# terms

id: PBO:0048153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1","termid":"PBO:0048153"}


id: PBO:0087100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit; required for translational accuracy; homologous to mammalian ribosomal protein S23 and bacterial S12; RPS23A has a paralog, RPS23B, that arose from the whole genome duplication; deletion of both RPS23A and RPS23B is lethal","termid":"PBO:0087100"}


id: MONDO:1010306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrodysplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrodysplasia, non-human animal","secondary_identifiers":["OMIA:001315"],"termid":"MONDO:1010306","xrefs":{"Monarch":{"xref_id":"1010306"}}}


id: MONDO:0045016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of cholesterol catabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol metabolism disease","termid":"MONDO:0045008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"cholesterol catabolic process disease","secondary_identifiers":["SCTID:238032002","MEDGEN:575238","UMLS:C0342825"],"synonyms":[{"name":"cholesterol catabolism disease","type":"exact"},{"name":"disorder of cholesterol catabolic process","type":"exact"},{"name":"disorder of cholesterol catabolism","type":"exact"}],"termid":"MONDO:0045016","xrefs":{"Monarch":{"xref_id":"0045016"}}}


id: PBO:0051844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 1","termid":"PBO:0051844"}


id: GO:0071463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a humidity stimulus, moisture in the atmosphere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to humidity","termid":"GO:0009270"},{"relation_name":"is_a","term_name":"cellular response to water stimulus","termid":"GO:0071462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to humidity","termid":"GO:0071463"}


id: PBO:0059100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 6","termid":"PBO:0059100"}


id: MONDO:1011140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, domestic cat","secondary_identifiers":["OMIA:001764-9685"],"termid":"MONDO:1011140","xrefs":{"Monarch":{"xref_id":"1011140"}}}


id: PBO:0068576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 27, pseudogene","termid":"PBO:0068576"}


id: MONDO:0975953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pan-Chung-Bellen syndrome","secondary_identifiers":["OMIM:621049"],"termid":"MONDO:0975953","xrefs":{"Monarch":{"xref_id":"0975953"}}}


id: MONDO:1011213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"coloboma, non-human animal","termid":"MONDO:1010319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, chicken","secondary_identifiers":["OMIA:000219-9031"],"termid":"MONDO:1011213","xrefs":{"Monarch":{"xref_id":"1011213"}}}


id: GO:0009329
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two alpha subunits and two beta subunits. Part of the acetyl-CoA carboxylase complex. Catalyzes the transfer of a carboxyl group to form malonyl-CoA.","definition_xrefs":["GOC:jl","PMID:8423010","PMID:2719476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"acetyl-CoA carboxylase complex","termid":"GO:0009317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"acetate CoA-transferase complex","termid":"GO:0009329"}


id: SO:0000793
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000793 engineered_DNA (obsolete SO:0000793)","termid":"SO:0000793"}


id: GO:0019381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide.","definition_xrefs":["GOC:jl","MetaCyc:PWY-5724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"atrazine metabolic process","termid":"GO:0018873"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:atr"],"synonyms":[{"name":"atrazine breakdown","type":"exact"},{"name":"atrazine catabolism","type":"exact"},{"name":"atrazine degradation","type":"exact"}],"termid":"GO:0019381"}


id: PR:O59813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C794.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.03","synonyms":[{"name":"Spom972h-SPCC794.03","type":"exact"}],"termid":"PR:O59813"}


id: PBO:0078148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 26-2","termid":"PBO:0078148"}


id: PBO:0057155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302a","termid":"PBO:0057155"}


id: PBO:0073169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEH1 like nucleoporin","termid":"PBO:0073169"}


id: PBO:0004710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip2 subfamily","termid":"PBO:0004710"}


id: PBO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein Zym1","termid":"PBO:0001523"}


id: GO:0038047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with morphine (17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol), and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"morphine receptor activity","synonyms":[{"name":"mu-opioid receptor activity","type":"related"}],"termid":"GO:0038047"}


id: GO:0099548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by nitric oxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic signaling by nitric oxide","termid":"GO:0099163"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"}


id: PBO:0060993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal hypoxia inducible, placenta associated","termid":"PBO:0060993"}


id: PBO:0016571
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe mEK 1","termid":"PBO:0016571"}


id: PBO:0049121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor associated sorting protein 1","termid":"PBO:0049121"}


id: PBO:0031274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_at_silent_mating-type_cassette","termid":"PBO:0031274"}


id: MONDO:0975752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign vascular tumor","termid":"MONDO:0971115"},{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"littoral cell hemangioma of the spleen","secondary_identifiers":["Orphanet:673538"],"termid":"MONDO:0975752","xrefs":{"Monarch":{"xref_id":"0975752"}}}


id: PATO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The specific wavelength of light emitted by a fluorescent molecule, such as a labelled probe, upon absorption of light at the (higher) excitation wavelength.","definition_xrefs":["web:http://www.expertglossary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation emitting quality","termid":"PATO:0001299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emmision wavelength","termid":"PATO:0002059"}


id: GO:0030379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neurotensin, a neuropeptide active in the central and peripheral nervous system in mammals, and transmitting the signal from one side of the membrane to the other by a mechanism independent of coupling to G proteins.","definition_xrefs":["PMID:9756851","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neurotensin receptor activity, non-G protein-coupled","synonyms":[{"name":"neurotensin receptor activity, non G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, non-G-protein coupled","type":"exact"},{"name":"non G protein coupled neurotensin receptor activity","type":"exact"},{"name":"non-G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"non-G-protein-coupled neurotensin receptor activity","type":"exact"}],"termid":"GO:0030379"}


id: GO:0016623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["EC:1.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}


id: GO:0018927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete methionine and threonine metabolic process (obsolete GO:0018927)","synonyms":[{"name":"methionine and threonine metabolic process","type":"exact"}],"termid":"GO:0018927"}


id: PBO:0074867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 51","termid":"PBO:0074867"}


id: PBO:0036443
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXidative Stress","termid":"PBO:0036443"}


id: PBO:0004219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in vesicle-medated transport (predicted)","termid":"PBO:0004219"}


id: GO:0103009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 3-chlorotoluene + NADH + O2 = 3-chlorobenzyl alcohol + NAD + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-chlorotoluene monooxygenase activity (obsolete GO:0103009)","termid":"GO:0103009"}


id: PBO:0059453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSANTD3 pseudogene 1","termid":"PBO:0059453"}


id: GO:0035837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an ergot alkaloid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"},{"relation_name":"is_a","term_name":"ergot alkaloid metabolic process","termid":"GO:0035836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ergot alkaloid biosynthetic process","synonyms":[{"name":"ergot alkaloid anabolism","type":"exact"},{"name":"ergot alkaloid biosynthesis","type":"exact"},{"name":"ergot alkaloid formation","type":"exact"},{"name":"ergot alkaloid synthesis","type":"exact"}],"termid":"GO:0035837"}


id: FYPO:0003525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the addition of actin monomers to a filament occurs to a greater extent than normal at one or both cell tips.","definition_xrefs":["PMID:24954052","PomBase:mah","GO:0030041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization at cell tip","termid":"FYPO:0003524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased actin filament polymerization at cell tip","synonyms":[{"name":"increased actin filament polymerisation at cell tip","type":"exact"},{"name":"increased actin filament polymerization at cell end","type":"exact"},{"name":"increased actin filament polymerization at cell tip during mitotic cell cycle","type":"related"},{"name":"increased actin filament polymerization at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003525"}


id: GO:0047137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-acetamidofluorene + NAD(P)+ + H2O = N-hydroxy-2-acetamidofluorene + NAD(P)H + H+.","definition_xrefs":["EC:1.7.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-hydroxy-2-acetamidofluorene reductase activity","secondary_identifiers":["MetaCyc:1.7.1.12-RXN"],"synonyms":[{"name":"2-acetamidofluorene:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"N-hydroxy-2-acetylaminofluorene reductase activity","type":"related"},{"name":"NAD(P)H2:N-hydroxy-2-acetamidofluorene N-oxidoreductase activity","type":"related"},{"name":"NAD(P)H:N-hydroxy-2-acetamidofluorene N-oxidoreductase activity","type":"related"}],"termid":"GO:0047137"}


id: FYPO:0006615
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119513,119514],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a greater diameter (thickness; width) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"increased cell diameter","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04522","SJAG_00028"],"single_locus_genotype_uniquenames":["rga4delta","rga6delta"],"synonyms":[{"name":"increased cell thickness","type":"exact"},{"name":"increased cell width","type":"exact"}],"termid":"FYPO:0006615","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0006616":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0074828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 24","termid":"PBO:0074828"}


id: GO:1905578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ERBB3 signaling pathway.","definition_xrefs":["GOC:als","PMID:27353365","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"regulates","term_name":"ERBB3 signaling pathway","termid":"GO:0038129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ERBB3 signaling pathway","synonyms":[{"name":"regulation of ERBB3 signalling pathway","type":"exact"},{"name":"regulation of HER3 signaling pathway","type":"exact"},{"name":"regulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"}],"termid":"GO:1905578"}


id: GO:1905534
data:
  {"annotated_genes":["SJAG_03591","SJAG_00991","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92066,93658,99201],"is_not":false,"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-leucine import across plasma membrane.","definition_xrefs":["GO_REF:0000058","PMID:10467003","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-leucine import across plasma membrane","termid":"GO:1905532"},{"relation_name":"positively_regulates","term_name":"L-leucine import across plasma membrane","termid":"GO:1903801"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-leucine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903130"],"synonyms":[{"name":"activation of L-leucine import into cell","type":"narrow"},{"name":"activation of leucine import into cell","type":"narrow"},{"name":"positive regulation of L-leucine import into cell","type":"exact"},{"name":"positive regulation of leucine import across plasma membrane","type":"broad"},{"name":"up regulation of L-leucine import into cell","type":"exact"},{"name":"upregulation of L-leucine import into cell","type":"exact"}],"termid":"GO:1905534","terms_by_termid":{"GO:1905534":null}}


id: PBO:0081389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 229","termid":"PBO:0081389"}


id: MONDO:0010054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy with intellectual disability","secondary_identifiers":["MESH:C564807","OMIM:271109","UMLS:C1849109","MEDGEN:376518"],"synonyms":[{"name":"spinal muscular atrophy with intellectual disability","type":"exact"},{"name":"spinal muscular atrophy with mental retardation","type":"exact"}],"termid":"MONDO:0010054","xrefs":{"Monarch":{"xref_id":"0010054"}}}


id: PBO:0070176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 90 pseudogene","termid":"PBO:0070176"}


id: PBO:0036137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036137"}


id: GO:0031534
data:
  {"annotated_genes":["SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99549],"is_not":false,"summary":null,"term":"GO:0031534"}]},"cv_name":"biological_process","definition":"The movement of one microtubule along another microtubule, where the motion is directed towards the minus ends of the microtubules.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule sliding","termid":"GO:0051012"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"minus-end directed microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031534","terms_by_termid":{"GO:0031534":null}}


id: MONDO:0008524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomas, multiple","secondary_identifiers":["MESH:C566085","MEDGEN:348321","OMIM:186600","UMLS:C1861302"],"synonyms":[{"name":"syringomas, multiple","type":"exact"}],"termid":"MONDO:0008524","xrefs":{"Monarch":{"xref_id":"0008524"}}}


id: PBO:0036145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036145"}


id: PBO:0041312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 66","termid":"PBO:0041312"}


id: PBO:0042333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD59 molecule (CD59 blood group)","termid":"PBO:0042333"}


id: MONDO:0100112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of a single peroxisomal protein, acyl-CoA binding domain containing protein 5, which forms a contact site between the peroxisomes and the ER. The deficiency is characterized by elevated blood very long-chain fatty acids (VLCFAs), retinal dystrophy, cerebral white matter disease and psychomotor delay.","definition_xrefs":["PMID:27899449","PMID:27799409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of plasmalogens biosynthesis","termid":"MONDO:0017986"},{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"},{"relation_name":"is_a","term_name":"disorder of peroxisomal transporter","termid":"MONDO:0100372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0019053"],"is_obsolete":false,"name":"acyl-CoA binding domain containing protein 5 deficiency","synonyms":[{"name":"ACBD5 deficiency","type":"exact"},{"name":"acyl-CoA binding domain containing protein 5 deficiency","type":"exact"}],"termid":"MONDO:0100112","xrefs":{"Monarch":{"xref_id":"0100112"}}}


id: PBO:0061152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 4","termid":"PBO:0061152"}


id: PBO:0062895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXCT1 antisense RNA 1","termid":"PBO:0062895"}


id: GO:0060158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by dopamine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12675914","GOC:signaling","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating dopamine receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by dopamine receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by dopamine receptor signalling pathway","type":"related"},{"name":"dopamine receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0060158"}


id: PBO:0090470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster assembly and transfer protein Isa2","termid":"PBO:0090470"}


id: MOD:01675
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-(N-acetylaminohexosyl)-L-serine.","definition_xrefs":["OMSSA:184","Unimod:43#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(N-acetylamino)hexosyl-L-serine","synonyms":[{"name":"(S)-2-amino-3-(2-acetamido-2-deoxy-beta-D-hexopyranosyloxy)propanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"O-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-serine","type":"exact"},{"name":"O-(N-acetylhexosaminyl)serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-seryl-beta-N-acetylhexosaminide","type":"exact"},{"name":"O3-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-serine","type":"exact"},{"name":"OHexNAcSer","type":"exact"},{"name":"hexNAcS","type":"exact"}],"termid":"MOD:01675"}


id: PBO:0057920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3622b","termid":"PBO:0057920"}


id: GO:0007220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of successive proteolytic cleavages of the Notch protein, which result in an active form of the receptor.","definition_xrefs":["PMID:12651094","PMID:14986688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Notch receptor processing","synonyms":[{"name":"N receptor processing","type":"exact"}],"termid":"GO:0007220"}


id: PBO:0016883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Isp3","termid":"PBO:0016883"}


id: PBO:0067084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 120, pseudogene","termid":"PBO:0067084"}


id: GO:1905032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane repolarization during cardiac muscle cell action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058","PMID:23157812","GOC:rph","GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"},{"relation_name":"negatively_regulates","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane repolarization during cardiac muscle cell action potential","synonyms":[{"name":"down regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of membrane repolarization during cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of membrane repolarization during cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:1905032"}


id: SO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine methylated at the 4 nitrogen.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4_methylcytosine","secondary_identifiers":["http://www.insdc.org/files/feature_table.html#7.4.2","http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"4-mC","type":"exact"},{"name":"4-methylcytosine","type":"exact"},{"name":"N4 methylcytosine","type":"exact"},{"name":"N4-methylcytosine","type":"exact"},{"name":"N4_methylcytosine","type":"exact"},{"name":"m-4C","type":"exact"},{"name":"m4c","type":"exact"}],"termid":"SO:0001919"}


id: MONDO:0011711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"specific language impairment","termid":"MONDO:0000724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific language impairment 2","secondary_identifiers":["MEDGEN:338273","UMLS:C1847605","OMIM:606712"],"synonyms":[{"name":"SLI2","type":"exact"},{"name":"specific language impairment 2","type":"exact"},{"name":"specific language impairment QTL, 2","type":"exact"},{"name":"specific language impairment quantitative trait locus on chromosome 19","type":"related"}],"termid":"MONDO:0011711","xrefs":{"Monarch":{"xref_id":"0011711"}}}


id: PBO:0075387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP2 antisense RNA 1","termid":"PBO:0075387"}


id: MONDO:0030798
data:
  {"annotated_genes":["SJAG_02772"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87286],"is_not":false,"summary":null,"term":"MONDO:0030798"}]},"cv_name":"mondo","definition":"An autosomal recessive immunologic disorder characterized by the onset of recurrent sinopulmonary infections in early childhood. Laboratory studies reveal hypogammaglobulinemia with decreased memory B cells that show impaired class-switch recombination (CSR) and decreased somatic hypermutation (SHM). Due to abnormal antibody production and impaired self-tolerance, patients may develop autoimmune cytopenias, such as thrombocytopenia, or autoimmune features, such as vitiligo. There are also defects in the T-cell compartment.","definition_xrefs":["OMIM:619846","PMID:32484799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02772":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 99 with hypogammaglobulinemia and autoimmune cytopenias","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5676971","MEDGEN:1801342"],"synonyms":[{"name":"IMD99","type":"exact"},{"name":"immunodeficiency 99 with hypogammaglobulinemia and autoimmune cytopenias","type":"exact"}],"termid":"MONDO:0030798","terms_by_termid":{"MONDO:0030798":null},"xrefs":{"Monarch":{"xref_id":"0030798"}}}


id: GO:0019640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-glucuronate into D-xylulose 5-phosphate.","definition_xrefs":["PMID:27189775","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucuronate catabolic process","termid":"GO:0042840"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate biosynthetic process","termid":"GO:1901159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-glucuronate catabolic process to D-xylulose 5-phosphate","secondary_identifiers":["Reactome:R-HSA-5661270"],"synonyms":[{"name":"glucuronate breakdown to xylulose 5-phosphate","type":"exact"},{"name":"glucuronate catabolic process to xylulose 5-phosphate","type":"exact"},{"name":"glucuronate degradation to xylulose 5-phosphate","type":"exact"}],"termid":"GO:0019640"}


id: GO:0010055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an atrichoblast, a root epidermal cell that will not give rise to a root hair.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrichoblast differentiation","termid":"GO:0010055"}


id: GO:1902555
data:
  {"annotated_genes":["SJAG_03952","SJAG_00955","SJAG_02374","SJAG_03328","SJAG_01581","SJAG_01623","SJAG_02547","SJAG_06613","SJAG_02553","SJAG_04062","SJAG_01056","SJAG_03234","SJAG_04582","SJAG_01260","SJAG_02275","SJAG_03789","SJAG_03796","SJAG_01551","SJAG_04916","SJAG_00306","SJAG_03496","SJAG_03425","SJAG_04252","SJAG_04907","SJAG_00754","SJAG_01369"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95284,64842,92017,118883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[118922,99810,71957,71524,63759,91408,104875,115634,71991,60624,115722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005655"},{"annotations":[91409,115636,76417,105981,115724,63758,73912,105982,71566,71989,79597,97110,60623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000172"},{"annotations":[118526,104430,72018,78959,117512,118888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120330"},{"annotations":[79311,60687,71670,74229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000214"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endoribonuclease activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:18191223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease complex","termid":"GO:1905348"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00754":null,"SJAG_00955":null,"SJAG_01056":null,"SJAG_01260":null,"SJAG_01369":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03425":null,"SJAG_03496":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04062":null,"SJAG_04252":null,"SJAG_04582":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"endoribonuclease complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1902555","terms_by_termid":{"GO:0000172":null,"GO:0000214":null,"GO:0005655":null,"GO:0090730":null,"GO:0120330":null}}


id: PATO:0000290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000290 absolute respiratory rate (obsolete PATO:0000290)","termid":"PATO:0000290"}


id: FYPO:0008202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic sister chromatid separation occurs in meiosis I due to erroneous merotelic kinetochore attachment.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"equational sister chromatid separation at meiosis I","termid":"FYPO:0008202"}


id: PR:000027516
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:12637524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prz1/UnMod","pombase_gene_id":"SPAC4G8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: transcriptional regulator prz1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-prz1/UnMod","type":"exact"},{"name":"prz1/UnMod","type":"exact"}],"termid":"PR:000027516"}


id: PBO:0045619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 31 (pseudogene)","termid":"PBO:0045619"}


id: FYPO:0006499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which disassembly of the cell wall at the site of cell-cell fusion during mating is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cell wall organization","termid":"FYPO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0000002","FYPO:0004805","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall disassembly at cell fusion site","synonyms":[{"name":"abnormal cell wall disassembly at cell fusion site during conjugation with cellular fusion","type":"exact"},{"name":"abnormal cell wall disassembly at cell fusion site during mating","type":"exact"},{"name":"abnormal cell wall disassembly at cell-cell fusion focus","type":"exact"},{"name":"abnormal cell wall disassembly at cell-cell fusion site","type":"exact"},{"name":"abnormal cell wall disassembly during mating","type":"exact"},{"name":"abnormal fungal-type cell wall disassembly at cell fusion site","type":"exact"},{"name":"abnormal fungal-type cell wall disassembly involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0006499"}


id: GO:0030617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A TGF-beta cytoplasmic mediator that inhibits the signaling function of common-partner and pathway-specific mediators.","definition_xrefs":["PMID:9759503"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity (obsolete GO:0030617)","synonyms":[{"name":"TGF-beta receptor, inhibitory cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, inhibitory cytoplasmic mediator activity","type":"exact"},{"name":"inhibitory SMAD protein","type":"related"}],"termid":"GO:0030617"}


id: PBO:0091497
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single polypeptide of 70 kDa is produced","termid":"PBO:0091497"}


id: PBO:0088464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER UDP-N-acetylglucosamine transmembrane transporter","termid":"PBO:0088464"}


id: PBO:0069737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1018, pseudogene","termid":"PBO:0069737"}


id: PBO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk6 (predicted)","termid":"PBO:0001720"}


id: PBO:0049153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAMD1A antisense RNA 1","termid":"PBO:0049153"}


id: PBO:0087917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor required for response to pheromones; also required during meiosis; exists in two forms, a slower-migrating form more abundant during vegetative growth and a faster-migrating form induced by pheromone; null mutant exhibits abnormal lipid metabolic phenotype","termid":"PBO:0087917"}


id: GO:0061159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of bipolar intracellular organization or cell growth patterns that contribute to cell morphogenesis. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"},{"relation_name":"part_of","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of bipolar cell polarity involved in cell morphogenesis","termid":"GO:0061159"}


id: PBO:0060171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated scaffold protein 1","termid":"PBO:0060171"}


id: GO:0160124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a guanyl nucleotide exchange factor.","definition_xrefs":["PMID:37463208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0098772","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"guanyl nucleotide exchange factor activator activity","termid":"GO:0160124"}


id: MONDO:0010944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import-stimulating factor","secondary_identifiers":["MEDGEN:331468","UMLS:C1833246","OMIM:600851"],"synonyms":[{"name":"MSF","type":"related"},{"name":"mitochondrial import-stimulating factor","type":"exact"}],"termid":"MONDO:0010944","xrefs":{"Monarch":{"xref_id":"0010944"}}}


id: PBO:0081293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75B, pseudogene","termid":"PBO:0081293"}


id: PBO:0058436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5000","termid":"PBO:0058436"}


id: GO:0035849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nephric duct grows along its axis. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["PMID:16216236","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"nephric duct morphogenesis","termid":"GO:0072178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct elongation","termid":"GO:0035849"}


id: PBO:0066104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGEF domain family member 1B","termid":"PBO:0066104"}


id: GO:0036388
data:
  {"annotated_genes":["SJAG_00247","SJAG_02607","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115355,103642,110889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the pre-replicative complex, a protein-DNA complex that forms at the origin of replication during the initial step of DNA replication and allows the origin to become competent, or 'licensed', for replication.","definition_xrefs":["GOC:bhm","GOC:jh2","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0065003","GO:0006259","GO:0008150","GO:0006260","GO:0044085"],"is_obsolete":false,"name":"pre-replicative complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-68867"],"synonyms":[{"name":"pre-RC assembly","type":"exact"},{"name":"pre-replication complex assembly","type":"related"}],"termid":"GO:0036388","terms_by_termid":{"GO:1902985":null}}


id: PBO:0081049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 7","termid":"PBO:0081049"}


id: MONDO:0015875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare non-malformative uterine adnexal disease (obsolete MONDO:0015875)","secondary_identifiers":["Orphanet:180303"],"termid":"MONDO:0015875","xrefs":{"Monarch":{"xref_id":"0015875"}}}


id: GO:0072076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a nephrogenic mesenchyme from an initial condition to its mature state. This process begins with the formation of nephrogenic mesenchyme and ends with the mature structure. Nephrogenic mesenchyme is the tissue made up of loosely connected mesenchymal cells in the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme development","termid":"GO:0072074"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrogenic mesenchyme development","termid":"GO:0072076"}


id: FYPO:0002063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a 3'-5'-exoribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"}


id: MONDO:0032715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 69","secondary_identifiers":["UMLS:C5193067","DOID:0081230","MEDGEN:1676539","OMIM:618383"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL RECESSIVE 69","type":"related"},{"name":"MRT69","type":"related"},{"name":"Mental Retardation, Autosomal Recessive 69","type":"related"}],"termid":"MONDO:0032715","xrefs":{"Monarch":{"xref_id":"0032715"}}}


id: PBO:0088436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor","termid":"PBO:0088436"}


id: PATO:0000358
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000358 sugar concentration value (obsolete PATO:0000358)","termid":"PATO:0000358"}


id: GO:1905365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intralumenal vesicle formation.","definition_xrefs":["GOC:bc","GO_REF:0000058","GOC:TermGenie","PMID:26911690","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endosome organization","termid":"GO:1904978"},{"relation_name":"regulates","term_name":"intralumenal vesicle formation","termid":"GO:0070676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of intralumenal vesicle formation","synonyms":[{"name":"regulation of endosome membrane budding","type":"exact"}],"termid":"GO:1905365"}


id: MONDO:0004711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyloidosis (obsolete MONDO:0004711)","synonyms":[{"name":"obsolete amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0004711","xrefs":{"Monarch":{"xref_id":"0004711"}}}


id: MONDO:0007773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperproglucagonemia","secondary_identifiers":["UMLS:C1840388","MESH:C564159","MEDGEN:326726","OMIM:145270"],"synonyms":[{"name":"glucagon, large molecular weight species of","type":"related"},{"name":"hyperproglucagonemia","type":"exact"}],"termid":"MONDO:0007773","xrefs":{"Monarch":{"xref_id":"0007773"}}}


id: PBO:0085957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutation suppresses cdc13-1 temperature sensitivity; (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0085957"}


id: GO:1904449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aspartate secretion.","definition_xrefs":["PMID:2342602","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"is_a","term_name":"regulation of aspartate secretion","termid":"GO:1904448"},{"relation_name":"negatively_regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of aspartate secretion","synonyms":[{"name":"down regulation of aspartate secretion","type":"exact"},{"name":"down-regulation of aspartate secretion","type":"exact"},{"name":"downregulation of aspartate secretion","type":"exact"},{"name":"inhibition of aspartate secretion","type":"narrow"}],"termid":"GO:1904449"}


id: PBO:0119293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase Coq4","termid":"PBO:0119293"}


id: PBO:0090489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate synthase (GOGAT) Glt1","termid":"PBO:0090489"}


id: MONDO:0020845
data:
  {"annotated_genes":["SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86743],"is_not":false,"summary":null,"term":"MONDO:0020845"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0002320","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111524","MEDGEN:1648331","OMIM:618098","UMLS:C4748184"],"synonyms":[{"name":"PEOB5","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 5","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 5","type":"exact"}],"termid":"MONDO:0020845","terms_by_termid":{"MONDO:0020845":null},"xrefs":{"Monarch":{"xref_id":"0020845"}}}


id: PBO:0047787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 4","termid":"PBO:0047787"}


id: MONDO:0000510
data:
  {"annotated_genes":["SJAG_01236","SJAG_02274"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010080"},{"annotations":[86447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014889"}]},"cv_name":"mondo","definition":"A neurodegenerative disease that is characterized by the abnormal accumulation of aggregates of alpha-synuclein protein in neurons, nerve fibers or glial cells. [url:http://en.wikipedia.org/wiki/Synucleinopathies ]","definition_xrefs":["DOID:0050890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"proteostasis deficiencies","termid":"MONDO:0021179"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01236":null,"SJAG_02274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"synucleinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5191670","MESH:D000080874","MEDGEN:1682194"],"synonyms":[{"name":"alpha synucleinopathies","type":"related"},{"name":"synucleinopathies","type":"related"}],"termid":"MONDO:0000510","terms_by_termid":{"MONDO:0010080":null,"MONDO:0014889":null},"xrefs":{"Monarch":{"xref_id":"0000510"}}}


id: PBO:0070599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 66","termid":"PBO:0070599"}


id: PBO:0038657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 7, tartrate resistant (putative)","termid":"PBO:0038657"}


id: PBO:0004058
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required in h+ but not in h-cells","termid":"PBO:0004058"}


id: PBO:0058179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4473","termid":"PBO:0058179"}


id: PBO:0028382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization_during_G0","termid":"PBO:0028382"}


id: PBO:0074069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 44","termid":"PBO:0074069"}


id: MONDO:0003328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the fallopian tube and originates from mesothelial cells. It is characterized by the presence of gland-like structures that are lined by flat or cuboidal cells. It is usually discovered as an incidental finding.","definition_xrefs":["NCIT:C40129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube benign neoplasm","termid":"MONDO:0000645"},{"relation_name":"is_a","term_name":"benign mesothelioma","termid":"MONDO:0002373"},{"relation_name":"is_a","term_name":"adenomatoid tumor","termid":"MONDO:0004230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube adenomatoid tumor","secondary_identifiers":["DOID:5196","MEDGEN:273291","UMLS:C1517110"],"synonyms":[{"name":"fallopian tube adenomatoid tumor","type":"exact"}],"termid":"MONDO:0003328","xrefs":{"Monarch":{"xref_id":"0003328"}}}


id: PBO:0031582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_rate","termid":"PBO:0031582"}


id: GO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A trimeric protein complex which in E. coli is composed of the subunits MreB, MreC and MreD. The complex directs longitudinal cell wall synthesis, maintaining cell morphology.","definition_xrefs":["GOC:jl","PMID:15612918"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome segregation-directing complex (obsolete GO:0043913)","synonyms":[{"name":"MreBCD complex","type":"narrow"},{"name":"chromosome segregation directing complex","type":"exact"},{"name":"longitudinal peptidoglycan synthesis-directing complex","type":"exact"}],"termid":"GO:0043913"}


id: GO:0170007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a lipid droplet with an endoplasmic reticulum membrane, via membrane lipid binding, to establish membrane contact sites and mediate exchange and communication.","definition_xrefs":["PMID:35389430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"endoplasmic reticulum-lipid droplet tether activity","termid":"GO:0170007"}


id: PBO:0047437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 8","termid":"PBO:0047437"}


id: MONDO:0042458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Trichinella spiralis.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichinellosis","termid":"MONDO:0019444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Trichinella spiralis infectious disease","secondary_identifiers":["UMLS:C3887668","SCTID:88264003","MEDGEN:854509"],"synonyms":[{"name":"Trichinella spiralis caused disease or disorder","type":"exact"},{"name":"Trichinella spiralis disease or disorder","type":"exact"},{"name":"infection by larvae of Trichinella spiralis","type":"exact"},{"name":"infection caused by larvae of Trichinella spiralis","type":"related"},{"name":"trichinelliasis caused by Trichinella spiralis","type":"related"},{"name":"trichinellosis caused by Trichinella spiralis","type":"related"},{"name":"trichiniasis caused by Trichinella spiralis","type":"related"},{"name":"trichinosis caused by Trichinella spiralis","type":"related"}],"termid":"MONDO:0042458","xrefs":{"Monarch":{"xref_id":"0042458"}}}


id: MONDO:0009223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the LHB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"},{"relation_name":"is_a","term_name":"Leydig cell hypoplasia","termid":"MONDO:0019155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 23 with or without anosmia","secondary_identifiers":["DOID:0090091","ICD9:253.4","GARD:10127","MESH:C537919","MEDGEN:82881","UMLS:C0271582","OMIM:228300","Orphanet:325448","SCTID:8829008"],"synonyms":[{"name":"46,XY DSD due to LHB deficiency","type":"exact"},{"name":"46,XY DSD due to luteinizing hormone subunit beta deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to LHB deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to luteinizing hormone subunit beta deficiency","type":"exact"},{"name":"HH23","type":"related"},{"name":"LHB hypogonadotropic hypogonadism","type":"exact"},{"name":"Leydig cell hypoplasia due to LHB deficiency","type":"exact"},{"name":"Leydig cell hypoplasia due to luteinizing hormone subunit beta deficiency","type":"exact"},{"name":"Pasqualini syndrome","type":"exact"},{"name":"eunuchoidism with spermatogenesis, normal FSH and low or normal interstitial cell-stimulating hormone (ICSH)","type":"related"},{"name":"fertile eunuch syndrome","type":"exact"},{"name":"hypogonadotropic hypogonadism 23 without anosmia","type":"related"},{"name":"hypogonadotropic hypogonadism caused by mutation in LHB","type":"exact"}],"termid":"MONDO:0009223","xrefs":{"Monarch":{"xref_id":"0009223"}}}


id: PBO:0077772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 40","termid":"PBO:0077772"}


id: PBO:0036043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036043"}


id: PBO:0077303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 42","termid":"PBO:0077303"}


id: MONDO:0044916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rhabdoid tumor which arises in the soft tissues. It occurs in infants and children and may be associated with loss of chromosome 22. It is characterized by the presence of cells with a large eccentric nucleus, prominent nucleolus, and abundant cytoplasm.","definition_xrefs":["NCIT:C6586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid tumor","termid":"MONDO:0002728"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extrarenal rhabdoid tumor","secondary_identifiers":["UMLS:C1304517","MEDGEN:224918","SCTID:404089007"],"synonyms":[{"name":"extrarenal rhabdoid tumor","type":"exact"},{"name":"malignant extrarenal rhabdoid neoplasm","type":"exact"},{"name":"rhabdoid tumor of soft tissue","type":"exact"},{"name":"rhabdoid tumour of soft tissue","type":"exact"}],"termid":"MONDO:0044916","xrefs":{"Monarch":{"xref_id":"0044916"}}}


id: PBO:0004081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase (predicted)","termid":"PBO:0004081"}


id: MONDO:0008832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A visceral heterotaxy characterized by complete atrioventricular septal defect with a common atrium and univentricular AV connection, total anomalous pulmonary drainage, and transposition or malposition of the great arteries and may be associated with bilateral trilobed lungs, midline liver, asplenia and situs inversus affecting other organs that has material basis in homozygous mutation in the GDF1 gene on chromosome 19p12.","definition_xrefs":["DOID:0060856","PMID:14648004","PMID:20413652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right atrial isomerism","secondary_identifiers":["Orphanet:97548","MedDRA:10068335","HP:0011536","MEDGEN:465274","UMLS:C3178806","GARD:6795","OMIM:208530","NORD:1305"],"synonyms":[{"name":"Ivemark Syndrome","type":"exact"},{"name":"Ivemark syndrome","type":"exact"},{"name":"Polyasplenia","type":"related"},{"name":"RAI","type":"related"},{"name":"Vah, autosomal recessive","type":"related"},{"name":"asplenia syndrome","type":"related"},{"name":"asplenia with cardiovascular anomalies","type":"exact"},{"name":"bilateral right-sidedness sequence","type":"related"},{"name":"heterotaxy, Visceroatrial, autosomal recessive","type":"related"},{"name":"polysplenia syndrome","type":"related"},{"name":"right atrial isomerism","type":"exact"},{"name":"right atrial isomerism (disease)","type":"exact"},{"name":"right atrial isomerism (ivemark)","type":"exact"},{"name":"right isomerism","type":"related"},{"name":"splenic agenesis syndrome","type":"related"}],"termid":"MONDO:0008832","xrefs":{"Monarch":{"xref_id":"0008832"}}}


id: GO:0071454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating a decline in oxygen levels to trace amounts, <0.1%.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to anoxia","termid":"GO:0034059"},{"relation_name":"is_a","term_name":"cellular response to decreased oxygen levels","termid":"GO:0036294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to anoxia","synonyms":[{"name":"cellular response to anaerobic conditions","type":"exact"},{"name":"cellular response to anoxic stress","type":"exact"}],"termid":"GO:0071454"}


id: PBO:0044573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger pseudogene 3","termid":"PBO:0044573"}


id: PBO:0070747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 3","termid":"PBO:0070747"}


id: PBO:0065948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD9 checkpoint clamp component B","termid":"PBO:0065948"}


id: PBO:0042709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 1","termid":"PBO:0042709"}


id: MONDO:0001958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant cerebellar ataxia (obsolete MONDO:0001958)","termid":"MONDO:0001958","xrefs":{"Monarch":{"xref_id":"0001958"}}}


id: PBO:0085347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; required for efficient acyl chain remodeling of newly synthesized phosphatidylethanolamine-derived phosphatidylcholine; required for deacylation of phosphatidylcholine and phosphatidylethanolamine but not phosphatidylinositol; PLB1 has a paralog, PLB3, that arose from the whole genome duplication","termid":"PBO:0085347"}


id: MONDO:1012242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal dystrophy, non-human animal","termid":"MONDO:1011980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dystrophy, dog","secondary_identifiers":["OMIA:000869-9615"],"termid":"MONDO:1012242","xrefs":{"Monarch":{"xref_id":"1012242"}}}


id: MONDO:0011800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 4","secondary_identifiers":["MEDGEN:416425","OMIM:607248","UMLS:C2750944"],"synonyms":[{"name":"GLM4","type":"exact"},{"name":"glioma susceptibility 4","type":"exact"}],"termid":"MONDO:0011800","xrefs":{"Monarch":{"xref_id":"0011800"}}}


id: MONDO:0017215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Calciphylaxis is a disease in which blood vessels (veins and arteries) become blocked by a build-up of calcium in the walls of the vessels, preventing blood from flowing to the skin or internal organs. The lack of blood flow (ischemia) damages healthy tissue and causes itto die (necrosis). The most obvious and frequent symptom of calciphylaxis is damage to the skin, as ulcers can developand become infected easily. Calciphylaxis can also affect fat tissue, internal organs, and skeletal muscle, causing infections, pain, and organ failure.These symptoms are often irreversible, and many individuals with calciphylaxis may not survive more thana few months after they are diagnosed due to infection that spreads throughout the body (sepsis), or organ failure. The exact cause of calciphylaxis is unknown. Treatments may include medications to reduce pain, antibiotics to treat infections, and various approaches to preventing the development or worsening of this condition.","definition_xrefs":["GARD:0005980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcinosis","termid":"MONDO:0002123"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"calciphylaxis","secondary_identifiers":["icd11.foundation:574291789","ICD9:275.49","Orphanet:280062","SCTID:237900002","UMLS:C0006666","MedDRA:10051714","DOID:4734","MEDGEN:2404","NCIT:C84607","MESH:D002115","GARD:5980"],"synonyms":[{"name":"idiopathic calciphylaxis","type":"related"}],"termid":"MONDO:0017215","xrefs":{"Monarch":{"xref_id":"0017215"}}}


id: MONDO:0958356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty in male","termid":"MONDO:0958270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary central precocious puberty in male","secondary_identifiers":["Orphanet:650087","MEDGEN:1853130","UMLS:C5816763"],"termid":"MONDO:0958356","xrefs":{"Monarch":{"xref_id":"0958356"}}}


id: PBO:0111848
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin/tropomyosin family","termid":"PBO:0111848"}


id: PBO:0064651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 2","termid":"PBO:0064651"}


id: PBO:0000824
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ER retention signal","termid":"PBO:0000824"}


id: MONDO:0005075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. Radiation exposure is a risk factor and it is the most common malignant thyroid lesion, comprising 75% to 80% of all thyroid cancers in iodine sufficient countries. Diagnostic procedures include thyroid ultrasound and fine needle biopsy. Microscopically, the diagnosis is based on the distinct characteristics of the malignant cells, which include enlargement, oval shape, elongation, and overlapping of the nuclei. The nuclei also display clearing or have a ground glass appearance.","definition_xrefs":["NCIT:C4035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"differentiated thyroid carcinoma","termid":"MONDO:0015447"},{"relation_name":"is_a","term_name":"thyroid gland adenocarcinoma","termid":"MONDO:0024622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland papillary carcinoma","secondary_identifiers":["EFO:0000641","SCTID:255029007","UMLS:C0238463","ONCOTREE:THPA","DOID:3969","MEDGEN:66773","HP:0002895"],"synonyms":[{"name":"papillary cancer of the thyroid","type":"exact"},{"name":"papillary cancer of the thyroid gland","type":"exact"},{"name":"papillary cancer of thyroid","type":"exact"},{"name":"papillary cancer of thyroid gland","type":"exact"},{"name":"papillary carcinoma of the thyroid","type":"exact"},{"name":"papillary carcinoma of the thyroid gland","type":"exact"},{"name":"papillary carcinoma of thyroid","type":"exact"},{"name":"papillary carcinoma of thyroid gland","type":"exact"},{"name":"papillary thyroid cancer","type":"exact"},{"name":"papillary thyroid carcinoma","type":"exact"},{"name":"papillary thyroid gland carcinoma","type":"exact"},{"name":"thyroid gland papillary cancer","type":"exact"},{"name":"thyroid gland papillary carcinoma","type":"exact"},{"name":"thyroid papillary carcinoma","type":"exact"}],"termid":"MONDO:0005075","xrefs":{"Monarch":{"xref_id":"0005075"}}}


id: PBO:0028818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_replication_forks_during_cellular_response_to_hydroxyurea","termid":"PBO:0028818"}


id: PBO:0078276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-4","termid":"PBO:0078276"}


id: PBO:0053576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 597","termid":"PBO:0053576"}


id: PBO:0116745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 related chromatin remodeling ATPase 5","termid":"PBO:0116745"}


id: GO:0031019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An mRNA editing complex found in the mitochondrion. The best characterized example is that of Trypanosoma brucei, which catalyzes the insertion and deletion of uridylates.","definition_xrefs":["GOC:mah","PMID:12139607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA editing complex","termid":"GO:0045293"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial mRNA editing complex","synonyms":[{"name":"mitochondrial editosome","type":"exact"}],"termid":"GO:0031019"}


id: PR:P17610
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.03","synonyms":[{"name":"RAB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypt3","type":"exact"}],"termid":"PR:P17610"}


id: PBO:0068574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 25, pseudogene","termid":"PBO:0068574"}


id: GO:0007516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hemocyte over time, from its formation to the mature structure. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte development","synonyms":[{"name":"arthropod blood cell development","type":"exact"}],"termid":"GO:0007516"}


id: PBO:0050586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HS6ST2 antisense RNA 1","termid":"PBO:0050586"}


id: GO:0090496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of mesenchymal tissue that contributes to the formation of a limb bud.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme migration","termid":"GO:0090131"},{"relation_name":"part_of","term_name":"limb bud formation","termid":"GO:0060174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme migration involved in limb bud formation","termid":"GO:0090496"}


id: PBO:0078109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator of GLUT4 (SLC2A4) 1","termid":"PBO:0078109"}


id: PBO:0091815
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF Eight-Six-Six","termid":"PBO:0091815"}


id: PBO:0029850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_telomeric_heterochromatin_during_vegetative_growth","termid":"PBO:0029850"}


id: GO:0008950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete p-aminobenzoate synthetase (obsolete GO:0008950)","synonyms":[{"name":"p-aminobenzoate synthetase","type":"exact"}],"termid":"GO:0008950"}


id: GO:0070947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a fungal cell by a neutrophil.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"},{"relation_name":"part_of","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of fungus","synonyms":[{"name":"neutrophil mediated killing of fungus","type":"exact"}],"termid":"GO:0070947"}


id: PBO:0066176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor like 2","termid":"PBO:0066176"}


id: MONDO:0001486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Vogt-Koyanagi-Harada disease (obsolete MONDO:0001486)","termid":"MONDO:0001486","xrefs":{"Monarch":{"xref_id":"0001486"}}}


id: GO:1990006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic membrane-bounded vesicle first described in dendrites, categorized by smooth membranes, electron-lucent interiors and irregular shapes. Sometimes occurs in clumps. Amorphous vesicles have been found to contain material taken up from the extracellular space, therefore suggesting that they may be part of the endosomal pathway.","definition_xrefs":["NIF_Subcellular:sao1531915298","PMID:11896161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amorphous vesicle","termid":"GO:1990006"}


id: PBO:0065861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB18, member RAS oncogene family","termid":"PBO:0065861"}


id: GO:1990315
data:
  {"annotated_genes":["SJAG_03828","SJAG_00318","SJAG_03384","SJAG_06622","SJAG_04777","SJAG_06621","SJAG_02135","SJAG_02945","SJAG_03903","SJAG_00027","SJAG_02342"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87856,101221,109242,109243,109244,109245,109246,109247,109248,110668,112809],"is_not":false,"summary":null,"term":"GO:1990315"}]},"cv_name":"cellular_component","definition":"A protein complex that consists of a phospho relay component and a MAPK cascade component. The complex is involved in signaling oxidative stress and osmostress.","definition_xrefs":["PMID:24255738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_02135":null,"SJAG_02342":null,"SJAG_02945":null,"SJAG_03384":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04777":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Mcs4 RR-MAPKKK complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990315","terms_by_termid":{"GO:1990315":null}}


id: PBO:0110348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENATAC pseudogene 1","termid":"PBO:0110348"}


id: PBO:0116591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 6 (gene/pseudogene)","termid":"PBO:0116591"}


id: PBO:0024806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enabled_by","termid":"PBO:0024806"}


id: GO:0021831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of individual interneuron precursors during the embryonic development of the olfactory bulb.","definition_xrefs":["PMID:12626695","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-independent telencephalic tangential interneuron migration","termid":"GO:0021843"},{"relation_name":"is_a","term_name":"tangential migration from the subventricular zone to the olfactory bulb","termid":"GO:0022028"},{"relation_name":"part_of","term_name":"olfactory bulb interneuron development","termid":"GO:0021891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic olfactory bulb interneuron precursor migration","termid":"GO:0021831"}


id: GO:0008900
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112682],"is_not":false,"summary":null,"term":"GO:0008900"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) + K+(out) = ADP + phosphate + H+(out) + K+(in).","definition_xrefs":["RHEA:22044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type proton-exporting transporter activity","termid":"GO:0008553"},{"relation_name":"is_a","term_name":"P-type potassium transmembrane transporter activity","termid":"GO:0008556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type potassium:proton transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005390","Reactome:R-HSA-937311","Reactome:R-HSA-9727198","MetaCyc:3.6.3.10-RXN","EC:7.2.2.19"],"synonyms":[{"name":"(K+ + H+)-ATPase activity","type":"related"},{"name":"ATP phosphohydrolase (H+/K+-exchanging)","type":"related"},{"name":"H+-K+-ATPase activity","type":"related"},{"name":"H+/K(+)-ATPase activity","type":"related"},{"name":"H+/K(+)-exchanging ATPase activity","type":"related"},{"name":"H+/K+-ATPase activity","type":"related"},{"name":"H+/K+-exchanging ATPase activity","type":"related"},{"name":"H,K-ATPase activity","type":"related"},{"name":"gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"gastric H+/K+ ATPase","type":"narrow"},{"name":"hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"potassium:proton exchanging ATPase activity","type":"related"},{"name":"proton pump activity","type":"broad"}],"termid":"GO:0008900","terms_by_termid":{"GO:0008900":null}}


id: PBO:0029569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_vegetative_cell_population_(obsolete_FYPO:0002152)","termid":"PBO:0029569"}


id: PBO:0052140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 7","termid":"PBO:0052140"}


id: GO:0031610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits of the regulatory particle that directly associate with the core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, base subcomplex","termid":"GO:0008540"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome regulatory particle","termid":"GO:0031598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear proteasome regulatory particle, base subcomplex","termid":"GO:0031610"}


id: MONDO:0014635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the RBP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 10","secondary_identifiers":["MEDGEN:909133","GARD:16110","UMLS:C4225330","OMIM:616428"],"synonyms":[{"name":"MCOPCB10","type":"related"},{"name":"RBP4 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"microphthalmia, isolated, with coloboma 10","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in RBP4","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 10","type":"exact"}],"termid":"MONDO:0014635","xrefs":{"Monarch":{"xref_id":"0014635"}}}


id: GO:1903746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nematode pharyngeal pumping.","definition_xrefs":["PMID:25329901","GOC:kmv","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode pharyngeal pumping","termid":"GO:0043051"},{"relation_name":"is_a","term_name":"positive regulation of eating behavior","termid":"GO:1904000"},{"relation_name":"positively_regulates","term_name":"nematode pharyngeal pumping","termid":"GO:0043050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode pharyngeal pumping","synonyms":[{"name":"activation of pharyngeal pumping","type":"narrow"},{"name":"activation of pumping behavior","type":"related"},{"name":"positive regulation of pumping behavior","type":"related"},{"name":"up regulation of pharyngeal pumping","type":"exact"},{"name":"up regulation of pumping behavior","type":"related"},{"name":"up-regulation of pharyngeal pumping","type":"exact"},{"name":"up-regulation of pumping behavior","type":"related"},{"name":"upregulation of pharyngeal pumping","type":"exact"},{"name":"upregulation of pumping behavior","type":"related"}],"termid":"GO:1903746"}


id: PBO:0038704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin alpha cardiac muscle 1","termid":"PBO:0038704"}


id: GO:0120285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of tyrosine.","definition_xrefs":["GOC:krc","PMID:31498992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid sensor activity","termid":"GO:0140785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0003674","GO:0140299","GO:0098772"],"is_obsolete":false,"name":"tyrosine sensor activity","synonyms":[{"name":"tyrosine sensing activity","type":"exact"}],"termid":"GO:0120285"}


id: PR:Q9P7C0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-interacting protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR19865:SF0","OMA:SCHPO01388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C2E1P5.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.05","secondary_identifiers":["UniProtKB:Q9P7C0"],"synonyms":[{"name":"Spom972h-RRP9","type":"exact"}],"termid":"PR:Q9P7C0"}


id: PBO:0090173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K37 methyltransferase Set7","termid":"PBO:0090173"}


id: PBO:0073021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short coiled-coil protein pseudogene 1","termid":"PBO:0073021"}


id: PBO:0073495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small G protein signaling modulator 1","termid":"PBO:0073495"}


id: PBO:0073534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like, endophilin B2","termid":"PBO:0073534"}


id: GO:0106003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in modulation of signaling and synaptic function in the brain, predominantly in the cerebral cortex and hippocampus. Forms dimers and multimers of amyloid beta peptide 40 and peptide 42 (proteolytic cleavage products of amyloid beta A4 protein, also known as amyloid beta precursor protein). Mostly found in the extracellular space with a proportion occurring as membrane-bound species. Influences synaptic plasticity through various receptors, mediates dendritic spine loss leading to decreased synapse density, inhibits long-term potentiation (LTP) and enhances long-term depression (LTD). Soluble multimeric form is the main pathogenic species linked to Alzheimer's disease.","definition_xrefs":["PMID:18568035","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"amyloid-beta complex","synonyms":[{"name":"ADDL complex","type":"narrow"},{"name":"Abeta complex","type":"exact"},{"name":"Abeta-derived diffusible ligand complex","type":"narrow"},{"name":"amyloid beta complex","type":"exact"},{"name":"amyloid beta dimer","type":"narrow"},{"name":"amyloid beta heterodimer","type":"narrow"},{"name":"amyloid beta heterooligomer","type":"narrow"},{"name":"amyloid beta heterotrimer","type":"narrow"},{"name":"amyloid beta homodimer","type":"narrow"},{"name":"amyloid beta homooligomer","type":"narrow"},{"name":"amyloid beta homotrimer","type":"narrow"},{"name":"amyloid beta oligomer","type":"narrow"},{"name":"amyloid beta trimer","type":"narrow"},{"name":"amyloid-beta protein 40 complex","type":"narrow"},{"name":"amyloid-beta protein 40/42 complex","type":"narrow"},{"name":"amyloid-beta protein 42 complex","type":"narrow"},{"name":"beta amyloid complex","type":"exact"},{"name":"beta-amyloid complex","type":"exact"},{"name":"betaA complex","type":"exact"},{"name":"heterodimer of amyloid beta protein","type":"narrow"},{"name":"heterooligomer of amyloid beta protein","type":"narrow"},{"name":"heterotrimer of amyloid beta protein","type":"narrow"},{"name":"homodimer of amyloid beta protein","type":"narrow"},{"name":"homooligomer of amyloid beta protein","type":"narrow"},{"name":"homotrimer of amyloid beta protein","type":"narrow"}],"termid":"GO:0106003"}


id: MONDO:0012107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropathy, hereditary sensory and autonomic, adult-onset, with anosmia","secondary_identifiers":["UMLS:C1837492","OMIM:608720","MEDGEN:324809","MESH:C563870"],"synonyms":[{"name":"neuropathy, hereditary sensory and autonomic, adult-onset, with anosmia","type":"exact"}],"termid":"MONDO:0012107","xrefs":{"Monarch":{"xref_id":"0012107"}}}


id: GO:0030447
data:
  {"annotated_genes":["SJAG_04312","SJAG_01181","SJAG_00124","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74722,76466],"is_not":false,"summary":null,"term":"GO:0030447"},{"annotations":[119554,119555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030448"}]},"cv_name":"biological_process","definition":"The process in which a multicellular organism, a unicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["GOC:mcc","PMID:11729141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth","references_by_uniquename":{"GO_REF:0000033":null,"PMID:34427722":null},"termid":"GO:0030447","terms_by_termid":{"GO:0030447":null,"GO:0030448":null}}


id: PBO:0003039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Abc3, unknown specificity","termid":"PBO:0003039"}


id: PBO:0091218
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial gene product adjacent to sequence gap, N-term truncated","termid":"PBO:0091218"}


id: PBO:0059250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L19","termid":"PBO:0059250"}


id: PBO:0064582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member C","termid":"PBO:0064582"}


id: GO:0016199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition of molecules at the central nervous system midline choice point by an axon growth cone; this choice point determines whether the growth cone will cross the midline.","definition_xrefs":["PMID:11376484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon choice point recognition","termid":"GO:0016198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon midline choice point recognition","termid":"GO:0016199"}


id: GO:0160208
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Golgi-derived organelle that forms in primary spermatocytes during spermatogenesis of some nematodes including C. elegans. This 'double organelle' consists of a fibrous body containing major sperm protein and a membranous organelle that envelops the developing fibrous body.","definition_xrefs":["PMID:18050478","PMID:8004009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fibrous body-membranous organelle","synonyms":[{"name":"FB-MO","type":"exact"}],"termid":"GO:0160208"}


id: PR:O74964
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.03","synonyms":[{"name":"RSC complex subunit rsc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc1","type":"exact"},{"name":"remodel the structure of chromatin complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74964"}


id: PBO:0088553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp1","termid":"PBO:0088553"}


id: FYPO:0006884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is thicker than normal during mitotic metaphase.","definition_xrefs":["PMID:30463883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0000120","FYPO:0001985","FYPO:0000002","FYPO:0002399"],"is_obsolete":false,"name":"thick mitotic spindle during mitotic metaphase","synonyms":[{"name":"increased mitotic spindle thickness during mitotic metaphase","type":"exact"},{"name":"thick mitotic spindle during mitotic metaphase during vegetative growth","type":"exact"},{"name":"thick spindle during mitotic metaphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006884"}


id: FYPO:0002856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal glutathione synthase activity","synonyms":[{"name":"abnormal GSH synthase activity","type":"exact"},{"name":"abnormal glutathione synthetase activity","type":"exact"}],"termid":"FYPO:0002856"}


id: PBO:0039139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apical junction component 1 homolog","termid":"PBO:0039139"}


id: PBO:0072419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 24","termid":"PBO:0072419"}


id: GO:0097674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is YLR352W in S. cerevisiae.","definition_xrefs":["GOC:vw","PMID:19882662","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-YLR352W ubiquitin ligase complex","termid":"GO:0097674"}


id: GO:0048639
data:
  {"annotated_genes":["SJAG_02392","SJAG_03581","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94901,96169,90187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of developmental growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of growth","termid":"GO:0045927"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of developmental growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of developmental growth","type":"narrow"},{"name":"stimulation of developmental growth","type":"narrow"},{"name":"up regulation of developmental growth","type":"exact"},{"name":"up-regulation of developmental growth","type":"exact"},{"name":"upregulation of developmental growth","type":"exact"}],"termid":"GO:0048639","terms_by_termid":{"GO:0051519":null}}


id: PR:P04689
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atb2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P04689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha-2 chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.05c","synonyms":[{"name":"Spom972h-atb2","type":"exact"}],"termid":"PR:P04689"}


id: PBO:0086346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; expression is regulated by levels of 5,10-methylene-THF in the cytoplasm","termid":"PBO:0086346"}


id: MOD:01899
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-arginine residue and an L-cysteine residue to form arginine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:21950656","PubMed:21568297","RESID:AA0570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-arginine residue","termid":"MOD:02041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-arginine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-4-([diaminomethylidene]amino)butyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Arg-Cys)","type":"exact"},{"name":"L-arginine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01899"}


id: PBO:0060424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAALADL2 antisense RNA 3","termid":"PBO:0060424"}


id: PBO:0113752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase (predicted by Pfam-N)","termid":"PBO:0113752"}


id: MONDO:0000681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to recognize or identify objects by touch alone.","definition_xrefs":["DOID:0060151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tactile agnosia","termid":"MONDO:0000681","xrefs":{"Monarch":{"xref_id":"0000681"}}}


id: FYPO:0007096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is decreased.","definition_xrefs":["PomBase:mah","PMID:31495586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin fusion focus","termid":"FYPO:0006503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to actin fusion focus","synonyms":[{"name":"decreased protein localisation to actin fusion focus","type":"exact"},{"name":"reduced protein localization to actin fusion focus","type":"exact"}],"termid":"FYPO:0007096"}


id: MONDO:0017813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebrofacioarticular syndrome is a rare multiple congenital anomalies syndrome characterized by mild to severe intellectual disability, a distinctive facial gestalt (blepharophimosis, maxillary hypoplasia, telecanthus, microtia and atresia of the external auditory meatus) as well as skeletal and articular abnormalities (e.g. camptodactyly of the fingers, cutaneous syndactyly, talipes equinovarus, flexion contractures of the proximal interphalangeal joints, hip or elbow subluxation, joint laxity). Affected individuals also present neonatal hypotonia, variable respiratory manifestations, chronic feeding difficulties and gray matter heterotopia.","definition_xrefs":["Orphanet:314679"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van Maldergem syndrome","secondary_identifiers":["OMIMPS:601390","GARD:5456","MEDGEN:318616","DOID:0060238","UMLS:C1832390"],"synonyms":[{"name":"Van Maldergem Wetzburger Verloes syndrome","type":"related"},{"name":"Van Maldergem syndrome","type":"exact"},{"name":"cerebro-facio-articular syndrome","type":"exact"},{"name":"cerebro-facio-articular syndrome of Van Maldergem","type":"related"}],"termid":"MONDO:0017813","xrefs":{"Monarch":{"xref_id":"0017813"}}}


id: GO:0097642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any member of the calcitonin family (e.g. adrenomedullin, adrenomedullin 2 (intermedin), amylin, calcitonin and calcitonin gene-related peptides (CGRPs)) to initiate a change in cell activity.","definition_xrefs":["PMID:10871296","PMID:12037140","PMID:18687416","GOC:bhm","InterPro:IPR003287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"calcitonin family receptor activity","termid":"GO:0097642"}


id: PBO:0057911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3614","termid":"PBO:0057911"}


id: GO:0045889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of homeotic genes of the Polycomb group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription of homeotic gene (Polycomb group) (obsolete GO:0045889)","synonyms":[{"name":"positive regulation of transcription of homeotic gene (Polycomb group)","type":"exact"}],"termid":"GO:0045889"}


id: GO:0140007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that regulates the TORC1 signaling pathway in response to nutrients. The KICSTOR complex is composed of KPTN, ITFG2, C12orf66 and SZT2.","definition_xrefs":["PMID:28199306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"KICSTOR complex","termid":"GO:0140007"}


id: PBO:0114434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine sensor upstream of mTORC1","termid":"PBO:0114434"}


id: PBO:0082878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cu(+2)-transporting P-type ATPase; required for export of copper from the cytosol into an extracytosolic compartment; similar to human proteins involved in Menkes and Wilsons diseases; protein abundance increases in response to DNA replication stress; affects TBSV model (+)RNA virus replication by regulating copper metabolism; human homologs ATP7A and ATP7B both complement yeast null mutant","termid":"PBO:0082878"}


id: PBO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Rhp57 independently of Swi5","termid":"PBO:0001683"}


id: FYPO:0000505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of necrotic cell death is increased. Necrotic cell death is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents.","definition_xrefs":["PomBase:mah","GO:0070265"],"gene_count":0,"genotype_count":0,"name":"obsolete increased necrotic cell death (obsolete FYPO:0000505)","synonyms":[{"name":"necrotic cell death: increased","type":"related"}],"termid":"FYPO:0000505"}


id: MONDO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gestational choriocarcinoma (obsolete MONDO:0002180)","termid":"MONDO:0002180","xrefs":{"Monarch":{"xref_id":"0002180"}}}


id: PR:O43038
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps36 gene.","definition_xrefs":["UniProtKB:O43038","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein-sorting-associated protein 36 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.09","synonyms":[{"name":"Spom972h-vps36","type":"exact"}],"termid":"PR:O43038"}


id: GO:0018414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of nickel into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nickel incorporation into metallo-sulfur cluster","synonyms":[{"name":"nickel incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018414"}


id: PBO:0057358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ab","termid":"PBO:0057358"}


id: GO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction","termid":"GO:0002507"}


id: MONDO:0001755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vaginal carcinosarcoma (obsolete MONDO:0001755)","termid":"MONDO:0001755","xrefs":{"Monarch":{"xref_id":"0001755"}}}


id: PBO:0064055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 89","termid":"PBO:0064055"}


id: PBO:0028638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiotic_spindle_absent_from_cell_during_meiosis_II","termid":"PBO:0028638"}


id: PBO:0066711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 8","termid":"PBO:0066711"}


id: PR:Q01475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein SAR1b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small COPII coat GTPase sar1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.06c","secondary_identifiers":["UniProtKB:Q01475"],"synonyms":[{"name":"SPBC31F10.06c","type":"related"},{"name":"Spom972h-SAR1B","type":"exact"}],"termid":"PR:Q01475"}


id: PBO:0075579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 2","termid":"PBO:0075579"}


id: GO:0007209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by tachykinin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"tachykinin receptor signaling pathway","termid":"GO:0007217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating tachykinin receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by tachykinin receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by tachykinin receptor signalling pathway","type":"related"},{"name":"tachykinin receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0007209"}


id: MONDO:0041154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of neck of urinary bladder","secondary_identifiers":["MEDGEN:588557","SCTID:236644005","UMLS:C0403653"],"synonyms":[{"name":"functional disorder of bladder neck and sphincter mechanism","type":"exact"}],"termid":"MONDO:0041154","xrefs":{"Monarch":{"xref_id":"0041154"}}}


id: PBO:0086555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGR039W is not an essential gene","termid":"PBO:0086555"}


id: MONDO:0021534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the rectum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C5547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neuroendocrine tumor G1","termid":"MONDO:0006162"},{"relation_name":"is_a","term_name":"rectal neuroendocrine tumor","termid":"MONDO:0015068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal neuroendocrine tumor G1","secondary_identifiers":["SCTID:713306000","MEDGEN:233389","UMLS:C1335678"],"synonyms":[{"name":"carcinoid of rectum","type":"exact"},{"name":"carcinoid of the rectum","type":"exact"},{"name":"carcinoid tumor of rectum","type":"exact"},{"name":"carcinoid tumor of the rectum","type":"exact"},{"name":"carcinoid tumour of rectum","type":"exact"},{"name":"carcinoid tumour of the rectum","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of rectum","type":"exact"},{"name":"rectal NET G1","type":"exact"},{"name":"rectal carcinoid","type":"exact"},{"name":"rectal carcinoid tumor","type":"exact"},{"name":"rectal carcinoid tumour","type":"exact"},{"name":"rectal neuroendocrine tumor G1","type":"exact"},{"name":"rectum NET G1","type":"exact"},{"name":"rectum carcinoid tumor","type":"exact"},{"name":"rectum carcinoid tumor (disease)","type":"exact"},{"name":"rectum carcinoid tumour","type":"exact"},{"name":"rectum carcinoid tumour (disease)","type":"exact"},{"name":"rectum neuroendocrine neoplasm G1","type":"exact"},{"name":"rectum neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0021534","xrefs":{"Monarch":{"xref_id":"0021534"}}}


id: MOD:00248
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form L-phenylalanine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","RESID:AA0243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-phenylalanine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Phe-Cys)","type":"exact"},{"name":"L-phenylalanine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00248"}


id: GO:0099106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of a channel via direct interaction with it. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"},{"relation_name":"regulates","term_name":"monoatomic ion channel activity","termid":"GO:0005216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0098772","GO:0005215"],"is_obsolete":false,"name":"ion channel regulator activity","termid":"GO:0099106"}


id: FYPO:0003080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished genetic imprinting at mating-type locus","synonyms":[{"name":"abolished genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"genetic imprinting at mating-type locus abolished","type":"exact"},{"name":"genetic imprinting at mating-type locus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003080"}


id: PBO:0031875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Hua1","termid":"PBO:0031875"}


id: _global:added_by
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a gene product that adds the modification.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"added_by","termid":"_global:added_by"}


id: PBO:0055691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver cell viability associated lncRNA","termid":"PBO:0055691"}


id: PBO:0045747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBNA1 binding protein 2","termid":"PBO:0045747"}


id: GO:0005979
data:
  {"annotated_genes":["SJAG_00963","SJAG_01376"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77507,79182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of glycogen metabolic process","termid":"GO:0070873"},{"relation_name":"regulates","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00963":null,"SJAG_01376":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glycogen biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of glycogen anabolism","type":"exact"},{"name":"regulation of glycogen biosynthesis","type":"exact"},{"name":"regulation of glycogen formation","type":"exact"},{"name":"regulation of glycogen synthesis","type":"exact"}],"termid":"GO:0005979","terms_by_termid":{"GO:0045719":null}}


id: PBO:0047454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and double SH3 domains 1","termid":"PBO:0047454"}


id: GO:0140575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Oxidation of monodehydroascorbate outside of a membrane coupled to the reduction of L-ascorbate to monodehydro-L-ascorbate radical on the inner side of a membrane. Electrons get transferred across the membrane during the reaction.","definition_xrefs":["PMID:1623014","RHEA:66524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"transmembrane monodehydroascorbate reductase activity","termid":"GO:0140575"}


id: MONDO:0008134
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86095],"is_not":false,"summary":null,"term":"MONDO:0008134"}]},"cv_name":"mondo","definition":"One of the most common forms of hereditary optic neuropathy characterized by progressive bilateral visual loss during the first decade of life, associated with optic disk pallor, visual field and color vision defects.","definition_xrefs":["Orphanet:98673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy","termid":"MONDO:0020250"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559","MONDO:0004069","MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant optic atrophy, classic form","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0338508","OMIM:165500","DOID:0111441","MEDGEN:137902","SCTID:717336005","GARD:9890"],"synonyms":[{"name":"Kjer optic atrophy","type":"exact"},{"name":"Kjer-type optic atrophy","type":"related"},{"name":"OAK","type":"related"},{"name":"OPA1","type":"related"},{"name":"autosomal dominant optic atrophy, Kjer type","type":"exact"},{"name":"optic atrophy 1","type":"related"},{"name":"optic atrophy type 1","type":"exact"},{"name":"optic atrophy, Kjer type","type":"related"},{"name":"optic atrophy, juvenile","type":"related"}],"termid":"MONDO:0008134","terms_by_termid":{"MONDO:0008134":null},"xrefs":{"Monarch":{"xref_id":"0008134"}}}


id: PBO:0056811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 4B pseudogene 1","termid":"PBO:0056811"}


id: MONDO:1011564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroaxonal dystrophy that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroaxonal dystrophy, non-human animal","termid":"MONDO:1011444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy, rabbit","secondary_identifiers":["OMIA:000715-9986"],"termid":"MONDO:1011564","xrefs":{"Monarch":{"xref_id":"1011564"}}}


id: GO:1905960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)pentan-1-one stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","GOC:rjd","PMID:19684855","PMID:3355503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to differentiation-inducing factor 2","synonyms":[{"name":"response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)pentan-1-one","type":"exact"},{"name":"response to DIF-2","type":"related"},{"name":"response to DIF2","type":"related"}],"termid":"GO:1905960"}


id: PBO:0089549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, Vid27 family, conserved in fungi and plants","termid":"PBO:0089549"}


id: GO:0043654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell interprets signals (in the form of specific proteins and lipids) on the surface of a dying cell which it will engulf and remove by phagocytosis.","definition_xrefs":["GOC:rk","PMID:15536015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytosis, recognition","termid":"GO:0006910"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"recognition of apoptotic cell","synonyms":[{"name":"detection of apoptotic cell","type":"exact"},{"name":"detection of apoptotic cell corpse","type":"exact"},{"name":"detection of cell corpse","type":"exact"},{"name":"recognition of apoptotic cell corpse","type":"exact"},{"name":"recognition of cell corpse","type":"exact"}],"termid":"GO:0043654"}


id: PBO:0081289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 72B, pseudogene","termid":"PBO:0081289"}


id: GO:0048691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of axon extension involved in regeneration.","definition_xrefs":["GOC:jid","GOC:lm","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon extension","termid":"GO:0045773"},{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of axon extension involved in regeneration","termid":"GO:0048690"},{"relation_name":"positively_regulates","term_name":"axon extension involved in regeneration","termid":"GO:0048677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon extension involved in regeneration","synonyms":[{"name":"activation of axon extension involved in regeneration","type":"narrow"},{"name":"stimulation of axon extension involved in regeneration","type":"narrow"},{"name":"up regulation of axon extension involved in regeneration","type":"exact"},{"name":"up-regulation of axon extension involved in regeneration","type":"exact"},{"name":"upregulation of axon extension involved in regeneration","type":"exact"}],"termid":"GO:0048691"}


id: GO:0031837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a substance K receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurokinin receptor binding","termid":"GO:0031834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"substance K receptor binding","synonyms":[{"name":"neurokinin-A receptor binding","type":"exact"},{"name":"substance K receptor ligand","type":"narrow"}],"termid":"GO:0031837"}


id: PBO:0039389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha pseudogene 1","termid":"PBO:0039389"}


id: PBO:0030953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation","termid":"PBO:0030953"}


id: MONDO:0009046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fraser syndrome is a rare clinical entity including as main characteristics cryptophthalmos and syndactyly.","definition_xrefs":["Orphanet:2052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"cryptophthalmia","termid":"MONDO:0020153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"Fraser syndrome","secondary_identifiers":["MEDGEN:82692","DOID:0090001","MESH:D058497","icd11.foundation:968262849","NORD:1160","NCIT:C118436","OMIMPS:219000","SCTID:204102004","UMLS:C0265233","GARD:6465"],"synonyms":[{"name":"Fraser syndrome","type":"exact"},{"name":"Fraser-Francois syndrome","type":"related"},{"name":"Meyer-Schwickerath's syndrome","type":"related"},{"name":"Ulrich-Feichtiger syndrome","type":"related"},{"name":"cryptophthalmos syndrome","type":"related"},{"name":"cryptophthalmos with Other malformations","type":"related"},{"name":"cryptophthalmos with other malformations","type":"exact"},{"name":"cryptophthalmos-syndactyly syndrome","type":"exact"},{"name":"cyclopism","type":"related"}],"termid":"MONDO:0009046","xrefs":{"Monarch":{"xref_id":"0009046"}}}


id: PBO:0034409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_modification_(obsolete_requires_modification)","termid":"PBO:0034409"}


id: MONDO:0005969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral encephalitis caused by the St. Louis encephalitis virus (encephalitis virus, st. louis), a flavivirus. It is transmitted to humans and other vertebrates primarily by mosquitoes of the genus culex. The primary animal vectors are wild birds and the disorder is endemic to the midwestern and southeastern United States. Infections may be limited to an influenza-like illness or present as an aseptic meningitis or encephalitis. Clinical manifestations of the encephalitic presentation may include seizures, lethargy, myoclonus, focal neurologic signs, coma, and death. (From Adams et al., Principles of Neurology, 6th ed, p750)","definition_xrefs":["MESH:D004674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"mosquito-borne viral encephalitis","termid":"MONDO:0020601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"st. Louis encephalitis","secondary_identifiers":["GARD:19041","ICD9:062.3","MEDGEN:41773","Orphanet:83484","DOID:10845","ICD10CM:A83.3","MedDRA:10041896","SCTID:417607009","UMLS:C0014060","EFO:0007495","icd11.foundation:1306878274"],"synonyms":[{"name":"Neuroinvasive St. Louis encephalitis virus infection","type":"exact"},{"name":"Saint Louis encephalitis","type":"exact"},{"name":"St. Louis encephalitis virus caused infectious encephalitis","type":"exact"},{"name":"St. Louis encephalitis virus infectious encephalitis","type":"exact"}],"termid":"MONDO:0005969","xrefs":{"Monarch":{"xref_id":"0005969"}}}


id: PBO:0055826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 1","termid":"PBO:0055826"}


id: GO:2000744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of anterior head development","termid":"GO:2000742"},{"relation_name":"positively_regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterior head development","termid":"GO:2000744"}


id: PBO:0051507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase subunit epsilon","termid":"PBO:0051507"}


id: PBO:0049556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 18","termid":"PBO:0049556"}


id: GO:0004687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myosin-light-chain = ADP + myosin-light-chain phosphate.","definition_xrefs":["EC:2.7.11.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0004672","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"myosin light chain kinase activity","secondary_identifiers":["Reactome:R-HSA-5668978","RHEA:22004","Reactome:R-HSA-445813","MetaCyc:2.7.11.18-RXN"],"synonyms":[{"name":"ATP:myosin-light-chain O-phosphotransferase","type":"broad"},{"name":"ATP:myosin-light-chain O-phosphotransferase activity","type":"related"},{"name":"MLCK","type":"related"},{"name":"MLCkase activity","type":"related"},{"name":"STK18","type":"related"},{"name":"calcium/calmodulin-dependent myosin light chain kinase activity","type":"related"},{"name":"myosin kinase activity","type":"related"},{"name":"myosin light chain protein kinase activity","type":"related"},{"name":"myosin light-chain kinase","type":"broad"},{"name":"myosin light-chain kinase (phosphorylating)","type":"related"},{"name":"myosin light-chain kinase (phosphorylating) activity","type":"related"},{"name":"myosin light-chain kinase activity","type":"related"},{"name":"myosin-light-chain kinase activity","type":"exact"},{"name":"smooth-muscle-myosin-light-chain kinase activity","type":"narrow"}],"termid":"GO:0004687"}


id: PBO:0040786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed X-linked 3","termid":"PBO:0040786"}


id: GO:1990003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: IDP + H2O = IMP + H+ + phosphate.","definition_xrefs":["PMID:22849572","PMID:20385596","RHEA:35207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"IDP phosphatase activity","secondary_identifiers":["GO:0090450","EC:3.6.1.64","Reactome:R-HSA-2509816"],"synonyms":[{"name":"IDP diphosphatase activity","type":"broad"},{"name":"IDPase activity","type":"exact"},{"name":"inosine diphosphatase activity","type":"exact"},{"name":"inosine-diphosphatase activity","type":"exact"}],"termid":"GO:1990003"}


id: GO:0007310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis of the oocyte. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte axis specification","termid":"GO:0007309"},{"relation_name":"is_a","term_name":"dorsal/ventral axis specification","termid":"GO:0009950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte dorsal/ventral axis specification","secondary_identifiers":["GO:0008072","GO:0048123"],"synonyms":[{"name":"oocyte dorsal-ventral axis specification","type":"exact"},{"name":"oocyte dorsal/ventral axis determination","type":"related"},{"name":"oocyte dorsoventral axis specification","type":"exact"}],"termid":"GO:0007310"}


id: GO:0051908
data:
  {"annotated_genes":["SJAG_01648","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97448,108076],"is_not":false,"summary":null,"term":"GO:0051908"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a double-stranded DNA molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008309"},{"relation_name":"is_a","term_name":"5'-3' DNA exonuclease activity","termid":"GO:0035312"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_01832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0004527","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"double-stranded DNA 5'-3' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.3"],"synonyms":[{"name":"double-stranded DNA 5'-3' exodeoxyribonuclease activity","type":"exact"},{"name":"double-stranded DNA specific 5'-3' exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0051908","terms_by_termid":{"GO:0051908":null}}


id: MONDO:0850199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary immunodeficiency disease that results from defeciency in the number or function of CD56+CD3− NK cell in peripheral blood.","definition_xrefs":["DOID:0080709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"NK cell deficiency","secondary_identifiers":["MEDGEN:1644714","UMLS:C4693357"],"termid":"MONDO:0850199","xrefs":{"Monarch":{"xref_id":"0850199"}}}


id: PR:Q9P6Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pct1 gene.","definition_xrefs":["UniProtKB:Q9P6Q6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-capping enzyme subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.04","synonyms":[{"name":"Spom972h-pct1","type":"exact"},{"name":"TPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA 5'-triphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide 5'-triphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6Q6"}


id: MONDO:0029465
data:
  {"annotated_genes":["SJAG_01991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85426],"is_not":false,"summary":null,"term":"MONDO:0029465"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 69","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617863","MEDGEN:1808299","UMLS:C5676896"],"synonyms":[{"name":"MRD69","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 69","type":"exact"},{"name":"mental retardation, autosomal dominant 69","type":"exact"}],"termid":"MONDO:0029465","terms_by_termid":{"MONDO:0029465":null},"xrefs":{"Monarch":{"xref_id":"0029465"}}}


id: GO:1904178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adipose tissue development.","definition_xrefs":["GO_REF:0000058","PMID:23081848","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of adipose tissue development","termid":"GO:1904177"},{"relation_name":"negatively_regulates","term_name":"adipose tissue development","termid":"GO:0060612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adipose tissue development","synonyms":[{"name":"down regulation of adipogenesis","type":"related"},{"name":"down regulation of adipose tissue development","type":"exact"},{"name":"down-regulation of adipogenesis","type":"related"},{"name":"down-regulation of adipose tissue development","type":"exact"},{"name":"downregulation of adipogenesis","type":"related"},{"name":"downregulation of adipose tissue development","type":"exact"},{"name":"inhibition of adipogenesis","type":"related"},{"name":"inhibition of adipose tissue development","type":"narrow"},{"name":"negative regulation of adipogenesis","type":"related"}],"termid":"GO:1904178"}


id: PBO:0069154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 406, pseudogene","termid":"PBO:0069154"}


id: PBO:0060449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear assembly factor 1 ribonucleoprotein","termid":"PBO:0060449"}


id: PBO:0049870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase with zinc finger 2","termid":"PBO:0049870"}


id: PBO:0049111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 173","termid":"PBO:0049111"}


id: GO:0061455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the muscle cell projection membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:tb","GOC:dos","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of muscle cell projection membrane (obsolete GO:0061455)","synonyms":[{"name":"integral to muscle cell projection membrane","type":"exact"}],"termid":"GO:0061455"}


id: _global:has_pathogen
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"host_of","termid":"_global:host_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_pathogen","secondary_identifiers":["RO:0002557"],"termid":"_global:has_pathogen"}


id: GO:1990207
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex capable of transporting positively charged hydrophobic drugs across the plasma membrane thereby involved in conferring resistance to a wide range of toxic compounds (e.g. methyl viologen, ethidium bromide and acriflavine). It is commonly found in bacteria. In E. coli it forms a homodimer.","definition_xrefs":["GOC:bhm","PMID:18024586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"EmrE multidrug transporter complex","synonyms":[{"name":"EmrE complex","type":"narrow"}],"termid":"GO:1990207"}


id: PBO:0073050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 8","termid":"PBO:0073050"}


id: PBO:0039527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 8","termid":"PBO:0039527"}


id: PBO:0088548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP complex protein","termid":"PBO:0088548"}


id: PBO:0003244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tre1 family protein, involved in vacuolar protein degradation (predicted)","termid":"PBO:0003244"}


id: GO:0097447
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The entire complement of dendrites for a neuron, consisting of each primary dendrite and all its branches.","definition_xrefs":["GOC:bc","GOC:aruk","NIF_Subcellular:sao172297168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"somatodendritic compartment","termid":"GO:0036477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic tree","termid":"GO:0097447"}


id: GO:0006900
data:
  {"annotated_genes":["SJAG_04391","SJAG_00072","SJAG_03907","SJAG_05207","SJAG_03268","SJAG_05345","SJAG_04643","SJAG_00416","SJAG_01242","SJAG_03558","SJAG_05344","SJAG_01748","SJAG_00284","SJAG_02349","SJAG_03153","SJAG_02539","SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70359,71104,74017,76618,79587],"is_not":false,"summary":null,"term":"GO:0006900"},{"annotations":[71630,118071],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[73383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090114"},{"annotations":[75143,75374,71708,76002,76824,77413,78758],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090110"},{"annotations":[77947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048194"},{"annotations":[95841],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006901"}]},"cv_name":"biological_process","definition":"The evagination of a membrane, resulting in formation of a vesicle.","definition_xrefs":["GOC:tb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00416":null,"SJAG_01242":null,"SJAG_01516":null,"SJAG_01748":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03268":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04391":null,"SJAG_04643":null,"SJAG_05207":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle budding from membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902591","GO:0006902"],"synonyms":[{"name":"membrane evagination","type":"exact"},{"name":"nonselective vesicle assembly","type":"related"},{"name":"single organism membrane budding","type":"related"},{"name":"single-organism membrane budding","type":"related"},{"name":"vesicle biosynthesis","type":"exact"},{"name":"vesicle budding","type":"related"},{"name":"vesicle formation","type":"exact"}],"termid":"GO:0006900","terms_by_termid":{"GO:0006900":null,"GO:0006901":null,"GO:0048194":null,"GO:0048205":null,"GO:0090110":null,"GO:0090114":null}}


id: PBO:0004112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit Ctu1","termid":"PBO:0004112"}


id: GO:0042113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:mgi_curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell activation","synonyms":[{"name":"B lymphocyte activation","type":"exact"},{"name":"B-cell activation","type":"exact"},{"name":"B-lymphocyte activation","type":"exact"}],"termid":"GO:0042113"}


id: PBO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human Ini1","termid":"PBO:0001576"}


id: PR:Q9USV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USV6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly factor cbp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.14","synonyms":[{"name":"Spom972h-SPBC27B12.14","type":"exact"},{"name":"cytochrome b mRNA-processing protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV6"}


id: GO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of the plasma membrane of the sperm with the outer acrosomal membrane.","definition_xrefs":["GOC:dph","PMID:3886029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"},{"relation_name":"part_of","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane fusion involved in acrosome reaction","synonyms":[{"name":"membrane fusion involved in the acrosomal reaction","type":"exact"}],"termid":"GO:0002078"}


id: GO:1904039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of export of iron ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:kom","GOC:TermGenie","PMID:15514116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of iron ion transmembrane transport","termid":"GO:0034760"},{"relation_name":"is_a","term_name":"regulation of iron export across plasma membrane","termid":"GO:1904038"},{"relation_name":"negatively_regulates","term_name":"iron ion export across plasma membrane","termid":"GO:1903988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of iron export across plasma membrane","synonyms":[{"name":"down regulation of ferrous iron export","type":"narrow"},{"name":"down regulation of iron(2+) export","type":"narrow"},{"name":"down-regulation of ferrous iron export","type":"narrow"},{"name":"down-regulation of iron(2+) export","type":"narrow"},{"name":"downregulation of ferrous iron export","type":"narrow"},{"name":"downregulation of iron(2+) export","type":"narrow"},{"name":"inhibition of ferrous iron export","type":"narrow"},{"name":"inhibition of iron(2+) export","type":"narrow"},{"name":"negative regulation of ferrous iron export","type":"narrow"},{"name":"negative regulation of iron(2+) export","type":"narrow"}],"termid":"GO:1904039"}


id: PBO:0050178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA lyase","termid":"PBO:0050178"}


id: PBO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate cleavage peptidase Icp55 (predicted)","termid":"PBO:0002589"}


id: GO:1903208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-induced neuron death.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000058","PMID:24252804"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of hydrogen peroxide-induced neuron death (obsolete GO:1903208)","synonyms":[{"name":"down regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down regulation of neuron death in response to H2O2","type":"exact"},{"name":"down regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down-regulation of neuron death in response to H2O2","type":"exact"},{"name":"down-regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"downregulation of neuron death in response to H2O2","type":"exact"},{"name":"downregulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of hydrogen peroxide-induced neuron death","type":"narrow"},{"name":"inhibition of neuron death in response to H2O2","type":"narrow"},{"name":"inhibition of neuron death in response to hydrogen peroxide","type":"narrow"},{"name":"inhibition of neuronal cell death in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of neuron death in response to H2O2","type":"exact"},{"name":"negative regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"negative regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"neuroprotection against H2O2-induced cell death","type":"related"},{"name":"neuroprotection against hydrogen peroxide","type":"related"},{"name":"protection against H2O2-induced neuron death","type":"related"},{"name":"protection against hydrogen peroxide-induced neuron death","type":"related"}],"termid":"GO:1903208"}


id: PBO:0043573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IX alpha 1 chain","termid":"PBO:0043573"}


id: PR:P41838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rae1 gene.","definition_xrefs":["UniProtKB:P41838","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)+ RNA export protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.05c","synonyms":[{"name":"Spom972h-rae1","type":"exact"}],"termid":"PR:P41838"}


id: GO:0048744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:lm","GOC:dph","GOC:mtg_muscle","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber development","termid":"GO:0048742"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle fiber development","synonyms":[{"name":"down regulation of skeletal muscle fiber development","type":"exact"},{"name":"down-regulation of skeletal muscle fiber development","type":"exact"},{"name":"downregulation of skeletal muscle fiber development","type":"exact"},{"name":"inhibition of skeletal muscle fiber development","type":"narrow"},{"name":"negative regulation of skeletal muscle fibre development","type":"exact"},{"name":"negative regulation of skeletal myofiber development","type":"exact"},{"name":"negative regulation of skeletal myofibre development","type":"exact"}],"termid":"GO:0048744"}


id: GO:0060743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell of the prostate gland to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell maturation","termid":"GO:0002070"},{"relation_name":"part_of","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell maturation involved in prostate gland development","synonyms":[{"name":"prostate gland epithelial cell development","type":"exact"}],"termid":"GO:0060743"}


id: PBO:0112593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane adaptor Erg28 protein","termid":"PBO:0112593"}


id: PBO:0003890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Gef3","termid":"PBO:0003890"}


id: MONDO:0007722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromia iridis","secondary_identifiers":["OMIM:142500","UMLS:C0423318","HP:0001100","MESH:C538115","MEDGEN:98395"],"synonyms":[{"name":"heterochromia iridis","type":"exact"},{"name":"heterochromia iridis (disease)","type":"exact"}],"termid":"MONDO:0007722","xrefs":{"Monarch":{"xref_id":"0007722"}}}


id: PBO:0112985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetylated cis-Golgi protein, homolog of human GRASP65; forms a complex with the coiled-coil protein Bug1p; required for unconventional protein secretion (UPS) of Acb1p in response to starvation; forms amyloid fibrils under heat shock; protein abundance increases in response to DNA replication stress","termid":"PBO:0112985"}


id: MONDO:0850084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic pansynostosis","secondary_identifiers":["GARD:22481","Orphanet:620212","MEDGEN:1843220","UMLS:C5680392"],"termid":"MONDO:0850084","xrefs":{"Monarch":{"xref_id":"0850084"}}}


id: GO:0018286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 3Fe-3S iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide. The three-iron three-sulfur cluster probably does not exist except as an intermediate form.","definition_xrefs":["RESID:AA0138"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide (obsolete GO:0018286)","synonyms":[{"name":"iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide","type":"exact"},{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl triiron trisulphide","type":"exact"}],"termid":"GO:0018286"}


id: GO:0015094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lead (Pb) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"lead ion transmembrane transporter activity","synonyms":[{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"related"}],"termid":"GO:0015094"}


id: MONDO:0012384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial panic disorder","termid":"MONDO:0031240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder 3","secondary_identifiers":["OMIM:609985","UMLS:C1864946","MEDGEN:400645"],"synonyms":[{"name":"Pand3","type":"related"},{"name":"panic disorder 3","type":"exact"},{"name":"panic disorder susceptibility locus, chromosome 4Q-related","type":"related"},{"name":"panic disorder type 3","type":"exact"}],"termid":"MONDO:0012384","xrefs":{"Monarch":{"xref_id":"0012384"}}}


id: GO:0015309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + cycloheximide(in) = H+(in) + cycloheximide(out).","definition_xrefs":["TC:2.A.1.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"cycloheximide transmembrane transporter activity","termid":"GO:0015243"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"cycloheximide:proton antiporter activity","synonyms":[{"name":"cycloheximide:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015309"}


id: PBO:0078779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 4-1","termid":"PBO:0078779"}


id: PBO:0057625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1199","termid":"PBO:0057625"}


id: MOD:00713
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to a methylated glutamic acid, such as L-glutamate 5-methyl ester.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated glutamic acid","synonyms":[{"name":"MeGlu","type":"exact"}],"termid":"MOD:00713"}


id: GO:0004877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C3b product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","ISBN:0781735149","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"},{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement component C3b receptor activity","termid":"GO:0004877"}


id: GO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-3 stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-3","termid":"GO:0036015"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-3","synonyms":[{"name":"cellular response to IL-3","type":"exact"}],"termid":"GO:0036016"}


id: FYPO:0002261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which N-glycan processing is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal N-glycan processing","synonyms":[{"name":"abnormal N-glycan catabolism","type":"related"},{"name":"abnormal N-glycan degradation","type":"related"},{"name":"abnormal N-glycan processing during mitotic cell cycle","type":"related"},{"name":"abnormal N-glycan processing during vegetative growth","type":"exact"},{"name":"abnormal N-linked glycoprotein maturation","type":"exact"}],"termid":"FYPO:0002261"}


id: GO:1901181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to caffeine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"cellular response to caffeine","termid":"GO:0071313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to caffeine","synonyms":[{"name":"down regulation of cellular response to caffeine","type":"exact"},{"name":"down-regulation of cellular response to caffeine","type":"exact"},{"name":"downregulation of cellular response to caffeine","type":"exact"},{"name":"inhibition of cellular response to caffeine","type":"narrow"}],"termid":"GO:1901181"}


id: MONDO:0002899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma in which the differentiating neuroblasts constitute more than five-percent of the tumor cells.","definition_xrefs":["NCIT:C42048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblastoma","termid":"MONDO:0005072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differentiating neuroblastoma","secondary_identifiers":["UMLS:C1511934","DOID:4160","MEDGEN:268734"],"synonyms":[{"name":"differentiating neuroblastoma","type":"exact"}],"termid":"MONDO:0002899","xrefs":{"Monarch":{"xref_id":"0002899"}}}


id: GO:0060141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual host cells. Syncytia are produced by viruses that are able to fuse directly at the cell surface without requiring endocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated induction of syncytium formation","secondary_identifiers":["VZ:5957"],"synonyms":[{"name":"positive regulation of syncytium formation by virus","type":"exact"},{"name":"syncytium formation induced by viral infection","type":"exact"}],"termid":"GO:0060141"}


id: GO:0015849
data:
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id: MONDO:1010808
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id: GO:0009388
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id: MONDO:0018585
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id: MONDO:0009958
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id: MOD:01669
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id: FYPO:0005327
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id: PBO:0030905
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id: MONDO:0019142
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id: FYPO:0001146
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id: GO:0034618
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id: PBO:0072740
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id: GO:0000153
data:
  {"annotated_genes":["SJAG_03841","SJAG_01051","SJAG_03345","SJAG_04384","SJAG_01709","SJAG_05274","SJAG_01134"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104284,107990,109888,117484,105137,105622,89577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex found in the cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01051":null,"SJAG_01134":null,"SJAG_01709":null,"SJAG_03345":null,"SJAG_03841":null,"SJAG_04384":null,"SJAG_05274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000153","terms_by_termid":{"GO:0000836":null}}


id: PBO:0069045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 290, pseudogene","termid":"PBO:0069045"}


id: GO:0071025
data:
  {"annotated_genes":["SJAG_03179","SJAG_00425","SJAG_03883","SJAG_04601","SJAG_04084","SJAG_01529","SJAG_03276","SJAG_01064","SJAG_01702","SJAG_02275","SJAG_03984","SJAG_00456","SJAG_03448","SJAG_04283","SJAG_04360","SJAG_04768","SJAG_01830","SJAG_04006","SJAG_02382","SJAG_04025","SJAG_03745","SJAG_04198","SJAG_04321","SJAG_00452","SJAG_02723","SJAG_01331","SJAG_02879","SJAG_02005","SJAG_02720","SJAG_01412","SJAG_00701","SJAG_02622","SJAG_01867","SJAG_00961","SJAG_01717","SJAG_04153","SJAG_04500","SJAG_01176","SJAG_04818","SJAG_01191","SJAG_01818","SJAG_03454","SJAG_04586","SJAG_05243","SJAG_04824","SJAG_01540","SJAG_03939","SJAG_01431","SJAG_01521","SJAG_16455","SJAG_00854"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62698],"is_not":false,"summary":null,"term":"GO:0071025"},{"annotations":[90109],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[118444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180036"},{"annotations":[115774,72846,89768,95287,74701,73565,89405,96236,96853,101359,93402,72053,116213,71598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071028"},{"annotations":[109563,111629,99413,118445,87809,92187,107774,91193,91117,92567,104616,109582,97050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[74926,93770,97564,70665,118446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[116659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[89162,110111,109583,115879,106636,87810,91118,95328,92689,118447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[106595,88693,71232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"},{"annotations":[70670,118448,71231,100095,103310,113086,115706,112185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"},{"annotations":[72847,78027,75412,116215,71227,71599,72054,88694,70666,97566,106794,102403,107777,115776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071035"},{"annotations":[70667,71228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[71229,70668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"},{"annotations":[90958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071027"},{"annotations":[106982],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120272"},{"annotations":[90637,95289,115871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180037"},{"annotations":[71600,107783,88699,72055,72848,116218,97572,102407,78028,115779,106798,99940,71230,70669,75413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant RNAs.","definition_xrefs":["GOC:krc","PMID:18644474","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_00452":null,"SJAG_00456":null,"SJAG_00701":null,"SJAG_00854":null,"SJAG_00961":null,"SJAG_01064":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01331":null,"SJAG_01412":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01529":null,"SJAG_01540":null,"SJAG_01702":null,"SJAG_01717":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_01867":null,"SJAG_02005":null,"SJAG_02275":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03179":null,"SJAG_03276":null,"SJAG_03448":null,"SJAG_03454":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04025":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04283":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04500":null,"SJAG_04586":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05243":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA surveillance","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA quality control","type":"exact"},{"name":"aberrant RNA catabolic process","type":"exact"}],"termid":"GO:0071025","terms_by_termid":{"GO:0033621":null,"GO:0071025":null,"GO:0071027":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071035":null,"GO:0071036":null,"GO:0071037":null,"GO:0071038":null,"GO:0071039":null,"GO:0071040":null,"GO:0120271":null,"GO:0120272":null,"GO:0180036":null,"GO:0180037":null}}


id: MONDO:0004642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the tonsillar pillar.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"oropharynx cancer","termid":"MONDO:0004608"},{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"},{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"tonsil cancer","termid":"MONDO:0006998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"tonsillar pillar cancer","secondary_identifiers":["SCTID:187675005","UMLS:C0153385","DOID:8688","ICD10CM:C09.1","ICD9:146.2","MEDGEN:509270"],"synonyms":[{"name":"malignant neoplasm of tonsillar pillar","type":"exact"},{"name":"malignant neoplasm of tonsillar pillars, posterior","type":"exact"},{"name":"malignant tumor of tonsillar pillar","type":"exact"},{"name":"malignant tumour of tonsillar pillar","type":"exact"}],"termid":"MONDO:0004642","xrefs":{"Monarch":{"xref_id":"0004642"}}}


id: GO:1904384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium phosphate stimulus.","definition_xrefs":["PMID:24625659","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium phosphate","termid":"GO:1904383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium phosphate","termid":"GO:1904384"}


id: MOD:01129
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dAdenosyl","termid":"MOD:01129"}


id: MONDO:0014991
data:
  {"annotated_genes":["SJAG_01776"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87329],"is_not":false,"summary":null,"term":"MONDO:0014991"}]},"cv_name":"mondo","definition":"Any Seckel syndrome in which the cause of the disease is a mutation in the NSMCE2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Seckel syndrome 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070008","GARD:18484","MEDGEN:934614","OMIM:617253","UMLS:C4310647"],"synonyms":[{"name":"NSMCE2 Seckel syndrome","type":"exact"},{"name":"SCKL10","type":"exact"},{"name":"Seckel syndrome 10","type":"exact"},{"name":"Seckel syndrome caused by mutation in NSMCE2","type":"exact"},{"name":"Seckel syndrome type 10","type":"exact"}],"termid":"MONDO:0014991","terms_by_termid":{"MONDO:0014991":null},"xrefs":{"Monarch":{"xref_id":"0014991"}}}


id: PBO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Fizzy Related","termid":"PBO:0018261"}


id: PBO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitric oxide oxidoreductase; flavohemoglobin that plays role in oxidative and nitrosative stress responses; protects against nitration of cellular targets and against cell growth inhibition under aerobic or anaerobic conditions; yeast flavohemoglobin Yhb1p and human homolog neuroglobin NGB protect cells against alpha-synuclein cytotoxicity and aggregate formation; protein increases in abundance, relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0085025"}


id: GO:0036069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bacteriochlorophyll, which occur in the presence of light. Bacteriochlorophylls are any of the chlorophylls of photosynthetic bacteria; they differ structurally from the chlorophylls of higher plants.","definition_xrefs":["PMID:12242396","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteriochlorophyll biosynthetic process","termid":"GO:0030494"},{"relation_name":"is_a","term_name":"light-dependent chlorophyll biosynthetic process","termid":"GO:0036067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"light-dependent bacteriochlorophyll biosynthetic process","synonyms":[{"name":"light dependent bacteriochlorophyll biosynthetic process","type":"exact"},{"name":"light-dependent bacteriochlorophyll anabolism","type":"exact"},{"name":"light-dependent bacteriochlorophyll biosynthesis","type":"exact"},{"name":"light-dependent bacteriochlorophyll formation","type":"exact"},{"name":"light-dependent bacteriochlorophyll synthesis","type":"exact"}],"termid":"GO:0036069"}


id: GO:0047615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: actinomycin + H2O = actinomycinic monolactone.","definition_xrefs":["MetaCyc:ACTINOMYCIN-LACTONASE-RXN","EC:3.1.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"actinomycin lactonase activity","synonyms":[{"name":"actinomycin lactonohydrolase activity","type":"related"}],"termid":"GO:0047615"}


id: GO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Low molecular weight (10-45 kDa) proteins that associate with intermediate filaments by lateral binding of the filaments and have the effect of creating tight macrofilament aggregates.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete type I intermediate filament associated protein (obsolete GO:0001722)","synonyms":[{"name":"type I intermediate filament associated protein","type":"exact"}],"termid":"GO:0001722"}


id: PBO:0075253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 5","termid":"PBO:0075253"}


id: PR:000027589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136.","definition_xrefs":["PomBase:MAH","PMID:11242054","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027589"}


id: FYPO:0005054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to latrunculin A is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to latrunculin A.","definition_xrefs":["PMID:15537703","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to latrunculin A","synonyms":[{"name":"normal cell cycle delay following latrunculin A exposure","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to LatA","type":"exact"},{"name":"normal cell cycle regulation during cellular response to latrunculin A during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to latrunculin A during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to latrunculin A","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to latrunculin A","type":"exact"}],"termid":"FYPO:0005054"}


id: GO:0031487
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing one or more class XVII myosin heavy chains and associated light chains.","definition_xrefs":["PMID:24443438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"myosin XVII complex","termid":"GO:0031487"}


id: GO:0060358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of L-leucine import. L-leucine import is the directed movement of leucine into a cell or organelle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of L-leucine import (obsolete GO:0060358)","synonyms":[{"name":"negative regulation of leucine import","type":"broad"}],"termid":"GO:0060358"}


id: PBO:0017751
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(4)","termid":"PBO:0017751"}


id: MONDO:0015998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated ectopia lentis (IEL) is a rare, clinically variable, eye disorder characterized by dislocation of the lens, often causing significant reduction in visual acuity.","definition_xrefs":["Orphanet:1885"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Marfan and Marfan-related disorder","termid":"MONDO:0017310"},{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated ectopia lentis","secondary_identifiers":["PMID:20141359","MESH:C536184","DOID:0111148","MEDGEN:342716","SCTID:74969002","UMLS:C1851286","MedDRA:10014145","GARD:12251","NCIT:C34566"],"synonyms":[{"name":"IEL","type":"exact"},{"name":"congenital ectopic lens","type":"related"},{"name":"ectopia lentis syndrome","type":"exact"},{"name":"familial ectopia lentis","type":"exact"},{"name":"isolated lens position anomaly","type":"exact"},{"name":"nonsyndromic lens position anomaly","type":"exact"}],"termid":"MONDO:0015998","xrefs":{"Monarch":{"xref_id":"0015998"}}}


id: PBO:0064966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 19","termid":"PBO:0064966"}


id: PBO:0070111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 25 pseudogene","termid":"PBO:0070111"}


id: GO:0071821
data:
  {"annotated_genes":["SJAG_02294","SJAG_02465","SJAG_00935"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58932,100964,117771],"is_not":false,"summary":null,"term":"GO:0071821"}]},"cv_name":"cellular_component","definition":"A protein complex contains the proteins FANCM and MHF, or their orthologs, plays an essential role in DNA remodeling, protects replication forks, and is conserved in eukaryotes.","definition_xrefs":["GOC:vw","PMID:20347428","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00935":null,"SJAG_02294":null,"SJAG_02465":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"FANCM-MHF complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0071821","terms_by_termid":{"GO:0071821":null}}


id: GO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton).","definition_xrefs":["GOC:jid","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal system development","synonyms":[{"name":"skeletal development","type":"exact"}],"termid":"GO:0001501"}


id: PBO:0036557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase Put1 (predicted)","termid":"PBO:0036557"}


id: PBO:0076274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 2","termid":"PBO:0076274"}


id: MOD:00261
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and 5'-phosphouridine through a phosphodiester bond to form O4'-(phospho-5'-uridine)-L-tyrosine.","definition_xrefs":["Unimod:417#Y","PubMed:11467524","PubMed:2885322","DeltaMass:0","RESID:AA0256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"uridylated residue","termid":"MOD:01166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-uridine)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-uridine phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"5'-uridylic-O-tyrosine","type":"exact"},{"name":"MOD_RES O-UMP-tyrosine","type":"exact"},{"name":"O-Uridinylylation (of Tyrosine)","type":"exact"},{"name":"O4'-(phospho-5'-uridine)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-uridine phosphodiester","type":"exact"},{"name":"OUMPTyr","type":"exact"},{"name":"PhosphoUridine","type":"related"},{"name":"hydrogen 5'-uridylate tyrosine ester","type":"exact"},{"name":"uridine phosphodiester","type":"related"}],"termid":"MOD:00261"}


id: PBO:0082323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in degradation of ubiquitinated substrates; contributes preferentially to ERAD; required for spindle pole body duplication; mainly nuclear localization","termid":"PBO:0082323"}


id: GO:0034576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-isopropylacetanilide + OH- = N-isopropylaniline + acetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N-isopropylacetanilide amidohydrolase activity (obsolete GO:0034576)","termid":"GO:0034576"}


id: PBO:0054942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2356","termid":"PBO:0054942"}


id: PATO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A virulence that is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"virulence","termid":"PATO:0002146"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced virulence","synonyms":[{"name":"attenuated","type":"exact"}],"termid":"PATO:0002147"}


id: PBO:0038606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 3","termid":"PBO:0038606"}


id: PBO:0069889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1178, pseudogene","termid":"PBO:0069889"}


id: PBO:0031408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pear-shaped_cell","termid":"PBO:0031408"}


id: GO:0035838
data:
  {"annotated_genes":["SJAG_02104","SJAG_01754","SJAG_01388","SJAG_02169","SJAG_02222","SJAG_00424","SJAG_03748","SJAG_03119","SJAG_03705","SJAG_03915","SJAG_02916","SJAG_02278","SJAG_04509","SJAG_04765","SJAG_01925","SJAG_04058","SJAG_03126","SJAG_04960","SJAG_03625","SJAG_02320","SJAG_01196","SJAG_00514","SJAG_02511","SJAG_03637","SJAG_01189","SJAG_02166","SJAG_04358","SJAG_03486","SJAG_05285","SJAG_00030","SJAG_01290","SJAG_02838","SJAG_04624","SJAG_03581","SJAG_03011","SJAG_00661","SJAG_04703","SJAG_04522","SJAG_04901","SJAG_00152","SJAG_02338","SJAG_04566","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75837,88785,94198,95262,95736,100081,100495,104189,112495,116890,119531,119533,119535,119537,119539,119541],"is_not":false,"summary":null,"term":"GO:0035838"},{"annotations":[119158,116804,111079,94892,116496,70552,118226,91035,112275,113372,118960,92731,116134,114479,90175,88195,91064,106423],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902716"},{"annotations":[89753,114707,97189,99641,91906,111086,116143,113105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035841"},{"annotations":[111088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035842"},{"annotations":[91907,104970,114708,113107,89082,89755,99642,103383,107926,97190,106430,114373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035840"},{"annotations":[78395],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902929"}]},"cv_name":"cellular_component","definition":"The region at either end of the longest axis of a cylindrical or elongated cell, where polarized growth occurs.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00424":null,"SJAG_00514":null,"SJAG_00661":null,"SJAG_01189":null,"SJAG_01196":null,"SJAG_01290":null,"SJAG_01388":null,"SJAG_01754":null,"SJAG_01925":null,"SJAG_02104":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02320":null,"SJAG_02338":null,"SJAG_02511":null,"SJAG_02838":null,"SJAG_02916":null,"SJAG_03011":null,"SJAG_03119":null,"SJAG_03126":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03625":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03915":null,"SJAG_04058":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04566":null,"SJAG_04624":null,"SJAG_04666":null,"SJAG_04703":null,"SJAG_04765":null,"SJAG_04901":null,"SJAG_04960":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growing cell tip","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:30726171":null},"synonyms":[{"name":"growing cell end","type":"exact"}],"termid":"GO:0035838","terms_by_termid":{"GO:0035838":null,"GO:0035840":null,"GO:0035841":null,"GO:0035842":null,"GO:1902716":null,"GO:1902929":null}}


id: PBO:0116767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPON2 antisense RNA 1","termid":"PBO:0116767"}


id: GO:0021662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 4. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 structural organization","synonyms":[{"name":"rhombomere 4 structural organisation","type":"exact"}],"termid":"GO:0021662"}


id: GO:0043266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"potassium ion transport","termid":"GO:0006813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of potassium ion transport","synonyms":[{"name":"regulation of K+ conductance","type":"narrow"},{"name":"regulation of K+ transport","type":"exact"},{"name":"regulation of potassium conductance","type":"narrow"},{"name":"regulation of potassium ion conductance","type":"narrow"},{"name":"regulation of potassium transport","type":"exact"}],"termid":"GO:0043266"}


id: PBO:0066338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC2 antisense RNA 1","termid":"PBO:0066338"}


id: MONDO:0035250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare coronary artery congenital malformation characterized by an anomalous origin and course of the right coronary artery, which originates from the left aortic sinus of Valsalva and has an abnormal proximal course, which may be intramural, prepulmonic, subpulmonic, retroaortic, retrocardiac or wrapped around the apex. Patients are frequently asymptomatic, although chest pain, dyspnea, palpitations, dizziness, syncope, and sudden cardiac arrest/death (typically following intense physical exertion) may be observed. This malformation is associated with a lower risk of sudden cardiac death therefore surgical revascularization is recommended only when signs and/or symptoms of ischemia are present. [Orphanet:541454]","definition_xrefs":["Orphanet:541454"],"gene_count":0,"genotype_count":0,"name":"obsolete anomalous aortic origin of the right coronary artery (obsolete MONDO:0035250)","secondary_identifiers":["ICD10CM:Q24.5"],"termid":"MONDO:0035250","xrefs":{"Monarch":{"xref_id":"0035250"}}}


id: MONDO:0003163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cauda equina neoplasm","termid":"MONDO:0003164"},{"relation_name":"is_a","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauda equina intradural extramedullary astrocytoma","secondary_identifiers":["DOID:4846","NCIT:C5408","UMLS:C1334254","MEDGEN:235225"],"synonyms":[{"name":"intradural extramedullary Cauda equina astrocytoma","type":"exact"},{"name":"intradural extramedullary astrocytic tumor of the Cauda equina","type":"exact"},{"name":"intradural extramedullary astrocytic tumour of the Cauda equina","type":"exact"},{"name":"intradural extramedullary astrocytoma of Cauda equina","type":"exact"},{"name":"intradural extramedullary astrocytoma of the Cauda equina","type":"exact"}],"termid":"MONDO:0003163","xrefs":{"Monarch":{"xref_id":"0003163"}}}


id: PBO:0004467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Ndc80","termid":"PBO:0004467"}


id: MONDO:0019270
data:
  {"annotated_genes":["SJAG_01356","SJAG_02488","SJAG_02885","SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[85517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012251"},{"annotations":[85971,85972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"}]},"cv_name":"mondo","definition":"An umbrella term for a group of rare genetic skin disorders characterized by well-demarcated plaques of reddened, dry and thickened skin. Typically, these lesions are distributed symmetrically on the body and tend to slowly expand and progress over time.","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01356":null,"SJAG_02488":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratoderma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:609461","UMLS:C0432330","Orphanet:79355","ICD9:757.39","SCTID:254215005","GARD:18986","MedDRA:10015280"],"termid":"MONDO:0019270","terms_by_termid":{"MONDO:0007574":null,"MONDO:0012251":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0019270"}}}


id: FYPO:0002133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA does not occur. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished protein-RNA interaction","synonyms":[{"name":"RNA binding abolished","type":"exact"},{"name":"abolished RNA binding","type":"exact"},{"name":"abolished RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002133"}


id: GO:0071540
data:
  {"annotated_genes":["SJAG_02628","SJAG_02995","SJAG_02376","SJAG_03147","SJAG_02164","SJAG_03472","SJAG_04744","SJAG_04981"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68772,75433,95114,98053,98112,99249,105930,111024],"is_not":false,"summary":null,"term":"GO:0071540"}]},"cv_name":"cellular_component","definition":"An eukaryotic translation initiation factor 3 complex that contains the PCI-domain protein eIF3e.","definition_xrefs":["PMID:15904532","PMID:19061185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 3 complex","termid":"GO:0005852"}],"gene_count":8,"genes_by_uniquename":{"SJAG_02164":null,"SJAG_02376":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex, eIF3e","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"eIF3e-containing eukaryotic translation initiation factor 3 complex","type":"exact"}],"termid":"GO:0071540","terms_by_termid":{"GO:0071540":null}}


id: GO:0035753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in sustaining the fidelity and copy number of DNA trinucleotide repeats. DNA trinucleotide repeats are naturally occurring runs of three base-pairs.","definition_xrefs":["GOC:rb","PMID:21347277","SO:0000291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"maintenance of DNA trinucleotide repeats","termid":"GO:0035753"}


id: PBO:0035835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_dimethylation_during_vegetative_growth","termid":"PBO:0035835"}


id: MONDO:0010741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any tooth agenesis in which the cause of the disease is a mutation in the EDA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, X-linked, 1","secondary_identifiers":["MESH:C567060","UMLS:C1970757","OMIM:313500","GARD:18246","MEDGEN:410143"],"synonyms":[{"name":"EDA tooth agenesis","type":"exact"},{"name":"STHAGX1","type":"related"},{"name":"hypodontia/oligodontia, X-linked, 1","type":"related"},{"name":"tooth agenesis caused by mutation in EDA","type":"exact"},{"name":"tooth agenesis, selective, X-linked 1, X-linked dominant","type":"exact"},{"name":"tooth agenesis, selective, X-linked, 1","type":"exact"},{"name":"tooth agenesis, selective, X-linked, type 1","type":"exact"}],"termid":"MONDO:0010741","xrefs":{"Monarch":{"xref_id":"0010741"}}}


id: PBO:0060055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 2","termid":"PBO:0060055"}


id: PBO:0060965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFU1 iron-sulfur cluster scaffold pseudogene 2","termid":"PBO:0060965"}


id: PBO:0031423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_population_phenotype","termid":"PBO:0031423"}


id: FYPO:0002058
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01753","name":"mdh1delta","uniquename":"SJAG_01753:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03118:allele-2":{"allele_type":"nonsense_mutation","description":"aa61->stop","gene_uniquename":"SJAG_03118","name":"frameshift","uniquename":"SJAG_03118:allele-2"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D 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id: MONDO:0009956
data:
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id: SO:0002058
data:
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id: PBO:0029705
data:
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id: PBO:0066237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 44","termid":"PBO:0066237"}


id: GO:0007425
data:
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id: MONDO:0009077
data:
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id: SO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001579 transcript_sequence_variant (obsolete SO:0001579)","synonyms":[{"name":"transcript sequence variant","type":"exact"}],"termid":"SO:0001579"}


id: PBO:0084766
data:
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id: PBO:0068844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 82, pseudogene","termid":"PBO:0068844"}


id: PBO:0070157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 71 pseudogene","termid":"PBO:0070157"}


id: PBO:0035760
data:
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id: PBO:0054400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1796","termid":"PBO:0054400"}


id: MOD:00488
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:116#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized arginine biotinylated with biotin-LC-hydrazide","synonyms":[{"name":"OxArgBiotin","type":"related"},{"name":"Oxidized arginine biotinylated with biotin-LC-hydrazide","type":"related"}],"termid":"MOD:00488"}


id: GO:0060182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the peptide apelin to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"apelin receptor activity","termid":"GO:0060182"}


id: MONDO:0013145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the KCNE3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 6","secondary_identifiers":["MESH:C567735","OMIM:613119","UMLS:C2751089","DOID:0110223","GARD:15619","MEDGEN:413473"],"synonyms":[{"name":"BRGDA6","type":"exact"},{"name":"Brugada syndrome 6","type":"exact"},{"name":"Brugada syndrome caused by mutation in KCNE3","type":"exact"},{"name":"Brugada syndrome type 6","type":"exact"},{"name":"KCNE3 Brugada syndrome","type":"exact"}],"termid":"MONDO:0013145","xrefs":{"Monarch":{"xref_id":"0013145"}}}


id: GO:2000925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"negatively_regulates","term_name":"cellodextrin metabolic process","termid":"GO:2000889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellodextrin metabolic process","synonyms":[{"name":"negative regulation of cellodextrin metabolism","type":"exact"}],"termid":"GO:2000925"}


id: GO:0035793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of metanephric mesenchymal cell migration resulting from the platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:bf","GOC:yaf","GOC:mtg_kidney_jan10","PMID:10734101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:1900238"},{"relation_name":"is_a","term_name":"positive regulation of metanephric mesenchymal cell migration","termid":"GO:2000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"positive regulation of metanephric mesenchymal cell migration by PDGF receptor-beta signaling pathway","type":"exact"},{"name":"positive regulation of metanephric mesenchymal cell migration by PDGFR-beta signaling pathway","type":"exact"},{"name":"positive regulation of metanephric mesenchymal cell migration by betaPDGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:0035793"}


id: MONDO:0032877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with nonspecific brain abnormalities and with or without seizures","secondary_identifiers":["MEDGEN:1684757","UMLS:C5231470","OMIM:618709"],"synonyms":[{"name":"NEDBAS","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH NONSPECIFIC BRAIN ABNORMALITIES AND WITH OR WITHOUT SEIZURES","type":"related"},{"name":"neurodevelopmental disorder with nonspecific brain abnormalities and with or without seizures","type":"exact"}],"termid":"MONDO:0032877","xrefs":{"Monarch":{"xref_id":"0032877"}}}


id: MONDO:0004629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"substance-induced psychosis","termid":"MONDO:0004630"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"delirium","termid":"MONDO:0045057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"subacute delirium","secondary_identifiers":["UMLS:C0154333","ICD9:293.1","MEDGEN:56340","SCTID:191507002","DOID:8645"],"termid":"MONDO:0004629","xrefs":{"Monarch":{"xref_id":"0004629"}}}


id: MONDO:0019615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland neoplasm","termid":"MONDO:0021227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary dermoid and epidermoid cysts","secondary_identifiers":["MEDGEN:1674582","Orphanet:91351","UMLS:C5190781","GARD:19161"],"termid":"MONDO:0019615","xrefs":{"Monarch":{"xref_id":"0019615"}}}


id: PBO:0057925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3650","termid":"PBO:0057925"}


id: GO:1905954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lipid localization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17564681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of lipid localization","termid":"GO:1905952"},{"relation_name":"positively_regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid localization","synonyms":[{"name":"activation of lipid localisation","type":"narrow"},{"name":"activation of lipid localization","type":"narrow"},{"name":"positive regulation of lipid localisation","type":"exact"},{"name":"up regulation of lipid localisation","type":"exact"},{"name":"up regulation of lipid localization","type":"exact"},{"name":"up-regulation of lipid localisation","type":"exact"},{"name":"up-regulation of lipid localization","type":"exact"},{"name":"upregulation of lipid localisation","type":"exact"},{"name":"upregulation of lipid localization","type":"exact"}],"termid":"GO:1905954"}


id: GO:0033687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of osteoblasts, resulting in the expansion of an osteoblast cell population. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast proliferation","termid":"GO:0033687"}


id: PR:Q9USK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USK3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C4B3.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.13","synonyms":[{"name":"Spom972h-SPCC4B3.13","type":"exact"}],"termid":"PR:Q9USK3"}


id: FYPO:0007269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere clustering is normal (i.e. indistinguishable from wild type). Telomere clustering gathers telomeres during or prior to tethering to the nuclear periphery during interphase of the mitotic cell cycle.","definition_xrefs":["GO:0120110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"},{"relation_name":"is_a","term_name":"chromosome region localization phenotype during vegetative growth","termid":"FYPO:0008381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal interphase mitotic telomere clustering during vegetative growth","synonyms":[{"name":"normal interphase mitotic telomere clustering during mitotic cell cycle","type":"related"},{"name":"normal telomere clustering during vegetative growth","type":"exact"}],"termid":"FYPO:0007269"}


id: MONDO:0002590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma","termid":"MONDO:0006456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"combined thymoma","secondary_identifiers":["MEDGEN:317530","UMLS:C1707449","DOID:3281","NCIT:C45722"],"termid":"MONDO:0002590","xrefs":{"Monarch":{"xref_id":"0002590"}}}


id: MONDO:0015275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Partial atrioventricular canal (PAVC) is a congenital heart malformation characterized by an atrial septal defect (ASD; ostium primum), clefts of mitral and occasionally tricuspid valves, two separate atrioventricular (AV) valve annuli and an intact ventricular septum. The typical symptoms of PAVC are impaired exercise capacity and exertional dyspnea.","definition_xrefs":["Orphanet:1330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrioventricular septal defect","termid":"MONDO:0020290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"partial atrioventricular canal","secondary_identifiers":["UMLS:C4023290","MEDGEN:868879","MESH:C536112","NANDO:2200268","GARD:4229","SCTID:718216009"],"synonyms":[{"name":"PAVC","type":"exact"},{"name":"partial AVSD","type":"related"},{"name":"partial atrioventricular canal defect","type":"exact"},{"name":"partial atrioventricular septal defects","type":"related"},{"name":"partial common atrioventricular canal","type":"related"}],"termid":"MONDO:0015275","xrefs":{"Monarch":{"xref_id":"0015275"}}}


id: GO:0004572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal (1->3)- and (1->6)-linked alpha-D-mannose residues in the mannosyl-oligosaccharide Man(5)(GlcNAc)(3).","definition_xrefs":["EC:3.2.1.114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyl-oligosaccharide mannosidase activity","termid":"GO:0015924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.114-RXN","Reactome:R-HSA-975814","RHEA:56052"],"synonyms":[{"name":"1,3-(1,6-)mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"related"},{"name":"GlcNAc transferase I-dependent alpha1,3[alpha1,6]mannosidase activity","type":"related"},{"name":"Golgi alpha-mannosidase II","type":"related"},{"name":"ManII activity","type":"narrow"},{"name":"alpha-(1,3/6)-mannosidase activity","type":"related"},{"name":"alpha-D-mannosidase II","type":"related"},{"name":"alpha-mannosidase II","type":"related"},{"name":"exo-1,3-1,6-alpha-mannosidase activity","type":"related"},{"name":"mannosidase II activity","type":"narrow"},{"name":"mannosyl-oligosaccharide (1->3)-(1->6)-alpha-mannosidase activity","type":"exact"},{"name":"mannosyl-oligosaccharide (1->3,6)-alpha-mannosidase activity","type":"exact"},{"name":"mannosyl-oligosaccharide (1->3/6)-alpha-mannosidase activity","type":"exact"}],"termid":"GO:0004572"}


id: SO:0001986
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature variant, where the alteration occurs upstream of the transcript TSS.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream_transcript_variant","synonyms":[{"name":"upstream transcript variant","type":"exact"}],"termid":"SO:0001986"}


id: MOD:01124
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldohexosyl lysyl","termid":"MOD:01124"}


id: SO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inversion site found on the Saccharomyces cerevisiae 2 micron plasmid.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_site","termid":"SO:0000948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRT_site","synonyms":[{"name":"FLP recombination target region","type":"exact"},{"name":"FRT site","type":"exact"}],"termid":"SO:0000350"}


id: PBO:0068468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 45, pseudogene","termid":"PBO:0068468"}


id: MONDO:0010356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrogenic syndrome of inappropriate antidiuresis (NSIAD) is a rare genetic disorder of water balance, closely resembling the far more frequent syndrome of inappropriate antidiuretic secretion (SIAD), and characterized by euvolemic hypotonic hyponatremia due to impaired free water excretion and undetectable or low plasma arginine vasopressin (AVP) levels.","definition_xrefs":["Orphanet:93606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrogenic syndrome of inappropriate antidiuresis","secondary_identifiers":["GARD:10306","DOID:0112121","SCTID:723440000","OMIM:300539","UMLS:C1845202","MESH:C564491","icd11.foundation:808905140","MEDGEN:336877"],"synonyms":[{"name":"NSIAD","type":"exact"},{"name":"nephrogenic syndrome of inappropriate antidiuresis","type":"exact"},{"name":"nephrogenic syndrome of inappropriate antidiuresis, X-linked recessive","type":"exact"}],"termid":"MONDO:0010356","xrefs":{"Monarch":{"xref_id":"0010356"}}}


id: GO:0042970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of homoserine from one side of a membrane to the other. Homoserine is alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"homoserine transmembrane transporter activity","synonyms":[{"name":"homoserine transporter activity","type":"broad"}],"termid":"GO:0042970"}


id: PBO:0048603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit 4 homolog","termid":"PBO:0048603"}


id: MONDO:0006142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small cell carcinoma arising from the cervix.","definition_xrefs":["NCIT:C7982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"cervical carcinoma","termid":"MONDO:0005131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical small cell carcinoma","secondary_identifiers":["MEDGEN:79025","ONCOTREE:SCCE","UMLS:C0279674","EFO:1000171","DOID:6740"],"synonyms":[{"name":"Cervical small cell cancer","type":"exact"},{"name":"SCCE","type":"related"},{"name":"cervical small cell carcinoma","type":"exact"},{"name":"cervix small cell carcinoma","type":"exact"},{"name":"cervix uteri small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of cervix","type":"exact"},{"name":"small cell carcinoma of cervix uteri","type":"exact"},{"name":"small cell carcinoma of the cervix","type":"exact"},{"name":"small cell carcinoma of the cervix uteri","type":"exact"},{"name":"small cell carcinoma of the uterine cervix","type":"exact"},{"name":"small cell carcinoma of uterine cervix","type":"exact"},{"name":"uterine cervix small cell carcinoma","type":"exact"}],"termid":"MONDO:0006142","xrefs":{"Monarch":{"xref_id":"0006142"}}}


id: MONDO:0700141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma occurring in a dog. It is the most common malignant tumor found in the mouths of dogs and also occurs frequently on the digits. All canine melanomas are locally invasive and malignant canine melanomas show a high rate of metastasis. Melanoma in dogs has been established as a relevant model for human melanoma.","definition_xrefs":["NCIT:C120298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma, non-human animal","termid":"MONDO:0700132"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine melanoma","termid":"MONDO:0700141","xrefs":{"Monarch":{"xref_id":"0700141"}}}


id: GO:0016263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a galactosyl residue to a non-reducing O-linked N-acetylgalactosamine residue in an O-glycan.","definition_xrefs":["EC:2.4.1.122","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-1,3-galactosyltransferase activity","termid":"GO:0048531"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1964505","RHEA:15621","Reactome:R-HSA-6785524","MetaCyc:2.4.1.122-RXN"],"synonyms":[{"name":"Core 1 GalT","type":"related"},{"name":"UDP-galactose:glycoprotein-N-acetyl-D-galactosamine 3-beta-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:glycoprotein-N-acetyl-D-galactosamine 3-beta-D-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-mucin beta-(1->3)-galactosyltransferase activity","type":"related"}],"termid":"GO:0016263"}


id: PBO:0078860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 8","termid":"PBO:0078860"}


id: PBO:0085783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the Sec1p/Munc-18 family; essential for vacuolar protein sorting; required for the function of Pep12p and the early endosome/late Golgi SNARE Tlg2p; essential for fusion of Golgi-derived vesicles with the prevacuolar compartment; mutation in human VPS45 is associated with congenital neutropenia and primary myelofibrosis of infancy","termid":"PBO:0085783"}


id: PBO:0083629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Effector of Rab GTPase Sec4p; forms a complex with Sec4p and t-SNARE Sec9p; involved in exocytosis and docking and fusion of post-Golgi vesicles with plasma membrane; regulates cell proliferation and colony development via the Rho1-Tor1 pathway; homolog of Drosophila lgl tumor suppressor; SRO7 has a paralog, SRO77, that arose from the whole genome duplication","termid":"PBO:0083629"}


id: FYPO:0003850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an oligomycin antibiotic.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on oligomycin","synonyms":[{"name":"normal cell population growth in presence of oligomycin","type":"exact"},{"name":"normal cell population growth on oligomycin","type":"exact"},{"name":"normal cellular response to oligomycin","type":"related"},{"name":"normal vegetative cell population growth on oligomycin","type":"exact"}],"termid":"FYPO:0003850"}


id: GO:0090733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A extracellular matrix complex involved in cell adhesion and cell migration. Typically homotrimeric or homohexameric. In mammals, four complexes exist: Tenascin-C, Tenascin-N (also known as Tenascin-W), Tenascin-X and Tenascin-R.","definition_xrefs":["PMID:23658023","PMID:17909022","GOC:bhm","PMID:11731446","PMID:12845616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tenascin complex","synonyms":[{"name":"Tenascin-C","type":"narrow"},{"name":"Tenascin-N","type":"narrow"},{"name":"Tenascin-R","type":"narrow"},{"name":"Tenascin-W","type":"narrow"},{"name":"Tenascin-X","type":"narrow"}],"termid":"GO:0090733"}


id: PBO:0090849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA N6-threonyl-carbamoyl-adenosine (t6A) Sua5","termid":"PBO:0090849"}


id: GO:0009888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue development","secondary_identifiers":["Wikipedia:Histogenesis"],"synonyms":[{"name":"histogenesis","type":"exact"},{"name":"histogenesis and organogenesis","type":"broad"}],"termid":"GO:0009888"}


id: MONDO:0000761
data:
  {"annotated_genes":["SJAG_01548","SJAG_02035","SJAG_04324","SJAG_00441","SJAG_03286","SJAG_02317","SJAG_01806","SJAG_00786","SJAG_04663","SJAG_00112","SJAG_01804","SJAG_03635","SJAG_03244","SJAG_03424","SJAG_02846","SJAG_01465"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86481,86482,86483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013256"},{"annotations":[86048,86047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[86595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010334"},{"annotations":[86314,86309,86313,86312,86308,86310,86311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"},{"annotations":[85955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"},{"annotations":[87455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008644"},{"annotations":[85932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","definition":"A chromosomal disorder consisting of the absence of a part of a chromosome.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00441":null,"SJAG_00786":null,"SJAG_01465":null,"SJAG_01548":null,"SJAG_01804":null,"SJAG_01806":null,"SJAG_02035":null,"SJAG_02317":null,"SJAG_02846":null,"SJAG_03244":null,"SJAG_03286":null,"SJAG_03424":null,"SJAG_03635":null,"SJAG_04324":null,"SJAG_04663":null},"genotype_count":0,"is_obsolete":false,"name":"syndrome caused by partial chromosomal deletion","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060388"],"synonyms":[{"name":"chromosomal deletion syndrome","type":"related"},{"name":"microdeletion syndrome","type":"exact"}],"termid":"MONDO:0000761","terms_by_termid":{"MONDO:0007925":null,"MONDO:0008644":null,"MONDO:0008684":null,"MONDO:0010334":null,"MONDO:0010767":null,"MONDO:0013256":null,"MONDO:0014848":null},"xrefs":{"Monarch":{"xref_id":"0000761"}}}


id: PBO:0027421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_5'-3'_exonucleolytic_mRNA_catabolic_process","termid":"PBO:0027421"}


id: PBO:0050410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPD divergent transcript","termid":"PBO:0050410"}


id: PBO:0047669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin adenine dinucleotide synthetase 1","termid":"PBO:0047669"}


id: PBO:0041134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 17","termid":"PBO:0041134"}


id: GO:1904428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tubulin deacetylation.","definition_xrefs":["GOC:TermGenie","PMID:23886946","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of tubulin deacetylation","termid":"GO:0090043"},{"relation_name":"negatively_regulates","term_name":"tubulin deacetylation","termid":"GO:0090042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tubulin deacetylation","synonyms":[{"name":"down regulation of tubulin deacetylation","type":"exact"},{"name":"down-regulation of tubulin deacetylation","type":"exact"},{"name":"downregulation of tubulin deacetylation","type":"exact"},{"name":"inhibition of tubulin deacetylation","type":"narrow"}],"termid":"GO:1904428"}


id: PR:Q10066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aru1 gene.","definition_xrefs":["UniProtKB:Q10066","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase Aru1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.07","synonyms":[{"name":"SPAC3H1.07","type":"related"},{"name":"Spom972h-aru1","type":"exact"}],"termid":"PR:Q10066"}


id: PBO:0091209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr","termid":"PBO:0091209"}


id: SO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transmissible element containing genes involved in symbiosis, analogous to the pathogenicity islands of gram negative bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiosis_island","synonyms":[{"name":"symbiosis island","type":"exact"}],"termid":"SO:0000776"}


id: PBO:0004713
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel Two Interacting protein","termid":"PBO:0004713"}


id: PBO:0069779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1064, pseudogene","termid":"PBO:0069779"}


id: PBO:0116306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein based on available experimental and comparative sequence data","termid":"PBO:0116306"}


id: PBO:0062535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 4","termid":"PBO:0062535"}


id: PBO:0004785
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by osmotic stress","termid":"PBO:0004785"}


id: MONDO:1010101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Galactosemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosemia, non-human animal","secondary_identifiers":["OMIA:001144"],"termid":"MONDO:1010101","xrefs":{"Monarch":{"xref_id":"1010101"}}}


id: PBO:0064031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 65","termid":"PBO:0064031"}


id: GO:0042349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The orientation of free radical substrates in such a way that only a particular stereoisomer is synthesized by an enzyme. Best characterized as a function during lignan biosynthesis.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"guiding stereospecific synthesis activity","synonyms":[{"name":"dirigent protein","type":"narrow"}],"termid":"GO:0042349"}


id: GO:0070075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of the aqueous layer of the tear film from the lacrimal glands. Tears are the liquid product of a process of lacrimation to clean and lubricate the eyes. Tear fluid contains water, mucin, lipids, lysozyme, lactoferrin, lipocalin, lacritin, immunoglobulins, glucose, urea, sodium, and potassium.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tear secretion","termid":"GO:0070075"}


id: GO:1905447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial ATP synthesis coupled electron transport.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:23707074","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidative phosphorylation","termid":"GO:0090324"},{"relation_name":"is_a","term_name":"regulation of mitochondrial ATP synthesis coupled electron transport","termid":"GO:1905446"},{"relation_name":"negatively_regulates","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial ATP synthesis coupled electron transport","synonyms":[{"name":"down regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"down-regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"downregulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"inhibition of mitochondrial ATP synthesis coupled electron transport","type":"narrow"}],"termid":"GO:1905447"}


id: PBO:0038619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline ceramidase 1","termid":"PBO:0038619"}


id: GO:1901872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecgonone methyl ester.","definition_xrefs":["GOC:TermGenie","PMID:22665766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"ecgonone methyl ester metabolic process","termid":"GO:1901870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ecgonone methyl ester biosynthetic process","synonyms":[{"name":"ecgonone methyl ester anabolism","type":"exact"},{"name":"ecgonone methyl ester biosynthesis","type":"exact"},{"name":"ecgonone methyl ester formation","type":"exact"},{"name":"ecgonone methyl ester synthesis","type":"exact"}],"termid":"GO:1901872"}


id: MONDO:0014832
data:
  {"annotated_genes":["SJAG_02523"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85931],"is_not":false,"summary":null,"term":"MONDO:0014832"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02523":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0024322","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 53","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17897","Orphanet:488635","OMIM:616917","UMLS:C4310794","MEDGEN:934761","MONDO:0024253"],"synonyms":[{"name":"GPIBD13","type":"exact"},{"name":"MRT53","type":"exact"},{"name":"PIGG-CDG","type":"exact"},{"name":"congenital disorder of glycosylation due to PIGG deficiency","type":"exact"},{"name":"early-onset epilepsy-intellectual disability-brain anomalies syndrome","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 13","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 53","type":"exact"},{"name":"intellectual disability, autosomal recessive 53","type":"exact"},{"name":"intellectual disability, autosomal recessive type 53","type":"exact"},{"name":"mental retardation, autosomal recessive 53","type":"exact"},{"name":"mental retardation, autosomal recessive type 53","type":"exact"}],"termid":"MONDO:0014832","terms_by_termid":{"MONDO:0014832":null},"xrefs":{"Monarch":{"xref_id":"0014832"}}}


id: PBO:0058222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4512","termid":"PBO:0058222"}


id: MONDO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally high level of prolactin in the blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpituitarism","termid":"MONDO:0006793"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperprolactinemia","secondary_identifiers":["MEDGEN:5698","SCTID:237662005","ICD9:253.1","NANDO:2200322","UMLS:C0020514","NANDO:2100115","ICD10CM:E22.1","MESH:D006966","EFO:0007319","HP:0000870"],"synonyms":[{"name":"hyperprolactinaemia","type":"exact"},{"name":"hyperprolactinemia","type":"exact"},{"name":"hyperprolactinemia (disease)","type":"exact"},{"name":"hyperprolactinemias","type":"related"},{"name":"hypersecretion syndrome, prolactin","type":"related"},{"name":"inappropriate prolactin secretion","type":"related"},{"name":"inappropriate prolactin secretion syndrome","type":"related"},{"name":"inappropriate secretion prolactin","type":"related"},{"name":"prolactin hypersecretion syndrome","type":"related"},{"name":"prolactin secretion, inappropriate","type":"related"},{"name":"prolactin, inappropriate secretion","type":"related"},{"name":"secretion prolactin, inappropriate","type":"related"},{"name":"secretion, inappropriate prolactin","type":"related"},{"name":"syndrome, prolactin hypersecretion","type":"related"}],"termid":"MONDO:0005804","xrefs":{"Monarch":{"xref_id":"0005804"}}}


id: PBO:0051269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa deleting element or like","termid":"PBO:0051269"}


id: PBO:0077194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM2 domain containing 2","termid":"PBO:0077194"}


id: PBO:0077901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase delta 1","termid":"PBO:0077901"}


id: PBO:0067004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 8, pseudogene","termid":"PBO:0067004"}


id: MONDO:0044724
data:
  {"annotated_genes":["SJAG_03560"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85614],"is_not":false,"summary":null,"term":"MONDO:0044724"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17940","Orphanet:505216","DOID:0070002","OMIM:617698","MEDGEN:1622927","UMLS:C4540171"],"synonyms":[{"name":"3-METHYLGLUTACONIC aciduria, type IX","type":"related"},{"name":"3-Methylglutaconic aciduria, type 9","type":"related"},{"name":"3-methylglutaconic aciduria-epilepsy-spasticity-severe intellectual disability syndrome","type":"exact"},{"name":"3-methylglutaconic acuduria type IX","type":"related"},{"name":"3-methylglutaconic acuduria type IX, MGCA9","type":"exact"},{"name":"MGA9","type":"exact"},{"name":"MGCA9","type":"related"}],"termid":"MONDO:0044724","terms_by_termid":{"MONDO:0044724":null},"xrefs":{"Monarch":{"xref_id":"0044724"}}}


id: MONDO:0012166
data:
  {"annotated_genes":["SJAG_01854"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86517],"is_not":false,"summary":null,"term":"MONDO:0012166"}]},"cv_name":"mondo","definition":"Any hereditary ataxia in which the cause of the disease is a mutation in the RNF170 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"sensory ataxia","termid":"MONDO:0100311"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01854":null},"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant sensory ataxia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:332346","OMIM:608984","UMLS:C1837015","DOID:0111170"],"synonyms":[{"name":"ADSA","type":"exact"},{"name":"Adsa","type":"related"},{"name":"RNF170 hereditary ataxia","type":"exact"},{"name":"SNAX1","type":"exact"},{"name":"ataxia, sensory, 1, autosomal dominant","type":"related"},{"name":"hereditary ataxia caused by mutation in RNF170","type":"exact"}],"termid":"MONDO:0012166","terms_by_termid":{"MONDO:0012166":null},"xrefs":{"Monarch":{"xref_id":"0012166"}}}


id: PBO:0063045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralemmin","termid":"PBO:0063045"}


id: MONDO:0043110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"jones hersh yusk syndrome","secondary_identifiers":["MEDGEN:418974","GARD:3055","UMLS:C2931054","MESH:C535885"],"synonyms":[{"name":"aplasia cutis cleft palate epidermolysis","type":"related"},{"name":"aplasia cutis congenita, cleft palate, epidermolysis bullosa, and ectrodactyly","type":"related"},{"name":"ptosis, ectropion, thin skin, beaked nose","type":"related"}],"termid":"MONDO:0043110","xrefs":{"Monarch":{"xref_id":"0043110"}}}


id: PBO:0062139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 6","termid":"PBO:0062139"}


id: PBO:0057562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 744","termid":"PBO:0057562"}


id: SO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon that does not contain any codons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noncoding_exon","synonyms":[{"name":"noncoding exon","type":"exact"}],"termid":"SO:0000198"}


id: MONDO:0004716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"stomach carcinoma in situ","secondary_identifiers":["ICD9:230.2","SCTID:92756002","UMLS:C0154060","ICD10CM:D00.2","NCIT:C7788","DOID:9138","MEDGEN:56333"],"synonyms":[{"name":"carcinoma in situ of stomach","type":"exact"},{"name":"carcinoma in situ of the stomach","type":"exact"},{"name":"carcinoma of stomach stage 0","type":"exact"},{"name":"carcinoma of the stomach stage 0","type":"exact"},{"name":"gastric carcinoma in situ","type":"exact"},{"name":"gastric carcinoma stage 0","type":"exact"},{"name":"gastric carcinoma, stage 0","type":"exact"},{"name":"stage 0 carcinoma of stomach","type":"exact"},{"name":"stage 0 carcinoma of the stomach","type":"exact"},{"name":"stage 0 gastric (stomach) cancer","type":"exact"},{"name":"stage 0 gastric cancer","type":"exact"},{"name":"stage 0 gastric cancer aJCC v6","type":"exact"},{"name":"stage 0 gastric cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 gastric cancer aJCC v7","type":"exact"},{"name":"stage 0 gastric carcinoma","type":"exact"},{"name":"stage 0 gastric carcinoma in situ","type":"exact"},{"name":"stage 0 stomach cancer","type":"exact"},{"name":"stage 0 stomach carcinoma","type":"exact"},{"name":"stomach carcinoma in situ","type":"exact"},{"name":"stomach carcinoma stage 0","type":"exact"},{"name":"stomach in situ carcinoma","type":"exact"}],"termid":"MONDO:0004716","xrefs":{"Monarch":{"xref_id":"0004716"}}}


id: PBO:0048292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-1-phosphate uridylyltransferase","termid":"PBO:0048292"}


id: MONDO:0957999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0006025"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 80, with variant lissencephaly","secondary_identifiers":["UMLS:C5882733","MEDGEN:1850178","OMIM:620653"],"termid":"MONDO:0957999","xrefs":{"Monarch":{"xref_id":"0957999"}}}


id: PBO:0028867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_mRNA_level_during_vegetative_growth","termid":"PBO:0028867"}


id: GO:0061097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}


id: PBO:0041417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C8 alpha chain","termid":"PBO:0041417"}


id: PBO:0050426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H3","termid":"PBO:0050426"}


id: PBO:0031155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transport","termid":"PBO:0031155"}


id: PBO:0030801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030801"}


id: MONDO:0002760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the bladder arising from metaplastic epithelium. It represents less than 10% of bladder carcinomas. The exception is the Middle East along the Nile Valley, where it represents the most common form of carcinoma because of the endemic nature of schistosomiasis. Bladder squamous cell carcinoma is often associated with long-standing chronic inflammation of the bladder and usually has a poor prognosis. The diagnosis of squamous cell carcinoma of the bladder should be reserved for those tumors that are predominantly keratin forming.","definition_xrefs":["NCIT:C4031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder carcinoma","termid":"MONDO:0004986"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder squamous cell carcinoma","secondary_identifiers":["UMLS:C0279681","DOID:3742","SCTID:255111004","EFO:1000130","MEDGEN:124645","ONCOTREE:BLSC"],"synonyms":[{"name":"BLSC","type":"related"},{"name":"bladder epidermoid carcinoma","type":"exact"},{"name":"bladder squamous cell cancer","type":"exact"},{"name":"bladder squamous cell carcinoma","type":"exact"},{"name":"epidermoid carcinoma of bladder","type":"exact"},{"name":"epidermoid carcinoma of the bladder","type":"exact"},{"name":"epidermoid carcinoma of the urinary bladder","type":"exact"},{"name":"epidermoid carcinoma of urinary bladder","type":"exact"},{"name":"squamous cell carcinoma of bladder","type":"exact"},{"name":"squamous cell carcinoma of the bladder","type":"exact"},{"name":"squamous cell carcinoma of the urinary bladder","type":"exact"},{"name":"squamous cell carcinoma of urinary bladder","type":"exact"},{"name":"urinary bladder epidermoid carcinoma","type":"exact"},{"name":"urinary bladder squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002760","xrefs":{"Monarch":{"xref_id":"0002760"}}}


id: MONDO:0006875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally high intraocular pressure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular hypertension","secondary_identifiers":["MESH:D009798","UMLS:C0028840","MEDGEN:10423","EFO:1001069","SCTID:4210003","MedDRA:10030043","icd11.foundation:535283437","ICD9:365.04","DOID:9282"],"termid":"MONDO:0006875","xrefs":{"Monarch":{"xref_id":"0006875"}}}


id: PBO:0047063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120C","termid":"PBO:0047063"}


id: GO:0035448
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a thylakoid membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"thylakoid membrane","termid":"GO:0042651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of thylakoid membrane","synonyms":[{"name":"extrinsic to thylakoid membrane","type":"narrow"},{"name":"peripheral to thylakoid membrane","type":"exact"}],"termid":"GO:0035448"}


id: MONDO:0011341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, facial abnormalities, micromelia, and intellectual disability","secondary_identifiers":["UMLS:C1863702","MEDGEN:350957","MESH:C566361","OMIM:603572"],"synonyms":[{"name":"microcephaly, facial abnormalities, micromelia, and intellectual disability","type":"exact"},{"name":"microcephaly, facial abnormalities, micromelia, and mental retardation","type":"exact"}],"termid":"MONDO:0011341","xrefs":{"Monarch":{"xref_id":"0011341"}}}


id: GO:0039598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus increases the frequency, rate or extent of the breakdown of host messenger RNA (mRNA) initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target mRNA.","definition_xrefs":["GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host nuclear polyadenylation-dependent mRNA catabolic process (obsolete GO:0039598)","synonyms":[{"name":"induction by virus of host nuclear poly(A)-dependent mRNA catabolic process","type":"related"},{"name":"induction by virus of host nuclear polyadenylation-dependent mRNA catabolic process","type":"exact"},{"name":"virus-mediated host mRNA decay by hyperadenylation","type":"narrow"}],"termid":"GO:0039598"}


id: PBO:0111820
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of condensation (RCC1) domains","termid":"PBO:0111820"}


id: PBO:0085518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S18 and bacterial S13; RPS18B has a paralog, RPS18A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085518"}


id: GO:0044012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2A L-lysine (position 9) = CoA + histone H2A N6-acetyl-L-lysine (position 9).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A acetyltransferase activity","termid":"GO:0043998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0034212","GO:0140096","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"histone H2AK9 acetyltransferase activity","synonyms":[{"name":"histone H2A-K9 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H2A-K9 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H2A-K9 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H2A-K9 specific)","type":"exact"}],"termid":"GO:0044012"}


id: PR:P41004
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02671","PRO:DNx","PANTHER:PTHR18937:SF13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.03c","secondary_identifiers":["UniProtKB:P41004"],"synonyms":[{"name":"Spom972h-SMC4","type":"exact"},{"name":"cell untimely torn protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"chromosome segregation protein cut3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41004"}


id: MONDO:0044336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive colorectal adenocarcinoma characterized by the presence of malignant glandular epithelial cells with prominent intracytoplasmic mucin resulting in the displacement of the nuclei. The malignant glandular cells with intracytoplasmic mucin constitute more than 50% of the malignant cellular infiltrate.","definition_xrefs":["NCIT:C43586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal adenocarcinoma","termid":"MONDO:0005008"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colorectal signet ring cell carcinoma","secondary_identifiers":["MEDGEN:313040","UMLS:C1707440"],"synonyms":[{"name":"colorectal signet Ring cell carcinoma","type":"exact"}],"termid":"MONDO:0044336","xrefs":{"Monarch":{"xref_id":"0044336"}}}


id: PATO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of the thermal energy of a system.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature","termid":"PATO:0000146"}


id: PBO:0065833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB8A, member RAS oncogene family","termid":"PBO:0065833"}


id: MONDO:0022862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cormier Rustin Munnich syndrome","termid":"MONDO:0022862","xrefs":{"Monarch":{"xref_id":"0022862"}}}


id: PBO:0081344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 146","termid":"PBO:0081344"}


id: GO:0004957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostaglandin E receptor activity","synonyms":[{"name":"PGE receptor activity","type":"related"},{"name":"PGE(2) receptor activity","type":"exact"}],"termid":"GO:0004957"}


id: MONDO:0044311
data:
  {"annotated_genes":["SJAG_01632","SJAG_02682","SJAG_03568"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87007,87008,87009],"is_not":false,"summary":null,"term":"MONDO:0044311"}]},"cv_name":"mondo","definition":"BTDD is an autosomal dominant disorder characterized by brachycephaly, trichomegaly, and developmental delay. Although it is caused by dysfunction of the ribosome, patients do not have anemia (summary by {2:Paolini et al., 2017}).","definition_xrefs":["OMIM:617412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01632":null,"SJAG_02682":null,"SJAG_03568":null},"genotype_count":0,"is_obsolete":false,"name":"brachycephaly, trichomegaly, and developmental delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4479431","DOID:0070415","MEDGEN:1374289"],"synonyms":[{"name":"BTDD","type":"related"},{"name":"Macinnes syndrome","type":"related"},{"name":"brachycephaly, trichomegaly, and developmental delay","type":"exact"}],"termid":"MONDO:0044311","terms_by_termid":{"MONDO:0044311":null},"xrefs":{"Monarch":{"xref_id":"0044311"}}}


id: GO:0033960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-methylxanthosine + H2O = 7-methylxanthine + H+ + ribofuranose.","definition_xrefs":["RHEA:10880","EC:3.2.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-methyl nucleosidase activity","secondary_identifiers":["MetaCyc:RXN-7597","KEGG_REACTION:R07918"],"synonyms":[{"name":"7-methylxanthosine nucleosidase activity","type":"related"},{"name":"7-methylxanthosine ribohydrolase activity","type":"related"},{"name":"N-MeNase activity","type":"related"},{"name":"N-methyl nucleoside hydrolase activity","type":"related"},{"name":"methylpurine nucleosidase activity","type":"related"}],"termid":"GO:0033960"}


id: GO:0061811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD = cyclic ADP-ribose + nicotinamide.","definition_xrefs":["GOC:dph","GOC:pad","PMID:11866528","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-ribosyl cyclase activity (obsolete GO:0061811)","termid":"GO:0061811"}


id: PBO:0092013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Threonine (ugu), mitochondrial","termid":"PBO:0092013"}


id: GO:0071103
data:
  {"annotated_genes":["SJAG_03567","SJAG_02394","SJAG_04816","SJAG_04418","SJAG_05193"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70794,119270,59248,72980,113508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006265"}]},"cv_name":"biological_process","definition":"A cellular process that results in a change in the spatial configuration of a DNA molecule. A conformation change can bend DNA, or alter the, twist, writhe, or linking number of a DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02394":null,"SJAG_03567":null,"SJAG_04418":null,"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA conformation change","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA conformation modification","type":"exact"}],"termid":"GO:0071103","terms_by_termid":{"GO:0006265":null}}


id: PBO:0027794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity_during_cellular_response_to_phosphate_starvation","termid":"PBO:0027794"}


id: MONDO:0000579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coronin-1A deficiency (obsolete MONDO:0000579)","termid":"MONDO:0000579","xrefs":{"Monarch":{"xref_id":"0000579"}}}


id: GO:1901056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of trimethylenediamine.","definition_xrefs":["GOC:yaf","UniPathway:UPA00010","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"trimethylenediamine metabolic process","termid":"GO:1901055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimethylenediamine catabolic process","synonyms":[{"name":"trimethylenediamine breakdown","type":"exact"},{"name":"trimethylenediamine catabolism","type":"exact"},{"name":"trimethylenediamine degradation","type":"exact"}],"termid":"GO:1901056"}


id: MONDO:0006652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myocardial infarction in which the anterior wall of the heart is involved. Anterior wall myocardial infarction is often caused by occlusion of the left anterior descending coronary artery. It can be categorized as anteroseptal or anterolateral wall myocardial infarction.","definition_xrefs":["MESH:D056988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"anterolateral myocardial infarction","secondary_identifiers":["EFO:1000812","icd11.foundation:687792216","MedDRA:10068109","UMLS:C0262564","DOID:5845","MEDGEN:78086"],"synonyms":[{"name":"acute anterior wall myocardial infarction","type":"related"},{"name":"anterolateral myocardial infarction","type":"exact"},{"name":"anterolateral myocardial infarctions","type":"related"},{"name":"anteroseptal myocardial infarction","type":"related"},{"name":"anteroseptal myocardial infarctions","type":"related"},{"name":"infarction, anterolateral myocardial","type":"related"},{"name":"infarction, anteroseptal myocardial","type":"related"},{"name":"infarctions, anterolateral myocardial","type":"related"},{"name":"infarctions, anteroseptal myocardial","type":"related"},{"name":"myocardial infarction, anterior wall","type":"related"},{"name":"myocardial infarction, anterolateral","type":"related"},{"name":"myocardial infarction, anteroseptal","type":"related"},{"name":"myocardial infarctions, anterolateral","type":"related"},{"name":"myocardial infarctions, anteroseptal","type":"related"}],"termid":"MONDO:0006652","xrefs":{"Monarch":{"xref_id":"0006652"}}}


id: PBO:0091400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A catalytic subunit Ppa1","termid":"PBO:0091400"}


id: PBO:0000408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NAD+ transporter (predicted)","termid":"PBO:0000408"}


id: GO:0008263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of mismatched pyrimidine bases in DNA. Enzymes with this activity recognize and remove pyrimidines present in mismatches by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch base pair DNA N-glycosylase activity","termid":"GO:0000700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0140097","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"pyrimidine-specific mismatch base pair DNA N-glycosylase activity","synonyms":[{"name":"G/T-mismatch-specific thymine-DNA glycosylase activity","type":"exact"}],"termid":"GO:0008263"}


id: PBO:0056645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 6","termid":"PBO:0056645"}


id: _global:existence_ends_during_or_before
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence ends during or before y if and only if the time point at which x ends is before or equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_physical_entity_and_a_process_or_stage","termid":"_global:relation_between_physical_entity_and_a_process_or_stage"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during_or_before","secondary_identifiers":["RO:0002497"],"termid":"_global:existence_ends_during_or_before"}


id: PBO:0109106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial UbiB/ABC kinase -like family family membrane protein contact site protein Cqd1","termid":"PBO:0109106"}


id: PBO:0049601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 4","termid":"PBO:0049601"}


id: PBO:0044617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendritic cell associated nuclear protein 1","termid":"PBO:0044617"}


id: PATO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased life span","synonyms":[{"name":"high life span","type":"exact"}],"termid":"PATO:0001603"}


id: PBO:0069203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 457, pseudogene","termid":"PBO:0069203"}


id: GO:0030081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein-pigment complex that absorbs light at 800 and 820 nm; is peripherally associated to the bacterial reaction center; transfers excitation energy to the B875 antenna complex.","definition_xrefs":["GOC:kd","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"light-harvesting complex, peripheral complex","termid":"GO:0030079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"B800-820 antenna complex","synonyms":[{"name":"LH3 complex","type":"exact"},{"name":"light harvesting complex III","type":"exact"}],"termid":"GO:0030081"}


id: MONDO:0001203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of lacrimal gland","termid":"MONDO:0024625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"prolapse of lacrimal gland","secondary_identifiers":["DOID:11134","UMLS:C0155231","ICD9:375.16","MEDGEN:509860","SCTID:84777002"],"synonyms":[{"name":"dislocation of lacrimal gland","type":"exact"}],"termid":"MONDO:0001203","xrefs":{"Monarch":{"xref_id":"0001203"}}}


id: GO:1901981
data:
  {"annotated_genes":["SJAG_04077","SJAG_00663","SJAG_04024","SJAG_00152","SJAG_01769","SJAG_00314","SJAG_01382","SJAG_00971","SJAG_00117","SJAG_03705","SJAG_01783","SJAG_04644","SJAG_04963","SJAG_02392","SJAG_04219","SJAG_01135","SJAG_05179","SJAG_02587","SJAG_01748","SJAG_02657","SJAG_03250","SJAG_00368","SJAG_02468","SJAG_01516","SJAG_02613","SJAG_01945","SJAG_02248","SJAG_02166","SJAG_02572","SJAG_00118","SJAG_01519","SJAG_04010","SJAG_00115","SJAG_00173","SJAG_01143","SJAG_00216","SJAG_00638","SJAG_02852","SJAG_04960","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96181],"is_not":false,"summary":null,"term":"GO:1901981"},{"annotations":[88381,117792,102744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005547"},{"annotations":[73784,78078,80129,72175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[100164,72170,80123,96254,73778,90905,67726,100165,100026,110319,74937,91829,109964,70854,73444,78549,80684,105154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032266"},{"annotations":[91073,99612,115217,117863,63228,117368,88313,102089,74014,72937,106923,119309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"},{"annotations":[102745,77948,99613,100447,112830,94832,118240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070273"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol phosphate.","definition_xrefs":["PMID:23445487","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00117":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00173":null,"SJAG_00216":null,"SJAG_00314":null,"SJAG_00368":null,"SJAG_00638":null,"SJAG_00663":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01143":null,"SJAG_01382":null,"SJAG_01516":null,"SJAG_01519":null,"SJAG_01748":null,"SJAG_01769":null,"SJAG_01783":null,"SJAG_01945":null,"SJAG_02166":null,"SJAG_02248":null,"SJAG_02392":null,"SJAG_02468":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02613":null,"SJAG_02657":null,"SJAG_02852":null,"SJAG_03250":null,"SJAG_03705":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04077":null,"SJAG_04219":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol phosphate binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1901981","terms_by_termid":{"GO:0005546":null,"GO:0005547":null,"GO:0032266":null,"GO:0070273":null,"GO:0080025":null,"GO:1901981":null}}


id: PBO:0078314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 10-1","termid":"PBO:0078314"}


id: GO:0048876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of the internal steady state of the amount of a chemical at the level of the retina.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical homeostasis within retina (obsolete GO:0048876)","termid":"GO:0048876"}


id: PBO:0113348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for initiation of the G0 program; prevents degradation of nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway; phosphorylation (S63) by Rim15p increases interaction with and inhibition of PP2A-Cdc55 for timely mitotic progression; can also activate PP2A-Cdc55 complexes and influence Cdc55p localization along with Igo2p; GFP protein localizes to the cytoplasm and nucleus; IGO1 has a paralog, IGO2, that arose from the whole genome duplication","termid":"PBO:0113348"}


id: MONDO:0007134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cooks syndrome is a malformation syndrome affecting the apical structures of digits and presenting with hypo/aplasia of nails and distal phalanges. More than half of digits are usually involved and the thumbs may appear digitalized.","definition_xrefs":["Orphanet:1487"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic nail anomaly (obsolete MONDO:0019285)","termid":"MONDO:0019285"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Cooks syndrome","secondary_identifiers":["OMIM:106995","GARD:4083","MESH:C537766","MEDGEN:354848","SCTID:720747002","UMLS:C1862841"],"synonyms":[{"name":"Cooks syndrome","type":"exact"},{"name":"ODP","type":"exact"},{"name":"anonychia and absence/hypoplasia of distal phalanges","type":"related"},{"name":"anonychia-onychodystrophy with hypoplasia or absence of distal phalanges","type":"related"},{"name":"anonychia-onychodystrophy with hypoplasia or absence of distal phalanges syndrome","type":"exact"}],"termid":"MONDO:0007134","xrefs":{"Monarch":{"xref_id":"0007134"}}}


id: GO:0160194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a sensory hair cell stereocilium bundle.","definition_xrefs":["PMID:28266911","PMID:6978627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stereocilium bundle organization","termid":"GO:0160194"}


id: MONDO:0009463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal carotid arteries, hypoplasia of","secondary_identifiers":["OMIM:243100","MEDGEN:383757","UMLS:C1855736"],"synonyms":[{"name":"internal carotid arteries, hypoplasia of","type":"exact"}],"termid":"MONDO:0009463","xrefs":{"Monarch":{"xref_id":"0009463"}}}


id: PBO:0001100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jmjC domain","termid":"PBO:0001100"}


id: GO:0047275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-acetyl-D-glucosaminyl-(1,3)-D-galactosyl-(1,4)-D-glucosylceramide + UDP-galactose = D-galactosyl-N-acetyl-D-glucosaminyl-(1,3)-D-galactosyl-(1,4)-D-glucosylceramide + UDP.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity (obsolete GO:0047275)","termid":"GO:0047275"}


id: PBO:0109602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A3","termid":"PBO:0109602"}


id: GO:1903640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["GO_REF:0000058","PMID:11123201","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gastric acid secretion","termid":"GO:0060455"},{"relation_name":"is_a","term_name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"},{"relation_name":"negatively_regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastrin-induced gastric acid secretion","synonyms":[{"name":"down regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"down-regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"downregulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"inhibition of gastrin-induced gastric acid secretion","type":"narrow"}],"termid":"GO:1903640"}


id: GO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the formation of a stable duplex DNA that contains one strand from each of the two recombining DNA molecules.","definition_xrefs":["PMID:9334324","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"meiotic heteroduplex formation","termid":"GO:0000713"}


id: GO:0015312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + polyamine(in) = H+(in) + polyamine(out).","definition_xrefs":["TC:2.A.1.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"polyamine:proton antiporter activity","synonyms":[{"name":"polyamine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015312"}


id: PBO:0076589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 10B","termid":"PBO:0076589"}


id: MONDO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior scleritis","secondary_identifiers":["ICD9:379.07","icd11.foundation:982348440","MEDGEN:509932","SCTID:267660007","UMLS:C0155357","DOID:13676"],"termid":"MONDO:0001774","xrefs":{"Monarch":{"xref_id":"0001774"}}}


id: GO:0003846
data:
  {"annotated_genes":["SJAG_03609"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114518],"is_not":false,"summary":null,"term":"GO:0003846"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol.","definition_xrefs":["RHEA:16741","PMID:4016575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"2-acylglycerol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6800334","Reactome:R-HSA-5696448","EC:2.3.1.22","MetaCyc:2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN"],"synonyms":[{"name":"acyl coenzyme A-monoglyceride acyltransferase activity","type":"related"},{"name":"acyl-CoA:2-acylglycerol O-acyltransferase activity","type":"related"},{"name":"acylglycerol palmitoyltransferase activity","type":"related"},{"name":"monoacylglycerol acyltransferase activity","type":"related"},{"name":"monoglyceride acyltransferase activity","type":"related"}],"termid":"GO:0003846","terms_by_termid":{"GO:0003846":null}}


id: PBO:0084320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin alpha homolog; forms a dimer with karyopherin beta Kap95p to mediate import of nuclear proteins, binds the nuclear localization signal of the substrate during import; involved in cotranslational protein degradation; binds ribosome-bound nascent polypeptides; Srp1p and Sts1p couple proteasomes to nascent polypeptides emerging from the ribosome for cotranslational degradation","termid":"PBO:0084320"}


id: FYECO:0000218
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which beta-estradiol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ beta-estradiol","termid":"FYECO:0000218"}


id: GO:0005017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with platelet-derived growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0004672","GO:0140096","GO:0003674","GO:0016301","GO:0003824","GO:0038023"],"is_obsolete":false,"name":"platelet-derived growth factor receptor activity","synonyms":[{"name":"PDGF receptor activity","type":"exact"},{"name":"PDGF-activated receptor activity","type":"exact"},{"name":"PDGFR activity","type":"exact"},{"name":"platelet-derived growth factor-activated receptor activity","type":"exact"}],"termid":"GO:0005017"}


id: MONDO:0017883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multilocular cystic clear cell renal cell neoplasm of low malignant potential (obsolete MONDO:0017883)","termid":"MONDO:0017883","xrefs":{"Monarch":{"xref_id":"0017883"}}}


id: MOD:01203
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-[(pyrid-3-yl)acetyl]lysine.","definition_xrefs":["PubMed:9276974","Unimod:25#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridylacetylated residue","termid":"MOD:00418"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(pyridylacetyl)lysine","synonyms":[{"name":"Pyridylacetyl","type":"related"},{"name":"pyridylacetyl","type":"related"}],"termid":"MOD:01203"}


id: PBO:0069654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 931, pseudogene","termid":"PBO:0069654"}


id: FYPO:0001723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more ferrichromes measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"ferrichrome absent from cell","synonyms":[{"name":"ferrichrome absent from cell during mitotic cell cycle","type":"related"},{"name":"ferrichrome absent from cell during vegetative growth","type":"exact"},{"name":"siderophore absent from cell","type":"broad"}],"termid":"FYPO:0001723"}


id: GO:0033583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding the rhabdomere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"rhabdomere","termid":"GO:0016028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"rhabdomere membrane","termid":"GO:0033583"}


id: GO:1901130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gentamycin.","definition_xrefs":["UniPathway:UPA00967","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"gentamycin metabolic process","termid":"GO:1901128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"gentamycin biosynthetic process","synonyms":[{"name":"gentamycin anabolism","type":"exact"},{"name":"gentamycin biosynthesis","type":"exact"},{"name":"gentamycin formation","type":"exact"},{"name":"gentamycin synthesis","type":"exact"}],"termid":"GO:1901130"}


id: SO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Primarily found in animals, the terminal inverted repeat (TIR) transposon superfamily piggyBac elements favour insertion adjacent to TTAA.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac_TIR_transposon","synonyms":[{"name":"DTB transposon","type":"exact"},{"name":"PiggyBac transposable element","type":"exact"},{"name":"piggyBac TIR transposon","type":"exact"}],"termid":"SO:0002283"}


id: PBO:0049853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT domain E3 ubiquitin protein ligase 2","termid":"PBO:0049853"}


id: PR:Q9P779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.11 gene.","definition_xrefs":["UniProtKB:Q9P779","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin C1711.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.11","synonyms":[{"name":"Spom972h-SPBC1711.11","type":"exact"}],"termid":"PR:Q9P779"}


id: MONDO:0016704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glial tumor of neuroepithelial tissue with unknown origin (obsolete MONDO:0016704)","secondary_identifiers":["Orphanet:251668"],"termid":"MONDO:0016704","xrefs":{"Monarch":{"xref_id":"0016704"}}}


id: PBO:0050458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOMER3 antisense RNA 1","termid":"PBO:0050458"}


id: GO:0038027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by apolipoprotein A-I binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:16443932","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:0038027"}


id: PBO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal defects","termid":"PBO:0001159"}


id: GO:0006252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete CTP reduction (obsolete GO:0006252)","synonyms":[{"name":"CTP reduction","type":"exact"}],"termid":"GO:0006252"}


id: PBO:0110826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, glucose starvation sensing, Rst2","termid":"PBO:0110826"}


id: PBO:0003945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 gamma subunit (predicted)","termid":"PBO:0003945"}


id: GO:0102852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:3-2-16:0-phosphatidylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:3-2-16:0-phosphatidylglycerol desaturase activity (obsolete GO:0102852)","termid":"GO:0102852"}


id: MONDO:0021439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pituitary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign reproductive system neoplasm","termid":"MONDO:0000383"},{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"benign neoplasm of brain","termid":"MONDO:0021451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of pituitary gland","secondary_identifiers":["DOID:60009","SCTID:92296004","NCIT:C4782","ICD10CM:D35.2","icd11.foundation:1871539651","MEDGEN:141679","UMLS:C0496901"],"synonyms":[{"name":"benign neoplasm of pituitary","type":"exact"},{"name":"benign neoplasm of the pituitary","type":"exact"},{"name":"benign neoplasm of the pituitary gland","type":"exact"},{"name":"benign pituitary gland neoplasm","type":"exact"},{"name":"benign pituitary gland tumor","type":"exact"},{"name":"benign pituitary gland tumour","type":"exact"},{"name":"benign pituitary neoplasm","type":"exact"},{"name":"benign pituitary tumor","type":"exact"},{"name":"benign pituitary tumour","type":"exact"},{"name":"benign tumor of pituitary","type":"exact"},{"name":"benign tumor of pituitary gland","type":"exact"},{"name":"benign tumor of the pituitary","type":"exact"},{"name":"benign tumor of the pituitary gland","type":"exact"},{"name":"benign tumour of pituitary","type":"exact"},{"name":"benign tumour of pituitary gland","type":"exact"},{"name":"benign tumour of the pituitary","type":"exact"},{"name":"benign tumour of the pituitary gland","type":"exact"},{"name":"pituitary gland benign neoplasm","type":"exact"},{"name":"pituitary neoplasms, benign","type":"exact"},{"name":"pituitary tumor, benign","type":"exact"}],"termid":"MONDO:0021439","xrefs":{"Monarch":{"xref_id":"0021439"}}}


id: FYPO:0005798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex during vegetative growth","termid":"FYPO:0000929"},{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cell cortex of cell tip during vegetative growth","synonyms":[{"name":"decreased protein localisation to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell end during vegetative growth","type":"related"},{"name":"decreased protein localization to cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip cortex during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell cortex of cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005798"}


id: GO:0034516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B6 stimulus. Vitamin B6 encompasses pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B6","termid":"GO:0034516"}


id: PBO:0071858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 53","termid":"PBO:0071858"}


id: PBO:0091678
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defect in gene Silencing at centromeric Heterochromatin","termid":"PBO:0091678"}


id: GO:0043249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state.","definition_xrefs":["GOC:jl","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"erythrocyte development","termid":"GO:0048821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte maturation","synonyms":[{"name":"RBC maturation","type":"exact"},{"name":"red blood cell maturation","type":"exact"}],"termid":"GO:0043249"}


id: PBO:0086635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YGL036W is not an essential gene","termid":"PBO:0086635"}


id: PBO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate synthase 1","termid":"PBO:0043104"}


id: PBO:0031245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_division","termid":"PBO:0031245"}


id: PBO:0045445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPYD antisense RNA 1","termid":"PBO:0045445"}


id: PBO:0083533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF TIM13/YGR181W","termid":"PBO:0083533"}


id: PBO:0047204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 218 member B, pseudogene","termid":"PBO:0047204"}


id: PBO:0083381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps CCT8/YJL008C, a verified gene encoding a subunit of the cytosolic chaperonin Cct ring complex","termid":"PBO:0083381"}


id: PBO:0003419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribose diphosphatase, NudF subfamily (predicted)","termid":"PBO:0003419"}


id: PBO:0113313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; PalA/AIP1/Alix family member; interaction with the ESCRT-III subunit Snf7p suggests a relationship between pH response and multivesicular body formation; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113313"}


id: PBO:0064080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 114","termid":"PBO:0064080"}


id: FYPO:0001018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"mislocalized septum, near new end","termid":"FYPO:0001391"},{"relation_name":"is_a","term_name":"abnormal NETO","termid":"FYPO:0000147"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0005568"],"is_obsolete":false,"name":"abolished NETO","synonyms":[{"name":"NETO abolished","type":"exact"},{"name":"abolished NETO during mitotic cell cycle","type":"related"},{"name":"abolished NETO during vegetative growth","type":"exact"},{"name":"abolished activation of bipolar cell growth","type":"related"},{"name":"abolished cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"abolished new end take-off","type":"exact"},{"name":"abolished switch from monopolar to bipolar cell growth","type":"exact"},{"name":"absence of NETO","type":"exact"}],"termid":"FYPO:0001018"}


