xrefs":["Orphanet:53693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01405":null},"genotype_count":0,"is_obsolete":false,"name":"GRACILE syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1","ICD9:759.89","SCTID:703388005","UMLS:C1864002","DOID:0111455","MESH:C537934","MEDGEN:400428","OMIM:603358"],"synonyms":[{"name":"FLNMS","type":"related"},{"name":"Fellman disease","type":"exact"},{"name":"Fellman syndrome","type":"related"},{"name":"Finnish lactic acidosis with hepatic hemosiderosis","type":"related"},{"name":"Finnish lethal neonatal metabolic syndrome","type":"related"},{"name":"Growth delay-aminoaciduria-cholestasis-iron overload-lactic acidosis-early death syndrome","type":"exact"},{"name":"Growth restriction-aminoaciduria-cholestasis-iron overload-lactic acidosis-early death syndrome","type":"exact"},{"name":"Growth retardation, amino aciduria, cholestasis, iron overload, lactic acidosis, and early death","type":"related"},{"name":"Growth retardation, aminoaciduria, cholestasis, iron overload, lactic acidosis and early death","type":"related"},{"name":"gracile syndrome","type":"exact"},{"name":"lactic acidosis, Finnish, with hepatic hemosiderosis","type":"related"}],"termid":"MONDO:0011308","terms_by_termid":{"MONDO:0011308":null},"xrefs":{"Monarch":{"xref_id":"0011308"}}}


id: PBO:0052640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 8","termid":"PBO:0052640"}


id: PBO:0043237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel Ka","termid":"PBO:0043237"}


id: GO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leukotriene B4 receptor activity","synonyms":[{"name":"BLT receptor","type":"narrow"}],"termid":"GO:0001632"}


id: GO:0009751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salicylic acid","synonyms":[{"name":"response to salicylate","type":"exact"},{"name":"response to salicylic acid stimulus","type":"exact"}],"termid":"GO:0009751"}


id: MONDO:0018139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete scleredema (obsolete MONDO:0018139)","termid":"MONDO:0018139","xrefs":{"Monarch":{"xref_id":"0018139"}}}


id: PBO:0051959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR interacting domain containing 2","termid":"PBO:0051959"}


id: MONDO:0021524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the buccal mucosa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"buccal mucosa neoplasm","termid":"MONDO:0021241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of buccal mucosa","secondary_identifiers":["NCIT:C4406","MEDGEN:91046","UMLS:C0345566","icd11.foundation:1053814432","ICD9:210.4","SCTID:92039003"],"synonyms":[{"name":"benign buccal mucosa neoplasm","type":"exact"},{"name":"benign buccal mucosa tumor","type":"exact"},{"name":"benign buccal mucosa tumour","type":"exact"},{"name":"benign neoplasm of the buccal mucosa","type":"exact"},{"name":"benign tumor of buccal mucosa","type":"exact"},{"name":"benign tumor of the buccal mucosa","type":"exact"},{"name":"benign tumour of buccal mucosa","type":"exact"},{"name":"benign tumour of the buccal mucosa","type":"exact"},{"name":"buccal mucosa benign neoplasm","type":"exact"}],"termid":"MONDO:0021524","xrefs":{"Monarch":{"xref_id":"0021524"}}}


id: MONDO:0001873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of the facial nerve or nuclei. Pontine disorders may affect the facial nuclei or nerve fascicle. The nerve may be involved intracranially, along its course through the petrous portion of the temporal bone, or along its extracranial course. Clinical manifestations include facial muscle weakness, loss of taste from the anterior tongue, hyperacusis, and decreased lacrimation.","definition_xrefs":["MESH:D005155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"sensory ganglionopathy","termid":"MONDO:0021260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geniculate ganglionitis","secondary_identifiers":["UMLS:C0017407","icd11.foundation:305361524","MEDGEN:4879","DOID:14075","ICD9:351.1","SCTID:72839009","ICD10CM:G51.1"],"synonyms":[{"name":"geniculate ganglion inflammation","type":"exact"},{"name":"geniculate ganglionitis","type":"exact"},{"name":"inflammation of geniculate ganglion","type":"exact"}],"termid":"MONDO:0001873","xrefs":{"Monarch":{"xref_id":"0001873"}}}


id: GO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aging dependent sterility (sensu Fungi) (obsolete GO:0030464)","synonyms":[{"name":"aging dependent sterility (sensu Fungi)","type":"exact"}],"termid":"GO:0030464"}


id: FYPO:0002888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the mitotic cell cycle is arrested after the septum has formed, but before cells have separated, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah","PMID:8978671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mitotic cell cycle arrest before cell separation","synonyms":[{"name":"cell cycle arrest before cell separation during mitotic cell cycle","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation after cytokinesis","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation during vegetative growth","type":"exact"},{"name":"mitotic cell cycle arrest before mitotic cytokinetic cell separation","type":"exact"}],"termid":"FYPO:0002888"}


id: PBO:0045985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHMT2 and SLC44A4 antisense RNA 1","termid":"PBO:0045985"}


id: RO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with_via_parasite-host_interaction","termid":"RO:0002443"},{"relation_name":"is_a","term_name":"has_host","termid":"RO:0002454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasite_of","synonyms":[{"name":"direct parasite of","type":"exact"}],"termid":"RO:0002444"}


id: MONDO:0002718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature or immature teratoma that affects the central nervous system.","definition_xrefs":["NCIT:C5441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"},{"relation_name":"is_a","term_name":"extragonadal teratoma","termid":"MONDO:0019500"},{"relation_name":"is_a","term_name":"central nervous system nongerminomatous germ cell tumor","termid":"MONDO:0020574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system teratoma","secondary_identifiers":["NANDO:2200104","Orphanet:252018","DOID:3640","GARD:20735","MEDGEN:234105","UMLS:C1332895"],"synonyms":[{"name":"CNS teratoma","type":"exact"},{"name":"central nervous system teratoma","type":"exact"},{"name":"teratoma of CNS","type":"exact"},{"name":"teratoma of central nervous system","type":"exact"},{"name":"teratoma of the CNS","type":"exact"},{"name":"teratoma of the central nervous system","type":"exact"}],"termid":"MONDO:0002718","xrefs":{"Monarch":{"xref_id":"0002718"}}}


id: MOD:01672
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-lysine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated lysine","termid":"MOD:01672"}


id: PBO:0051060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-22","termid":"PBO:0051060"}


id: GO:0003196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the ventriculo bulbo valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"ventriculo bulbo valve morphogenesis","termid":"GO:0003187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventriculo bulbo valve formation","termid":"GO:0003196"}


id: PBO:0082690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the heterotetrameric MHF histone-fold complex; in humans the MHF complex interacts with both DNA and Mph1p ortholog FANCM, a Fanconi anemia complementation group protein, to stabilize and remodel blocked replication forks and repair damaged DNA; mhf1 srs2 double mutants are MMS hypersensitive; ortholog of human centromere constitutive-associated network (CCAN) subunit CENP-S, also known as MHF1","termid":"PBO:0082690"}


id: GO:0010774
data:
  {"annotated_genes":["SJAG_02267","SJAG_04950","SJAG_03751"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79232,88804,100874],"is_not":false,"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand invasion","termid":"GO:0000708"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02267":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0007049","GO:0006310","GO:0008150","GO:0006259","GO:0140013"],"is_obsolete":false,"name":"meiotic strand invasion involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010774","terms_by_termid":{"GO:0010774":null}}


id: MONDO:0024812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0024812 (obsolete MONDO:0024812)","termid":"MONDO:0024812","xrefs":{"Monarch":{"xref_id":"0024812"}}}


id: PBO:0062041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 11","termid":"PBO:0062041"}


id: MONDO:0006942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete reflex epilepsy (obsolete MONDO:0006942)","termid":"MONDO:0006942","xrefs":{"Monarch":{"xref_id":"0006942"}}}


id: SO:0000795
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mini_gene that rescues.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"rescue","termid":"SO:0000814"},{"relation_name":"is_a","term_name":"mini_gene","termid":"SO:0000815"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue_mini_gene","synonyms":[{"name":"rescue mini gene","type":"exact"},{"name":"rescue mini-gene","type":"exact"}],"termid":"SO:0000795"}


id: GO:0042932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:8837459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"},{"relation_name":"is_a","term_name":"dipeptide transport","termid":"GO:0042938"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"chrysobactin transport","termid":"GO:0042932"}


id: PBO:0055625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3064","termid":"PBO:0055625"}


id: PBO:0055402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2832","termid":"PBO:0055402"}


id: MONDO:0018040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency with severe reduction in serum IgG and IgA with normal/elevated IgM and normal number of B-cells (obsolete MONDO:0018040)","secondary_identifiers":["Orphanet:331240","icd11.foundation:769068598"],"termid":"MONDO:0018040","xrefs":{"Monarch":{"xref_id":"0018040"}}}


id: PBO:0087207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; novel N-terminal protein methyltransferase that trimethylates the N-terminal glycine residue (G2) and also dimethylates lysine (K3) on elongation factor eEF1A (Tef1p/Tef2p); has a role in rDNA silencing and in lifespan determination","termid":"PBO:0087207"}


id: GO:0030001
data:
  {"annotated_genes":["SJAG_02445","SJAG_00328","SJAG_04167","SJAG_03516","SJAG_04616","SJAG_00547","SJAG_02457","SJAG_01007","SJAG_04830","SJAG_03667","SJAG_02440","SJAG_03401","SJAG_01493","SJAG_04677","SJAG_01541","SJAG_02735","SJAG_03231","SJAG_01119","SJAG_02484","SJAG_03631","SJAG_03497","SJAG_02877","SJAG_04096","SJAG_04757","SJAG_02322","SJAG_04551","SJAG_02532","SJAG_01527","SJAG_01639","SJAG_04260","SJAG_04867","SJAG_01400","SJAG_02473","SJAG_02883","SJAG_01353","SJAG_00211","SJAG_03399","SJAG_02834","SJAG_01803","SJAG_03079","SJAG_01090","SJAG_02578","SJAG_00222","SJAG_04028","SJAG_04668","SJAG_04698","SJAG_01990","SJAG_05229","SJAG_00296","SJAG_04471","SJAG_04185","SJAG_04246","SJAG_04743","SJAG_04111","SJAG_01078","SJAG_04675","SJAG_04737","SJAG_02968","SJAG_03850","SJAG_02019","SJAG_02399","SJAG_03528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59026],"is_not":false,"summary":null,"term":"GO:0030001"},{"annotations":[118534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[64333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070574"},{"annotations":[97672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[74796,114766,92723,67327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[115893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[78685,72677,66123,69942,95145,73906,109694,95777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[108169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[78994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015677"},{"annotations":[114921,88258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[101804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"},{"annotations":[104103,104944,62118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035434"},{"annotations":[105033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006825"},{"annotations":[91523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[104104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[70557,114122,98402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[113543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[61543,76151,78240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[89596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[75818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"},{"annotations":[56930,62586,117302,57454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903830"},{"annotations":[108990,61544,71152,64332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071421"},{"annotations":[77655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045016"},{"annotations":[94544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140141"},{"annotations":[113693,91541],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[80272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[102464],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[112677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097623"},{"annotations":[70921,72620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[67572,57476,61357,80390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071805"},{"annotations":[78002,92773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[108991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"},{"annotations":[62032,62136,69508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[69509,62137,62033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[67223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"},{"annotations":[67571,61322,89638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035725"},{"annotations":[114672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[113544,104492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[94095,94096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[104629,75072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"},{"annotations":[78641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071577"}]},"cv_name":"biological_process","definition":"The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation 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ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0070839","GO:0070838"],"synonyms":[{"name":"divalent metal ion export","type":"narrow"},{"name":"divalent metal ion transport","type":"narrow"},{"name":"heavy metal ion transport","type":"narrow"},{"name":"metal ion 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id: FYPO:0007111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule depolymerization","synonyms":[{"name":"abnormal microtubule catastrophe","type":"related"},{"name":"abnormal microtubule depolymerisation","type":"exact"},{"name":"abnormal microtubule shrinkage","type":"related"}],"termid":"FYPO:0007111"}


id: GO:0050084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + H2O = D-mannitol + 2 H+ + phosphate.","definition_xrefs":["EC:3.1.3.22","RHEA:19537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"mannitol-1-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R02167","MetaCyc:MANNITOL-1-PHOSPHATASE-RXN"],"synonyms":[{"name":"D-mannitol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"mannitol-1-phosphate phosphatase activity","type":"related"}],"termid":"GO:0050084"}


id: GO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid-encoded DNA-directed RNA polymerase complex that resembles eubacterial multisubunit RNA polymerases, with a core composed of alpha, beta, and beta-prime subunits. An additional subunit, a sigma factor, is required for promoter recognition. PEP-A is generated from the PEP-B form during chloroplast maturation to generate a complex composed of at least thirteen polypeptides that is not sensitive to the antibiotic rifampicin, like its precursor form the PEP-B complex.","definition_xrefs":["PMID:10946105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid-encoded plastid RNA polymerase complex","termid":"GO:0000427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"plastid-encoded plastid RNA polymerase complex A","synonyms":[{"name":"PEP-A","type":"exact"}],"termid":"GO:0000343"}


id: FYPO:0001635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-serine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular serine level","synonyms":[{"name":"normal cellular L-serine level","type":"exact"},{"name":"normal cellular serine level during mitotic cell cycle","type":"related"},{"name":"normal cellular serine level during vegetative growth","type":"exact"},{"name":"normal level of serine in cell","type":"exact"}],"termid":"FYPO:0001635"}


id: FYPO:0000100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chloramphenicol. Cells stop growing (and may die) at a concentration of chloramphenicol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to chloramphenicol","synonyms":[{"name":"hypersensitive to chloramphenicol","type":"exact"},{"name":"sensitive to chloramphenicol during mitotic cell cycle","type":"related"},{"name":"sensitive to chloramphenicol during vegetative growth","type":"exact"}],"termid":"FYPO:0000100"}


id: FYPO:0003766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial DNA molecules are interlinked by unresolved recombination junctions.","definition_xrefs":["PomBase:mah","PMID:10954073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"aggregated mtDNA","synonyms":[{"name":"aggregated mitochondrial DNA","type":"exact"},{"name":"aggregated mitochondrial chromosomes","type":"exact"},{"name":"aggregated mtDNA during mitotic cell cycle","type":"related"},{"name":"aggregated mtDNA during vegetative growth","type":"exact"},{"name":"fused mitochondrial chromosomes","type":"related"},{"name":"fused mtDNA","type":"related"},{"name":"interlinked mtDNA","type":"exact"}],"termid":"FYPO:0003766"}


id: GO:0045023
data:
  {"annotated_genes":["SJAG_02621","SJAG_03356","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116312,118424,99885],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle phase transition whose occurrence commits the cell from the G0 quiescent state to the G1 phase. Under certain conditions, cells exit the cell cycle during G1 and remain in the G0 state as nongrowing, non-dividing (quiescent) cells. Appropriate stimulation of such cells induces them to return to G1 and resume growth and division. The G0 to G1 transition is accompanied by many changes in the program of gene expression.","definition_xrefs":["ISBN:0716731363","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045023","terms_by_termid":{"GO:0070317":null}}


id: PBO:0076290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsin III","termid":"PBO:0076290"}


id: PATO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with a round area of different hue or degree of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spotted","termid":"PATO:0000333"}


id: PBO:0078266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-4","termid":"PBO:0078266"}


id: MONDO:0014211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CFAP298 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 26","secondary_identifiers":["DOID:0110627","MEDGEN:816014","UMLS:C3809684","OMIM:615500","GARD:15974"],"synonyms":[{"name":"CFAP298 primary ciliary dyskinesia","type":"exact"},{"name":"CILD26","type":"exact"},{"name":"ciliary dyskinesia, primary, 26","type":"related"},{"name":"ciliary dyskinesia, primary, 26, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 26","type":"exact"},{"name":"primary ciliary dyskinesia 26 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in CFAP298","type":"exact"},{"name":"primary ciliary dyskinesia type 26","type":"exact"}],"termid":"MONDO:0014211","xrefs":{"Monarch":{"xref_id":"0014211"}}}


id: PBO:0042473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB domain containing protein 2","termid":"PBO:0042473"}


id: SO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a plus 1 frameshift.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"plus_1_frameshift","termid":"SO:0000868"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_plus_1_frameshift","synonyms":[{"name":"mRNA with plus 1 frameshift","type":"exact"}],"termid":"SO:0000321"}


id: PBO:0055909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34","termid":"PBO:0055909"}


id: PBO:0088852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar aminopeptidase Lap2","termid":"PBO:0088852"}


id: PBO:0114491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane flippase required for the translocation of Man5GlcNac2-PP-Dol; catalyzes the translocation of the lipid-linked oligosaccharide Man5GlcNac2-PP-Dol across the ER lipid bilayer from the cytoplasmic face to the lumen; mutation is suppressed by expression of human p53 protein; human ortholog RFT1 complements the yeast null mutant","termid":"PBO:0114491"}


id: FYECO:0000162
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02409","name":"stc1delta","uniquename":"SJAG_02409:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03118:allele-2":{"allele_type":"nonsense_mutation","description":"aa61->stop","gene_uniquename":"SJAG_03118","name":"frameshift","uniquename":"SJAG_03118:allele-2"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119799,119653,119655,119654,119656,119642,119644,119810,119880,119865,119914,119866,119913,119863,119643,119867,119864,119802,119645,119646,119647,119648,119640,119633,119634,119635,119636,119637,119638,119639,119649,119650],"is_not":false,"summary":null,"term":"FYECO:0000162"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract and other components. The concentration of glucose is high (eg around 8%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01330":null,"SJAG_01745":null,"SJAG_02392":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02668":null,"SJAG_02763":null,"SJAG_03118":null,"SJAG_03356":null,"SJAG_03449":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04061":null,"SJAG_04574":null},"genotype_count":19,"genotypes_by_uniquename":{"ago1delta":{"display_name":"ago1delta","display_uniquename":"ago1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]}]},"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"arb1delta":{"display_name":"arb1delta","display_uniquename":"arb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02594:allele-1","expression":"Null"}]}]},"arb2delta":{"display_name":"arb2delta","display_uniquename":"arb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04061:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"chp1delta":{"display_name":"chp1delta","display_uniquename":"chp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03916:allele-1","expression":"Null"}]}]},"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta frameshift(aa61->stop)","display_uniquename":"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-2","expression":"Not assayed or wild type"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta mpe1-R77W(aa)","display_uniquename":"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02668:allele-1","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_02668","SJAG_04574","SJAG_03118"],"name":"high glucose YES","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_00426","SJAG_03916","SJAG_02594","SJAG_02409","SJAG_01330","SJAG_03689","SJAG_04574","SJAG_04061","SJAG_02392","SJAG_03356","SJAG_03449","SJAG_02621","SJAG_02763","SJAG_01745"],"single_locus_genotype_uniquenames":["ago1delta","mad2delta","arb2delta","man1delta","chp1delta","pom1delta","stc1delta","rdp1delta","clr4delta","ned1delta","lem2delta","arb1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","dcr1delta"],"synonyms":[{"name":"high glucose rich medium","type":"related"}],"termid":"FYECO:0000162","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: FYPO:0004544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is longer than normal. Heterochromatin maintenance is the process that preserves heterochromatin in a stable functional or structural state.","definition_xrefs":["GO:0070829","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of heterochromatin maintenance","synonyms":[{"name":"increased duration of heterochromatin maintenance during mitotic cell cycle","type":"related"},{"name":"increased duration of heterochromatin maintenance during vegetative growth","type":"exact"},{"name":"prolonged heterochromatin maintenance","type":"exact"}],"termid":"FYPO:0004544"}


id: GO:0070307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a lens fiber cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a lens fiber cell fate. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell development","synonyms":[{"name":"lens fibre cell development","type":"exact"}],"termid":"GO:0070307"}


id: GO:0050357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: atropine + H2O = H+ + tropate + tropine.","definition_xrefs":["EC:3.1.1.10","RHEA:23304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tropinesterase activity","secondary_identifiers":["KEGG_REACTION:R03563","MetaCyc:TROPINESTERASE-RXN"],"synonyms":[{"name":"atropinase activity","type":"related"},{"name":"atropine acylhydrolase activity","type":"related"},{"name":"atropine esterase activity","type":"related"},{"name":"atropinesterase activity","type":"related"},{"name":"tropine esterase activity","type":"related"}],"termid":"GO:0050357"}


id: GO:0044374
data:
  {"annotated_genes":["SJAG_04009","SJAG_05153","SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"},{"annotations":[107381,109138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"}]},"cv_name":"molecular_function","definition":"The activity of binding selectively and non-covalently to DNA in a sequence-specific manner and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["GOC:jl","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding, bending","termid":"GO:0008301"},{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04009":null,"SJAG_04855":null,"SJAG_05153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"sequence-specific DNA binding, bending","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA bending involving sequence-specific DNA binding","type":"exact"}],"termid":"GO:0044374","terms_by_termid":{"GO:0044377":null,"GO:0110035":null}}


id: PBO:0030915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_vegetative_growth","termid":"PBO:0030915"}


id: GO:0031841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide Y receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"neuropeptide Y receptor binding","synonyms":[{"name":"NPY receptor binding","type":"exact"},{"name":"neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031841"}


id: PBO:0044600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 8","termid":"PBO:0044600"}


id: MONDO:1012043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar abiotrophy, non-human animal","termid":"MONDO:1011834"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar abiotrophy, sheep","secondary_identifiers":["OMIA:000175-9940"],"termid":"MONDO:1012043","xrefs":{"Monarch":{"xref_id":"1012043"}}}


id: PATO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disfunctional quality held by the bearer when the latter is unable to perform a regular function(s).","definition_xrefs":["PATC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-functional","secondary_identifiers":["PATO:0001640"],"synonyms":[{"name":"defective","type":"related"},{"name":"disfunctional","type":"exact"},{"name":"failure","type":"related"},{"name":"functional failure","type":"exact"}],"termid":"PATO:0001511"}


id: GO:0009183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine deoxyribonucleoside diphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate biosynthetic process","termid":"GO:0009136"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleoside diphosphate biosynthetic process","synonyms":[{"name":"purine deoxyribonucleoside diphosphate anabolism","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate formation","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009183"}


id: PBO:0075618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide peptidase like 3","termid":"PBO:0075618"}


id: PBO:0053149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 5","termid":"PBO:0053149"}


id: MONDO:0015567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract-glaucoma syndrome is characterized by the association of total bilateral congenital cataract with the secondary occurrence of glaucoma appearing at ages varying between 10 and 40 years.","definition_xrefs":["Orphanet:162"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract-glaucoma syndrome","secondary_identifiers":["MEDGEN:930800","SCTID:718851007","UMLS:C4305131","GARD:1160"],"synonyms":[{"name":"cataract - glaucoma","type":"exact"}],"termid":"MONDO:0015567","xrefs":{"Monarch":{"xref_id":"0015567"}}}


id: MOD:01868
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 140.094963 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.000001 Da","termid":"MOD:01515"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at 140.094963 Da","termid":"MOD:01868"}


id: MONDO:0013879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","secondary_identifiers":["UMLS:C3553622","MEDGEN:766536","OMIM:614743"],"synonyms":[{"name":"PFBMFT2","type":"related"},{"name":"aplastic anaemia","type":"broad"},{"name":"aplastic anemia","type":"broad"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 2","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 2","type":"exact"},{"name":"pulmonary fibrosis, idiopathic, susceptibility to","type":"related"}],"termid":"MONDO:0013879","xrefs":{"Monarch":{"xref_id":"0013879"}}}


id: GO:0015186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-glutamine from one side of a membrane to the other. L-glutamine is 2-amino-4-carbamoylbutanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-glutamine transmembrane transporter activity","synonyms":[{"name":"asparagine/glutamine permease activity","type":"narrow"}],"termid":"GO:0015186"}


id: PBO:0039464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 13A","termid":"PBO:0039464"}


id: GO:1905471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K79 dimethylation.","definition_xrefs":["GOC:TermGenie","PMID:27541139","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K79 dimethylation (obsolete GO:1905471)","synonyms":[{"name":"regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"regulation of histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:1905471"}


id: GO:0090443
data:
  {"annotated_genes":["SJAG_00229","SJAG_06270","SJAG_01790","SJAG_02514","SJAG_03508","SJAG_04455"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70878,74970,95956,101588,107853,110493],"is_not":false,"summary":null,"term":"GO:0090443"}]},"cv_name":"cellular_component","definition":"A conserved protein phosphatase type 2A complex which contains a protein phosphatase type 2A, a protein phosphatase regulatory subunit, a striatin, an FHA domain protein and other subunits (at least six proteins). In fission yeast this complex negatively regulate the septation initiation network at the spindle pole body.","definition_xrefs":["PMID:21561862","GOC:vw","PMID:22119525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"FAR/SIN/STRIPAK complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"FAR complex","type":"related"},{"name":"SIN inhibitory phosphatase (SIP) complex","type":"exact"},{"name":"SIN inhibitory phosphatase complex","type":"exact"},{"name":"SIP complex","type":"exact"},{"name":"STRIPAK signalling complex","type":"related"},{"name":"striatin interacting phosphatase and kinase complex","type":"exact"}],"termid":"GO:0090443","terms_by_termid":{"GO:0090443":null}}


id: GO:0031856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a parathyroid hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"parathyroid hormone receptor binding","synonyms":[{"name":"parathyroid hormone receptor ligand","type":"narrow"}],"termid":"GO:0031856"}


id: PBO:0040335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 1","termid":"PBO:0040335"}


id: MONDO:0006052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection that affects the lungs and is caused by Mycobacterium tuberculosis. Most patients with tuberculosis do not have symptoms (latent tuberculosis) and are not contagious. When signs and symptoms occur (active tuberculosis), patients become contagious. The signs and symptoms include chronic cough with blood-tinged sputum, night sweats, fever, fatigue, and weight loss.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary tuberculosis","secondary_identifiers":["ICD9:011.81","ICD9:011.86","NCIT:C26899","ICD9:011.16","ICD9:011.85","MEDGEN:11947","ICD9:011.96","DOID:2957","ICD9:011.80","ICD9:011.92","EFO:1000049","ICD9:011.84","ICD9:011","SCTID:154283005","ICD9:011.9","ICD9:011.90","UMLS:C0041327","MESH:D014397"],"synonyms":[{"name":"lung TB","type":"exact"},{"name":"lung tuberculosis","type":"exact"},{"name":"pulmonary TB","type":"exact"}],"termid":"MONDO:0006052","xrefs":{"Monarch":{"xref_id":"0006052"}}}


id: MOD:01497
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01497"}


id: PBO:0060278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 11","termid":"PBO:0060278"}


id: PBO:0117016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL3 antisense RNA 4","termid":"PBO:0117016"}


id: PBO:0045170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 4","termid":"PBO:0045170"}


id: PBO:0043868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGRP receptor component","termid":"PBO:0043868"}


id: GO:0010262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Initiation of a somatic embryo-an embryo arising from previously differentiated somatic cells, rather than from fused haploid gametes.","definition_xrefs":["GOC:sm","PMID:9611173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"},{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic embryogenesis","termid":"GO:0010262"}


id: PBO:0071168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 7","termid":"PBO:0071168"}


id: PBO:0039230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT3 intronic transcript 1","termid":"PBO:0039230"}


id: MOD:00455
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a quaternary amine reagent heavy (+6amu) form group.","definition_xrefs":["PubMed:11857757","Unimod:62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+6amu) (N-term & K)","synonyms":[{"name":"GIST-Quat:2H(6)","type":"related"},{"name":"Quaternary amine labeling reagent heavy form (+6amu), N-term & K","type":"related"}],"termid":"MOD:00455"}


id: MONDO:1010471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent truncus arteriosus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus, non-human animal","termid":"MONDO:1010018"},{"relation_name":"is_a","term_name":"conotruncal heart malformations, dog","termid":"MONDO:1010453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus, dog","secondary_identifiers":["OMIA:000795-9615"],"termid":"MONDO:1010471","xrefs":{"Monarch":{"xref_id":"1010471"}}}


id: PBO:0067371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 472, pseudogene","termid":"PBO:0067371"}


id: PBO:0042581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine dioxygenase type 1","termid":"PBO:0042581"}


id: GO:0008309
data:
  {"annotated_genes":["SJAG_02298","SJAG_05373","SJAG_01648","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88872,73570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[97448,108076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a double-stranded DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_01832":null,"SJAG_02298":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140097","GO:0016787","GO:0003824","GO:0016788","GO:0004527","GO:0003674"],"is_obsolete":false,"name":"double-stranded DNA exodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"double-stranded DNA specific exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008309","terms_by_termid":{"GO:0008311":null,"GO:0051908":null}}


id: MONDO:0011521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 1p36.","definition_xrefs":["PMID:19122664","DOID:0110882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 7","secondary_identifiers":["MEDGEN:381452","MESH:C565353","OMIM:605225","UMLS:C1854573"],"synonyms":[{"name":"IBD7","type":"exact"},{"name":"inflammatory bowel disease 7","type":"exact"},{"name":"inflammatory bowel disease type 7","type":"exact"}],"termid":"MONDO:0011521","xrefs":{"Monarch":{"xref_id":"0011521"}}}


id: GO:0070312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nucleotide-excision repair complex formed by the association of the heterodimeric endonuclease XPF/ERCC4-ERCC1 (Rad1p and Rad10p in S. cerevisiae) with the RAD52 protein.","definition_xrefs":["PMID:14734547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"RAD52-ERCC4-ERCC1 complex","termid":"GO:0070312"}


id: GO:0090108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of high-density lipoprotein particle assembly. High-density lipoprotein particle assembly is the aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of high-density lipoprotein particle assembly","termid":"GO:0090107"},{"relation_name":"positively_regulates","term_name":"high-density lipoprotein particle assembly","termid":"GO:0034380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of high-density lipoprotein particle assembly","termid":"GO:0090108"}


id: GO:0009831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that occur during cell growth that result in chemical or structural changes to existing cell walls of the type composed chiefly of cellulose and pectin. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:lr","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cell wall modification involved in multidimensional cell growth","termid":"GO:0042547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"plant-type cell wall modification involved in multidimensional cell growth","synonyms":[{"name":"cell wall modification during cell expansion","type":"broad"},{"name":"cellulose and pectin-containing cell wall modification during multidimensional cell growth","type":"related"}],"termid":"GO:0009831"}


id: PR:O13957
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H4.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H4.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.16c","synonyms":[{"name":"Spom972h-SPAC23H4.16c","type":"exact"}],"termid":"PR:O13957"}


id: GO:0034077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving butanediol; the biologically relevant isomer is 2,3-butanediol, CH3CH(OH)CH(OH)CH3.","definition_xrefs":["ISBN:0911910123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"butanediol metabolic process","synonyms":[{"name":"butanediol metabolism","type":"exact"},{"name":"butylene glycol metabolic process","type":"exact"},{"name":"butylene glycol metabolism","type":"exact"}],"termid":"GO:0034077"}


id: GO:0035304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of removal of phosphate groups from a protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein dephosphorylation (obsolete GO:0035304)","synonyms":[{"name":"regulation of protein amino acid dephosphorylation","type":"exact"}],"termid":"GO:0035304"}


id: PBO:0052229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 6","termid":"PBO:0052229"}


id: FYPO:0000095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bleomycin. Cells stop growing (and may die) at a concentration of bleomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to bleomycin","synonyms":[{"name":"hypersensitive to bleomycin","type":"exact"},{"name":"sensitive to bleomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to bleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0000095"}


id: PBO:0058784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7153","termid":"PBO:0058784"}


id: GO:0180039
data:
  {"annotated_genes":["SJAG_01978","SJAG_02486","SJAG_00845","SJAG_02233","SJAG_03453","SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[104021,88463,114956,91173,115917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a pheromone response MAPK cascade.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"pheromone response MAPK cascade","termid":"GO:0071507"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00781":null,"SJAG_00845":null,"SJAG_01978":null,"SJAG_02233":null,"SJAG_02486":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of pheromone response MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180039","terms_by_termid":{"GO:0062038":null,"GO:0180040":null}}


id: PBO:0012222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mre11 nuclease","termid":"PBO:0012222"}


id: MONDO:0005085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A wedge-shaped fibrovascular lesion arising from the bulbar conjunctiva and extending to the cornea. It is caused by chronic exposure to solar ultraviolet radiation, heat, and dust. It may cause severe vision loss. Studies have linked pterygium to neoplastic proliferation and suggest that it may be a stem cell disorder.","definition_xrefs":["NCIT:C133744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign conjunctival neoplasm","termid":"MONDO:0006105"},{"relation_name":"is_a","term_name":"benign neoplasm of cornea","termid":"MONDO:0021452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pterygium","secondary_identifiers":["DOID:0002116","MESH:D011625","MEDGEN:46202","icd11.foundation:1207385905","ICD9:372.4","EFO:0000678","ICD10CM:H11.0","SCTID:77489003","UMLS:C0033999","ICD9:372.40"],"synonyms":[{"name":"pterygium of conjunctiva and cornea","type":"exact"},{"name":"surfer's eye","type":"exact"}],"termid":"MONDO:0005085","xrefs":{"Monarch":{"xref_id":"0005085"}}}


id: GO:0102697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + O-beta-D-glucosyl-trans-zeatin = H+ + trans-zeatin-O-glucoside-7-N-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-zeatin-O-glucoside UDP glycosyltransferase activity (obsolete GO:0102697)","termid":"GO:0102697"}


id: MONDO:0001469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cascade stomach","secondary_identifiers":["MEDGEN:540460","UMLS:C0267183","ICD9:537.6","DOID:12234","SCTID:54051005"],"synonyms":[{"name":"hourglass stricture or stenosis of stomach","type":"exact"}],"termid":"MONDO:0001469","xrefs":{"Monarch":{"xref_id":"0001469"}}}


id: FYPO:0001596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which amino acid import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal amino acid import","synonyms":[{"name":"normal amino acid import across plasma membrane","type":"exact"},{"name":"normal amino acid import during mitotic cell cycle","type":"related"},{"name":"normal amino acid import during vegetative growth","type":"exact"},{"name":"normal amino acid import into cell","type":"exact"},{"name":"normal amino acid uptake","type":"exact"}],"termid":"FYPO:0001596"}


id: PBO:0046322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1 pseudogene 3","termid":"PBO:0046322"}


id: PBO:0070654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 25","termid":"PBO:0070654"}


id: PBO:0041618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 4","termid":"PBO:0041618"}


id: PBO:0017538
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor syndrome","termid":"PBO:0017538"}


id: PBO:0049838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 1","termid":"PBO:0049838"}


id: MONDO:0020375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coralliform cataract (obsolete MONDO:0020375)","secondary_identifiers":["Orphanet:98990"],"termid":"MONDO:0020375","xrefs":{"Monarch":{"xref_id":"0020375"}}}


id: PBO:0042338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD70 molecule","termid":"PBO:0042338"}


id: GO:0098764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A meiotic cell cycle phase prior to a during which some part of meiosis I nuclear division or the proceeding cytokinesis occurs.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiosis I cell cycle phase","termid":"GO:0098764"}


id: MONDO:0005996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by the nematode Trichuris trichiura, a soil-transmitted helminth, which is transmitted via food and/or water contaminated with the eggs of the worm. Symptoms are usually mild and include abdominal pain, diarrhea, fatigue, and possibly anemia secondary to blood loss in diarrhea.","definition_xrefs":["NCIT:C128399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Enoplea infectious disease","termid":"MONDO:0005745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichuriasis","secondary_identifiers":["DOID:1252","MEDGEN:1790401","UMLS:C5551334","ICD10CM:B79","icd11.foundation:422746556","ICD9:127.3","MESH:D014257","SCTID:3752003","EFO:0007524"],"synonyms":[{"name":"Trichuris trichiura caused disease or disorder","type":"exact"},{"name":"Trichuris trichiura disease or disorder","type":"exact"},{"name":"Trichuris trichiura infection","type":"exact"},{"name":"Trichuris trichiura infectious disease","type":"exact"},{"name":"infection by Trichuris trichura","type":"exact"},{"name":"trichocephaliasis","type":"related"},{"name":"trichuriasis infection","type":"exact"},{"name":"whipworm disease","type":"exact"},{"name":"whipworm infection","type":"related"}],"termid":"MONDO:0005996","xrefs":{"Monarch":{"xref_id":"0005996"}}}


id: PBO:0111875
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDR subfamily","termid":"PBO:0111875"}


id: PBO:0056837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B","termid":"PBO:0056837"}


id: PBO:0060534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 10","termid":"PBO:0060534"}


id: GO:0071181
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch3 (ICN3), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN3 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch3 complex","type":"exact"}],"termid":"GO:0071181"}


id: PBO:0091551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane xenobiotic transmembrane transporter Mfs1","termid":"PBO:0091551"}


id: PR:O14021
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prw1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RbAp48-related WD40 repeat-containing protein prw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.18","synonyms":[{"name":"Spom972h-prw1","type":"exact"}],"termid":"PR:O14021"}


id: PBO:0077391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 131","termid":"PBO:0077391"}


id: PBO:0068808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 45, pseudogene","termid":"PBO:0068808"}


id: PBO:0079332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 18","termid":"PBO:0079332"}


id: MONDO:0005282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder that manifests as different lupus-specific skin disorders; it can occur with systemic lupus erythematosus, or as a singular disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lupus erythematosus","termid":"MONDO:0004670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cutaneous lupus erythematosus","secondary_identifiers":["DOID:0050169","NCIT:C26819","SCTID:7119001","GARD:6225","MEDGEN:7401","MESH:D008178","UMLS:C0024137","EFO:0003834","icd11.foundation:1401395930"],"synonyms":[{"name":"lupus erythematosus, cutaneous","type":"related"}],"termid":"MONDO:0005282","xrefs":{"Monarch":{"xref_id":"0005282"}}}


id: RO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and a barrier, where the process occurs in a region spanning the barrier. For cellular processes the barrier is typically a membrane. Examples include transport across a membrane and membrane depolarization.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_across","termid":"RO:0002021"}


id: MONDO:0005934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pyruvate decarboxylase deficiency (obsolete MONDO:0005934)","termid":"MONDO:0005934","xrefs":{"Monarch":{"xref_id":"0005934"}}}


id: PBO:0080061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP30 antisense RNA 1","termid":"PBO:0080061"}


id: MONDO:0013449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the CRX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 7","secondary_identifiers":["OMIM:613829","ICD10CM:H35.5","UMLS:C3151192","MEDGEN:462542","GARD:10880","DOID:0110333"],"synonyms":[{"name":"CRX Leber congenital amaurosis","type":"exact"},{"name":"LCA7","type":"exact"},{"name":"Leber congenital amaurosis 7","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in CRX","type":"exact"},{"name":"Leber congenital amaurosis type 7","type":"exact"}],"termid":"MONDO:0013449","xrefs":{"Monarch":{"xref_id":"0013449"}}}


id: GO:0034772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of two methyl groups to lysine at position 20 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 dimethylation (obsolete GO:0034772)","synonyms":[{"name":"histone H4 K20 dimethylation","type":"exact"},{"name":"histone lysine H4 K20 dimethylation","type":"exact"}],"termid":"GO:0034772"}


id: GO:0070650
data:
  {"annotated_genes":["SJAG_00938","SJAG_04498","SJAG_03011","SJAG_04621","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061573"},{"annotations":[108453,98351,89649,98609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"}]},"cv_name":"biological_process","definition":"Any cellular process that establishes the spatial arrangement of actin filament bundles within the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle organization","termid":"GO:0061572"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_03011":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"actin filament bundle distribution","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070650","terms_by_termid":{"GO:0061573":null,"GO:0071520":null}}


id: GO:0035936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of testosterone into the circulatory system. Testosterone is an androgen having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4-C-5.","definition_xrefs":["GOC:sl","PMID:12606499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"testosterone secretion","termid":"GO:0035936"}


id: PBO:0078935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 3-1","termid":"PBO:0078935"}


id: GO:0050042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + oxaloacetate = malate + pyruvate.","definition_xrefs":["RHEA:10984","EC:1.1.99.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactate-malate transhydrogenase activity","secondary_identifiers":["MetaCyc:LACTATE-MALATE-TRANSHYDROGENASE-RXN","KEGG_REACTION:R01447"],"synonyms":[{"name":"(S)-lactate:oxaloacetate oxidoreductase activity","type":"related"},{"name":"malate-lactate transhydrogenase activity","type":"related"}],"termid":"GO:0050042"}


id: PBO:0073927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 14 pseudogene 1","termid":"PBO:0073927"}


id: MONDO:0016827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy-growth delay-intellectual disability-hypospadias syndrome","secondary_identifiers":["Orphanet:2601"],"termid":"MONDO:0016827","xrefs":{"Monarch":{"xref_id":"0016827"}}}


id: GO:0099403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome along the length of the telomeric region is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["GOC:BHF_telomere","GOC:dos","PMID:26373281","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of mitotic sister chromatid cohesion","termid":"GO:0034088"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion, telomeric","termid":"GO:0099404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:0099403"}


id: MONDO:0009001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macular coloboma-cleft palate-hallux valgus syndrome is characterized by the association of bilateral macular coloboma, cleft palate, and hallux valgus. It has been described in a brother and sister. Pelvic, limb and digital anomalies were also reported. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:91494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular coloboma-cleft palate-hallux valgus syndrome","secondary_identifiers":["OMIM:216800","SCTID:722463001","UMLS:C1857619","MEDGEN:341812","GARD:16802","MESH:C565686"],"synonyms":[{"name":"coloboma of macula and skeletal anomalies","type":"related"}],"termid":"MONDO:0009001","xrefs":{"Monarch":{"xref_id":"0009001"}}}


id: MOD:00158
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tryptophan residues by a carbon-carbon bond to form 4'-(L-tryptophan)-L-tryptophyl quinone.","definition_xrefs":["ChEBI:20251","DeltaMass:0","PubMed:2028257","RESID:AA0149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4'-(L-tryptophan)-L-tryptophyl quinone","synonyms":[{"name":"2,4-BisTrp-6,7-dione (from Tryptophan)","type":"exact"},{"name":"2-amino-3-[2-[2-amino-3-(2-carboxyethyl)-6,7-dioxo-1H-indol-4-yl]-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"3-[(2S)-2-amino-2-carboxyethyl]-4-(3-[(2S)-2-amino-2-carboxyethyl]-1H-indol-2-yl)-6,7-indolinedione","type":"exact"},{"name":"4'-tryptophan-tryptophylquinone","type":"exact"},{"name":"4-(2'-tryptophyl)tryptophan-6,7-dione","type":"exact"},{"name":"4-(L-tryptophan-2-yl)-L-tryptophyl quinone","type":"exact"},{"name":"CROSSLNK Tryptophan tryptophylquinone (Trp-Trp)","type":"exact"},{"name":"TTQ","type":"exact"},{"name":"XLNK-4'Trp-TrpQ","type":"exact"},{"name":"alpha,alpha'-diamino-6',7'-dihydro-6',7'-dioxo-(2,4'-bi-1H-indole)-3,3'-dipropanoic acid","type":"exact"}],"termid":"MOD:00158"}


id: GO:0102928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-solanine + UDP-L-rhamnose = solanine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-solanine rhamnosyltransferase activity (obsolete GO:0102928)","termid":"GO:0102928"}


id: PBO:0108709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific RabGEF Spo13","termid":"PBO:0108709"}


id: PBO:0024862
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minor AP lyase activity detected but is not likely to be biologically relevant","termid":"PBO:0024862"}


id: GO:0032131
data:
  {"annotated_genes":["SJAG_01971","SJAG_04778"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101897],"is_not":false,"summary":null,"term":"GO:0032131"},{"annotations":[88497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032132"}]},"cv_name":"molecular_function","definition":"Binding to an alkylated residue in DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_04778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"alkylated DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032131","terms_by_termid":{"GO:0032131":null,"GO:0032132":null}}


id: PBO:0017637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein Mpd1 (predicted)","termid":"PBO:0017637"}


id: PR:O94598
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec5 gene.","definition_xrefs":["UniProtKB:O94598","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.10c","synonyms":[{"name":"Spom972h-sec5","type":"exact"}],"termid":"PR:O94598"}


id: PBO:0078598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 11, Y-linked","termid":"PBO:0078598"}


id: PBO:0031116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mutator","termid":"PBO:0031116"}


id: MONDO:0016257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenosarcoma of the corpus uteri (obsolete MONDO:0016257)","termid":"MONDO:0016257","xrefs":{"Monarch":{"xref_id":"0016257"}}}


id: PBO:0061403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPR2 like, GATOR1 complex subunit","termid":"PBO:0061403"}


id: PBO:0044316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-245 beta chain","termid":"PBO:0044316"}


id: PBO:0056467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase family member 4","termid":"PBO:0056467"}


id: PBO:0054010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1340","termid":"PBO:0054010"}


id: PBO:0079259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 31","termid":"PBO:0079259"}


id: GO:0033789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1,4-benzoquinone + H2O + phenylacetyl-CoA = 2 hydroquinone + phenylglyoxylyl-CoA.","definition_xrefs":["RHEA:15705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phenylacetyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:1.17.5.1-RXN","EC:1.17.5.1","KEGG_REACTION:R07222"],"synonyms":[{"name":"phenylacetyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"phenylacetyl-CoA:quinone oxidoreductase activity","type":"related"}],"termid":"GO:0033789"}


id: GO:0098745
data:
  {"annotated_genes":["SJAG_01746","SJAG_05694","SJAG_05010"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91649,91874,110209],"is_not":false,"summary":null,"term":"GO:0098745"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of a Dcp1 regulatory subunit and a Dcp2 catalytic subunit that has mRNA cap binding activity and is involved in decapping of nuclear-transcribed mRNA.","definition_xrefs":["GOC:dos","GOC:vw","PMID:22323607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01746":null,"SJAG_05010":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA decapping complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dcp1-Dcp2 complex","type":"exact"}],"termid":"GO:0098745","terms_by_termid":{"GO:0098745":null}}


id: GO:0009161
data:
  {"annotated_genes":["SJAG_00197","SJAG_04709","SJAG_00044","SJAG_04970","SJAG_03164","SJAG_00533","SJAG_02364","SJAG_04882","SJAG_01298","SJAG_04849","SJAG_04845","SJAG_04354","SJAG_01814","SJAG_04713","SJAG_03811","SJAG_01661","SJAG_02850","SJAG_04681","SJAG_02038","SJAG_03355","SJAG_01070","SJAG_01859","SJAG_06634","SJAG_01937","SJAG_00964","SJAG_00444","SJAG_03140","SJAG_00694","SJAG_01081","SJAG_04634","SJAG_04123","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77128,79156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[72074,64554,57099,60143,65561,57998,70276,77100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[61234,61990,59164,59498,57233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[59478,76753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046033"},{"annotations":[57088,74276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[68203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[73027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[114442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046444"},{"annotations":[63132,75060,59497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[64491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046037"},{"annotations":[75974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[79157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046040"},{"annotations":[75975,65066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[60089,61863,63619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009156"},{"annotations":[68204,87779,88771,92293,93296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[75976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ribonucleoside monophosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_01937":null,"SJAG_02038":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03355":null,"SJAG_03708":null,"SJAG_03811":null,"SJAG_04123":null,"SJAG_04354":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04845":null,"SJAG_04849":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009161","terms_by_termid":{"GO:0006177":null,"GO:0006189":null,"GO:0009156":null,"GO:0009224":null,"GO:0009398":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0046033":null,"GO:0046037":null,"GO:0046040":null,"GO:0046444":null}}


id: PBO:0080094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uronyl 2-sulfotransferase","termid":"PBO:0080094"}


id: PBO:0039381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amphiphysin","termid":"PBO:0039381"}


id: MONDO:1010321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal detachment, non-human animal","secondary_identifiers":["OMIA:000275"],"termid":"MONDO:1010321","xrefs":{"Monarch":{"xref_id":"1010321"}}}


id: PBO:0030129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_magnesium_level","termid":"PBO:0030129"}


id: PBO:0042835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20DC antisense RNA 1","termid":"PBO:0042835"}


id: PBO:0064555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)","termid":"PBO:0064555"}


id: PR:P79011
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor IIE subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04370","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIE subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.08c","secondary_identifiers":["UniProtKB:P79011"],"synonyms":[{"name":"Spom972h-GTF2E2","type":"exact"},{"name":"TFIIE-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79011"}


id: MONDO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the foramen magnum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foramen magnum meningioma","secondary_identifiers":["MEDGEN:232512","UMLS:C1333630","DOID:4708","NCIT:C5280"],"synonyms":[{"name":"foramen magnum meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of foramen magnum","type":"exact"},{"name":"meningioma of Foramen magnum","type":"exact"},{"name":"meningioma of the Foramen magnum","type":"exact"}],"termid":"MONDO:0003109","xrefs":{"Monarch":{"xref_id":"0003109"}}}


id: GO:0075199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont haustorium neck formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"modulation of symbiont haustorium neck formation for entry into host","termid":"GO:0075198"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"positively_regulates","term_name":"haustorium neck formation","termid":"GO:0075197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of symbiont haustorium neck formation for entry into host","termid":"GO:0075199"}


id: GO:0046436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-alanine, the D-enantiomer of the amino acid alanine, i.e. (2R)-2-aminopropanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"D-alanine metabolic process","synonyms":[{"name":"D-alanine metabolism","type":"exact"}],"termid":"GO:0046436"}


id: MONDO:0017086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary tethered cord syndrome is a genetic, non-syndromic congenital malformation of the neurenteric canal, spinal cord and column characterized by progressive neurologic deterioration (pain, sensorimotor deficits, abnormal gait, decreased tone or abnormal reflexes), musculoskeletal changes (foot deformities and asymmetry, muscle atrophy, limb weakness and numbness, gait disturbances, scoliosis) and/or genitourinary manifestations (bladder and bowel dysfunction). Midline cutaneous stigmata in the lumbosacral region, such as turfs of hair, skin appendages, dimples, subcutaneous lipomas, skin discoloration or hemangiomas, are frequently associated.","definition_xrefs":["Orphanet:268861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"primary tethered cord syndrome","secondary_identifiers":["NORD:1762","SCTID:70534000","icd11.foundation:66705662","MEDGEN:1636724","UMLS:C4708602","GARD:4018"],"synonyms":[{"name":"Tethered Cord Syndrome","type":"exact"},{"name":"occult spinal dysraphism","type":"related"},{"name":"occult spinal dysraphism sequence","type":"related"},{"name":"primary tethered spinal cord syndrome","type":"exact"},{"name":"segmental vertebral anomalies","type":"related"},{"name":"tethered cord syndrome","type":"related"}],"termid":"MONDO:0017086","xrefs":{"Monarch":{"xref_id":"0017086"}}}


id: PBO:0091053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm7","termid":"PBO:0091053"}


id: PBO:0091436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-dependent oxidoreductase, implicated in cellular detoxification","termid":"PBO:0091436"}


id: GO:0014716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Skeletal muscle satellite cell asymmetric division that occurs during a process in which damaged muscle tissue is being rebuilt.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle satellite stem cell asymmetric division","termid":"GO:0014833"},{"relation_name":"part_of","term_name":"skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration","termid":"GO:0014834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite stem cell asymmetric division involved in skeletal muscle regeneration","synonyms":[{"name":"satellite cell asymmetric division involved in skeletal muscle regeneration","type":"exact"}],"termid":"GO:0014716"}


id: PBO:0039345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aly/REF export factor","termid":"PBO:0039345"}


id: GO:0007344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The merging of two pronuclei in a fertilized egg to fuse and produce a single zygotic genome.","definition_xrefs":["ISBN:087969307X","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronuclear fusion","termid":"GO:0007344"}


id: MONDO:0016760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-microcornea syndrome, Seemanova type is characterized by microcephaly and brachycephaly, eye anomalies (microphthalmia, microcornea, congenital cataract), hypogenitalism, severe intellectual deficit, growth retardation and progressive spasticity. It has been described in two patients (a male and his sister's son). Both patients also presented with facial dysmorphism, including upslanting palpebral fissures, epicanthal folds, highly arched palate, microstomia, and retrognathia. This syndrome is transmitted as an X-linked trait.","definition_xrefs":["Orphanet:2528"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-microcornea syndrome, Seemanova type","secondary_identifiers":["icd11.foundation:1197077842","UMLS:C2931524","MESH:C537539","GARD:3627","MEDGEN:419433","SCTID:715464002"],"synonyms":[{"name":"Seemanova Lesny syndrome","type":"related"},{"name":"Seemanova-Lesny syndrome","type":"exact"},{"name":"X-linked microcephaly, microphthalmia, microcornea, congenital cataract, hypogenitalism, mental deficiency, growth retardation","type":"related"},{"name":"microcephaly microcornea syndrome Seemanova type","type":"related"}],"termid":"MONDO:0016760","xrefs":{"Monarch":{"xref_id":"0016760"}}}


id: SO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that has been produced as the product of a reverse transcriptase mediated event.","direct_ancestors":[{"relation_name":"has_quality","term_name":"retrotransposed","termid":"SO:0000569"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrogene","termid":"SO:0001219"}


id: GO:0072444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic DNA replication checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to DNA replication checkpoint signaling","termid":"GO:0072438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic DNA replication checkpoint signaling","secondary_identifiers":["GO:0072447"],"synonyms":[{"name":"S-M checkpoint effector process","type":"exact"},{"name":"mitotic DNA replication checkpoint effector process","type":"exact"},{"name":"response to S-M checkpoint signaling","type":"exact"},{"name":"response to signal involved in S-M checkpoint","type":"exact"},{"name":"response to signal involved in mitotic DNA replication checkpoint","type":"exact"}],"termid":"GO:0072444"}


id: GO:1902365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to spindle pole body","synonyms":[{"name":"activation of protein localisation to spindle pole body","type":"narrow"},{"name":"activation of protein localization to spindle pole body","type":"narrow"},{"name":"positive regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up regulation of protein localization to spindle pole body","type":"exact"},{"name":"up-regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up-regulation of protein localization to spindle pole body","type":"exact"},{"name":"upregulation of protein localisation to spindle pole body","type":"exact"},{"name":"upregulation of protein localization to spindle pole body","type":"exact"}],"termid":"GO:1902365"}


id: MONDO:0100495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare myopathy characterized by weakness of the muscles of the anterior compartment of lower limbs. Described as a more severe tibial muscular dystrophy phenotype, distal titinopathy is associated with earlier onset and progression to include soleus muscle and proximal muscles.","definition_xrefs":["PMID:24395473","PMID:27796757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive titinopathy","termid":"MONDO:0100493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"autosomal recessive distal titinopathy","synonyms":[{"name":"distal titinopathy","type":"broad"}],"termid":"MONDO:0100495","xrefs":{"Monarch":{"xref_id":"0100495"}}}


id: PBO:0088196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcription factor involved in arginine-responsive genes; Zn(2)-Cys(6) binuclear cluster domain type; involved in the regulation of arginine-responsive genes; acts with Arg80p and Arg82p","termid":"PBO:0088196"}


id: PBO:0110391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTMR9 pseudogene 1","termid":"PBO:0110391"}


id: PBO:0075628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein pseudogene 1","termid":"PBO:0075628"}


id: PBO:0005042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-Q homolog Fta7","termid":"PBO:0005042"}


id: MONDO:1012927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in crab-eating macaque due to a mutation in the APP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, APP-related, crab-eating macaque","secondary_identifiers":["OMIA:002538-9541"],"termid":"MONDO:1012927","xrefs":{"Monarch":{"xref_id":"1012927"}}}


id: GO:0010478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A respiratory electron flow (from NAD(P)H to plastoquinone (PQ) and O2) involving both a nonphotochemical reduction and re-oxidation of PQ pool.","definition_xrefs":["GOC:tb","PMID:17573537","GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"chlororespiration","termid":"GO:0010478"}


id: GO:1902230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:15314165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902229"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"down regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902230"}


id: PR:O74480
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1840.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.07c","synonyms":[{"name":"Spom972h-SPCC1840.07c","type":"exact"}],"termid":"PR:O74480"}


id: FYPO:0005941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break clipping is normal (i.e. indistinguishable from wild type). Meiotic DNA double-strand break clipping is the process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis.","definition_xrefs":["GO:1990898","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic DNA double-strand break clipping","termid":"FYPO:0005941"}


id: FYPO:0001327
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119857,119858,119859],"is_not":false,"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during vegetative growth","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000762"],"single_locus_annotated_genes":["SJAG_01956","SJAG_03351","SJAG_03575"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein accumulation during vegetative growth","type":"related"},{"name":"increased protein level during mitotic cell cycle","type":"related"},{"name":"protein accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0001327","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: PBO:0072558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding C","termid":"PBO:0072558"}


id: GO:1990076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell wall polysaccharide catabolic process that is involved in abscission.","definition_xrefs":["PMID:23479623","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"},{"relation_name":"part_of","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell wall polysaccharide catabolic process involved in abscission","termid":"GO:1990076"}


id: FYPO:0007719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which SMN complex assembly is abolished.","definition_xrefs":["PomBase:mah","PMID:33754639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal SMN complex assembly","termid":"FYPO:0007718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished SMN complex assembly","synonyms":[{"name":"SMN complex assembly abolished","type":"exact"},{"name":"abolished SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"abolished SMN complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007719"}


id: PR:G2TRR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gem7 gene.","definition_xrefs":["UniProtKB:G2TRR1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem-associated protein 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.16","synonyms":[{"name":"Spom972h-gem7","type":"exact"}],"termid":"PR:G2TRR1"}


id: MONDO:0010908
data:
  {"annotated_genes":["SJAG_03126","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85839,85840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"Loose anagen syndrome is a rare benign hair disorder affecting predominantly blond females in childhood and characterized by the presence of hair that can be easily and painlessly pulled out. Most of the hair is in the anagen phase and lacks an external epithelial sheath. Hair grows back quickly and the condition improves spontaneously with aging. Loose anagen hair can be associated with other anomalies, such as coloboma.","definition_xrefs":["Orphanet:168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_03126":null},"genotype_count":0,"is_obsolete":false,"name":"loose anagen syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111702","OMIM:600628","ICD9:704.8","MESH:D058247","MEDGEN:98351","UMLS:C0406468","GARD:3287","icd11.foundation:547259783","SCTID:238735005"],"synonyms":[{"name":"loose anagen hair syndrome","type":"related"}],"termid":"MONDO:0010908","terms_by_termid":{"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0010908"}}}


id: PATO:0001433
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process which describes the growth of an organism, structure, or group of organisms.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth quality of occurrent","secondary_identifiers":["PATO:0001489"],"synonyms":[{"name":"growth quality of a process","type":"related"},{"name":"growth timing quality","type":"related"}],"termid":"PATO:0001433"}


id: PBO:0040862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 1","termid":"PBO:0040862"}


id: MONDO:1012022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spontaneous autoimmune thyroiditis, non-human animal","termid":"MONDO:1011673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spontaneous autoimmune thyroiditis, domestic cat","secondary_identifiers":["OMIA:000097-9685"],"termid":"MONDO:1012022","xrefs":{"Monarch":{"xref_id":"1012022"}}}


id: GO:1990477
data:
  {"annotated_genes":["SJAG_03939","SJAG_00701","SJAG_04768","SJAG_02382","SJAG_00456"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87803,91113,109579,112182,113083],"is_not":false,"summary":null,"term":"GO:1990477"}]},"cv_name":"cellular_component","definition":"Protein complex formed by an RNA binding protein Red1, an RNA helicase Mtl1, Red5, Rmn1, Iss10/Pir1, and Ars2/Pir2. This complex is required for the recruitment of the nuclear exosome to Mmi1 nuclear focus. It is likely related to the human CBCN complex. This complex is also known as RNA silencing (NURS) complex.","definition_xrefs":["PMID:24210919","PMID:24713849","PMID:32012158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_00701":null,"SJAG_02382":null,"SJAG_03939":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MTREC complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990345"],"synonyms":[{"name":"Mtl1-Red1 core complex","type":"exact"},{"name":"NURS complex","type":"exact"},{"name":"PAXT complex","type":"exact"}],"termid":"GO:1990477","terms_by_termid":{"GO:1990477":null}}


id: PBO:0031012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_vegetative_growth","termid":"PBO:0031012"}


id: PR:Q9USQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USQ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.14c","synonyms":[{"name":"ODC-Az (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spa1","type":"exact"}],"termid":"PR:Q9USQ5"}


id: MONDO:0026767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 74, COVID-19-related, X-linked","secondary_identifiers":["UMLS:C5435745","MEDGEN:1768360","DOID:0112063","OMIM:301051"],"synonyms":[{"name":"IMD74","type":"related"},{"name":"IMMUNODEFICIENCY 74, COVID19-RELATED, X-LINKED","type":"related"},{"name":"TLR7 deficiency","type":"related"},{"name":"immunodeficiency 74, COVID19-related, X-linked, X-linked recessive","type":"exact"},{"name":"respiratory insufficiency due to SARS-CoV-2 viral infection","type":"related"}],"termid":"MONDO:0026767","xrefs":{"Monarch":{"xref_id":"0026767"}}}


id: MONDO:0100301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing capillary infantile hemangioma.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma, capillary infantile, susceptibility to","secondary_identifiers":["MEDGEN:864857","UMLS:C4016420"],"termid":"MONDO:0100301","xrefs":{"Monarch":{"xref_id":"0100301"}}}


id: PBO:0001258
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Prr1","termid":"PBO:0001258"}


id: PBO:0062076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 7 pseudogene","termid":"PBO:0062076"}


id: GO:1904120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of otic vesicle morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:25677106","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"regulation of otic vesicle morphogenesis","termid":"GO:1904118"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of otic vesicle morphogenesis","synonyms":[{"name":"activation of otic vesicle morphogenesis","type":"narrow"},{"name":"up regulation of otic vesicle morphogenesis","type":"exact"},{"name":"up-regulation of otic vesicle morphogenesis","type":"exact"},{"name":"upregulation of otic vesicle morphogenesis","type":"exact"}],"termid":"GO:1904120"}


id: PBO:0018233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 assembly protein","termid":"PBO:0018233"}


id: GO:0009685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"gibberellin metabolic process","synonyms":[{"name":"gibberellic acid metabolic process","type":"narrow"},{"name":"gibberellic acid metabolism","type":"narrow"},{"name":"gibberellin metabolism","type":"exact"}],"termid":"GO:0009685"}


id: PBO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Slt1","termid":"PBO:0002138"}


id: MONDO:0005006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pediatric sarcoma affecting the kidney. It is characterized by the presence of epithelioid or spindle cells forming cords or nests, separated by fibrovascular septa. It is associated with internal tandem duplications in the BCOR gene. It metastasizes to lung, bone, brain and soft tissue.","definition_xrefs":["NCIT:C4264"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited renal tumor (obsolete MONDO:0015963)","termid":"MONDO:0015963"},{"relation_name":"is_a","term_name":"clear cell sarcoma","termid":"MONDO:0002926"},{"relation_name":"is_a","term_name":"kidney sarcoma","termid":"MONDO:0002930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"clear cell sarcoma of kidney","secondary_identifiers":["GARD:21905","EFO:0000350","ICDO:8964/3","NANDO:2200044","Orphanet:457246","UMLS:C0334488","DOID:4880","MEDGEN:90791","ONCOTREE:CCSK"],"synonyms":[{"name":"CCSK","type":"exact"},{"name":"childhood clear cell sarcoma of the kidney","type":"exact"},{"name":"childhood kidney clear cell sarcoma","type":"exact"},{"name":"childhood renal clear cell sarcoma","type":"exact"},{"name":"clear cell sarcoma - kidney","type":"exact"},{"name":"clear cell sarcoma of kidney","type":"exact"},{"name":"clear cell sarcoma of the kidney","type":"exact"},{"name":"kidney clear cell sarcoma","type":"exact"},{"name":"paediatric kidney clear cell sarcoma","type":"exact"},{"name":"paediatric renal clear cell sarcoma","type":"exact"},{"name":"pediatric kidney clear cell sarcoma","type":"exact"},{"name":"pediatric renal clear cell sarcoma","type":"exact"},{"name":"renal clear cell sarcoma","type":"exact"}],"termid":"MONDO:0005006","xrefs":{"Monarch":{"xref_id":"0005006"}}}


id: PBO:0067843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 145","termid":"PBO:0067843"}


id: GO:0003851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acylsphing-4-enine + UDP-alpha-D-galactose = a beta-D-galactosyl-(1<->1')-N-acylsphing-4-enine + H+ + UDP.","definition_xrefs":["EC:2.4.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"N-acylsphingosine galactosyltransferase activity","secondary_identifiers":["RHEA:13093","MetaCyc:2.4.1.47-RXN","Reactome:R-HSA-6785933"],"synonyms":[{"name":"2-hydroxyacylsphingosine 1-beta-galactosyltransferase activity","type":"exact"}],"termid":"GO:0003851"}


id: PBO:0034118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-helper_property","termid":"PBO:0034118"}


id: PBO:0048602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone secretagogue receptor","termid":"PBO:0048602"}


id: MONDO:0036781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the structures of the axilla.","definition_xrefs":["NCIT:C35750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"axillary neoplasm","termid":"MONDO:0036779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign axillary neoplasm","secondary_identifiers":["UMLS:C0684828","MEDGEN:146338"],"synonyms":[{"name":"axillary neoplasm, benign","type":"exact"},{"name":"benign axillary neoplasm","type":"exact"}],"termid":"MONDO:0036781","xrefs":{"Monarch":{"xref_id":"0036781"}}}


id: GO:0050973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in equilibrioception in which a mechanical stimulus is received and converted into a molecular signal. During equilibrioception, mechanical stimuli may be in the form of input from pressure receptors or from the labyrinth system of the inner ears.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"equilibrioception","termid":"GO:0050957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in equilibrioception","synonyms":[{"name":"equilibrioception, detection of mechanical stimulus","type":"exact"},{"name":"equilibrioception, sensory detection of mechanical stimulus","type":"exact"},{"name":"equilibrioception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during equilibrioception","type":"exact"},{"name":"sensory transduction of mechanical stimulus during equilibrioception","type":"exact"}],"termid":"GO:0050973"}


id: MONDO:0020622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--stoltzfus system (obsolete MONDO:0020622)","secondary_identifiers":["OMIM:111800"],"synonyms":[{"name":"BLOOD GROUP--STOLTZFUS SYSTEM","type":"related"},{"name":"Sf","type":"related"},{"name":"blood group, Stoltzfus system","type":"exact"}],"termid":"MONDO:0020622","xrefs":{"Monarch":{"xref_id":"0020622"}}}


id: PBO:0075587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 14 (putative)","termid":"PBO:0075587"}


id: PBO:0085955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant lacks mitochondrial DNA and cannot grow on glycerol; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085955"}


id: PBO:0004529
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine (K) and glutamic acid (E) Rich protein","termid":"PBO:0004529"}


id: GO:0019013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The complete protein-nucleic acid complex that is the packaged form of the genome in a virus particle.","definition_xrefs":["ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral nucleocapsid","secondary_identifiers":["GO:0019014"],"synonyms":[{"name":"core","type":"broad"},{"name":"nucleocapsid","type":"exact"}],"termid":"GO:0019013"}


id: PBO:0081331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 132","termid":"PBO:0081331"}


id: GO:0070037
data:
  {"annotated_genes":["SJAG_02024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75981],"is_not":false,"summary":null,"term":"GO:0070037"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a pseudouridine residue in an rRNA molecule.","definition_xrefs":["GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016741","GO:0140098","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6790906"],"termid":"GO:0070037","terms_by_termid":{"GO:0070037":null}}


id: GO:0005125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a soluble extracellular gene product that interacts with a receptor to effect a change in the activity of the receptor to control the survival, growth, differentiation and effector function of tissues and cells.","definition_xrefs":["ISBN:0198599471","PMID:11530802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"positively_regulates","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0005488","GO:0098772","GO:0038023","GO:0005515"],"is_obsolete":false,"name":"cytokine activity","synonyms":[{"name":"autocrine activity","type":"related"},{"name":"paracrine activity","type":"related"},{"name":"phytocytokine activity","type":"narrow"}],"termid":"GO:0005125"}


id: MONDO:0033563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 90","secondary_identifiers":["UMLS:C5436588","DOID:0112147","MEDGEN:1733837","OMIM:619007"],"synonyms":[{"name":"RETINITIS PIGMENTOSA 90","type":"related"},{"name":"RP90","type":"related"}],"termid":"MONDO:0033563","xrefs":{"Monarch":{"xref_id":"0033563"}}}


id: SO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small non coding RNA sequence, present in the cytoplasm.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"scRNA_primary_transcript","termid":"SO:0000012"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:scRNA","type":"exact"},{"name":"small cytoplasmic RNA","type":"exact"}],"termid":"SO:0000013"}


id: MONDO:1010977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease, non-human animal","termid":"MONDO:1010231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, pig","secondary_identifiers":["OMIA:000485-9823"],"termid":"MONDO:1010977","xrefs":{"Monarch":{"xref_id":"1010977"}}}


id: PBO:0075683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid receptor RNA activator 1","termid":"PBO:0075683"}


id: MOD:01931
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-phospho-L-lysine.","definition_xrefs":["PubMed:20144148","RESID:AA0585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"N-phosphorylated residue","termid":"MOD:01456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"N6-phospho-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(phosphonoamino)hexanoic acid","type":"exact"},{"name":"(2S)-2-azanyl-6-(phosphonoamino)hexanoic acid","type":"exact"},{"name":"6-phospholysine","type":"exact"},{"name":"N(6)-phosphonolysine","type":"exact"},{"name":"N(epsilon)-phospholysine","type":"exact"},{"name":"N(epsilon)-phosphonolysine","type":"exact"},{"name":"N(epsilon)-phosphonyllysine","type":"exact"},{"name":"N(epsilon)-phosphoryllysine","type":"exact"},{"name":"N6-phospho-L-lysine","type":"exact"}],"termid":"MOD:01931"}


id: MONDO:0035683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal hypoplasia congenita (obsolete MONDO:0035683)","secondary_identifiers":["Orphanet:595337"],"termid":"MONDO:0035683","xrefs":{"Monarch":{"xref_id":"0035683"}}}


id: PBO:0078409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 3-1","termid":"PBO:0078409"}


id: GO:1901464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole metabolic process","termid":"GO:1901402"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"down regulation of tetrapyrrole anabolism","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"down regulation of tetrapyrrole formation","type":"exact"},{"name":"down regulation of tetrapyrrole synthesis","type":"exact"},{"name":"down-regulation of tetrapyrrole anabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"down-regulation of tetrapyrrole formation","type":"exact"},{"name":"down-regulation of tetrapyrrole synthesis","type":"exact"},{"name":"downregulation of tetrapyrrole anabolism","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"downregulation of tetrapyrrole formation","type":"exact"},{"name":"downregulation of tetrapyrrole synthesis","type":"exact"},{"name":"inhibition of tetrapyrrole anabolism","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthesis","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthetic process","type":"narrow"},{"name":"inhibition of tetrapyrrole formation","type":"exact"},{"name":"inhibition of tetrapyrrole synthesis","type":"exact"},{"name":"negative regulation of tetrapyrrole anabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"negative regulation of tetrapyrrole formation","type":"exact"},{"name":"negative regulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901464"}


id: PR:Q10178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3B subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01797","PANTHER:PTHR12097:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.09c","secondary_identifiers":["UniProtKB:Q10178"],"synonyms":[{"name":"Spom972h-SF3B1","type":"exact"}],"termid":"PR:Q10178"}


id: GO:0004052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,12S,14Z)-12-hydroperoxyicosa-5,8,10,14-tetraenoate.","definition_xrefs":["RHEA:10428","EC:1.13.11.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"arachidonate 12(S)-lipoxygenase activity","secondary_identifiers":["Reactome:R-HSA-9026006","Reactome:R-HSA-2161964","Reactome:R-HSA-9025957","Reactome:R-HSA-9026007","Reactome:R-HSA-2161948","MetaCyc:ARACHIDONATE-12-LIPOXYGENASE-RXN","KEGG_REACTION:R01596","Reactome:R-HSA-9024983","Reactome:R-HSA-2161950"],"synonyms":[{"name":"12-lipoxygenase activity","type":"related"},{"name":"12Delta-lipoxygenase activity","type":"related"},{"name":"12S-lipoxygenase activity","type":"related"},{"name":"C-12 lipoxygenase activity","type":"related"},{"name":"LTA4 synthase activity","type":"related"},{"name":"arachidonate:oxygen 12-oxidoreductase activity","type":"related"},{"name":"delta12-lipoxygenase activity","type":"related"},{"name":"leukotriene A4 synthase","type":"broad"}],"termid":"GO:0004052"}


id: PBO:0082558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide-activated, type 2A-related serine-threonine phosphatase; functions in G1/S transition of mitotic cycle; controls lifespan, mitochondrial function, cell cycle progression by regulating HXK2 phosphorylation; regulator of COPII coat dephosphorylation; required for ER to Golgi traffic; interacts with Hrr25p kinase; cytoplasmic and nuclear protein that modulates functions mediated by Pkc1p including cell wall and actin cytoskeleton organization; similar to human PP6","termid":"PBO:0082558"}


id: GO:0110160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase (spindle phase one).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle formation (spindle phase one)","termid":"GO:0110159"},{"relation_name":"is_a","term_name":"negative regulation of spindle assembly","termid":"GO:1905831"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"negative regulation of mitotic spindle formation (spindle phase one)","termid":"GO:0110160"}


id: PBO:0065951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD17 pseudogene 2","termid":"PBO:0065951"}


id: GO:0035204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lamellocyte differentiation. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellocyte differentiation","termid":"GO:0035203"},{"relation_name":"is_a","term_name":"negative regulation of hemocyte differentiation","termid":"GO:0045611"},{"relation_name":"negatively_regulates","term_name":"lamellocyte differentiation","termid":"GO:0035171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellocyte differentiation","synonyms":[{"name":"down regulation of lamellocyte differentiation","type":"exact"},{"name":"down-regulation of lamellocyte differentiation","type":"exact"},{"name":"downregulation of lamellocyte differentiation","type":"exact"},{"name":"inhibition of lamellocyte differentiation","type":"narrow"}],"termid":"GO:0035204"}


id: PBO:0017777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transmembrane transporter Ybt1","termid":"PBO:0017777"}


id: MONDO:0019438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AL Amyloidosis is a plasma cell disorder characterized by the aggregation and deposition of insoluble amyloid fibrils derived from misfolding of monoclonal immunoglobulin light chains usually produced by a plasma cell tumor. It usually presents as primary systemic amyloidosis (PSA) with multiple organ involvement and less frequently as primary localized amyloidosis (PLA) restricted to a single organ.","definition_xrefs":["Orphanet:85443"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"non-familial hypertrophic cardiomyopathy","termid":"MONDO:0016330"},{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"AL amyloidosis","secondary_identifiers":["NANDO:1200211","MESH:C531616","GARD:5797","icd11.foundation:1061366491","MedDRA:10036673","NCIT:C158963","MEDGEN:75674","icd11.foundation:113043090","DOID:0080933","UMLS:C0268381"],"synonyms":[{"name":"Light chain amyloidosis","type":"related"},{"name":"Light-chain amyloidosis","type":"exact"},{"name":"amyloidosis AL","type":"related"},{"name":"amyloidosis primary systemic","type":"related"},{"name":"primary AL amyloidosis","type":"related"},{"name":"primary amyloidosis","type":"exact"},{"name":"primary systemic AL amyloidosis","type":"related"},{"name":"primary systemic amyloidosis","type":"related"},{"name":"systemic AL amyloidsis","type":"related"}],"termid":"MONDO:0019438","xrefs":{"Monarch":{"xref_id":"0019438"}}}


id: GO:1900049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone exchange.","definition_xrefs":["PMID:20332092","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone exchange (obsolete GO:1900049)","synonyms":[{"name":"regulation of histone chaperone","type":"related"},{"name":"regulation of histone displacement","type":"exact"},{"name":"regulation of histone replacement","type":"exact"}],"termid":"GO:1900049"}


id: PBO:0034096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_paralogy_relationship_with","termid":"PBO:0034096"}


id: GO:0017185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-lysine to form peptidyl-hydroxylysine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine hydroxylation","termid":"GO:0017185"}


id: MONDO:0006101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bartholin gland squamous cell carcinoma (obsolete MONDO:0006101)","termid":"MONDO:0006101","xrefs":{"Monarch":{"xref_id":"0006101"}}}


id: PR:Q9UUG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC926.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUG2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized leucine-rich repeat-containing protein C926.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.06c","synonyms":[{"name":"Spom972h-SPAC926.06c","type":"exact"}],"termid":"PR:Q9UUG2"}


id: GO:0045190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin genes involved in immune response","termid":"GO:0002204"},{"relation_name":"is_a","term_name":"B cell activation involved in immune response","termid":"GO:0002312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0010467"],"is_obsolete":false,"name":"isotype switching","secondary_identifiers":["Wikipedia:Immunoglobulin_class_switching"],"synonyms":[{"name":"class switch recombination","type":"exact"},{"name":"class switching","type":"exact"},{"name":"isotype switch recombination","type":"exact"}],"termid":"GO:0045190"}


id: PBO:0063351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNX4 divergent transcript","termid":"PBO:0063351"}


id: GO:0048210
data:
  {"annotated_genes":["SJAG_03889"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96268],"is_not":false,"summary":null,"term":"GO:0048210"}]},"cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a Golgi transport vesicle to the target lipid bilayer membrane.","definition_xrefs":["PMID:10219233","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"Golgi vesicle fusion to target membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi-derived vesicle fusion to target membrane","type":"exact"},{"name":"dictyosome vesicle fusion to target membrane","type":"narrow"}],"termid":"GO:0048210","terms_by_termid":{"GO:0048210":null}}


id: PR:O59785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC320.08 gene.","definition_xrefs":["UniProtKB:O59785","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized solute carrier family 35 member C320.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.08","synonyms":[{"name":"Spom972h-SPCC320.08","type":"exact"}],"termid":"PR:O59785"}


id: PBO:0049897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocysteine inducible ER protein with ubiquitin like domain 1","termid":"PBO:0049897"}


id: GO:0032379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of intracellular lipid transport","termid":"GO:0032377"},{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"positively_regulates","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular lipid transport","synonyms":[{"name":"activation of intracellular lipid transport","type":"narrow"},{"name":"stimulation of intracellular lipid transport","type":"narrow"},{"name":"up regulation of intracellular lipid transport","type":"exact"},{"name":"up-regulation of intracellular lipid transport","type":"exact"},{"name":"upregulation of intracellular lipid transport","type":"exact"}],"termid":"GO:0032379"}


id: GO:0022871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sorbose(out) = protein histidine + sorbose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["RHEA:49296","PMID:10613875","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"sorbose transmembrane transporter activity","termid":"GO:0019194"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0022857","GO:0016740","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sorbose phosphotransferase system transporter activity","secondary_identifiers":["MetaCyc:RXN-15094","EC:2.7.1.206"],"synonyms":[{"name":"sorbose PTS transporter activity","type":"exact"}],"termid":"GO:0022871"}


id: PBO:0065105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAR2B antisense RNA 1","termid":"PBO:0065105"}


id: MOD:00691
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of an 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}


id: PBO:0078532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 25","termid":"PBO:0078532"}


id: MONDO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental disorder of mental health that categorizes specific learning disabilities and developmental disorders affecting coordination.","definition_xrefs":["DOID:0060038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental disorder of mental health","termid":"MONDO:0005503"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific developmental disorder","secondary_identifiers":["MEDGEN:508157","ICD9:315.8","SCTID:10720004","UMLS:C0037785"],"synonyms":[{"name":"specific delays in development","type":"related"},{"name":"specific developmental disorder","type":"exact"}],"termid":"MONDO:0000592","xrefs":{"Monarch":{"xref_id":"0000592"}}}


id: MONDO:0018309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hirschsprung disease (HSCR) is a congenital intestinal motility disorder that is characterized by signs of intestinal obstruction due to the presence of an aganglionic segment of variable extent in the terminal part of the colon.","definition_xrefs":["Orphanet:388"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"megacolon","termid":"MONDO:0001273"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Hirschsprung disease","secondary_identifiers":["UMLS:C0019569","NANDO:1200903","GARD:6660","MESH:D006627","NANDO:2200948","NANDO:2200945","NORD:1244","SCTID:204739008","icd11.foundation:1772690306","MEDGEN:5559","OMIMPS:142623","NCIT:C34700","DOID:10487","MedDRA:10010539"],"synonyms":[{"name":"HSCR","type":"exact"},{"name":"Hirschsprung disease","type":"exact"},{"name":"Hirschsprung disease susceptibility","type":"exact"},{"name":"Hirschsprung's disease","type":"exact"},{"name":"aganglionic megacolon","type":"exact"},{"name":"congenital intestinal aganglionosis","type":"exact"},{"name":"congenital megacolon","type":"exact"},{"name":"macrocolon","type":"related"},{"name":"pelvirectal achalasia","type":"exact"}],"termid":"MONDO:0018309","xrefs":{"Monarch":{"xref_id":"0018309"}}}


id: GO:0042080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI/GSI anchor biosynthetic process (obsolete GO:0042080)","synonyms":[{"name":"GPI/GSI anchor anabolism","type":"exact"},{"name":"GPI/GSI anchor biosynthesis","type":"exact"},{"name":"GPI/GSI anchor biosynthetic process","type":"exact"},{"name":"GPI/GSI anchor formation","type":"exact"},{"name":"GPI/GSI anchor synthesis","type":"exact"}],"termid":"GO:0042080"}


id: GO:0047086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NADPH + progesterone = H2O + NADP+ + testosterone acetate.","definition_xrefs":["EC:1.14.13.54","MetaCyc:1.14.13.54-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ketosteroid monooxygenase activity","synonyms":[{"name":"17alpha-hydroxyprogesterone, NADPH2:oxygen oxidoreductase (20-hydroxylating, side-chain cleaving)","type":"related"},{"name":"androstenedione, NADPH2:oxygen oxidoreductase (17-hydroxylating, lactonizing)","type":"related"},{"name":"ketosteroid,NADPH:oxygen oxidoreductase (20-hydroxylating, ester-producing/20-hydroxylating, side-chain cleaving/17-hydroxylating, lactonizing)","type":"related"},{"name":"progesterone, NADPH2:oxygen oxidoreductase (20-hydroxylating, ester-producing)","type":"related"},{"name":"steroid-ketone monooxygenase activity","type":"related"}],"termid":"GO:0047086"}


id: GO:0048308
data:
  {"annotated_genes":["SJAG_02848","SJAG_04315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000001"},{"annotations":[107015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045033"}]},"cv_name":"biological_process","definition":"The partitioning of organelles between daughter cells at cell division.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02848":null,"SJAG_04315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organelle inheritance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048308","terms_by_termid":{"GO:0000001":null,"GO:0045033":null}}


id: GO:0044129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the symbiont activates or maintains its progression from an initial condition to a later condition, within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development of symbiont in host","termid":"GO:0044127"},{"relation_name":"is_a","term_name":"positive regulation of formation of structure involved in a symbiotic process","termid":"GO:0044149"},{"relation_name":"positively_regulates","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of development of symbiont in host","termid":"GO:0044129"}


id: GO:1990756
data:
  {"annotated_genes":["SJAG_02651","SJAG_00651","SJAG_01392","SJAG_00262","SJAG_04035","SJAG_03651","SJAG_02753","SJAG_00656","SJAG_02822","SJAG_03218","SJAG_00192","SJAG_01617","SJAG_02162","SJAG_01068","SJAG_01022"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95865,98098,98780,99958,101793,104915,105199,107528,107548,109413,111363,115979,116126,117081,117182],"is_not":false,"summary":null,"term":"GO:1990756"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a ubiquitin-like ligase (including ubiquitin ligase and UFM1 ligase) and its substrate. Usually mediated by F-box BTB/POZ domain proteins.","definition_xrefs":["PMID:24658274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-substrate adaptor activity","termid":"GO:0140767"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00262":null,"SJAG_00651":null,"SJAG_00656":null,"SJAG_01022":null,"SJAG_01068":null,"SJAG_01392":null,"SJAG_01617":null,"SJAG_02162":null,"SJAG_02651":null,"SJAG_02753":null,"SJAG_02822":null,"SJAG_03218":null,"SJAG_03651":null,"SJAG_04035":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-like ligase-substrate adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UFM1 ligase-substrate adaptor activity","type":"narrow"},{"name":"protein binding, bridging involved in substrate recognition for ubiquitination","type":"exact"},{"name":"ubiquitin ligase substrate adaptor","type":"exact"},{"name":"ubiquitin ligase-substrate adaptor activity","type":"narrow"}],"termid":"GO:1990756","terms_by_termid":{"GO:1990756":null}}


id: PBO:0029425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_palmitoylation","termid":"PBO:0029425"}


id: GO:1901949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process","termid":"GO:1901947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate biosynthetic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate anabolism","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate biosynthesis","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate formation","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate synthesis","type":"exact"}],"termid":"GO:1901949"}


id: MONDO:0060507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dystrophy with or without macular staphyloma","secondary_identifiers":["MEDGEN:1381980","UMLS:C4479651","Orphanet:653709","OMIM:617547"],"synonyms":[{"name":"RDMS","type":"related"},{"name":"retinal dystrophy with macular staphyloma","type":"exact"},{"name":"retinal dystrophy with or without macular staphyloma","type":"exact"}],"termid":"MONDO:0060507","xrefs":{"Monarch":{"xref_id":"0060507"}}}


