# terms

id: GO:0071690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the myosin-based thick filaments of myofibrils in cardiac muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle myosin thick filament assembly","termid":"GO:0071688"},{"relation_name":"part_of","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0065003","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"cardiac muscle myosin thick filament assembly","termid":"GO:0071690"}


id: MONDO:0957477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYT1L-related developmental delay-intellectual disability-obesity syndrome","secondary_identifiers":["Orphanet:647799","UMLS:C5816753","MEDGEN:1843395"],"termid":"MONDO:0957477","xrefs":{"Monarch":{"xref_id":"0957477"}}}


id: GO:0048941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a glial cell in the posterior lateral line nerve over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"},{"relation_name":"part_of","term_name":"posterior lateral line nerve glial cell differentiation","termid":"GO:0048931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve glial cell development","termid":"GO:0048941"}


id: PBO:0059119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 1","termid":"PBO:0059119"}


id: GO:0052418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving protein macromolecules within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by organism of protein in other organism involved in symbiotic interaction (obsolete GO:0052418)","synonyms":[{"name":"metabolism by organism of protein in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052418"}


id: PBO:0079727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 3 (pseudogene)","termid":"PBO:0079727"}


id: GO:0007173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor EGFR (ERBB1) on the surface of a cell. The pathway ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epidermal growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-177929"],"synonyms":[{"name":"EGF receptor signaling pathway","type":"exact"},{"name":"EGF receptor signalling pathway","type":"exact"},{"name":"EGFR signaling pathway","type":"exact"},{"name":"ERBB1 signaling pathway","type":"exact"},{"name":"epidermal growth factor receptor signalling pathway","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-1 signaling pathway","type":"exact"}],"termid":"GO:0007173"}


id: GO:0060068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the vagina over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female genitalia development","termid":"GO:0030540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagina development","termid":"GO:0060068"}


id: GO:0010277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: chlorophyllide a + 2 H+ + 2 NADPH + 2 O2 = chlorophyllide b + 3 H2O + 2 NADP+.","definition_xrefs":["RHEA:30359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"chlorophyllide a oxygenase activity","secondary_identifiers":["EC:1.14.13.122","GO:0046407"],"synonyms":[{"name":"CAO activity","type":"broad"},{"name":"chlorophyll a oxygenation activity","type":"exact"},{"name":"chlorophyll b synthesis activity","type":"exact"},{"name":"chlorophyll-b synthesis activity","type":"related"},{"name":"chlorophyllide a:oxygen 7-oxidoreduction activity","type":"related"},{"name":"chlorophyllide-a oxygenation activity","type":"related"}],"termid":"GO:0010277"}


id: PBO:0077170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2 pseudogene 1","termid":"PBO:0077170"}


id: GO:0007450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis of the imaginal disc. Imaginal disks are masses of hypodermic cells, carried by the larvae of some insects after leaving the egg, from which masses the wings and legs of the adult are subsequently formed.","definition_xrefs":["GOC:jid","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral pattern formation, imaginal disc","synonyms":[{"name":"dorsal-ventral pattern formation, imaginal disc","type":"exact"},{"name":"dorsoventral pattern formation, imaginal disc","type":"exact"}],"termid":"GO:0007450"}


id: PBO:0027781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_dephosphorylation","termid":"PBO:0027781"}


id: MONDO:0001395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular keratitis","secondary_identifiers":["DOID:11871","icd11.foundation:1283506871","ICD9:370.22","MEDGEN:509772","SCTID:2853006","UMLS:C0155076"],"termid":"MONDO:0001395","xrefs":{"Monarch":{"xref_id":"0001395"}}}


id: MONDO:1011424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complement component 2 deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 2 deficiency, non-human animal","secondary_identifiers":["OMIA:001625"],"synonyms":[{"name":"C2 deficiency","type":"exact"}],"termid":"MONDO:1011424","xrefs":{"Monarch":{"xref_id":"1011424"}}}


id: GO:0015602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + nonpolar amino acid(out) = ADP + phosphate + nonpolar amino acid(in).","definition_xrefs":["TC:3.A.1.4.1","EC:3.6.3.22"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine/isoleucine/valine porter activity (obsolete GO:0015602)","synonyms":[{"name":"leucine/isoleucine/valine porter activity","type":"exact"}],"termid":"GO:0015602"}


id: PBO:0045238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 6","termid":"PBO:0045238"}


id: PBO:0048528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 4","termid":"PBO:0048528"}


id: PBO:0058372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4744","termid":"PBO:0058372"}


id: MONDO:0014775
data:
  {"annotated_genes":["SJAG_01589","SJAG_01890"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86261,86262],"is_not":false,"summary":null,"term":"MONDO:0014775"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the SLC25A26 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"},{"relation_name":"is_a","term_name":"mitochondrial substrate carrier disorder","termid":"MONDO:0016801"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 28","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111470","Orphanet:466784","MEDGEN:1800504","GARD:17831","UMLS:C5569081","OMIM:616794"],"synonyms":[{"name":"COXPD28","type":"exact"},{"name":"SLC25A26 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation defect type 28","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 28","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in SLC25A26","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 28","type":"exact"},{"name":"neonatal severe cardiopulmonary failure due to mitochondrial methylation defect","type":"exact"}],"termid":"MONDO:0014775","terms_by_termid":{"MONDO:0014775":null},"xrefs":{"Monarch":{"xref_id":"0014775"}}}


id: GO:0019987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of anti-apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of anti-apoptosis (obsolete GO:0019987)","synonyms":[{"name":"down regulation of anti-apoptosis","type":"exact"},{"name":"down-regulation of anti-apoptosis","type":"exact"},{"name":"downregulation of anti-apoptosis","type":"exact"},{"name":"inhibition of anti-apoptosis","type":"narrow"},{"name":"negative regulation of anti-apoptosis","type":"exact"}],"termid":"GO:0019987"}


id: PBO:0091807
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus rsv1","termid":"PBO:0091807"}


id: PBO:0087628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic iron-sulfur (FeS) protein assembly machinery; required for maturation of cytosolic and nuclear FeS proteins and for normal resistance to oxidative stress; deficiency results in shortened lifespan and sensitivity to paraquat; homologous to human Narf","termid":"PBO:0087628"}


id: PBO:0108921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMX1 pseudogene 1","termid":"PBO:0108921"}


id: GO:0060515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the urogenital sinus epithelium into the area in which the prostate gland will develop.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate field specification","termid":"GO:0060515"}


id: PBO:0006295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory vesicle docking component Mso1 (predicted)","termid":"PBO:0006295"}


id: GO:0051472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"glucosylglycerol metabolic process","synonyms":[{"name":"glucosylglycerol metabolism","type":"exact"}],"termid":"GO:0051472"}


id: MONDO:0001617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by sudden, temporary, usually short-lived memory loss, not associated with a neurologic disorder. Affected individuals lose memory function for recent events and have a decreased ability to retain new information. It is usually a solitary event.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amnestic disorder","termid":"MONDO:0001152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"transient global amnesia","secondary_identifiers":["HP:0010534","icd11.foundation:1524600518","MESH:D020236","MEDGEN:83275","ICD9:437.7","NCIT:C85198","ICD10CM:G45.4","UMLS:C0338591","DOID:13027"],"synonyms":[{"name":"transient global amnesia","type":"exact"},{"name":"transient global amnesia (disease)","type":"exact"}],"termid":"MONDO:0001617","xrefs":{"Monarch":{"xref_id":"0001617"}}}


id: GO:0016767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete geranylgeranyl-diphosphate geranylgeranyltransferase activity (obsolete GO:0016767)","termid":"GO:0016767"}


id: PBO:0059862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitoregulin","termid":"PBO:0059862"}


id: GO:0052487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052487)","synonyms":[{"name":"negative regulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont JA-mediated defense response","type":"exact"}],"termid":"GO:0052487"}


id: PBO:0084734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial integral inner membrane protein; involved in membrane insertion of C-terminus of Cox2p, interacts genetically and physically with Cox18p; deletion mutant sensitive to the anti-Pneumocystis carinii drug pentamidine","termid":"PBO:0084734"}


id: PATO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000215 respiratory function (obsolete PATO:0000215)","termid":"PATO:0000215"}


id: MONDO:0003582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant inherited syndrome caused by mutations in the BRCA1 or BRCA2 genes. Patients are at high risk of developing breast cancer, particularly before the age of fifty, high risk of developing a second primary breast cancer, and high risk of developing both breast and ovarian cancer.","definition_xrefs":["NCIT:C8493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare malignant breast tumor (obsolete MONDO:0015870)","termid":"MONDO:0015870"},{"relation_name":"excluded_subClassOf","term_name":"familial ovarian cancer","termid":"MONDO:0016248"},{"relation_name":"excluded_subClassOf","term_name":"hereditary breast carcinoma","termid":"MONDO:0016419"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"hereditary breast ovarian cancer syndrome","secondary_identifiers":["MESH:D061325","MEDGEN:151793","SCTID:718220008","Orphanet:145","GARD:15010","ICD10CM:C50","NORD:1936","UMLS:C0677776","DOID:5683","icd11.foundation:1258896144"],"synonyms":[{"name":"BRCA1- and BRCA2-associated hereditary breast and ovarian cancer","type":"exact"},{"name":"BRCA1- and BRCA2-associated hereditary breast and ovarian cancer (HBOC)","type":"exact"},{"name":"HBOC syndrome","type":"related"},{"name":"HBOC syndromes","type":"related"},{"name":"Hereditary Breast and Ovarian Cancer Syndrome","type":"exact"},{"name":"familial breast and ovarian cancer syndrome","type":"exact"},{"name":"familial breast/ovarian cancer (BRCA1, BRCA2)","type":"exact"},{"name":"hereditary breast and ovarian cancer","type":"exact"},{"name":"hereditary breast and ovarian cancer syndrome","type":"exact"},{"name":"hereditary breast ovarian cancer","type":"related"},{"name":"hereditary breast ovarian cancer syndrome","type":"exact"},{"name":"hereditary breast/ovarian cancer (BRCA1, BRCA2)","type":"exact"},{"name":"syndrome, HBOC","type":"related"},{"name":"syndromes, HBOC","type":"related"}],"termid":"MONDO:0003582","xrefs":{"Monarch":{"xref_id":"0003582"}}}


id: PBO:0057277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 499b","termid":"PBO:0057277"}


id: PBO:0069910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1201, pseudogene","termid":"PBO:0069910"}


id: PBO:0070254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 197 pseudogene","termid":"PBO:0070254"}


id: PR:O36031
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hit1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized zinc-finger protein C4F10.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.19c","synonyms":[{"name":"Spom972h-hit1","type":"exact"}],"termid":"PR:O36031"}


id: GO:0044816
data:
  {"annotated_genes":["SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91314],"is_not":false,"summary":null,"term":"GO:0044816"}]},"cv_name":"cellular_component","definition":"A dimer of Nsk1 (nucleolus spindle kinetochore 1) and the dynein light chain, Dlc1. The dimers form an oligomeric chain structure. Functions in the regulation of kinetochore-microtubule interactions and chromosome segregation.","definition_xrefs":["GOC:vw","PMID:22065639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Nsk1-Dlc1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044816","terms_by_termid":{"GO:0044816":null}}


id: PBO:0001145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kar3 subfamily","termid":"PBO:0001145"}


id: MONDO:0018379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"avascular necrosis","termid":"MONDO:0018373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary avascular necrosis","secondary_identifiers":["UMLS:C5680038","GARD:21664","MEDGEN:1842421","Orphanet:399302"],"synonyms":[{"name":"primary AVN","type":"exact"}],"termid":"MONDO:0018379","xrefs":{"Monarch":{"xref_id":"0018379"}}}


id: GO:1903745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nematode pharyngeal pumping.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25329901","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode pharyngeal pumping","termid":"GO:0043051"},{"relation_name":"is_a","term_name":"negative regulation of eating behavior","termid":"GO:1903999"},{"relation_name":"negatively_regulates","term_name":"nematode pharyngeal pumping","termid":"GO:0043050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode pharyngeal pumping","synonyms":[{"name":"down regulation of pharyngeal pumping","type":"exact"},{"name":"down regulation of pumping behavior","type":"related"},{"name":"down-regulation of pharyngeal pumping","type":"exact"},{"name":"down-regulation of pumping behavior","type":"related"},{"name":"downregulation of pharyngeal pumping","type":"exact"},{"name":"downregulation of pumping behavior","type":"related"},{"name":"inhibition of pharyngeal pumping","type":"narrow"},{"name":"inhibition of pumping behavior","type":"related"},{"name":"negative regulation of pumping behavior","type":"related"}],"termid":"GO:1903745"}


id: FYPO:0006493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of chitin synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal chitin synthase activity","termid":"FYPO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased chitin synthase activity","termid":"FYPO:0006493"}


id: GO:0017131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U-rich sequence in the 3'-end of nuclear-transcribed mRNAs; required for cytoplasmic polyadenylylation.","definition_xrefs":["PMID:7954828","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-pyrimidine tract binding","termid":"GO:0008187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"uridine-rich cytoplasmic polyadenylylation element binding","synonyms":[{"name":"U-rich CPE binding","type":"exact"},{"name":"uridine-rich cytoplasmic polyadenylation element binding","type":"exact"}],"termid":"GO:0017131"}


id: MONDO:1011642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spontaneous cardiomyopathy, non-human animal","secondary_identifiers":["OMIA:000164"],"termid":"MONDO:1011642","xrefs":{"Monarch":{"xref_id":"1011642"}}}


id: PBO:0080617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR53 pseudogene 1","termid":"PBO:0080617"}


id: GO:0009639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:ai","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to red or far red light","termid":"GO:0009639"}


id: GO:2001069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to glycogen.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"glycogen binding","synonyms":[{"name":"animal starch binding","type":"related"},{"name":"liver starch binding","type":"related"}],"termid":"GO:2001069"}


id: GO:1902539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A macropinocytosis which involves another organism.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism macropinocytosis (obsolete GO:1902539)","termid":"GO:1902539"}


id: FYPO:0000207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to caffeine is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular response to caffeine","synonyms":[{"name":"abnormal cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to caffeine during vegetative growth","type":"exact"}],"termid":"FYPO:0000207"}


id: PBO:0041668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 1","termid":"PBO:0041668"}


id: PBO:0061376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 36","termid":"PBO:0061376"}


id: MONDO:0100549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor of the liver, characterized by hyperplastic growth of hepatocytes and a central fibrovascular scar.","definition_xrefs":["PMID:35687520","PMID:23396642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatobiliary benign neoplasm","termid":"MONDO:0859689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"focal nodular hyperplasia","synonyms":[{"name":"FNH","type":"exact"},{"name":"focal nodular hyperplasia of the liver","type":"exact"},{"name":"hepatic focal nodular hyperplasia","type":"exact"}],"termid":"MONDO:0100549","xrefs":{"Monarch":{"xref_id":"0100549"}}}


id: PBO:0035778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_prometaphase","termid":"PBO:0035778"}


id: MONDO:0005855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common, benign, usually self-limited viral infection of the skin and occasionally the conjunctivae by a poxvirus (molluscum contagiosum virus). (Dorland, 27th ed)","definition_xrefs":["MESH:D008976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molluscum contagiosum","secondary_identifiers":["icd11.foundation:82201615","EFO:0007375","UMLS:C0026393","DOID:8867","ICD10CM:B08.1","MEDGEN:10081","ICD9:078.0","SCTID:40070004"],"termid":"MONDO:0005855","xrefs":{"Monarch":{"xref_id":"0005855"}}}


id: GO:0046178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"D-gluconate metabolic process","termid":"GO:0019521"},{"relation_name":"is_a","term_name":"aldonic acid biosynthetic process","termid":"GO:0046175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"D-gluconate biosynthetic process","synonyms":[{"name":"D-gluconate anabolism","type":"exact"},{"name":"D-gluconate biosynthesis","type":"exact"},{"name":"D-gluconate formation","type":"exact"},{"name":"D-gluconate synthesis","type":"exact"}],"termid":"GO:0046178"}


id: PBO:0069185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 439, pseudogene","termid":"PBO:0069185"}


id: MONDO:0001461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatophyte disease of the glabrous skin, excluding the scalp, beard, face, hands, feet, and groin.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea corporis","secondary_identifiers":["DOID:12179","ICD9:110.5","UMLS:C0040252","ICD10CM:B35.4","SCTID:84849002","MEDGEN:508197"],"synonyms":[{"name":"dermatophytosis of the body","type":"exact"},{"name":"dermatophytosis of the trunk","type":"exact"}],"termid":"MONDO:0001461","xrefs":{"Monarch":{"xref_id":"0001461"}}}


id: PBO:0055009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2424","termid":"PBO:0055009"}


id: GO:0070915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the phospholipid derivative lysophosphatidic acid, and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["PMID:15755723","GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bioactive lipid receptor activity","termid":"GO:0045125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lysophosphatidic acid receptor activity","synonyms":[{"name":"LPA receptor activity","type":"exact"}],"termid":"GO:0070915"}


id: PBO:0039855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 21","termid":"PBO:0039855"}


id: GO:0045695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of embryo sac egg cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of embryo sac egg cell differentiation","termid":"GO:0045694"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"embryo sac egg cell differentiation","termid":"GO:0009560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryo sac egg cell differentiation","synonyms":[{"name":"down regulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"down-regulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"downregulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"inhibition of female gametophyte egg cell differentiation","type":"narrow"},{"name":"negative regulation of female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0045695"}


id: MONDO:0003890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive transitional cell carcinoma that arises from the urinary bladder urothelium.","definition_xrefs":["NCIT:C27885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"},{"relation_name":"is_a","term_name":"infiltrating urothelial carcinoma","termid":"MONDO:0040678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"infiltrating bladder urothelial carcinoma","secondary_identifiers":["MEDGEN:233582","UMLS:C1334281","DOID:6477"],"synonyms":[{"name":"infiltrating bladder urothelial carcinoma","type":"exact"},{"name":"infiltrating transitional cell carcinoma of the urinary bladder","type":"exact"},{"name":"invasive bladder transitional cell carcinoma","type":"exact"},{"name":"invasive bladder urothelial carcinoma","type":"exact"},{"name":"invasive transitional cell carcinoma of the urinary bladder","type":"exact"}],"termid":"MONDO:0003890","xrefs":{"Monarch":{"xref_id":"0003890"}}}


id: PR:000028943
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase reduced form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRA/Red+","pombase_gene_id":"SPAC29E6.05c","synonyms":[{"name":"MSRA/Red+","type":"exact"},{"name":"PomBase_original_PRO_term_name: peptide methionine sulfoxide reductase reduced form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-MSRA/Red+","type":"exact"}],"termid":"PR:000028943"}


id: PBO:0046488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiregulin","termid":"PBO:0046488"}


id: MONDO:0014426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nanophthalmia in which the cause of the disease is a mutation in the TMEM98 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nanophthalmia","termid":"MONDO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nanophthalmos 4","secondary_identifiers":["MEDGEN:863285","GARD:18629","OMIM:615972","UMLS:C4014848"],"synonyms":[{"name":"NNO4","type":"related"},{"name":"Nanophthalmia 4","type":"related"},{"name":"TMEM98 nanophthalmia","type":"exact"},{"name":"nanophthalmia caused by mutation in TMEM98","type":"exact"},{"name":"nanophthalmos 4","type":"exact"},{"name":"nanophthalmos type 4","type":"exact"}],"termid":"MONDO:0014426","xrefs":{"Monarch":{"xref_id":"0014426"}}}


id: GO:0045010
data:
  {"annotated_genes":["SJAG_01268","SJAG_03086","SJAG_01964","SJAG_02245","SJAG_03455","SJAG_04624","SJAG_01732","SJAG_02228","SJAG_04100","SJAG_01384","SJAG_02075","SJAG_04479"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89689],"is_not":false,"summary":null,"term":"GO:0045010"},{"annotations":[75095,98241,79368,80294,78154,107482,80040,103059,78486,76760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[74771],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament. Nucleation is slow relative to the subsequent addition of more monomers to extend the filament.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"actin nucleation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin filament nucleation","type":"exact"}],"termid":"GO:0045010","terms_by_termid":{"GO:0034314":null,"GO:0034316":null,"GO:0045010":null}}


id: SO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence obtained from a single sequencing experiment. Typically a read is produced when a base calling program interprets information from a chromatogram trace file produced from a sequencing machine.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"read","termid":"SO:0000150"}


id: FYPO:0006062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which one septin ring assembles in the normal location, but one or more additional septin rings also form in abnormal locations.","definition_xrefs":["PomBase:mah","PMID:15385632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septin ring assembly during vegetative growth","termid":"FYPO:0006061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"ectopic septin ring assembly during vegetative growth","synonyms":[{"name":"ectopic septin ring assembly during mitotic cell cycle","type":"related"},{"name":"ectopic septin ring formation during vegetative growth","type":"exact"}],"termid":"FYPO:0006062"}


id: PBO:0047987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member D, pseudogene","termid":"PBO:0047987"}


id: FYPO:0004706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer monomeric ribosomes (80S monosomes) in the cytosol than normal.","definition_xrefs":["PMID:26122634","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at decreased level","type":"exact"},{"name":"decreased cytosolic 80S monosome level","type":"exact"},{"name":"decreased cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"decreased cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"decreased cytosolic ribosome level","type":"broad"},{"name":"decreased level of cytosolic monomeric ribosomes","type":"exact"},{"name":"reduced cytosolic monomeric ribosome level","type":"exact"}],"termid":"FYPO:0004706"}


id: PBO:0061527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSL1 component of MIS12 kinetochore complex","termid":"PBO:0061527"}


id: FYPO:0002727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of saccharopine dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal saccharopine dehydrogenase activity","termid":"FYPO:0002726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased saccharopine dehydrogenase activity","synonyms":[{"name":"reduced saccharopine dehydrogenase activity","type":"exact"}],"termid":"FYPO:0002727"}


id: PBO:0012547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 3 (predicted)","termid":"PBO:0012547"}


id: GO:0030009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cofactor for the serine protease complement factor I.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete complement factor H activity (obsolete GO:0030009)","synonyms":[{"name":"complement factor H activity","type":"exact"}],"termid":"GO:0030009"}


id: FYPO:0008244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from the prospore wall.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to prospore wall","termid":"FYPO:0008244"}


id: PBO:0076924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Dp-1","termid":"PBO:0076924"}


id: PBO:0091696
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.825012G>A","termid":"PBO:0091696"}


id: MONDO:1012845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary neurological disease that occurs in cattle and that is characterized by an inability to stand, significant forelimb extensor rigidity and excessive forelimb lateral abduction at birth due to a mutation in the UCHL1 gene.","definition_xrefs":["PMID:34955244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropathy with splayed forelimbs, UCHL1-related, cattle","secondary_identifiers":["OMIA:002298-9913"],"synonyms":[{"name":"JNS","type":"exact"},{"name":"Jersey neuropathy with splayed forelimbs, cattle","type":"related"}],"termid":"MONDO:1012845","xrefs":{"Monarch":{"xref_id":"1012845"}}}


id: FYPO:0000975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to mercury ions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0000298"],"is_obsolete":false,"name":"normal cellular response to mercury ion","synonyms":[{"name":"normal cellular response to mercury","type":"exact"},{"name":"normal cellular response to mercury ion during mitotic cell cycle","type":"related"},{"name":"normal cellular response to mercury ion during vegetative growth","type":"exact"}],"termid":"FYPO:0000975"}


id: MONDO:0028868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic frontotemporal degeneration with dementia (obsolete MONDO:0028868)","secondary_identifiers":["Orphanet:276061"],"termid":"MONDO:0028868","xrefs":{"Monarch":{"xref_id":"0028868"}}}


id: GO:1902417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of (+)-abscisic acid D-glucopyranosyl ester from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:24028845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"(+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity","synonyms":[{"name":"ABA-GE transmembrane transporter activity","type":"exact"},{"name":"abscisic acid glucosyl ester transmembrane transporter activity","type":"exact"}],"termid":"GO:1902417"}


id: MONDO:0014190
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86252,86253],"is_not":false,"summary":null,"term":"MONDO:0014190"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the ELAC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:369913","GARD:17589","MEDGEN:815856","DOID:0111496","OMIM:615440","UMLS:C3809526"],"synonyms":[{"name":"COXPD17","type":"exact"},{"name":"ELAC2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 17","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in ELAC2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 17","type":"exact"}],"termid":"MONDO:0014190","terms_by_termid":{"MONDO:0014190":null},"xrefs":{"Monarch":{"xref_id":"0014190"}}}


id: SO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region traversing the lipid bilayer.","definition_xrefs":["UniProt:curator_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramembrane_polypeptide_region","termid":"SO:0001075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"transmembrane_polypeptide_region","secondary_identifiers":["BS:00158"],"synonyms":[{"name":"transmem","type":"related"},{"name":"transmembrane","type":"related"},{"name":"transmembrane polypeptide region","type":"exact"}],"termid":"SO:0001077"}


id: GO:0003221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the right cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"},{"relation_name":"part_of","term_name":"cardiac right ventricle morphogenesis","termid":"GO:0003215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right ventricular cardiac muscle tissue morphogenesis","synonyms":[{"name":"right ventricle myocardium morphogenesis","type":"exact"}],"termid":"GO:0003221"}


id: MONDO:0015095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Peters anomaly","termid":"MONDO:0011414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Peters anomaly-cataract syndrome","secondary_identifiers":["MEDGEN:419463","Orphanet:101033","UMLS:C2931652","MESH:C537885"],"termid":"MONDO:0015095","xrefs":{"Monarch":{"xref_id":"0015095"}}}


id: FYPO:0003096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 methylation at centromeric dg repeats during vegetative growth","type":"narrow"},{"name":"decreased histone H3-K9 methylation at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H3-K9 methylation at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased histone H3K9me at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003096"}


id: PBO:0085269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal adenine nucleotide transporter; involved in beta-oxidation of medium-chain fatty acid; required for peroxisome proliferation","termid":"PBO:0085269"}


id: MONDO:0016645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare neoplastic disease (obsolete MONDO:0016645)","secondary_identifiers":["Orphanet:250908"],"termid":"MONDO:0016645","xrefs":{"Monarch":{"xref_id":"0016645"}}}


id: GO:0048731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.","definition_xrefs":["GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"system development","termid":"GO:0048731"}


id: PBO:0082965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; potential Cdc28p substrate; contains a Phox homology (PX) domain and specifically binds phosphatidylinositol 3-phosphate (PtdIns-3-P); YKR078W has a paralog, VPS5, that arose from the whole genome duplication","termid":"PBO:0082965"}


id: MONDO:0007422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratoderma hereditarium mutilans","secondary_identifiers":["OMIM:124500","GARD:3092","Orphanet:494","DOID:0111339","ICD9:757.39","SCTID:24559001","UMLS:C0265964","MEDGEN:78579","MESH:C536457"],"synonyms":[{"name":"KHM","type":"related"},{"name":"PPK mutilans and deafness","type":"exact"},{"name":"VOWNKL","type":"related"},{"name":"Vohwinkel syndrome","type":"exact"},{"name":"deafness, congenital, with KERATOPACHYDERMIA and constrictions of fingers and toes","type":"related"},{"name":"keratoderma hereditarium mutilans","type":"exact"},{"name":"mutilating keratoderma","type":"related"},{"name":"mutilating keratoderma of Vohwinkel","type":"exact"},{"name":"mutilating keratoderma plus deafness","type":"exact"}],"termid":"MONDO:0007422","xrefs":{"Monarch":{"xref_id":"0007422"}}}


id: GO:0018771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2Z,4E)-2-hydroxy-6-oxonona-2,4-dienedioate + H2O = (2Z)-2-hydroxypenta-2,4-dienoate + H+ + succinate.","definition_xrefs":["RHEA:34187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2-hydroxy-6-oxonona-2,4-dienedioate hydrolase activity","secondary_identifiers":["GO:0008680","MetaCyc:MHPCHYDROL-RXN","UM-BBD_reactionID:r0438"],"synonyms":[{"name":"(2E,4Z)-2-hydroxy-6-oxona-2,4-dienedioate succinylhydrolase activity","type":"exact"},{"name":"2-hydroxy-6-ketonona-2,4-dienedoic acid hydrolase activity","type":"exact"}],"termid":"GO:0018771"}


id: GO:0047002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinitol + NAD+ = L-ribulose + H+ + NADH.","definition_xrefs":["EC:1.1.1.13","RHEA:21356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-arabinitol 2-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02441","MetaCyc:1.1.1.13-RXN"],"synonyms":[{"name":"L-arabinitol 2-dehydrogenase (ribulose forming) activity","type":"exact"}],"termid":"GO:0047002"}


id: FYPO:0007510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested at the mitotic G2/M phase transition in the absence of the mitotic DNA replication checkpoint. The previous S phase is completed, no replication intermediates can be observed, and cells do not undergo rereplication.","definition_xrefs":["PomBase:mah","PMID:17690116","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition in absence of mitotic DNA replication checkpoint","synonyms":[{"name":"cell cycle arrest at G2/M phase transition in absence of mitotic DNA replication checkpoint during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition in absence of mitotic DNA replication checkpoint during vegetative growth","type":"exact"},{"name":"mitotic cell cycle arrest at the G2/M transition with completed S phase","type":"related"}],"termid":"FYPO:0007510"}


id: PBO:0056449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3 pseudogene 1","termid":"PBO:0056449"}


id: RO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_potential_to_develop_into","termid":"RO:0002387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_potential_to_directly_develop_into","termid":"RO:0002388"}


id: SO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Different sources report differing sequences.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequencing_information","termid":"SO:0001082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_conflict","secondary_identifiers":["BS:00069"],"synonyms":[{"name":"conflict","type":"exact"}],"termid":"SO:0001085"}


id: PR:O42862
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.02","synonyms":[{"name":"Spom972h-atg14","type":"exact"}],"termid":"PR:O42862"}


id: PBO:0053492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 470","termid":"PBO:0053492"}


id: PBO:0063960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1","termid":"PBO:0063960"}


id: GO:1990465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction a long-chain aldehyde + O2 + 2 NADPH = an alkane + formate + H2O + 2 NADP+.","definition_xrefs":["GOC:mengo_curators","PMID:22947199"],"gene_count":0,"genotype_count":0,"name":"obsolete aldehyde oxygenase (deformylating) activity (obsolete GO:1990465)","termid":"GO:1990465"}


id: PBO:0042388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300H molecule (gene/pseudogene)","termid":"PBO:0042388"}


id: GO:1903933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA primase activity.","definition_xrefs":["PMID:14766746","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA primase activity (obsolete GO:1903933)","synonyms":[{"name":"down regulation of DNA primase activity","type":"exact"},{"name":"down-regulation of DNA primase activity","type":"exact"},{"name":"downregulation of DNA primase activity","type":"exact"},{"name":"inhibition of DNA primase activity","type":"narrow"}],"termid":"GO:1903933"}


id: PR:Q9UTR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- etd1 gene.","definition_xrefs":["UniProtKB:Q9UTR4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation protein etd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.08","synonyms":[{"name":"Spom972h-etd1","type":"exact"}],"termid":"PR:Q9UTR4"}


id: PBO:0084916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Modulator of cell separation and mitotic exit; inhibits separation through Ub-dependent Ace2p proteolysis; part of a daughter-specific switch induced by the mitotic exit network that inhibits exit and resets the cell cycle after the execution of  MEN function, blocking Tem1p and Cdc15 association; required for chromosome stability and multiple mitotic checkpoints; regulated by SCF; haploid transcription regulated by Ste12p; contains 12 degenerate leucine-rich repeat motifs and an atypical F-box","termid":"PBO:0084916"}


id: MONDO:0035383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete FOXG1 syndrome (obsolete MONDO:0035383)","secondary_identifiers":["GARD:12825"],"termid":"MONDO:0035383","xrefs":{"Monarch":{"xref_id":"0035383"}}}


id: FYPO:0002242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable tapered vegetative cell","termid":"FYPO:0002111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable elongated tapered vegetative cell","synonyms":[{"name":"inviable elongated bottle-shaped vegetative cell","type":"exact"},{"name":"inviable elongated bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated bottle/skittle vegetative cell","type":"exact"},{"name":"inviable elongated skittle-shaped vegetative cell","type":"exact"},{"name":"inviable elongated tapered cell during vegetative growth","type":"exact"},{"name":"inviable long tapered vegetative cell","type":"exact"},{"name":"lethal; elongated tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002242"}


id: MONDO:0016924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 4 disorder","termid":"MONDO:0700011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 4","secondary_identifiers":["SCTID:726342002","GARD:20845","MEDGEN:1392317","UMLS:C4518492","Orphanet:262206"],"synonyms":[{"name":"partial duplication of chromosome type 4","type":"exact"},{"name":"partial trisomy of chromosome 4","type":"exact"}],"termid":"MONDO:0016924","xrefs":{"Monarch":{"xref_id":"0016924"}}}


id: PBO:0000829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ryh1","termid":"PBO:0000829"}


id: PBO:0041272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 4","termid":"PBO:0041272"}


id: PBO:0040043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARNT2 divergent transcript","termid":"PBO:0040043"}


id: SO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal locus where complementary lncRNA and associated proteins accumulate at the corresponding lncRNA gene loci to tether homologous chromosome during chromosome pairing at meiosis I.","definition_xrefs":["PMID:31811152","PMID:22582262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"},{"relation_name":"member_of","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous_chromosome_recognition_and_pairing_locus","synonyms":[{"name":"homologous chromosome recognition and pairing locus","type":"exact"}],"termid":"SO:0002233"}


id: PBO:0052011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 1C","termid":"PBO:0052011"}


id: GO:0062141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that functions with the RNA exosome and contributes to the degradation of abberant transcripts.","definition_xrefs":["PMID:29844170","PMID:21855801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear exosome targeting complex","synonyms":[{"name":"NEXT complex","type":"exact"}],"termid":"GO:0062141"}


id: PATO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000859 pinna reflex value (obsolete PATO:0000859)","termid":"PATO:0000859"}


id: PBO:0049705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0049705"}


id: MONDO:1010486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in alpaca.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, alpaca","secondary_identifiers":["OMIA:001041-30538"],"termid":"MONDO:1010486","xrefs":{"Monarch":{"xref_id":"1010486"}}}


id: PBO:0028497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0028497"}


id: GO:0035851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Krueppel-associated box (KRAB) domain of a protein. The approximately 75 amino acid KRAB domain is enriched in charged amino acids, and is found in the N-terminal regions of many zinc finger-containing transcription factors.","definition_xrefs":["InterPro:IPR001909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Krueppel-associated box domain binding","synonyms":[{"name":"KRAB domain binding","type":"exact"},{"name":"Krueppel-associated box binding","type":"exact"}],"termid":"GO:0035851"}


id: PBO:0056481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 3","termid":"PBO:0056481"}


id: MONDO:0012627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing juvenile myclonic epilepsy, idiopathic generalized epilepsy, or childhood absence epilepsy in which the cause of the disease is a mutation in the GABRA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 13","secondary_identifiers":["UMLS:C4013473","MEDGEN:861910","DOID:0111314","OMIM:611136","MESH:C567002"],"synonyms":[{"name":"EIG13","type":"exact"},{"name":"GABRA1 juvenile myoclonic epilepsy","type":"related"},{"name":"epilepsy, childhood absence, susceptibility to, 4","type":"related"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 13","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 13","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 5","type":"related"},{"name":"juvenile myoclonic epilepsy caused by mutation in GABRA1","type":"related"},{"name":"susceptibility to idiopathic generalised epilepsy 13","type":"exact"},{"name":"susceptibility to idiopathic generalized epilepsy 13","type":"exact"}],"termid":"MONDO:0012627","xrefs":{"Monarch":{"xref_id":"0012627"}}}


id: PR:Q9UUI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22F8.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] 100 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.05","synonyms":[{"name":"Spom972h-SPAC22F8.05","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI7"}


id: PBO:0074177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 4","termid":"PBO:0074177"}


id: GO:0004362
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79402],"is_not":false,"summary":null,"term":"GO:0004362"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + NADP+ = glutathione disulfide + NADPH + H+.","definition_xrefs":["RHEA:11740","PMID:36771108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione disulfide oxidoreductase activity","termid":"GO:0015038"},{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0015036"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0015036"],"is_obsolete":false,"name":"glutathione-disulfide reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-3323079","EC:1.8.1.7","MetaCyc:GLUTATHIONE-REDUCT-NADPH-RXN","Reactome:R-HSA-71682"],"synonyms":[{"name":"GSH reductase activity","type":"related"},{"name":"GSSG reductase activity","type":"related"},{"name":"NADPH-GSSG reductase activity","type":"related"},{"name":"NADPH-glutathione reductase activity","type":"related"},{"name":"NADPH:oxidized-glutathione oxidoreductase activity","type":"related"},{"name":"glutathione S-reductase activity","type":"related"},{"name":"glutathione reductase activity","type":"exact"},{"name":"glutathione-disulfide reductase (NADP) activity","type":"exact"},{"name":"glutathione-disulfide reductase activity","type":"exact"},{"name":"glutathione-disulphide reductase activity","type":"exact"},{"name":"glutathione:NADP+ oxidoreductase activity","type":"related"},{"name":"oxidized glutathione reduction","type":"related"}],"termid":"GO:0004362","terms_by_termid":{"GO:0004362":null}}


id: PBO:0067037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 51, pseudogene","termid":"PBO:0067037"}


id: MONDO:0035685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidermolysis bullosa simplex with extracutaneous involvement (obsolete MONDO:0035685)","secondary_identifiers":["Orphanet:595351"],"synonyms":[{"name":"EBS with extracutaneous involvement","type":"exact"}],"termid":"MONDO:0035685","xrefs":{"Monarch":{"xref_id":"0035685"}}}


id: PBO:0005742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssa2 (predicted)","termid":"PBO:0005742"}


id: PBO:0090055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA complex subunit, Armadillo-type fold Tti1","termid":"PBO:0090055"}


id: PATO:0001146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001146 resistance value (obsolete PATO:0001146)","termid":"PATO:0001146"}


id: PBO:0053387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 314","termid":"PBO:0053387"}


id: PBO:0068866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 106, pseudogene","termid":"PBO:0068866"}


id: PBO:0084645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule plus-end-tracking non-motor protein; binds to MTs, stabilizing interpolar MT plus ends, facilitating polymerization of spindle MTs and producing an outward force on spindle poles; required for structural integrity of the mitotic spindle; binds detached kinetochores (KTs) and promotes capture; relocalizes to MTs and stabilizes the spindle once captured KTs reach a spindle pole; localizes to the spindle, spindles poles, and detached KTs; CLASP family member homologous to human CLASP1/2","termid":"PBO:0084645"}


id: FYPO:0006487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4-bisphosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-3,4-bisphosphate level","synonyms":[{"name":"increased cellular 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate level","type":"exact"},{"name":"increased cellular PI(3,4)P2 level","type":"exact"},{"name":"increased cellular phosphatidylinositol-3,4-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylinositol-3,4-bisphosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006487"}


id: MONDO:1012470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pentalogy of Fallot, non-human animal","termid":"MONDO:1011650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentalogy of Fallot, horse","secondary_identifiers":["OMIA:001857-9796"],"termid":"MONDO:1012470","xrefs":{"Monarch":{"xref_id":"1012470"}}}


id: GO:0039675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or a viral particle out of the host cell nucleus through the nuclear pore.","definition_xrefs":["PMID:12921991","VZ:1953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus through nuclear pore","synonyms":[{"name":"exit of virus from host cell nucleus through nuclear pore complex","type":"exact"},{"name":"nuclear pore exit of virus","type":"exact"},{"name":"viral enome export through nuclear pore","type":"exact"}],"termid":"GO:0039675"}


id: PBO:0029742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spherical_cell","termid":"PBO:0029742"}


id: PATO:0001229
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color saturation which is of high purity.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color saturation","termid":"PATO:0000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high saturation","synonyms":[{"name":"bright ","type":"exact"},{"name":"vivid","type":"related"}],"termid":"PATO:0001229"}


id: PBO:0047995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member L, pseudogene","termid":"PBO:0047995"}


id: PBO:0083408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR364C-A","termid":"PBO:0083408"}


id: MONDO:0014523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile-onset diabetes mellitus-central and peripheral neurodegeneration syndrome","secondary_identifiers":["MEDGEN:863873","OMIM:616192","GARD:17768","Orphanet:445062","UMLS:C4015436"],"synonyms":[{"name":"ACPHD","type":"related"},{"name":"ataxia, combined cerebellar and peripheral, with hearing loss and diabetes mellitus","type":"related"},{"name":"combined cerebellar and peripheral ataxia-hearing loss-diabetes mellitus syndrome","type":"exact"}],"termid":"MONDO:0014523","xrefs":{"Monarch":{"xref_id":"0014523"}}}


id: PBO:0005332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human Leydig cell tumor 10 kDa protein homolog","termid":"PBO:0005332"}


id: MONDO:0012027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, susceptibility to, 2","secondary_identifiers":["MEDGEN:331217","OMIM:608391","UMLS:C1842113"],"synonyms":[{"name":"AIS2","type":"exact"},{"name":"autoimmune disease susceptibility locus, chromosome 7-related","type":"related"},{"name":"autoimmune disease, susceptibility to, 2","type":"exact"},{"name":"vitiligo-associated multiple autoimmune disease susceptibility 3","type":"related"}],"termid":"MONDO:0012027","xrefs":{"Monarch":{"xref_id":"0012027"}}}


id: PBO:0066993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 296","termid":"PBO:0066993"}


id: PR:O94354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An argininosuccinate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.05c","secondary_identifiers":["UniProtKB:O94354"],"synonyms":[{"name":"Spom972h-ASS1","type":"exact"},{"name":"citrulline--aspartate ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94354"}


id: FYECO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cells are grown in a culture, and wild-type cells of the opposite mating type are added to the culture.","definition_xrefs":["PMID:30279276","PomBase:mah","PomBase:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wild type cells of opposite mating type added to culture","synonyms":[{"name":"mating with WT","type":"related"}],"termid":"FYECO:0000383"}


id: PBO:0038659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrosin binding protein","termid":"PBO:0038659"}


id: PBO:0061327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B5","termid":"PBO:0061327"}


id: GO:0007165
data:
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id: PBO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.2.-","termid":"PBO:0002003"}


id: PBO:0027070
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_phenotype","termid":"PBO:0027070"}


id: PBO:0003330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC-8 DNA repair homolog","termid":"PBO:0003330"}


id: GO:0034831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-1,2,3,4-tetrahydronaphthol = 1,2,3,4-tetrahydronaphthalone + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete (R)-(-)-1,2,3,4-tetrahydronaphthol dehydrogenase activity (obsolete GO:0034831)","termid":"GO:0034831"}


id: PBO:0084180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone; involved in regulation of chromatin structure in both transcribed and silenced chromosomal regions; affects transcriptional elongation; has a role in regulation of Ty1 transposition; interacts physically and functionally with Chromatin Assembly Factor-1 (CAF-1)","termid":"PBO:0084180"}


id: MONDO:0017631
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of gallbladder and extrahepatic biliary tract (obsolete MONDO:0017631)","secondary_identifiers":["Orphanet:306633"],"synonyms":[{"name":"rare tumor of gallbladder and EBT","type":"exact"}],"termid":"MONDO:0017631","xrefs":{"Monarch":{"xref_id":"0017631"}}}


id: GO:0002184
data:
  {"annotated_genes":["SJAG_01696","SJAG_02601","SJAG_02812","SJAG_03949","SJAG_04283","SJAG_00338","SJAG_02189","SJAG_05265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74152,95132,96804,107495,109485,109486,116357,117825],"is_not":false,"summary":null,"term":"GO:0002184"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome in the cytoplasm, usually in response to a termination codon.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational termination","termid":"GO:0006415"},{"relation_name":"part_of","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00338":null,"SJAG_01696":null,"SJAG_02189":null,"SJAG_02601":null,"SJAG_02812":null,"SJAG_03949":null,"SJAG_04283":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic translational termination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0002184","terms_by_termid":{"GO:0002184":null}}


id: PBO:0051612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 36 beta","termid":"PBO:0051612"}


id: GO:0050342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-tocopherol + S-adenosyl-L-methionine = (+)-alpha-tocopherol + H+ + S-adenosyl-L-homocysteine. This reaction can also use delta-tocopherol, gamma-tocotrienol and delta-tocotrienol as substrates.","definition_xrefs":["EC:2.1.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"tocopherol C-methyltransferase activity","secondary_identifiers":["MetaCyc:TOCOPHEROL-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:gamma-tocopherol 5-O-methyltransferase activity","type":"related"},{"name":"gamma-tocopherol methyltransferase activity","type":"exact"},{"name":"tocopherol O-methyltransferase activity","type":"exact"}],"termid":"GO:0050342"}


id: PBO:0113486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonyl-tRNA synthetase involved in tRNA aminoacylation; mRNA binding protein that preferentially binds to the mRNA of RNAPI subunits and DNA binding proteins; binds to an anticodon stem loop-like structure in RPC10 and impacts its translation; cytoplasmic protein; human homolog TARS can complement a yeast null mutant","termid":"PBO:0113486"}


id: GO:0014841
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of satellite cells, resulting in the expansion of the cell population. Satellite cells are quiescent cells that are located between the basal lamina and the plasmalemma of the muscle fiber, which are the main contributors to postnatal muscle growth. In adult muscle, satellite cells become activated to divide and differentiate in response to muscle damage.","definition_xrefs":["PMID:16607119","GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell proliferation","termid":"GO:0014841"}


id: PBO:0039447
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and kinase domain containing 1","termid":"PBO:0039447"}


id: GO:0001698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid induced by the interaction of gastrin with its receptor.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}


id: PBO:0049434
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 11","termid":"PBO:0049434"}


id: MONDO:0012298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele, diaphragmatic hernia, and radial ray defects","secondary_identifiers":["MESH:C563701","UMLS:C1836007","OMIM:609545","MEDGEN:332105"],"synonyms":[{"name":"Gershoni-Baruch syndrome","type":"related"},{"name":"omphalocele, diaphragmatic hernia, and radial ray defects","type":"exact"}],"termid":"MONDO:0012298","xrefs":{"Monarch":{"xref_id":"0012298"}}}


id: GO:0070446
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte progenitor proliferation","termid":"GO:0070445"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte progenitor proliferation","termid":"GO:0070444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte progenitor proliferation","synonyms":[{"name":"negative regulation of oligodendrocyte precursor proliferation","type":"exact"}],"termid":"GO:0070446"}


id: MONDO:0700202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bunyaviridae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bunyaviridae infectious disease, non-human animal","termid":"MONDO:0700202","xrefs":{"Monarch":{"xref_id":"0700202"}}}


id: MONDO:0009356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of humeroradial synostosis (disease).","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"humeroradial synostosis","termid":"MONDO:0007737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"autosomal recessive humeroradial synostosis","secondary_identifiers":["MEDGEN:343467","UMLS:C1856055","OMIM:236400"],"synonyms":[{"name":"autosomal recessive humeroradial synostosis (disease)","type":"exact"},{"name":"humeroradial synostosis","type":"related"},{"name":"humeroradial synostosis (disease), autosomal recessive","type":"exact"},{"name":"humeroradial/multiple synostosis syndrome","type":"related"}],"termid":"MONDO:0009356","xrefs":{"Monarch":{"xref_id":"0009356"}}}


id: PBO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by stress","termid":"PBO:0001412"}


id: GO:0052598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histamine + O2 = H2O2 + imidazole-4-acetaldehyde + NH4+.","definition_xrefs":["RHEA:25625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"histamine oxidase activity","secondary_identifiers":["Reactome:R-HSA-5696131","KEGG_REACTION:R02150","MetaCyc:RXN-9600"],"synonyms":[{"name":"1H-Imidazole-4-ethanamine oxidase activity","type":"exact"},{"name":"1H-Imidazole-4-ethanamine:oxygen oxidoreductase (deaminating) activity","type":"exact"},{"name":"histamine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052598"}


id: GO:0043175
data:
  {"annotated_genes":["SJAG_04933","SJAG_00483","SJAG_01610","SJAG_01151","SJAG_02898","SJAG_04353","SJAG_03118","SJAG_00139","SJAG_02203","SJAG_01744","SJAG_00448"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67616],"is_not":false,"summary":null,"term":"GO:0043175"},{"annotations":[71751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001042"},{"annotations":[65295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[72861,78403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[76555,78961,72556,71336,78972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[74045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000994"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase core enzyme, containing a specific subunit composition defined as the core enzyme.","definition_xrefs":["GOC:jl","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase binding","termid":"GO:0070063"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01744":null,"SJAG_02203":null,"SJAG_02898":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"RNA polymerase core enzyme binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0043175","terms_by_termid":{"GO:0000993":null,"GO:0000994":null,"GO:0001042":null,"GO:0043175":null,"GO:0099122":null,"GO:1990269":null}}


id: GO:0045700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spermatid nuclear differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of nucleus organization","termid":"GO:1903353"},{"relation_name":"regulates","term_name":"spermatid nucleus differentiation","termid":"GO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spermatid nuclear differentiation","termid":"GO:0045700"}


id: GO:0090207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol.","definition_xrefs":["GOC:sl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"regulates","term_name":"triglyceride metabolic process","termid":"GO:0006641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of triglyceride metabolic process","termid":"GO:0090207"}


id: FYPO:0000757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nigericin. Cells stop growing (and may die) at a concentration of nigericin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to nigericin","synonyms":[{"name":"hypersensitive to nigericin","type":"exact"},{"name":"sensitive to nigericin during mitotic cell cycle","type":"related"},{"name":"sensitive to nigericin during vegetative growth","type":"exact"}],"termid":"FYPO:0000757"}


id: MONDO:0001347
data:
  {"annotated_genes":["SJAG_02396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008030"}]},"cv_name":"mondo","definition":"An autosomal dominant disorder affecting the skeletal muscles of the face, scapula, and upper arm. Patients present with muscle weakness in these anatomic areas. The muscle weakness eventually spreads to other skeletal muscles as well.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0019303"],"is_obsolete":false,"name":"facioscapulohumeral muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10064087","MESH:D020391","NANDO:2200859","OMIMPS:158900","SCTID:399091004","NANDO:1200491","icd11.foundation:621965073","NORD:1116","UMLS:C0238288","NCIT:C84704","Orphanet:269","GARD:9941","MEDGEN:65956","DOID:11727"],"synonyms":[{"name":"FSH dystrophy","type":"exact"},{"name":"FSHD","type":"exact"},{"name":"Landouzy Dejerine muscular dystrophy","type":"exact"},{"name":"Landouzy-Dejerine muscular dystrophy","type":"exact"},{"name":"Landouzy-Dejerine myopathy","type":"exact"},{"name":"facioscapulohumeral dystrophy","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy","type":"exact"},{"name":"facioscapulohumeral myopathy","type":"exact"},{"name":"muscular dystrophy, Landouzy-Dejerine","type":"exact"}],"termid":"MONDO:0001347","terms_by_termid":{"MONDO:0008030":null},"xrefs":{"Monarch":{"xref_id":"0001347"}}}


id: PBO:0089336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, pyruvate Mpc1","termid":"PBO:0089336"}


id: PBO:0111426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo6","termid":"PBO:0111426"}


id: GO:0023018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which signal transmission via a diffusible molecule is initiated by a T cell.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete T cell activation of signal transmission via diffusible molecule (obsolete GO:0023018)","synonyms":[{"name":"T cell activation of signal transmission via diffusible molecule","type":"exact"}],"termid":"GO:0023018"}


id: MONDO:0013798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 16","termid":"MONDO:0016914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16q22 deletion syndrome","secondary_identifiers":["MEDGEN:482782","OMIM:614541","Orphanet:658540","UMLS:C3281152","DOID:0060401"],"synonyms":[{"name":"chromosome 16q22 deletion syndrome","type":"exact"},{"name":"chromosome 16q22 deletion syndrome, isolated cases","type":"exact"}],"termid":"MONDO:0013798","xrefs":{"Monarch":{"xref_id":"0013798"}}}


id: PBO:0005087
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C promoter element Binding Factor","termid":"PBO:0005087"}


id: GO:0051212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vanadium ion (V).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"vanadium ion binding","synonyms":[{"name":"V ion binding","type":"exact"}],"termid":"GO:0051212"}


id: MONDO:0019712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete patellar dysostosis (obsolete MONDO:0019712)","secondary_identifiers":["Orphanet:93455"],"termid":"MONDO:0019712","xrefs":{"Monarch":{"xref_id":"0019712"}}}


id: PBO:0049794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietic cell-specific Lyn substrate 1","termid":"PBO:0049794"}


id: PBO:0085114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleocytoplasmic shuttling assembly chaperone; co-translationally associates with nascent Rps3p in the cytoplasm and delivers it to pre-ribosomal subunits in the nucleus; required for 40S ribosomal subunit nuclear export, biogenesis and adaptation to osmotic and oxidative stress;  contains ankyrin-repeats; expression repressed by heat shock","termid":"PBO:0085114"}


id: PBO:0042379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD226 molecule","termid":"PBO:0042379"}


id: GO:0006528
data:
  {"annotated_genes":["SJAG_02276","SJAG_02832","SJAG_04549"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72731],"is_not":false,"summary":null,"term":"GO:0006528"},{"annotations":[111120,102480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02276":null,"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"asparagine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ASPARAGINESYN-PWY"],"synonyms":[{"name":"asparagine metabolism","type":"exact"}],"termid":"GO:0006528","terms_by_termid":{"GO:0006528":null,"GO:0070981":null}}


id: PBO:0085759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in response to oxidative and osmotic stress; identified as suppressor of S. pombe cell cycle checkpoint mutations; similar to CaM (calmodulin) kinases; RCK2 has a paralog, RCK1, that arose from the whole genome duplication","termid":"PBO:0085759"}


id: PBO:0005887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Phenylalanine, mitochondrial","termid":"PBO:0005887"}


id: MONDO:0015922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete channelopathy with epilepsy (obsolete MONDO:0015922)","secondary_identifiers":["Orphanet:182083"],"termid":"MONDO:0015922","xrefs":{"Monarch":{"xref_id":"0015922"}}}


id: FYPO:0002505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification","termid":"FYPO:0002498"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein palmitoylation","synonyms":[{"name":"reduced protein palmitoylation","type":"exact"}],"termid":"FYPO:0002505"}


id: PBO:0046004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1B","termid":"PBO:0046004"}


id: PBO:0084831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for translation of the COB mRNA; forms a complex with Cbp3p that binds to mt ribosomes near the polypeptide tunnel exit and promotes efficient translation of the COB mRNA; Cbp3p-Cbp6p complex also interacts with newly synthesized cytochrome b (Cobp) and Cbp4p to promote assembly of Cobp into the cytochrome bc1 complex; Cbp3p-Cbp6p complex is sequestered if assembly of Complex III is blocked, downregulating COB mRNA translation","termid":"PBO:0084831"}


id: GO:0021519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an association neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord association neuron specification","termid":"GO:0021519"}


id: MONDO:0015493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"lipoatrophy with diabetes, leukomelanodermic papules, liver steatosis, and hypertrophic cardiomyopathy","secondary_identifiers":["Orphanet:156156"],"termid":"MONDO:0015493","xrefs":{"Monarch":{"xref_id":"0015493"}}}


id: GO:0022886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables transport of a solute across a membrane. This kind of transporter interacts much more weakly with the solute than the carrier does. It is an aqueous pore that extends across the membrane. It may change from closed to open and back. It transports faster than a carrier. It is always passive.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"channel-forming ionophore activity","synonyms":[{"name":"ionophore activity","type":"broad"}],"termid":"GO:0022886"}


id: GO:0140786
data:
  {"annotated_genes":["SJAG_03405"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113192],"is_not":false,"summary":null,"term":"GO:0140786"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of glutamine.","definition_xrefs":["PMID:34535752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid sensor activity","termid":"GO:0140785"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03405":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140299","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"glutamine sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutamine sensing activity","type":"exact"}],"termid":"GO:0140786","terms_by_termid":{"GO:0140786":null}}


id: PBO:0050274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 4","termid":"PBO:0050274"}


id: GO:0099023
data:
  {"annotated_genes":["SJAG_04966","SJAG_03357","SJAG_02811","SJAG_02315","SJAG_03963","SJAG_04960","SJAG_03158","SJAG_02525","SJAG_04902","SJAG_00204","SJAG_00578","SJAG_04837","SJAG_01415","SJAG_00380","SJAG_03938","SJAG_04956","SJAG_05194","SJAG_03054","SJAG_00820","SJAG_04618","SJAG_01598","SJAG_04358","SJAG_00041","SJAG_01071","SJAG_01645","SJAG_03467","SJAG_03864","SJAG_02211","SJAG_01166","SJAG_03663","SJAG_01459","SJAG_05184","SJAG_04021","SJAG_01772","SJAG_01925","SJAG_02753","SJAG_02166","SJAG_02750","SJAG_03005","SJAG_04044","SJAG_02320","SJAG_02655","SJAG_00850"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90498,100628,117221,69861,72190,118756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033263"},{"annotations":[100341,76958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070939"},{"annotations":[57432,63229,76759,77717,67551,76347,72965,91069,71087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000145"},{"annotations":[79965,70319,79030,97463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000938"},{"annotations":[89284,69964,117161,75661,109816,70694,77690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017119"},{"annotations":[88982,99422,102846,75402,89666,110147,97625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990070"},{"annotations":[75403,99423,103693,71894,89667,102847,100083,97626,88983,110148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990071"},{"annotations":[77996,73581,88984,97627,99424,75404,110149,102848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990072"},{"annotations":[80513,77452,75428,71584,94638,104959,80139,71500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902500"}]},"cv_name":"cellular_component","definition":"Any protein complex that plays a role in vesicle tethering.","definition_xrefs":["GOC:dos","GOC:vw","PMID:27243008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00578":null,"SJAG_00820":null,"SJAG_00850":null,"SJAG_01071":null,"SJAG_01166":null,"SJAG_01415":null,"SJAG_01459":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02211":null,"SJAG_02315":null,"SJAG_02320":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_03005":null,"SJAG_03054":null,"SJAG_03158":null,"SJAG_03357":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03963":null,"SJAG_04021":null,"SJAG_04044":null,"SJAG_04358":null,"SJAG_04618":null,"SJAG_04837":null,"SJAG_04902":null,"SJAG_04956":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_05184":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"vesicle tethering complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0099023","terms_by_termid":{"GO:0000145":null,"GO:0000938":null,"GO:0017119":null,"GO:0033263":null,"GO:0070939":null,"GO:1902500":null,"GO:1990070":null,"GO:1990071":null,"GO:1990072":null}}


id: GO:0030941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloroplast targeting sequence, a specific peptide sequence that acts as a signal to localize the protein within the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005048"],"is_obsolete":false,"name":"chloroplast targeting sequence binding","termid":"GO:0030941"}


id: GO:0080116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of glucuronate to the xylan backbone of glucuronoxylan molecule.","definition_xrefs":["PMID:18980649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"glucuronoxylan glucuronosyltransferase activity","termid":"GO:0080116"}


id: FYPO:0000734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the structure of the meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle","termid":"FYPO:0000120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000002","FYPO:0001985","FYPO:0000120"],"is_obsolete":false,"name":"abnormal meiotic spindle","termid":"FYPO:0000734"}


id: GO:1902189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-methylbutanoyl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:15574432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-methylbutanoyl-CoA(4-) metabolic process","synonyms":[{"name":"2-methylbutanoyl-CoA(4-) metabolism","type":"exact"}],"termid":"GO:1902189"}


id: MONDO:0859245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 32","secondary_identifiers":["UMLS:C5676978","MEDGEN:1802496","OMIM:619862","DOID:0070413"],"termid":"MONDO:0859245","xrefs":{"Monarch":{"xref_id":"0859245"}}}


id: GO:0051447
data:
  {"annotated_genes":["SJAG_01330","SJAG_01680","SJAG_04259","SJAG_03438","SJAG_01082","SJAG_04280","SJAG_03327","SJAG_02771","SJAG_03854","SJAG_00364","SJAG_01837","SJAG_04287","SJAG_00266","SJAG_04126","SJAG_01515","SJAG_02481","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116710],"is_not":false,"summary":null,"term":"GO:0051447"},{"annotations":[106644,114826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[91753,106940,116387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[89382,114588,106941,116388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[75727,116998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[111528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[70942,78812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[99015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[108289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[114117],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[101659],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the meiotic cell cycle.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle","termid":"GO:0045786"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"meiotic cell cycle","termid":"GO:0051321"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_02481":null,"SJAG_02771":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_03854":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of progression through meiotic cell cycle","type":"exact"},{"name":"down-regulation of progression through meiotic cell cycle","type":"exact"},{"name":"downregulation of progression through meiotic cell cycle","type":"exact"},{"name":"inhibition of progression through meiotic cell cycle","type":"narrow"},{"name":"negative regulation of meiotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through meiotic cell cycle","type":"exact"}],"termid":"GO:0051447","terms_by_termid":{"GO:0033315":null,"GO:0033316":null,"GO:0045128":null,"GO:0051447":null,"GO:0051598":null,"GO:0075297":null,"GO:0110031":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PR:O74999
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.02","synonyms":[{"name":"RAD7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rhp7","type":"exact"}],"termid":"PR:O74999"}


id: PBO:0059771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 45","termid":"PBO:0059771"}


id: PBO:0040071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin beta 2","termid":"PBO:0040071"}


id: MONDO:0014076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal dominant mutation of RTEL1 on chromosome 20q13.33.","definition_xrefs":["DOID:0070020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dyskeratosis congenita and related telomere biology disorder","termid":"MONDO:0800467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 5","secondary_identifiers":["DOID:0070022","GARD:15917","MEDGEN:767570","OMIM:615190","UMLS:C3554656","NCIT:C176928"],"synonyms":[{"name":"DKCB5","type":"exact"},{"name":"autosomal recessive dyskeratosis congenita 5","type":"related"},{"name":"dyskeratosis congenita, autosomal dominant 4","type":"related"},{"name":"dyskeratosis congenita, autosomal recessive 5","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive type 5","type":"exact"}],"termid":"MONDO:0014076","xrefs":{"Monarch":{"xref_id":"0014076"}}}


id: PBO:0073248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 2","termid":"PBO:0073248"}


id: PBO:0016967
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin Related Protein","termid":"PBO:0016967"}


id: MONDO:0044324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Al Kaissi syndrome is an autosomal recessive developmental disorder characterized by growth retardation, spine malformation, particularly of the cervical spine, dysmorphic facial features, and delayed psychomotor development with moderate to severe intellectual disability (summary by {1:Windpassinger et al., 2017}).","definition_xrefs":["OMIM:617694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Al Kaissi syndrome","secondary_identifiers":["MEDGEN:1611968","UMLS:C4540156"],"synonyms":[{"name":"AL KAISSI syndrome","type":"related"},{"name":"ALKAS","type":"related"},{"name":"Growth retardation, spine malformation, dysmorphic facies, and developmental delay","type":"related"}],"termid":"MONDO:0044324","xrefs":{"Monarch":{"xref_id":"0044324"}}}


id: PR:Q09787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G6.09 gene.","definition_xrefs":["UniProtKB:Q09787","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.09","synonyms":[{"name":"Spom972h-SPAC13G6.09","type":"exact"}],"termid":"PR:Q09787"}


id: PBO:0074960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-2","termid":"PBO:0074960"}


id: PBO:0082987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic asparaginyl-tRNA synthetase; required for protein synthesis, catalyzes the specific attachment of asparagine to its cognate tRNA","termid":"PBO:0082987"}


id: PBO:0042554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 17","termid":"PBO:0042554"}


id: PBO:0042047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 103","termid":"PBO:0042047"}


id: MOD:01762
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01762"}


id: FYPO:0002715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, and structure the Golgi apparatus is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal Golgi apparatus morphology","synonyms":[{"name":"normal Golgi apparatus morphology during mitotic cell cycle","type":"related"},{"name":"normal Golgi apparatus morphology during vegetative growth","type":"exact"},{"name":"normal Golgi morphology","type":"exact"}],"termid":"FYPO:0002715"}


id: PATO:0000647
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's undergoing unprogrammed cell death.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Necrotic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotic","termid":"PATO:0000647"}


id: MONDO:0016589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive cerebello-cerebral atrophy (obsolete MONDO:0016589)","secondary_identifiers":["Orphanet:247198"],"synonyms":[{"name":"PCCA","type":"exact"}],"termid":"MONDO:0016589","xrefs":{"Monarch":{"xref_id":"0016589"}}}


id: GO:0075275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of a telium, which is a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telium development","termid":"GO:0075275"}


id: PBO:0039413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 16","termid":"PBO:0039413"}


id: PBO:0059456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 7","termid":"PBO:0059456"}


id: PBO:0030176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_aseptate_cell","termid":"PBO:0030176"}


id: MONDO:0007296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 31 (SCA31) is a very rare subtype of autosomal dominant cerebellar ataxia type III (ADCA type III) characterized by the late-onset of cerebral ataxia, dysarthria and horizontal gaze nystagmus, and that is occasionally accompanied by pyramidal signs, tremor, decreased vibration sense and hearing difficulties.","definition_xrefs":["Orphanet:217012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 31","secondary_identifiers":["MEDGEN:348439","NANDO:1200044","DOID:0050980","NCIT:C176901","OMIM:117210","GARD:9975","MESH:C566146","UMLS:C1861736","SCTID:715826005","icd11.foundation:250956064"],"synonyms":[{"name":"SCA31","type":"exact"},{"name":"spinocerebellar ataxia 16q22-linked","type":"related"},{"name":"spinocerebellar ataxia 31","type":"related"},{"name":"spinocerebellar ataxia type 31","type":"exact"},{"name":"spinocerebellar ataxia, 16Q22-linked","type":"related"}],"termid":"MONDO:0007296","xrefs":{"Monarch":{"xref_id":"0007296"}}}


id: PBO:0058601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6733","termid":"PBO:0058601"}


id: MONDO:0008045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy-progressive myoclonic epilepsy syndrome is characterized by hereditary myoclonus and progressive distal muscular atrophy. Less than 10 cases have been reported. Treatment with clonazepam results in complete and lasting improvement of the myoclonus.","definition_xrefs":["Orphanet:2590"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"variable-age onset epilepsy syndrome","termid":"MONDO:0100036"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"ASAH1-related sphingolipidosis","termid":"MONDO:0100524"},{"relation_name":"is_a","term_name":"ASAH1-related disorders","termid":"MONDO:0800460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"spinal muscular atrophy-progressive myoclonic epilepsy syndrome","secondary_identifiers":["MEDGEN:371854","SCTID:703524005","DOID:0111527","GARD:3875","OMIM:159950","ICD9:345.10","UMLS:C1834569","MESH:C537563"],"synonyms":[{"name":"Jankovic Rivera syndrome","type":"related"},{"name":"Jankovic-Rivera syndrome","type":"exact"},{"name":"SMAPME","type":"related"},{"name":"hereditary myoclonus and progressive distal muscular atrophy","type":"related"},{"name":"hereditary myoclonus-progressive distal muscular atrophy syndrome","type":"exact"},{"name":"myoclonus hereditary progressive distal muscular atrophy","type":"related"},{"name":"myoclonus, hereditary, with progressive distal muscular atrophy","type":"related"},{"name":"spinal muscular atrophy with progressive myoclonic epilepsy","type":"related"}],"termid":"MONDO:0008045","xrefs":{"Monarch":{"xref_id":"0008045"}}}


id: GO:0042670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell differentiation","termid":"GO:0042670"}


id: MONDO:0013989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the KCNT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 14","secondary_identifiers":["OMIM:614959","DOID:0080439","GARD:15886","MEDGEN:767109","UMLS:C3554195"],"synonyms":[{"name":"DEE14","type":"exact"},{"name":"EIEE14","type":"exact"},{"name":"KCNT1 early infantile epileptic encephalopathy","type":"exact"},{"name":"KCNT1-related epilepsy","type":"broad"},{"name":"developmental and epileptic encephalopathy 14","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in KCNT1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 14","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 14","type":"exact"}],"termid":"MONDO:0013989","xrefs":{"Monarch":{"xref_id":"0013989"}}}


id: PBO:0086733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene","termid":"PBO:0086733"}


id: PBO:0080071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 35","termid":"PBO:0080071"}


id: GO:0140383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxytryptamine + ATP = 4-hydoxytryptamine 4-phosphate + ADP + H+.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"4-hydroxytryptamine kinase activity","secondary_identifiers":["EC:2.7.1.222","RHEA:55564"],"termid":"GO:0140383"}


id: PBO:0055833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 3","termid":"PBO:0055833"}


id: PBO:0025533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-C ortholog Cnp3","termid":"PBO:0025533"}


id: PBO:0031842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endoplasmic_reticulum_morphology","termid":"PBO:0031842"}


id: GO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of S-methylmethionine from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"S-methylmethionine transmembrane transporter activity","secondary_identifiers":["GO:0015178"],"synonyms":[{"name":"S-methylmethionine permease activity","type":"exact"},{"name":"S-methylmethionine transporter activity","type":"broad"}],"termid":"GO:0000100"}


id: PBO:0049216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP1 associated protein 1","termid":"PBO:0049216"}


id: FYPO:0005975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lithium ion export from the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal lithium export","synonyms":[{"name":"normal lithium export during mitotic cell cycle","type":"related"},{"name":"normal lithium export during vegetative growth","type":"exact"},{"name":"normal lithium export from cell","type":"exact"},{"name":"normal lithium ion export from cell","type":"exact"}],"termid":"FYPO:0005975"}


id: GO:0036017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an erythropoietin stimulus. Erythropoietin is a glycoprotein hormone that controls erythropoiesis.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to erythropoietin","termid":"GO:0036017"}


id: PBO:0041888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated auxiliary subunit delta","termid":"PBO:0041888"}


id: PBO:0050331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 33","termid":"PBO:0050331"}


id: PBO:0054087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1440","termid":"PBO:0054087"}


id: PBO:0055026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2441","termid":"PBO:0055026"}


id: MONDO:0040922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"latent syphilis","termid":"MONDO:0005822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent early syphilis","secondary_identifiers":["icd11.foundation:1768103550","UMLS:C0275842","SCTID:186867005","MEDGEN:546880"],"synonyms":[{"name":"latent early syphilis","type":"exact"}],"termid":"MONDO:0040922","xrefs":{"Monarch":{"xref_id":"0040922"}}}


id: PBO:0055351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2780","termid":"PBO:0055351"}


id: PBO:0078809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 26-1","termid":"PBO:0078809"}


id: SO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where copies of a feature are decreased relative to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_change","termid":"SO:0001563"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_decrease","synonyms":[{"name":"copy number decrease","type":"exact"}],"termid":"SO:0001912"}


id: PBO:0072248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 23","termid":"PBO:0072248"}


id: GO:0045069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral genome replication","termid":"GO:0045069"}


id: PBO:0027306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_tRNA_genes","termid":"PBO:0027306"}


id: GO:0010662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death.","definition_xrefs":["GOC:tb","GOC:mtg_apoptosis","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell apoptotic process","termid":"GO:0010660"},{"relation_name":"regulates","term_name":"striated muscle cell apoptotic process","termid":"GO:0010658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle cell apoptotic process","synonyms":[{"name":"regulation of striated muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010662"}


id: GO:0008875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gluconate dehydrogenase activity","termid":"GO:0008875"}


id: GO:0046921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->6) linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"alpha-(1->6)-fucosyltransferase activity","synonyms":[{"name":"alpha(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,6-fucosyltransferase activity","type":"exact"}],"termid":"GO:0046921"}


id: GO:0018584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,5-trichlorophenoxyacetic acid + 1/2 O2 = glyoxylate + 2,4,5-trichlorophenol.","definition_xrefs":["UM-BBD_reactionID:r0359"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,5-trichlorophenoxyacetic acid oxygenase activity (obsolete GO:0018584)","termid":"GO:0018584"}


id: PBO:0050400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 1","termid":"PBO:0050400"}


id: FYPO:0007821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which vacuoles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology","termid":"FYPO:0002257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"large vacuoles","synonyms":[{"name":"enlarged vacuoles","type":"exact"}],"termid":"FYPO:0007821"}


id: PBO:0029023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constitutive_protein_kinase_activity","termid":"PBO:0029023"}


id: MONDO:0009569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hennekam-Beemer syndrome is characterized by the association of skin mastocytosis (appearing as diffuse pigmentation), short stature, microcephaly, conductive hearing loss, and dysmorphic features. It has been described in only two (female) cases: one with normal mental development born to consanguineous parents and the other with severe psychomotor retardation born to unrelated parents. The mode of inheritance is most likely autosomal recessive.","definition_xrefs":["Orphanet:2135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hennekam-Beemer syndrome","secondary_identifiers":["OMIM:248910","SCTID:722453009","UMLS:C3151493","MESH:C536033","GARD:3409","ICD10CM:Q82.2","MEDGEN:462843"],"synonyms":[{"name":"Hennekam Beemer syndrome","type":"related"},{"name":"cutaneous mastocytosis, conductive hearing loss and microtia","type":"related"},{"name":"mastocytosis cutaneous with short stature conductive hearing loss and microtia","type":"related"},{"name":"mastocytosis-short stature-hearing loss syndrome","type":"exact"},{"name":"skin mastocytosis hearing loss microcephaly mild dysmorphic features and severe intellectual disability","type":"related"},{"name":"skin mastocytosis hearing loss microcephaly mild dysmorphic features and severe mental retardation","type":"related"}],"termid":"MONDO:0009569","xrefs":{"Monarch":{"xref_id":"0009569"}}}


id: PBO:0028114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snoRNA_guided_rRNA_2'-O-methylation_abolished_at_specific_site","termid":"PBO:0028114"}


id: GO:0009070
data:
  {"annotated_genes":["SJAG_02791","SJAG_04305","SJAG_00582","SJAG_02972","SJAG_03152","SJAG_00234","SJAG_02313","SJAG_04449","SJAG_02450","SJAG_01766","SJAG_00881","SJAG_01880","SJAG_03914"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76482,73015,77840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[110834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019343"},{"annotations":[72324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[73715,72476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[71463,116112,73981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[110835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[80021,117239,61076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00582":null,"SJAG_00881":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_02313":null,"SJAG_02450":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03914":null,"SJAG_04305":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"serine family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid anabolism","type":"exact"},{"name":"serine family amino acid biosynthesis","type":"exact"},{"name":"serine family amino acid formation","type":"exact"},{"name":"serine family amino acid synthesis","type":"exact"}],"termid":"GO:0009070","terms_by_termid":{"GO:0006535":null,"GO:0006545":null,"GO:0006564":null,"GO:0009090":null,"GO:0019264":null,"GO:0019343":null,"GO:0071269":null}}


id: PBO:0072275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 4","termid":"PBO:0072275"}


id: PR:Q10318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydroxy-acid dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00977","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxy-acid dehydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.06c","secondary_identifiers":["UniProtKB:Q10318"],"synonyms":[{"name":"2,3-dihydroxy acid hydrolyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ilvD","type":"exact"}],"termid":"PR:Q10318"}


id: PBO:0084486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific prospore membrane protein; required to produce bending force necessary for proper assembly of the prospore membrane during sporulation","termid":"PBO:0084486"}


id: PBO:0060825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN1 divergent transcript","termid":"PBO:0060825"}


id: GO:0018603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nitrobenzene + NADH + O2 = NAD+ + nitrite + catechol.","definition_xrefs":["UM-BBD_reactionID:r0306"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrobenzene 1,2-dioxygenase activity (obsolete GO:0018603)","termid":"GO:0018603"}


id: PBO:0091759
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2108180_2108181insA","termid":"PBO:0091759"}


id: GO:0045268
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The hexamer that possesses the catalytic activity of the plasma membrane hydrogen-transporting ATP synthase. Examples of this component are found in Bacterial species.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase, catalytic core (obsolete GO:0045268)","synonyms":[{"name":"hydrogen-transporting ATP synthase, catalytic core","type":"broad"},{"name":"proton-transporting ATP synthase, catalytic core","type":"broad"}],"termid":"GO:0045268"}


id: MOD:01353
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:15602776","Unimod:141#K","PubMed:12643539","PubMed:6273432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidination of lysines or N-terminal amines with methyl acetimidate","termid":"MOD:00509"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidination of lysines or N-terminal amines with methyl acetimidate - site K","synonyms":[{"name":"Amidine","type":"related"},{"name":"amidination of lysines or N-terminal amines with methyl acetimidate","type":"related"}],"termid":"MOD:01353"}


id: PBO:0065662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRK antisense RNA 1","termid":"PBO:0065662"}


id: PBO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 73","termid":"PBO:0052806"}


id: PR:Q9P7H0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23105:SF12","OMA:SCHPO01976","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.10c","secondary_identifiers":["UniProtKB:Q9P7H0"],"synonyms":[{"name":"H/ACA snoRNP protein NHP2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"P17-nhp2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NHP2","type":"exact"},{"name":"high mobility group-like nuclear protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7H0"}


id: PBO:0033776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_spindle_pole_body_movement","termid":"PBO:0033776"}


id: PBO:0003464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosyltransferase for the addition of the mannose to dolichol-linked Man7GlcNAc2, Alg12 (predicted)","termid":"PBO:0003464"}


id: GO:0003398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the amphid sensory organ.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"amphid sensory organ development","termid":"GO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell differentiation involved in amphid sensory organ development","termid":"GO:0003398"}


id: PBO:0076064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm tail PG-rich repeat containing 2","termid":"PBO:0076064"}


id: PBO:0031763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_replicated_DNA","termid":"PBO:0031763"}


id: PBO:0043733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 12","termid":"PBO:0043733"}


id: MONDO:0850077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic multisutural craniosynostosis","secondary_identifiers":["Orphanet:620152","MEDGEN:1843294","GARD:22474","UMLS:C5680397"],"termid":"MONDO:0850077","xrefs":{"Monarch":{"xref_id":"0850077"}}}


id: GO:0071663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of granzyme B.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"regulation of granzyme B production","termid":"GO:0071661"},{"relation_name":"positively_regulates","term_name":"granzyme B production","termid":"GO:0071613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of granzyme B production","termid":"GO:0071663"}


id: MONDO:0007381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epithelial recurrent erosion dystrophy (ERED) is a rare form of superficial corneal dystrophy characterized by recurrent episodes of epithelial erosions from childhood in the absence of associated diseases, with occasional impairment of vision.","definition_xrefs":["Orphanet:293381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epithelial recurrent erosion dystrophy","secondary_identifiers":["GARD:17338","OMIM:122400","icd11.foundation:1105690299","MEDGEN:342263","MESH:C565155","DOID:0070337","UMLS:C1852551","SCTID:715908008"],"synonyms":[{"name":"ERED","type":"exact"},{"name":"corneal erosions, recurring hereditary","type":"related"},{"name":"dystrophia Helsinglandica","type":"exact"},{"name":"dystrophia Smolandiensis","type":"exact"},{"name":"epithelial recurrent erosion dystrophy","type":"exact"},{"name":"recurrent hereditary corneal erosions","type":"exact"}],"termid":"MONDO:0007381","xrefs":{"Monarch":{"xref_id":"0007381"}}}


id: PBO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGT1 family transcriptional regulator Sgt1","termid":"PBO:0001199"}


id: PBO:0059793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 19","termid":"PBO:0059793"}


id: PBO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored cell surface protein involved in ascospore wall assembly Meu10","termid":"PBO:0005678"}


id: MONDO:0020977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious or non-infectious inflammatory process that affects the prostate gland. Infectious causative agents include bacteria, parasites, fungi, and viruses. It is characterized by the formation of granulomas in the prostatic tissue.","definition_xrefs":["NCIT:C26789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostatitis","termid":"MONDO:0005280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulomatous prostatitis","secondary_identifiers":["UMLS:C0018204","icd11.foundation:66037326","MEDGEN:42294","SCTID:61500009","ICD9:601.8"],"synonyms":[{"name":"Granulomatous Prostatitis","type":"related"},{"name":"Granulomatous prostatitis","type":"related"},{"name":"granulomatous prostatitis","type":"exact"}],"termid":"MONDO:0020977","xrefs":{"Monarch":{"xref_id":"0020977"}}}


id: PBO:0082190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldehyde reductase; involved in detoxification of lignocellulose-derived aldehydes; catalyzes the reduction of furan, aliphatic and aromatic aldehydes using either NADH or NADPH as co-factor; membrane of the quinone oxidoreductase subfamily of the medium-chain dehydrogenase/reductase family; null mutant displays sensitivity to DNA damaging agents; protein abundance increases in response to DNA replication stress","termid":"PBO:0082190"}


id: MOD:00518
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc2dHex2 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)dHex(2)","type":"related"},{"name":"HexNAc2dHex2","type":"related"}],"termid":"MOD:00518"}


id: MONDO:0013339
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87362],"is_not":false,"summary":null,"term":"MONDO:0013339"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the SDHA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1GG","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15684","MEDGEN:462248","DOID:0110435","OMIM:613642","UMLS:C3150898"],"synonyms":[{"name":"CMD1GG","type":"exact"},{"name":"SDHA familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1GG","type":"related"},{"name":"cardiomyopathy, dilated, type 1Gg","type":"exact"},{"name":"dilated cardiomyopathy type 1GG","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in SDHA","type":"exact"}],"termid":"MONDO:0013339","terms_by_termid":{"MONDO:0013339":null},"xrefs":{"Monarch":{"xref_id":"0013339"}}}


id: PBO:0062576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 5 pseudogene","termid":"PBO:0062576"}


id: PR:O74397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine synthetase domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase domain-containing protein C4F6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.11c","secondary_identifiers":["UniProtKB:O74397"],"synonyms":[{"name":"Spom972h-ASNSD1","type":"exact"}],"termid":"PR:O74397"}


id: PBO:0073058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDAD1 antisense RNA 1","termid":"PBO:0073058"}


id: PBO:0066488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A","termid":"PBO:0066488"}


id: GO:0009084
data:
  {"annotated_genes":["SJAG_01019","SJAG_00120","SJAG_04054","SJAG_00359","SJAG_01461","SJAG_00392","SJAG_04145","SJAG_00495","SJAG_04577","SJAG_03457","SJAG_00635","SJAG_03266","SJAG_00695","SJAG_00412","SJAG_00636","SJAG_01592","SJAG_00660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[98482,112238,110794,111409,70561,102943,78802,106844,118718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[111563,59831,118064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[78238,91208,67521,64669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00359":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00495":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_03266":null,"SJAG_03457":null,"SJAG_04054":null,"SJAG_04145":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"glutamine family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"glutamine family amino acid anabolism","type":"exact"},{"name":"glutamine family amino acid biosynthesis","type":"exact"},{"name":"glutamine family amino acid formation","type":"exact"},{"name":"glutamine family amino acid synthesis","type":"exact"}],"termid":"GO:0009084","terms_by_termid":{"GO:0006542":null,"GO:0042450":null,"GO:0055129":null,"GO:0097054":null}}


id: GO:0060042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the retina is generated and organized.","definition_xrefs":["GOC:dph","GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina morphogenesis in camera-type eye","synonyms":[{"name":"retina morphogenesis in camera-style eye","type":"exact"},{"name":"retinogenesis","type":"exact"}],"termid":"GO:0060042"}


id: PBO:0087713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; target of the global repressor Tup1p","termid":"PBO:0087713"}


id: GO:0071399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to linoleic acid","termid":"GO:0070543"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to linoleic acid","synonyms":[{"name":"cellular response to linoleate","type":"exact"}],"termid":"GO:0071399"}


id: PBO:0061872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte expressed protein","termid":"PBO:0061872"}


id: PBO:0114062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Roadblock/LC7 domain superfamily protein Mug15","termid":"PBO:0114062"}


id: PBO:0030750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_response_to_pheromone_at_normal_pheromone_level_(obsolete_FYPO:0000987)","termid":"PBO:0030750"}


id: MONDO:0021783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the throat due to Streptococcus pyogenes.","definition_xrefs":["NCIT:C116003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharyngitis","termid":"MONDO:0002258"},{"relation_name":"is_a","term_name":"streptococcal infection","termid":"MONDO:0021680"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcal sore throat","secondary_identifiers":["MEDGEN:508129","UMLS:C0036689","SCTID:43878008","ICD9:034.0"],"synonyms":[{"name":"Septic sore throat","type":"related"},{"name":"Strep throat","type":"related"},{"name":"Strept throat","type":"related"},{"name":"Streptococcal Pharyngitis","type":"related"},{"name":"Streptococcal angina","type":"related"},{"name":"Streptococcal pharyngitis","type":"related"},{"name":"Streptococcal sore throat","type":"related"},{"name":"strep throat","type":"exact"},{"name":"streptococcal pharyngitis","type":"exact"}],"termid":"MONDO:0021783","xrefs":{"Monarch":{"xref_id":"0021783"}}}


id: MONDO:0011166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphedema-atrial septal defects-facial changes syndrome is characterized by congenital lymphoedema of the lower limbs, atrial septal defect and a characteristic facies (a round face with a prominent forehead, a flat nasal bridge with a broad nasal tip, epicanthal folds, a thin upper lip and a cleft chin). It has been described in two brothers and a sister. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:86915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphedema-atrial septal defects-facial changes syndrome","secondary_identifiers":["MESH:C567398","MEDGEN:383042","UMLS:C2677167","GARD:284","OMIM:601927","SCTID:721978002","MESH:C535539"],"synonyms":[{"name":"Irons Bhan syndrome","type":"related"},{"name":"Irons-Bhan syndrome","type":"exact"},{"name":"Irons-Bianchi syndrome","type":"exact"},{"name":"autosomal recessive syndrome of lymphedema, hydroceles, atrial septal defect, and characteristic facial changes","type":"related"},{"name":"lymphedema, CARDIAC septal defects, and characteristic facies","type":"related"},{"name":"lymphedema, atrial septal defect, and characteristic facial changes","type":"related"},{"name":"lymphedema, atrial septal defect, and characteristic facies","type":"related"}],"termid":"MONDO:0011166","xrefs":{"Monarch":{"xref_id":"0011166"}}}


id: PBO:0044926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase delta","termid":"PBO:0044926"}


id: GO:0120157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein kinase complex that is required for the establishment of a cell polarity axis during the cell division cycle. Binds directly to activated CDC42 GTPase and is required for orchestrating a cellular gradient of CDC42. In S. cerevisiae components are: BEM1, CDC24 and CLA4; from worms to vertebrates it contains a PAR6 protein, PAR3 protein and an atypical PKC.","definition_xrefs":["PMID:22500799","PMID:28682236","PMID:11113154","GOC:lnp","PMID:18005931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PAR polarity complex","synonyms":[{"name":"BEM1-CDC24-CLA4 complex","type":"narrow"},{"name":"Cdc42p GEF-PAK complex","type":"narrow"},{"name":"PAR3-PAR6-atypical PKC","type":"narrow"},{"name":"PAR3/PAR6/aPKC","type":"narrow"},{"name":"PAR6-PAR3-aPKC complex","type":"narrow"},{"name":"apical polarity complex","type":"exact"}],"termid":"GO:0120157"}


id: PBO:0074080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 4","termid":"PBO:0074080"}


id: GO:0030345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of tooth enamel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent conferring compression resistance","termid":"GO:0030021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of tooth enamel","termid":"GO:0030345"}


id: PBO:0110380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 6","termid":"PBO:0110380"}


id: GO:0009333
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cysteine synthase is a multienzyme complex made up, in E. coli, of the heteromeric hexamer serine acetyltransferase and the homodimer O-acetylserine (thiol)-lyase A.","definition_xrefs":["PMID:10993149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cysteine synthase complex","secondary_identifiers":["MetaCyc:CYSSYNMULTI-CPLX"],"termid":"GO:0009333"}


id: PBO:0061923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily F member 12, pseudogene","termid":"PBO:0061923"}


id: PBO:0004057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface agglutination protein Map4","termid":"PBO:0004057"}


id: MONDO:0021037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of neurodegenerative disease with dementia that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic neurodegenerative disease with dementia (obsolete MONDO:0021037)","secondary_identifiers":["Orphanet:276058"],"synonyms":[{"name":"genetic neurodegenerative disease with dementia","type":"exact"}],"termid":"MONDO:0021037","xrefs":{"Monarch":{"xref_id":"0021037"}}}


id: PBO:0042314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD28 molecule","termid":"PBO:0042314"}


id: PBO:0051931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 3","termid":"PBO:0051931"}


id: PBO:0070460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 3","termid":"PBO:0070460"}


id: FYPO:0006081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is increased.","definition_xrefs":["PMID:20705466","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"},{"relation_name":"is_a","term_name":"increased protein localization to cell cortex during vegetative growth","termid":"FYPO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to actin cortical patch","synonyms":[{"name":"increased protein localisation to actin cortical patch during vegetative growth","type":"exact"},{"name":"increased protein localization to F-actin patch","type":"exact"},{"name":"increased protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"increased protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"increased protein localization to actin patch","type":"exact"}],"termid":"FYPO:0006081"}


id: PBO:0064312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 1","termid":"PBO:0064312"}


id: MONDO:0010882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aphalangy-syndactyly-microcephaly is an extremely rare malformation syndrome characterized by the association of partial distal aphalangia with syndactyly, duplication of metatarsal IV, microcephaly, and mild intellectual disability.","definition_xrefs":["Orphanet:1113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"aphalangy-syndactyly-microcephaly syndrome","secondary_identifiers":["OMIM:600384","GARD:748","MEDGEN:324958","UMLS:C1838161","MESH:C563942"],"synonyms":[{"name":"APHALANGIA, partial, with syndactyly and DUPLICATION of metatarsal IV","type":"related"},{"name":"Aphalangia partial with syndactyly and duplication of metatarsal IV","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal 4","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal type 4","type":"exact"}],"termid":"MONDO:0010882","xrefs":{"Monarch":{"xref_id":"0010882"}}}


id: PBO:0068781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 18, pseudogene","termid":"PBO:0068781"}


id: GO:0051172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nitrogen or nitrogenous compounds.","definition_xrefs":["GOC:tb","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nitrogen compound metabolic process (obsolete GO:0051172)","termid":"GO:0051172"}


id: RO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visits_flowers_of","termid":"RO:0002622"}


id: PBO:0065341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prune exopolyphosphatase pseudogene 1","termid":"PBO:0065341"}


id: PBO:0017053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U3B","termid":"PBO:0017053"}


id: PBO:0062256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 3 pseudogene","termid":"PBO:0062256"}


id: GO:2000965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellooligosaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of cellooligosaccharide metabolic process","termid":"GO:2000962"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide catabolic process","termid":"GO:2000963"},{"relation_name":"positively_regulates","term_name":"cellooligosaccharide catabolic process","termid":"GO:2000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellooligosaccharide catabolic process","synonyms":[{"name":"positive regulation of cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000965"}


id: MONDO:0009609
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86184],"is_not":false,"summary":null,"term":"MONDO:0009609"}]},"cv_name":"mondo","definition":"Methylcobalamin deficiency cbl G type is a rare condition that occurs when the body is unable to process certain amino acids (building blocks of protein) properly. In most cases, signs and symptoms develop during the first year of life; however, the age of onset can range from infancy to adulthood. Common features of the condition include feeding difficulties, lethargy, seizures, poor muscle tone (hypotonia), developmental delay, microcephaly (unusually small head size), and megaloblastic anemia. Methylcobalamin deficiency cbl G type is caused by changes (mutations) in the MTR gene and is inherited in an autosomal recessive manner. Treatment generally includes regular doses of hydroxycobalamin (vitamin B12). Some affected people may also require supplementation with folates and betaine.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"excluded_subClassOf","term_name":"thrombotic microangiopathy","termid":"MONDO:0019737"},{"relation_name":"is_a","term_name":"homocystinuria without methylmalonic aciduria","termid":"MONDO:0018964"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005066","MONDO:0005570","MONDO:0006025","MONDO:0004736"],"is_obsolete":false,"name":"methylcobalamin deficiency type cblG","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2201111","MEDGEN:344426","Orphanet:2170","UMLS:C1855128","SCTID:721187005","GARD:3577","DOID:0050733","DOID:0112256","OMIM:250940"],"synonyms":[{"name":"HMAG","type":"related"},{"name":"cblG","type":"related"},{"name":"functional methionine synthase deficiency type cblG","type":"exact"},{"name":"homocystinuria due to defect in methylation Cbl g","type":"related"},{"name":"homocystinuria-megaloblastic Anaemia due to defect in cobalamin metabolism, cblG complementation type","type":"related"},{"name":"homocystinuria-megaloblastic Anemia due to defect in cobalamin metabolism, cblG complementation type","type":"related"},{"name":"homocystinuria-megaloblastic anemia, cblG complementation type","type":"related"},{"name":"methionine synthase deficiency","type":"related"},{"name":"methylcobalamin deficiency Cbl G type","type":"related"},{"name":"methylcobalamin deficiency type cblG","type":"exact"},{"name":"methylcobalamin deficiency, cblG type","type":"related"},{"name":"methylmalonic aciduria and homocystinuria type cblG","type":"related"}],"termid":"MONDO:0009609","terms_by_termid":{"MONDO:0009609":null},"xrefs":{"Monarch":{"xref_id":"0009609"}}}


id: SO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is involved in the regulation of transcription of a group of regulated genes.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000752 gene_group_regulatory_region (obsolete SO:0000752)","synonyms":[{"name":"gene group regulatory region","type":"exact"}],"termid":"SO:0000752"}


id: GO:1903948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of atrial cardiac muscle cell action potential.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:25281747","GOC:nc","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"regulation of atrial cardiac muscle cell action potential","termid":"GO:0098910"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle cell contraction","termid":"GO:0106135"},{"relation_name":"negatively_regulates","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of atrial cardiac muscle cell action potential","synonyms":[{"name":"down regulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of atrial cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:1903948"}


id: PBO:0072113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 2","termid":"PBO:0072113"}


id: PBO:0000117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0321 family protein 3","termid":"PBO:0000117"}


id: MONDO:0015229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ciliopathy with multisystem involvement. It is invariantly characterized by rod-cone dystrophy, and at least three additional non-ocular features such as intellectual disability, obesity, polydactyly, hypogonadism, or renal anomalies as primary manifestations. In the absence of one of these four primary clinical features, the diagnosis of BBS is made when at least two secondary features are observed, including hepatic fibrosis, diabetes mellitus, reproductive and developmental abnormalities, growth retardation, speech delays, or cardiovascular problems","definition_xrefs":["PMID:10874630","Orphanet:110"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"excluded_subClassOf","term_name":"female infertility","termid":"MONDO:0021124"},{"relation_name":"excluded_subClassOf","term_name":"intestinal motility disease","termid":"MONDO:0021189"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome (obsolete MONDO:0043007)","termid":"MONDO:0043007"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome","secondary_identifiers":["icd11.foundation:255526264","NORD:838","MEDGEN:156019","OMIMPS:209900","UMLS:C0752166","GARD:6866","MedDRA:10056715","ICD9:759.89","SCTID:5619004","NCIT:C118632","DOID:1935","MESH:D020788","NANDO:2200414"],"synonyms":[{"name":"BBS","type":"exact"},{"name":"Bardet-Biedl syndrome","type":"exact"}],"termid":"MONDO:0015229","xrefs":{"Monarch":{"xref_id":"0015229"}}}


id: PBO:0004808
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.86","termid":"PBO:0004808"}


id: PR:Q9USU2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dimethyladenosine transferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethyladenosine transferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.02","secondary_identifiers":["UniProtKB:Q9USU2"],"synonyms":[{"name":"18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"18S rRNA dimethylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DIMT1","type":"exact"}],"termid":"PR:Q9USU2"}


id: GO:0034951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: o-hydroxylaminobenzoate = 3-hydroxyanthranilate.","definition_xrefs":["UM-BBD_reactionID:r1026"],"gene_count":0,"genotype_count":0,"name":"obsolete o-hydroxylaminobenzoate mutase activity (obsolete GO:0034951)","termid":"GO:0034951"}


id: PBO:0053360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 265-3, pseudogene","termid":"PBO:0053360"}


id: GO:1900473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylcholine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8056324","GOC:TermGenie","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900473)","synonyms":[{"name":"negative regulation of phosphatidylcholine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900473"}


id: PBO:0070268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 2A","termid":"PBO:0070268"}


id: GO:0061117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart.","definition_xrefs":["GOC:hjd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organ growth","termid":"GO:0046621"},{"relation_name":"is_a","term_name":"regulation of heart growth","termid":"GO:0060420"},{"relation_name":"negatively_regulates","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart growth","termid":"GO:0061117"}


id: FYPO:0007063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any 23S rRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PMID:29641590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rRNA precursor level","termid":"FYPO:0003600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased 23S rRNA precursor level","synonyms":[{"name":"increased 23S rRNA precursor accumulation","type":"related"},{"name":"increased 23S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased 23S rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased 23S rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0007063"}


id: MONDO:0016375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired peripheral movement disorder (obsolete MONDO:0016375)","secondary_identifiers":["Orphanet:221114"],"termid":"MONDO:0016375","xrefs":{"Monarch":{"xref_id":"0016375"}}}


id: PBO:0068498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 83, pseudogene","termid":"PBO:0068498"}


id: MONDO:0015623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cavitary myiasis is a rare parasitic disease characterized by the infestation of natural body cavities (e.g. aural, nasal, oral, urogenital myiasis) and internal organs (e.g. cerebral myiasis, ophthalmomyiasis, intestinal and tracheopulmonary myiasis) with dipteran larvae. Clinical presentation is variable depending on the affected site(s) and degree of infestation and include foreign-body sensation (with or without movement sensation), hemorrhage, pain, edema, sensory loss, malodor, and pruritus, among others. Neurological features (e.g. motor deficits, seizures, reduced mental status, extrapyramidal signs) have been reported in cerebral myiasis.","definition_xrefs":["Orphanet:165958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myiasis","termid":"MONDO:0019147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cavitary myiasis","secondary_identifiers":["MEDGEN:1631496","GARD:20066","UMLS:C4707154","SCTID:764811001"],"termid":"MONDO:0015623","xrefs":{"Monarch":{"xref_id":"0015623"}}}


id: FYPO:0007884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which Lms2-8 complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:33378677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished Lsm2-8 complex binding","synonyms":[{"name":"Lsm2-8 complex binding abolished","type":"exact"}],"termid":"FYPO:0007884"}


id: GO:0019363
data:
  {"annotated_genes":["SJAG_04467","SJAG_01500","SJAG_02618","SJAG_01566","SJAG_01582","SJAG_04693","SJAG_03298","SJAG_03946","SJAG_02889","SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75080,77783,113418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[80259,99664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[71433,78273,80181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[89342,90976,109940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:jl","GOC:vw","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"pyridine nucleotide metabolic process","termid":"GO:0019362"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04467":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyridine nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleotide anabolism","type":"exact"},{"name":"pyridine nucleotide biosynthesis","type":"exact"},{"name":"pyridine nucleotide formation","type":"exact"},{"name":"pyridine nucleotide synthesis","type":"exact"}],"termid":"GO:0019363","terms_by_termid":{"GO:0006741":null,"GO:0009435":null,"GO:0019358":null,"GO:0034355":null}}


id: PBO:0082600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin-coated vesicle component, regulator of endocytosis; copurifies with the DSC ubiquitin ligase complex; UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p; required for efficient clathrin-mediated endocytosis; ortholog of fission yeast Ucp10","termid":"PBO:0082600"}


id: MONDO:0005642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conjunctivitis due to hypersensitivity to various allergens.","definition_xrefs":["MESH:D003233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic conjunctivitis","termid":"MONDO:0002314"},{"relation_name":"is_a","term_name":"eye allergy","termid":"MONDO:0005551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"atopic conjunctivitis","secondary_identifiers":["EFO:0007141","HP:0007879","ICD9:372.14","UMLS:C0009766","DOID:11204","NCIT:C34506","MEDGEN:3590","SCTID:473460002"],"synonyms":[{"name":"Atopic conjunctivitis","type":"exact"},{"name":"allergic conjunctivitis","type":"exact"},{"name":"allergic conjunctivitis (disease)","type":"exact"},{"name":"allergic form of conjunctivitis (disease)","type":"exact"}],"termid":"MONDO:0005642","xrefs":{"Monarch":{"xref_id":"0005642"}}}


id: PBO:0001378
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome","termid":"PBO:0001378"}


id: PBO:0050792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3E","termid":"PBO:0050792"}


id: MONDO:0015977
data:
  {"annotated_genes":["SJAG_02208","SJAG_00222","SJAG_02330"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030519"},{"annotations":[86424,86423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958013"}]},"cv_name":"mondo","definition":"A decreased level of serum immunoglobulins. It may be inherited or acquired. It is caused by decreased or inefficient production of immunoglobulins from B cells or by a decrease in the numbers of B cells themselves. Low levels of immunoglobulins will affect the immune system's ability to combat bacterial infection. Supplementation of immunoglobulins is needed to prevent worsening outcomes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deficiency","termid":"MONDO:0002211"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_02208":null,"SJAG_02330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:601495","UMLS:C0001768","ICD9:279.00","Orphanet:183669","DOID:2583","MESH:D000361","MedDRA:10001471","GARD:20320","MEDGEN:168"],"synonyms":[{"name":"Gammaglobulin Deficiency","type":"related"},{"name":"IGHM","type":"exact"},{"name":"Immunoglobulin Deficiency","type":"related"},{"name":"agammaglobulinemia","type":"exact"},{"name":"antibody Deficiency","type":"related"},{"name":"hypogammaglobulinemia","type":"exact"},{"name":"mu heavy chain deficiency","type":"exact"}],"termid":"MONDO:0015977","terms_by_termid":{"MONDO:0030519":null,"MONDO:0958013":null},"xrefs":{"Monarch":{"xref_id":"0015977"}}}


id: GO:0070246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a natural killer cell, a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation.","definition_xrefs":["CL:0000623","GOC:mtg_apoptosis","PMID:15728472","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell apoptotic process","synonyms":[{"name":"NK cell apoptosis","type":"exact"},{"name":"natural killer cell apoptosis","type":"narrow"}],"termid":"GO:0070246"}


id: GO:0051007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: squalene = hop-22(29)-ene.","definition_xrefs":["EC:5.4.99.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"},{"relation_name":"is_a","term_name":"squalene cyclase activity","termid":"GO:0034072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003674","GO:0009975","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"squalene-hopene cyclase activity","secondary_identifiers":["RHEA:17637","MetaCyc:5.4.99.17-RXN"],"synonyms":[{"name":"squalene mutase (cyclizing)","type":"related"},{"name":"squalene:hopene cyclase activity","type":"exact"}],"termid":"GO:0051007"}


id: PBO:0065708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylate synthase 7 pseudogene 1","termid":"PBO:0065708"}


id: MONDO:0700061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characteristic in which the cause of the disease is present in some of the cells of the organism, or in all the cells of the organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic vs complete","termid":"MONDO:0700061","xrefs":{"Monarch":{"xref_id":"0700061"}}}


id: GO:1903958
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of nitric-oxide synthase activity.","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","GOC:bhm","PMID:25417112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nitric-oxide synthase complex","synonyms":[{"name":"iNOS-S100A8/A9 complex","type":"narrow"}],"termid":"GO:1903958"}


id: MONDO:1010149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tricho-dento-osseous-like syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricho-dento-osseous-like syndrome, non-human animal","secondary_identifiers":["OMIA:002109"],"termid":"MONDO:1010149","xrefs":{"Monarch":{"xref_id":"1010149"}}}


id: PBO:0088907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane borate efflux transmembrane transporter Bor1","termid":"PBO:0088907"}


id: PBO:0050076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemicentin 1","termid":"PBO:0050076"}


id: GO:0007117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bud portion of a cell that reproduces by budding irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"},{"relation_name":"part_of","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell bud growth","synonyms":[{"name":"bud growth","type":"broad"}],"termid":"GO:0007117"}


id: PR:O74389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug176 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 176 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.14","synonyms":[{"name":"Spom972h-mug176","type":"exact"}],"termid":"PR:O74389"}


id: PBO:0066564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 3","termid":"PBO:0066564"}


id: PATO:0001103
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001103 relative stiffness value (obsolete PATO:0001103)","termid":"PATO:0001103"}


id: GO:0034749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the Scribble protein (a cell polarity determinant) and the tumor suppressor protein adenomatous polyposis coli (APC); may be involved in the control of cell proliferation.","definition_xrefs":["PMID:16611247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Scrib-APC complex","synonyms":[{"name":"hScrib-APC complex","type":"narrow"}],"termid":"GO:0034749"}


id: PBO:0048890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 10","termid":"PBO:0048890"}


id: PBO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease Dhp1","termid":"PBO:0002013"}


id: PBO:0088406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7","termid":"PBO:0088406"}


id: PR:Q9HDY9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional repressor EMSY that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M cell-type agglutination protein mam3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP11E10.02c","secondary_identifiers":["UniProtKB:Q9HDY9"],"synonyms":[{"name":"Spom972h-EMSY","type":"exact"}],"termid":"PR:Q9HDY9"}


id: PBO:0063537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation and apoptosis adaptor protein 15","termid":"PBO:0063537"}


id: FYPO:0002625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to parts of the chromosome containing ribosomal DNA is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to rDNA","synonyms":[{"name":"normal protein localisation to rDNA","type":"exact"},{"name":"normal protein localization to rDNA during mitotic cell cycle","type":"related"},{"name":"normal protein localization to rDNA during vegetative growth","type":"exact"},{"name":"normal protein localization to ribosomal DNA","type":"exact"}],"termid":"FYPO:0002625"}


id: PBO:0003892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cycloisomerase 2 family","termid":"PBO:0003892"}


id: GO:0018488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic aldehyde + O2 + H2O = an aromatic acid + hydrogen peroxide.","definition_xrefs":["EC:1.2.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde oxidase activity","termid":"GO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"aryl-aldehyde oxidase activity","secondary_identifiers":["UM-BBD_reactionID:r0145","MetaCyc:ARYL-ALDEHYDE-OXIDASE-RXN","RHEA:18569"],"synonyms":[{"name":"aryl-aldehyde:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0018488"}


id: PBO:0080254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 17 pseudogene","termid":"PBO:0080254"}


id: GO:0044524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by the addition of sulfur.","definition_xrefs":["PMID:19903941","GOC:jl","GOC:jsg","PMID:22169477","PMID:8161529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein sulfhydration","termid":"GO:0044524"}


id: PBO:0047821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O1B (pseudogene)","termid":"PBO:0047821"}


id: MONDO:0018515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare rectal carcinoma characterized by the presence of a malignant squamous cell infiltrate.","definition_xrefs":["NCIT:C5554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal squamous cell carcinoma","termid":"MONDO:0006165"},{"relation_name":"is_a","term_name":"rectal carcinoma","termid":"MONDO:0044937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"squamous cell carcinoma of rectum","secondary_identifiers":["UMLS:C1335690","DOID:5528","Orphanet:424002","MEDGEN:235534","SCTID:766979005","GARD:21770"],"synonyms":[{"name":"rectal squamous carcinoma","type":"exact"},{"name":"rectal squamous cell cancer","type":"exact"},{"name":"rectal squamous cell carcinoma","type":"exact"},{"name":"rectum squamous cell carcinoma","type":"exact"},{"name":"squamous carcinoma of rectum","type":"exact"},{"name":"squamous carcinoma of the rectum","type":"exact"},{"name":"squamous cell carcinoma of rectum","type":"exact"},{"name":"squamous cell carcinoma of the rectum","type":"exact"}],"termid":"MONDO:0018515","xrefs":{"Monarch":{"xref_id":"0018515"}}}


id: PBO:0078152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 30","termid":"PBO:0078152"}


id: PBO:0071902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 40","termid":"PBO:0071902"}


id: MONDO:1011591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, domestic cat","secondary_identifiers":["OMIA:000817-9685"],"termid":"MONDO:1011591","xrefs":{"Monarch":{"xref_id":"1011591"}}}


id: PBO:0083345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene DAD4/YDR320C-A","termid":"PBO:0083345"}


id: PATO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000906 f1 sterile (obsolete PATO:0000906)","synonyms":[{"name":"F1 infertile","type":"related"}],"termid":"PATO:0000906"}


id: GO:0102454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin + UDP-D-galactose = cyanidin 3-O-beta-D-galactoside betaine + UDP.","definition_xrefs":["RHEA:35631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"cyanidin 3-O-galactosyltransferase activity","secondary_identifiers":["EC:2.4.1.294","MetaCyc:RXN-13960"],"termid":"GO:0102454"}


id: MOD:01768
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a palmitoleyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"palmitoleylated residue","termid":"MOD:01423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-palmitoleylated residue","termid":"MOD:01768"}


id: PBO:0002302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin fold protein Plp1 (predicted)","termid":"PBO:0002302"}


id: PBO:0001851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase (predicted)","termid":"PBO:0001851"}


id: MONDO:1012920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hernia of the linea alba that occurs in cattle due to a mutation in the TWIST1 gene.","definition_xrefs":["PMID:35187669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abdominal hernia, TWIST1-related, cattle","secondary_identifiers":["OMIA:002532-9913"],"termid":"MONDO:1012920","xrefs":{"Monarch":{"xref_id":"1012920"}}}


id: GO:0033133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hexokinase activity","termid":"GO:1903301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucokinase activity","synonyms":[{"name":"glucokinase activator","type":"narrow"},{"name":"stimulation of glucokinase activity","type":"narrow"},{"name":"up regulation of glucokinase activity","type":"exact"},{"name":"up-regulation of glucokinase activity","type":"exact"},{"name":"upregulation of glucokinase activity","type":"exact"}],"termid":"GO:0033133"}


id: PBO:0058299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4673","termid":"PBO:0058299"}


id: GO:0006654
data:
  {"annotated_genes":["SJAG_04319","SJAG_04323","SJAG_01957","SJAG_04883","SJAG_01519","SJAG_01036","SJAG_02654"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62417,71405,71862,71998,78101,93384,105212],"is_not":false,"summary":null,"term":"GO:0006654"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidic acid metabolic process","termid":"GO:0046473"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_01519":null,"SJAG_01957":null,"SJAG_02654":null,"SJAG_04319":null,"SJAG_04323":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483166"],"synonyms":[{"name":"phosphatidic acid anabolism","type":"exact"},{"name":"phosphatidic acid biosynthesis","type":"exact"},{"name":"phosphatidic acid formation","type":"exact"},{"name":"phosphatidic acid synthesis","type":"exact"}],"termid":"GO:0006654","terms_by_termid":{"GO:0006654":null}}


id: PR:P40381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin-associated protein swi6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.01c","synonyms":[{"name":"Spom972h-swi6","type":"exact"}],"termid":"PR:P40381"}


id: GO:0008397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a steroid + reduced [NADPH--hemoprotein reductase] + O2 = a 12-alpha-hydroxysteroid + oxidized [NADPH--hemoprotein reductase]- H2O +H+.","definition_xrefs":["EC:1.14.14.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sterol 12-alpha-hydroxylase activity","secondary_identifiers":["RHEA:46752"],"synonyms":[{"name":"cytochrome P450 CYP8B1","type":"narrow"}],"termid":"GO:0008397"}


id: GO:0006372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete lariat formation, 5'-splice site cleavage (obsolete GO:0006372)","synonyms":[{"name":"lariat formation, 5'-splice site cleavage","type":"exact"}],"termid":"GO:0006372"}


id: GO:0052432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of programmed cell death in the symbiont, where programmed cell death proceeds by apoptosis. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont apoptosis (obsolete GO:0052432)","synonyms":[{"name":"modulation by organism of symbiont apoptosis","type":"exact"},{"name":"modulation by organism of symbiont apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052432"}


id: GO:0018662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenol + NADPH + H+ + O2 = catechol + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenol 2-monooxygenase activity","secondary_identifiers":["MetaCyc:PHENOL-2-MONOOXYGENASE-RXN","UM-BBD_enzymeID:r0696","RHEA:17061"],"synonyms":[{"name":"phenol hydroxylase activity","type":"related"},{"name":"phenol o-hydroxylase activity","type":"related"},{"name":"phenol,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0018662"}


id: PBO:0047155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 184 member A","termid":"PBO:0047155"}


id: PBO:0085267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal 2,4-dienoyl-CoA reductase; auxiliary enzyme of fatty acid beta-oxidation; homodimeric enzyme required for growth and sporulation on petroselineate medium; expression induced during late sporulation and in the presence of oleate","termid":"PBO:0085267"}


id: GO:0015031
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id: MONDO:1011602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in Chinese hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, Chinese hamster","secondary_identifiers":["OMIA:000284-10029"],"termid":"MONDO:1011602","xrefs":{"Monarch":{"xref_id":"1011602"}}}


id: GO:1902355
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endothelial tube lumen extension that is involved in blood vessel lumen ensheathment.","definition_xrefs":["GOC:TermGenie","GOC:dgh","PMID:23698350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial tube lumen extension","termid":"GO:0097498"},{"relation_name":"part_of","term_name":"blood vessel lumen ensheathment","termid":"GO:0097496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial tube lumen extension involved in blood vessel lumen ensheathment","termid":"GO:1902355"}


id: GO:0045862
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  {"annotated_genes":["SJAG_01489","SJAG_03048","SJAG_03699","SJAG_00712","SJAG_01131","SJAG_00766","SJAG_02723","SJAG_04477","SJAG_00642","SJAG_00071","SJAG_00077","SJAG_01544","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90283],"is_not":false,"summary":null,"term":"GO:0045862"},{"annotations":[89268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[65875,67648,68528,61567,69064,67260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[117402,109219,102702,106983,112043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00077":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of proteolysis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of proteolysis","type":"narrow"},{"name":"positive regulation of peptidolysis","type":"exact"},{"name":"stimulation of proteolysis","type":"narrow"},{"name":"up regulation of proteolysis","type":"exact"},{"name":"up-regulation of proteolysis","type":"exact"},{"name":"upregulation of proteolysis","type":"exact"}],"termid":"GO:0045862","terms_by_termid":{"GO:0032436":null,"GO:0045862":null,"GO:1901800":null,"GO:1905786":null}}


id: FYPO:0003840
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to carbendazim (mecarzole; MBC). Cells stop growing (and may die) at a concentration of carbendazim that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to carbendazim","synonyms":[{"name":"hypersensitive to carbendazim","type":"exact"},{"name":"sensitive to MBC","type":"exact"},{"name":"sensitive to carbendazim during mitotic cell cycle","type":"related"},{"name":"sensitive to carbendazim during vegetative growth","type":"exact"},{"name":"sensitive to mecarzole","type":"exact"},{"name":"sensitive to methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"sensitive to methylbenzylcarbamylate","type":"exact"}],"termid":"FYPO:0003840"}


id: GO:0045657
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of monocyte differentiation","termid":"GO:0045655"},{"relation_name":"positively_regulates","term_name":"monocyte differentiation","termid":"GO:0030224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte differentiation","synonyms":[{"name":"activation of monocyte differentiation","type":"narrow"},{"name":"stimulation of monocyte differentiation","type":"narrow"},{"name":"up regulation of monocyte differentiation","type":"exact"},{"name":"up-regulation of monocyte differentiation","type":"exact"},{"name":"upregulation of monocyte differentiation","type":"exact"}],"termid":"GO:0045657"}


id: MONDO:0100169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"polyneuropathy, inflammatory demyelinating, chronic","synonyms":[{"name":"CIDP","type":"exact"}],"termid":"MONDO:0100169","xrefs":{"Monarch":{"xref_id":"0100169"}}}


id: PBO:0012270
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 7 (predicted)","termid":"PBO:0012270"}


id: MONDO:0001217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conjunctivitis that is characterized by formation of a pseudomembrane.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute conjunctivitis","termid":"MONDO:0001214"},{"relation_name":"is_a","term_name":"bacterial conjunctivitis","termid":"MONDO:0006668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pseudomembranous conjunctivitis","secondary_identifiers":["MEDGEN:102325","icd11.foundation:1606516539","UMLS:C0155144","NCIT:C35196","SCTID:72115001","ICD9:372.04","MONDO:0022856","DOID:11190"],"synonyms":[{"name":"conjunctivitis with pseudomembrane","type":"exact"}],"termid":"MONDO:0001217","xrefs":{"Monarch":{"xref_id":"0001217"}}}


id: PBO:0068446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 20, pseudogene","termid":"PBO:0068446"}


id: PBO:0056097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 2","termid":"PBO:0056097"}


id: PBO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 12","termid":"PBO:0045654"}


id: PBO:0005033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin synthase","termid":"PBO:0005033"}


id: PBO:0061608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1","termid":"PBO:0061608"}


id: FYPO:0005257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-proline measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular proline level","synonyms":[{"name":"decreased cellular L-proline level","type":"exact"},{"name":"decreased cellular proline level during mitotic cell cycle","type":"related"},{"name":"decreased cellular proline level during vegetative growth","type":"exact"},{"name":"decreased level of proline in cell","type":"exact"},{"name":"reduced cellular proline level","type":"exact"},{"name":"reduced level of proline in cell","type":"exact"}],"termid":"FYPO:0005257"}


id: FYPO:0004836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein oxidation during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein oxidation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased protein oxidation during mitotic cell cycle","type":"related"},{"name":"reduced protein oxidation during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004836"}


id: GO:0007470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the prothoracic disc are generated and organized. This includes the transformation of a prothoracic imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into the recognizable adult humerous and anterior spiracle.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"prothoracic disc development","termid":"GO:0035219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prothoracic disc morphogenesis","synonyms":[{"name":"prothoracic disc metamorphosis","type":"exact"}],"termid":"GO:0007470"}


id: GO:0018250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of peptidyl-dehydroalanine from either peptidyl-tyrosine by phenyl transfer, or from peptidyl-serine, which is coupled with the formation of 5-imidazolinone by the two neighboring residues, produces an 4-methylidene-imidazole-5-one active site of some amino acid ammonia-lyases; the 4-methylidene-imidazole-5-one, is formed autocatalytically by cyclization and dehydration of the sequence ASG.","definition_xrefs":["RESID:AA0181"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-dehydroalanine biosynthetic process from peptidyl-tyrosine or peptidyl-serine (obsolete GO:0018250)","synonyms":[{"name":"peptidyl-dehydroalanine anabolism from peptidyl-tyrosine or peptidyl-serine","type":"exact"},{"name":"peptidyl-dehydroalanine formation from peptidyl-tyrosine or peptidyl-serine","type":"exact"},{"name":"peptidyl-dehydroalanine synthesis from peptidyl-tyrosine or peptidyl-serine","type":"exact"}],"termid":"GO:0018250"}


id: MONDO:0014103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the IL17RD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 18 with or without anosmia","secondary_identifiers":["DOID:0090076","GARD:15929","ICD10CM:E23.0","UMLS:C3808975","MEDGEN:815305","OMIM:615267"],"synonyms":[{"name":"HH18","type":"related"},{"name":"IL17RD hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 18 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism 18 with or without anosmia, Autosomal recessive, Autosomal dominant, Digenic dominant","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in IL17RD","type":"exact"}],"termid":"MONDO:0014103","xrefs":{"Monarch":{"xref_id":"0014103"}}}


id: MONDO:0002604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant mesenchymal neoplasm arising from the perivascular cells of the connective and soft tissues. It is characterized by the presence of pericytes that grow in a circumferential pattern around vessels.","definition_xrefs":["NCIT:C6528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericytic neoplasm","secondary_identifiers":["MEDGEN:235473","UMLS:C1335392","DOID:3316"],"synonyms":[{"name":"Pericytic neoplasm","type":"exact"},{"name":"Pericytic tumor","type":"exact"},{"name":"Pericytic tumour","type":"exact"},{"name":"malignant perivascular cancer","type":"narrow"},{"name":"perivascular neoplasm","type":"exact"},{"name":"perivascular tumor","type":"exact"},{"name":"perivascular tumour","type":"exact"}],"termid":"MONDO:0002604","xrefs":{"Monarch":{"xref_id":"0002604"}}}


id: PBO:0018057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine) methyltransferase Trm140 (predicted)","termid":"PBO:0018057"}


id: FYECO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"3'5'-cyclic AMP was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000063 absence of 3'5'-cyclic AMP (obsolete FYECO:0000063)","termid":"FYECO:0000063"}


id: GO:0018067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of protein tyrosine to peptidyl-L-3',4'-dihydroxyphenylalanine (DOPA).","definition_xrefs":["RESID:AA0146"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-3',4'-dihydroxyphenylalanine biosynthetic process from peptidyl-tyrosine (obsolete GO:0018067)","synonyms":[{"name":"peptidyl-L-3',4'-dihydroxyphenylalanine anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4'-dihydroxyphenylalanine formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-3',4'-dihydroxyphenylalanine synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018067"}


id: PBO:0044657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dCTP pyrophosphatase 1","termid":"PBO:0044657"}


id: PBO:0000587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Gos1 (predicted)","termid":"PBO:0000587"}


id: PBO:0071424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 30","termid":"PBO:0071424"}


id: FYPO:0002559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to actomyosin contractile ring","synonyms":[{"name":"normal protein localisation to actomyosin contractile ring","type":"exact"},{"name":"normal protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"normal protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"normal protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"normal protein localization to contractile ring","type":"exact"},{"name":"normal protein localization to cytokinetic contractile ring","type":"exact"},{"name":"normal protein localization to mitotic contractile ring","type":"exact"},{"name":"normal protein recruitment to actomyosin contractile ring","type":"related"}],"termid":"FYPO:0002559"}


id: PR:Q9Y7P3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptl1 gene.","definition_xrefs":["UniProtKB:Q9Y7P3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase C1450.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.16c","synonyms":[{"name":"Spom972h-ptl1","type":"exact"}],"termid":"PR:Q9Y7P3"}


id: GO:0044147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of structure involved in a symbiotic process","synonyms":[{"name":"negative regulation of development of symbiont during interaction with host","type":"related"},{"name":"negative regulation of development of symbiont involved in interaction with host","type":"related"}],"termid":"GO:0044147"}


id: PBO:0055161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2580","termid":"PBO:0055161"}


id: MONDO:0014708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 14 syndrome is characterized by intellectual deficit, retinal and skin pigmentation disorders, seizures, and dysmorphic features, including flat occiput, epicanthal folds, downward slanting eyes, flat nasal bridge, upturned nostrils, short neck, and large low set ears.","definition_xrefs":["Orphanet:1440"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"chromosome 14 disorder","termid":"MONDO:0700021"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 14","secondary_identifiers":["OMIM:616606","GARD:6072","MEDGEN:419284","MESH:C535487","UMLS:C2930916","ICD9:758.89","NORD:939","SCTID:702345009"],"synonyms":[{"name":"Chromosome 14 Ring","type":"exact"},{"name":"RING chromosome 14 syndrome","type":"related"},{"name":"Ring 14","type":"related"},{"name":"Ring chromosome type 14","type":"exact"},{"name":"chromosome 14 ring","type":"related"},{"name":"ring chromosome 14 syndrome, isolated cases","type":"exact"}],"termid":"MONDO:0014708","xrefs":{"Monarch":{"xref_id":"0014708"}}}


id: MONDO:0009475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isovaleric acidemia (IVA) is an autosomal recessively inherited organic aciduria characterized by a deficiency in isovaleryl-CoA dehydrogenase, that has wide clinical variability and that can present in infancy with acute manifestations of vomiting, failure to thrive, seizures, lethargy, a characteristic ''sweaty feet'' odor, acute pancreatitis and mild to severe developmental delay or in childhood with metabolic acidosis (brought on by prolonged fasting, an increased intake of protein-rich food or infections) and that can be fatal if not treated immediately. Chronic intermittent presentations and asymptomatic patients have also been reported.","definition_xrefs":["Orphanet:33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"isovaleric acidemia","secondary_identifiers":["DOID:14753","ICD10CM:E71.110","SCTID:87827003","NORD:712","NCIT:C98964","NANDO:1200798","OMIM:243500","MEDGEN:82822","MESH:C538167","NANDO:2200494","UMLS:C0268575","GARD:465"],"synonyms":[{"name":"IVA","type":"related"},{"name":"IVD deficiency","type":"related"},{"name":"Isovalericacidemia","type":"exact"},{"name":"isovaleric acid CoA dehydrogenase deficiency","type":"exact"},{"name":"isovaleric acid Coa dehydrogenase deficiency","type":"related"},{"name":"isovaleric acidemia","type":"exact"},{"name":"isovaleric aciduria","type":"exact"},{"name":"isovaleryl CoA carboxylase deficiency","type":"related"},{"name":"isovaleryl-CoA dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0009475","xrefs":{"Monarch":{"xref_id":"0009475"}}}


id: MOD:01458
data:
  {"annotated_genes":["SJAG_00733","SJAG_02522"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80797,80953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an acetyl group.","definition_xrefs":["OMSSA:10","Unimod:1#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylated residue","termid":"MOD:00408"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"alpha-amino acetylated residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"N2AcRes","type":"exact"},{"name":"ntermacetyl","type":"exact"}],"termid":"MOD:01458","terms_by_termid":{"MOD:00050":null}}


id: PBO:0048178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase regulator","termid":"PBO:0048178"}


id: GO:1900849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pseurotin A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"pseurotin A biosynthetic process","termid":"GO:1900790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of pseurotin A biosynthetic process","synonyms":[{"name":"regulation of Pseurotin anabolism","type":"related"},{"name":"regulation of Pseurotin biosynthesis","type":"related"},{"name":"regulation of Pseurotin biosynthetic process","type":"related"},{"name":"regulation of Pseurotin formation","type":"related"},{"name":"regulation of Pseurotin synthesis","type":"related"},{"name":"regulation of pseurotin A anabolism","type":"exact"},{"name":"regulation of pseurotin A biosynthesis","type":"exact"},{"name":"regulation of pseurotin A formation","type":"exact"},{"name":"regulation of pseurotin A synthesis","type":"exact"}],"termid":"GO:1900849"}


id: MONDO:0020191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyebrow/eyelashes pigmentation anomaly (obsolete MONDO:0020191)","secondary_identifiers":["Orphanet:98601"],"termid":"MONDO:0020191","xrefs":{"Monarch":{"xref_id":"0020191"}}}


id: GO:0045778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ossification","termid":"GO:0030278"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ossification","synonyms":[{"name":"activation of ossification","type":"narrow"},{"name":"positive regulation of bone biosynthesis","type":"exact"},{"name":"positive regulation of bone formation","type":"exact"},{"name":"stimulation of ossification","type":"narrow"},{"name":"up regulation of ossification","type":"exact"},{"name":"up-regulation of ossification","type":"exact"},{"name":"upregulation of ossification","type":"exact"}],"termid":"GO:0045778"}


id: PBO:0054533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1933","termid":"PBO:0054533"}


id: FYPO:0007146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abolished, and the protein is present in the cytoplasm instead, during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus, with protein mislocalized to cytoplasm, during meiotic cell cycle","synonyms":[{"name":"abolished protein localization in nucleus, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"exact"},{"name":"nuclear exclusion, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"related"},{"name":"nuclear protein exclusion, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"related"},{"name":"protein localization to nucleus abolished, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007146"}


id: GO:0102272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glutathionate + a poly gamma-glutamylcysteine-beta-alanine = glycine + a poly gamma-glutamylcysteine-beta-alanine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete homophytochelatin synthase activity (polymer-forming) (obsolete GO:0102272)","termid":"GO:0102272"}


id: PATO:0000999
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's successive change from one thing or state to another and back again.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternation","termid":"PATO:0000999"}


id: PBO:0029388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleoplasm","termid":"PBO:0029388"}


id: PBO:0051969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involucrin","termid":"PBO:0051969"}


id: MONDO:0000827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus salmonella.","definition_xrefs":["MESH:D012480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salmonellosis","secondary_identifiers":["UMLS:C0036117","MEDGEN:48542","Orphanet:795","DOID:0060859","ICD9:003.9","NCIT:C157974","ICD9:003.8","MedDRA:10039447","SCTID:302231008","ICD9:003.0"],"synonyms":[{"name":"Salmonella infection","type":"exact"},{"name":"infections, Salmonella","type":"related"},{"name":"rare form of salmonellosis","type":"exact"}],"termid":"MONDO:0000827","xrefs":{"Monarch":{"xref_id":"0000827"}}}


id: GO:0033701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-D-galactose + 2 NADP+ + H2O = dTDP-D-galacturonate + 2 NADPH + 2 H+.","definition_xrefs":["EC:1.1.1.186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dTDP-galactose 6-dehydrogenase activity","secondary_identifiers":["RHEA:12396","MetaCyc:DTDP-GALACTOSE-6-DEHYDROGENASE-RXN"],"synonyms":[{"name":"dTDP-D-galactose:NADP+ 6-oxidoreductase activity","type":"related"},{"name":"dTDPgalactose 6-dehydrogenase activity","type":"related"},{"name":"thymidine-diphosphate-galactose dehydrogenase activity","type":"related"}],"termid":"GO:0033701"}


id: MONDO:0016084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Crigler-Najjar syndrome (obsolete MONDO:0016084)","termid":"MONDO:0016084","xrefs":{"Monarch":{"xref_id":"0016084"}}}


id: GO:0021757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the caudate nucleus over time from its initial formation until its mature state. The caudate nucleus is the C-shaped structures of the striatum containing input neurons involved with control of voluntary movement in the brain.","definition_xrefs":["GOC:jid","ISBN:0878937420","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudate nucleus development","termid":"GO:0021757"}


id: GO:0002948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + 7-cyano-7-carbaguanine15 in tRNA + H2O = L-glutamate + archaeine15 in tRNA.","definition_xrefs":["RHEA:54084","PMID:20129918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"archaeosine synthase activity","secondary_identifiers":["EC:2.6.1.97","Wikipedia:Archaeosine_synthase"],"synonyms":[{"name":"ArcS","type":"related"},{"name":"glutamine:preQ0-tRNA amidinotransferase","type":"related"}],"termid":"GO:0002948"}


id: PBO:0034600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_double-strand_break_repair","termid":"PBO:0034600"}


id: GO:0120163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of cold-induced thermogenesis.","definition_xrefs":["PMID:27876809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cold-induced thermogenesis","termid":"GO:0120161"},{"relation_name":"negatively_regulates","term_name":"cold-induced thermogenesis","termid":"GO:0106106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cold-induced thermogenesis","synonyms":[{"name":"negative regulation of CIT","type":"related"}],"termid":"GO:0120163"}


id: FYPO:0002884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to osmotic stress. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000294","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal transcription during cellular response to osmotic stress","synonyms":[{"name":"normal transcription during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"normal transcription in response to osmotic stress","type":"exact"}],"termid":"FYPO:0002884"}


id: PBO:0089746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved triglyceride mobilization ICE2 family","termid":"PBO:0089746"}


id: GO:0051750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (3E,5Z)-dienoyl-CoA = a (2E,4E)-(5,6-saturated)-dienoyl-CoA.","definition_xrefs":["PMID:11278886","PMID:16040662","RHEA:45240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity","secondary_identifiers":["EC:5.3.3.21","GO:0008416"],"synonyms":[{"name":"delta(3,5),delta(2,4)-dienoyl-coenzyme A isomerase activity","type":"exact"},{"name":"delta3,5-delta2,4-dienoyl-CoA isomerase activity","type":"exact"},{"name":"delta5-delta2,4-dienoyl-CoA isomerase activity","type":"related"}],"termid":"GO:0051750"}


id: GO:0043273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + H2O = CDP + H+ + phosphate. May or may not be coupled to another reaction.","definition_xrefs":["RHEA:29387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase activity","termid":"GO:0017111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"CTPase activity","secondary_identifiers":["GO:0061747","GO:0061748"],"synonyms":[{"name":"CTPase activity, coupled","type":"related"},{"name":"cytidine triphosphatase activity","type":"exact"},{"name":"single-stranded DNA-dependent CTPase activity","type":"narrow"}],"termid":"GO:0043273"}


id: GO:0120070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any stomach fundus smooth muscle contraction.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stomach fundus smooth muscle contraction","termid":"GO:0120068"},{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"negatively_regulates","term_name":"stomach fundus smooth muscle contraction","termid":"GO:0014825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomach fundus smooth muscle contraction","termid":"GO:0120070"}


id: PBO:0071922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 7","termid":"PBO:0071922"}


id: GO:1900081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arginine catabolic process.","definition_xrefs":["GOC:dgf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"is_a","term_name":"regulation of arginine metabolic process","termid":"GO:0000821"},{"relation_name":"is_a","term_name":"regulation of amine catabolic process","termid":"GO:0033241"},{"relation_name":"regulates","term_name":"arginine catabolic process","termid":"GO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"regulation of arginine catabolic process","synonyms":[{"name":"regulation of arginine breakdown","type":"exact"},{"name":"regulation of arginine catabolism","type":"exact"},{"name":"regulation of arginine degradation","type":"exact"}],"termid":"GO:1900081"}


id: PBO:0116714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH eRNA associated with R-loop formation 1","termid":"PBO:0116714"}


id: MONDO:0004422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the falx cerebri.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior cranial fossa meningioma","termid":"MONDO:0002997"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral falx meningioma","secondary_identifiers":["UMLS:C1333597","DOID:7986","NCIT:C5267","MEDGEN:272627"],"synonyms":[{"name":"Falcine meningioma","type":"exact"},{"name":"falx cerebri meningioma","type":"exact"},{"name":"falx cerebri meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of falx cerebri","type":"exact"},{"name":"meningioma of cerebral falx","type":"exact"},{"name":"meningioma of falx cerebri","type":"exact"},{"name":"meningioma of falx of cerebrum","type":"exact"},{"name":"meningioma of the cerebral falx","type":"exact"},{"name":"meningioma of the falx cerebri","type":"exact"},{"name":"meningioma of the falx of the cerebrum","type":"exact"}],"termid":"MONDO:0004422","xrefs":{"Monarch":{"xref_id":"0004422"}}}


id: PR:O13703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein VTA1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00899","PANTHER:PTHR12741:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein vts1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.04c","secondary_identifiers":["UniProtKB:O13703"],"synonyms":[{"name":"Spom972h-VTA1","type":"exact"},{"name":"VPS20-associated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13703"}


id: PATO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"efficient","termid":"PATO:0001678"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased efficiency","synonyms":[{"name":"low efficiency","type":"exact"}],"termid":"PATO:0001675"}


id: MONDO:0017434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with limb duplication, polydactyly, syndactyly, and/or hyperphalangy (obsolete MONDO:0017434)","secondary_identifiers":["Orphanet:294959","icd11.foundation:1911144861"],"termid":"MONDO:0017434","xrefs":{"Monarch":{"xref_id":"0017434"}}}


id: PBO:0075388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP2 divergent transcript","termid":"PBO:0075388"}


id: MONDO:0018898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous lymphoma is a heterogeneous entity with respect to its clinical and pathological features, evolutive profile, prognosis, molecular etiology and response to therapy. These specifications have been taken into account in recent classifications, which have placed particular importance on the prognostic implications of these different entities.","definition_xrefs":["Orphanet:542"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"primary organ-specific lymphoma","termid":"MONDO:0017207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"primary cutaneous lymphoma","secondary_identifiers":["MEDGEN:220981","UMLS:C1302772","SCTID:400001003","NCIT:C7162","GARD:18698","MedDRA:10051708"],"synonyms":[{"name":"cutaneous (skin) lymphoma","type":"exact"},{"name":"primary cutaneous lymphoma","type":"exact"},{"name":"primary skin lymphoma","type":"exact"}],"termid":"MONDO:0018898","xrefs":{"Monarch":{"xref_id":"0018898"}}}


id: GO:0036193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-2H-1,4-benzoxazin-3(4H)-one + O2 + reduced [NADPH--hemoprotein reductase] = DIBOA + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-1,4-benzoxazin-3-one monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R07423","EC:1.14.14.110"],"termid":"GO:0036193"}


id: MONDO:0019460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute leukemia in which the blasts lack sufficient evidence to classify as myeloid or lymphoid or they have morphologic and/or immunophenotypic characteristics of both myeloid and lymphoid cells. (WHO, 2001)","definition_xrefs":["NCIT:C7464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute leukemia of ambiguous lineage","secondary_identifiers":["Orphanet:86851","MedDRA:10067399","icd11.foundation:1062906118","SCTID:721308005","NANDO:2200018","UMLS:C1301357","MEDGEN:226983","NANDO:2200017","GARD:8638"],"synonyms":[{"name":"ALL with myeloid markers","type":"related"},{"name":"AML with lymphoid markers","type":"related"},{"name":"BAL","type":"related"},{"name":"acute leukaemia of indeterminate lineage","type":"exact"},{"name":"acute leukaemia of undetermined lineage","type":"related"},{"name":"acute leukemia of ambiguous lineage","type":"exact"},{"name":"acute leukemia of indeterminate lineage","type":"exact"},{"name":"acute leukemia of undetermined lineage","type":"related"},{"name":"biphenotypic acute leukaemia","type":"related"},{"name":"biphenotypic acute leukemia","type":"related"},{"name":"hybrid acute leukaemia","type":"exact"},{"name":"hybrid acute leukemia","type":"exact"},{"name":"mixed lineage acute leukaemia","type":"exact"},{"name":"mixed lineage acute leukemia","type":"exact"},{"name":"mixed phenotype acute leukaemia","type":"related"},{"name":"mixed phenotype acute leukemia","type":"related"}],"termid":"MONDO:0019460","xrefs":{"Monarch":{"xref_id":"0019460"}}}


id: PBO:0062499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily D member 4","termid":"PBO:0062499"}


id: PBO:0065905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabaptin, RAB GTPase binding effector protein 1","termid":"PBO:0065905"}


id: MONDO:0022067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cantu Sanchez-Corona Fragoso syndrome","secondary_identifiers":["MEDGEN:419290","MESH:C535571","UMLS:C2930937"],"synonyms":[{"name":"severe mental deficiency proportionate dwarfism and delayed sexual maturation","type":"related"},{"name":"severe mental deficiency, proportionate dwarfism, and delayed sexual maturation","type":"related"}],"termid":"MONDO:0022067","xrefs":{"Monarch":{"xref_id":"0022067"}}}


id: PBO:0091969
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as SPNCRNA.503","termid":"PBO:0091969"}


id: PBO:0004977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase Tlh1","termid":"PBO:0004977"}


id: GO:0016429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methyladenine.","definition_xrefs":["EC:2.1.1.36"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (adenine-N1)-methyltransferase activity (obsolete GO:0016429)","synonyms":[{"name":"1-methyladenine transfer RNA methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-1-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-N1-)-methyltransferase activity","type":"related"},{"name":"adenine-1-methylase activity","type":"related"},{"name":"tRNA (adenine-N1-)-methyltransferase activity","type":"exact"},{"name":"transfer RNA (adenine-1) methyltransferase activity","type":"related"},{"name":"transfer ribonucleate adenine 1-methyltransferase activity","type":"related"}],"termid":"GO:0016429"}


id: PBO:0087385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol regulatory element binding protein; regulates transcription of sterol biosynthetic genes upon sterol depletion, after relocating from intracellular membranes to perinuclear foci; redundant activator of filamentation with UPC2, up-regulating the expression of genes involved in filamentous growth; contains Zn[2]-Cys[6] binuclear cluster; ECM22 has a paralog, UPC2, that arose from the whole genome duplication","termid":"PBO:0087385"}


id: PR:P28706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein complementing XP-G cells that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.08c","secondary_identifiers":["UniProtKB:P28706"],"synonyms":[{"name":"SPBC3E7.08c","type":"related"},{"name":"Spom972h-ERCC5","type":"exact"}],"termid":"PR:P28706"}


id: MONDO:0043494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting an artery.","definition_xrefs":["NCIT:C34399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arteritis","secondary_identifiers":["HP:0012089","MESH:D001167","EFO:0009011","MEDGEN:13916","SCTID:52089001","UMLS:C0003860"],"synonyms":[{"name":"Arteritides","type":"related"},{"name":"Inflammation, arterial","type":"related"},{"name":"arterial Inflammation","type":"related"},{"name":"arteritis","type":"exact"},{"name":"artery inflammation","type":"exact"},{"name":"inflammation of artery","type":"exact"}],"termid":"MONDO:0043494","xrefs":{"Monarch":{"xref_id":"0043494"}}}


id: MONDO:0009885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scott syndrome is an extremely rare congenital hemorrhagic disorder characterized by hemorrhagic episodes due to impaired platelet coagulant activity.","definition_xrefs":["Orphanet:806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Scott syndrome","secondary_identifiers":["SCTID:128098009","OMIM:262890","icd11.foundation:186013982","MEDGEN:167107","MESH:C563120","NANDO:2200671","UMLS:C0796149","GARD:4777","DOID:0111052"],"synonyms":[{"name":"BDPLT7","type":"exact"},{"name":"Platelet factor X receptor deficiency","type":"related"},{"name":"SCTS","type":"exact"},{"name":"Scott syndrome","type":"exact"},{"name":"bleeding Abnormality due to deficiency of Platelet binding of Factor 10","type":"related"},{"name":"bleeding abnormality due to deficiency of platelet biding of factor X","type":"exact"},{"name":"bleeding disorder, Platelet-type, 7","type":"related"},{"name":"familial prothrombin consumption inhibitor","type":"exact"},{"name":"familial prothrombin conversion defect","type":"exact"},{"name":"platelet-type bleeding disorder 7","type":"exact"},{"name":"prothrombin consumption deficiency","type":"exact"},{"name":"prothrombin consumption inhibitor, familial","type":"related"},{"name":"prothrombin conversion defect, familial","type":"related"}],"termid":"MONDO:0009885","xrefs":{"Monarch":{"xref_id":"0009885"}}}


id: MONDO:0014840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the TCF3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia 8, autosomal dominant","secondary_identifiers":["MEDGEN:934753","OMIM:616941","UMLS:C4310786","DOID:0081140","GARD:16171"],"synonyms":[{"name":"AGM8","type":"exact"},{"name":"TCF3 autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 8, autosomal dominant","type":"exact"},{"name":"agammaglobulinemia 8, autosomal dominant; AGM8","type":"exact"},{"name":"agammaglobulinemia, autosomal dominant, due to TCF3 defect","type":"related"},{"name":"autosomal agammaglobulinemia caused by mutation in TCF3","type":"exact"}],"termid":"MONDO:0014840","xrefs":{"Monarch":{"xref_id":"0014840"}}}


id: MONDO:0016906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 7q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the long arm (q) of chromosome 7. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 7q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 7","termid":"MONDO:0016872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 7","secondary_identifiers":["GARD:3765","MEDGEN:1825969","NCIT:C36408","UMLS:C5679676","Orphanet:262056","icd11.foundation:1458081087"],"synonyms":[{"name":"7q deletion","type":"related"},{"name":"7q monosomy","type":"related"},{"name":"del(7q)","type":"related"},{"name":"deletion 7q","type":"related"},{"name":"loss of chromosome 7q","type":"related"},{"name":"monosomy 7q","type":"related"},{"name":"partial deletion of chromosome 7q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 7","type":"exact"},{"name":"partial monosomy 7q","type":"related"},{"name":"partial monosomy of chromosome 7q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 7","type":"exact"}],"termid":"MONDO:0016906","xrefs":{"Monarch":{"xref_id":"0016906"}}}


id: GO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gene conversion process in which a segment of about 50-200 base pairs is transferred from the donor to the acceptor.","definition_xrefs":["PMID:16954385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"short tract gene conversion","termid":"GO:0035823"}


id: PBO:0065958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23 homolog B, nucleotide excision repair protein","termid":"PBO:0065958"}


id: GO:0018609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-unsubstituted benzenoid + O2 + NAD(P)H + H+ = 2,3-cis-dihydroxydihydrobenzenoid + NAD(P)+. Substrates include 1,4-dichlorobenzene (forms 3,6-dichloro-cis-1,2-dihydroxycyclohexa-3,5-diene), 1,2,3,4-tetrachlorobenzene (forms cis-chlorobenzene dihydrodiol) and 1,2,4-trichlorobenzene (forms 3,4,6-trichloro-cis-1,2-dihydroxycyclohexa-3,5-diene).","definition_xrefs":["UM-BBD_enzymeID:e0062"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorobenzene dioxygenase activity (obsolete GO:0018609)","termid":"GO:0018609"}


id: GO:0033285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + monocarboxylic acid(out/in) = ADP + phosphate + monocarboxylic acid(in/out).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled monocarboxylic acid transmembrane transporter activity","synonyms":[{"name":"ATP-dependent monocarboxylic acid transmembrane transporter activity","type":"exact"},{"name":"monocarboxylic acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0033285"}


id: GO:0003009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control.","definition_xrefs":["GOC:mtg_cardio","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"musculoskeletal movement","termid":"GO:0050881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle contraction","termid":"GO:0003009"}


id: PBO:0068243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal pseudogene 5","termid":"PBO:0068243"}


id: PBO:0090601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Dcr2","termid":"PBO:0090601"}


id: PBO:0066577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB pseudogene 1","termid":"PBO:0066577"}


id: PBO:0089485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair","termid":"PBO:0089485"}


id: GO:0071706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any member of the TNF superfamily due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"TNF superfamily production","type":"related"},{"name":"TNFSF cytokine production","type":"exact"}],"termid":"GO:0071706"}


id: PBO:0073434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 4","termid":"PBO:0073434"}


id: MONDO:0021201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the skin, caused by bacteria, viruses, parasites, or fungi. Examples of bacterial infection include carbuncles, furuncles, impetigo, erysipelas, and abscesses. Examples of viral infection include shingles, warts, molluscum contagiosum, and pityriasis rosea. Examples of parasitic infection include scabies and lice. Examples of fungal infection include athlete's foot, yeast infection, and ringworm.","definition_xrefs":["NCIT:C35025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin infection","secondary_identifiers":["SCTID:19824006","UMLS:C0037278","MEDGEN:52365"],"synonyms":[{"name":"skin infection","type":"exact"}],"termid":"MONDO:0021201","xrefs":{"Monarch":{"xref_id":"0021201"}}}


id: PBO:0012550
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septum promoting GTPase","termid":"PBO:0012550"}


id: GO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a H2A-H2B histone dimer from a nucleosome within chromatin.","definition_xrefs":["PMID:17496903","PMID:21807128","GOC:krc","PMID:15525516"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-H2B dimer displacement (obsolete GO:0001208)","termid":"GO:0001208"}


id: GO:0048894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an efferent axon in a lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the efferent axons in any lateral line nerve.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron axonogenesis","termid":"GO:0021955"},{"relation_name":"part_of","term_name":"lateral line nerve development","termid":"GO:0048892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"efferent axon development in a lateral line nerve","termid":"GO:0048894"}


id: GO:0060389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group on to a pathway restricted SMAD protein. A pathway restricted SMAD protein is an effector protein that acts directly downstream of the transforming growth factor family receptor.","definition_xrefs":["GOC:dph","ISBN:3527303782"],"gene_count":0,"genotype_count":0,"name":"obsolete pathway-restricted SMAD protein phosphorylation (obsolete GO:0060389)","synonyms":[{"name":"R-SMAD protein phosphorylation","type":"exact"},{"name":"pathway restricted SMAD protein phosphorylation","type":"exact"},{"name":"receptor regulated SMAD protein phosphorylation","type":"exact"},{"name":"receptor-regulated SMAD protein phosphorylation","type":"exact"}],"termid":"GO:0060389"}


id: MONDO:0007708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kasabach-Merritt syndrome (KMS), also known as hemangioma-thrombocytopenia syndrome, is a rare disorder characterized by profound thrombocytopenia, microangiopathic hemolytic anemia, and subsequent consumptive coagulopathy in association with vascular tumors, particularly kaposiform hemangioendothelioma or tufted angioma.","definition_xrefs":["Orphanet:2330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kasabach-Merritt syndrome","secondary_identifiers":["OMIM:141000","UMLS:C0221025","NCIT:C3821","MESH:D059885","GARD:70","MEDGEN:65122","icd11.foundation:2059601885","NANDO:2201035","NORD:1320","ICD9:287.39","SCTID:86635005","MedDRA:10058423","NANDO:2100297"],"synonyms":[{"name":"KMP","type":"related"},{"name":"Kasabach Merritt phenomenon","type":"exact"},{"name":"Kasabach Merritt syndrome","type":"exact"},{"name":"Kasabach-Merritt Phenomenon","type":"exact"},{"name":"Kasabach-Merritt syndrome","type":"exact"},{"name":"hemangioma thrombocytopenia syndrome","type":"related"},{"name":"hemangioma-hemorrhage syndrome","type":"exact"},{"name":"hemangioma-thrombocytopenia syndrome","type":"exact"},{"name":"hemangiomatosis with thrombocytopenia","type":"exact"},{"name":"thrombocytopenia-hemangioma syndrome","type":"exact"},{"name":"thrombopenia-hemangioma syndrome","type":"exact"}],"termid":"MONDO:0007708","xrefs":{"Monarch":{"xref_id":"0007708"}}}


id: GO:0021620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the hypoglossal nerve. This process pertains to the initial formation of a structure from unspecified parts. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","ISBN:0838580343","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"hypoglossal nerve morphogenesis","termid":"GO:0021618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve formation","synonyms":[{"name":"CN XII biosynthesis","type":"related"},{"name":"CN XII formation","type":"related"}],"termid":"GO:0021620"}


id: PBO:0108551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone for translation factor EF2, armadillo-type fold, Hgh1","termid":"PBO:0108551"}


id: PBO:0088361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Utp23","termid":"PBO:0088361"}


id: PBO:0085875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0085875"}


id: MONDO:0013650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypotrichosis that has material basis in an autosomal recessive mutation on chromosome 7p22.3-p21.3.","definition_xrefs":["DOID:0110707","PMID:20544222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hypotrichosis simplex","termid":"MONDO:0018914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 10","secondary_identifiers":["OMIM:614238","GARD:15782","MEDGEN:481883","UMLS:C3280253"],"synonyms":[{"name":"HYPT10","type":"exact"},{"name":"hypotrichosis 10","type":"exact"},{"name":"hypotrichosis type 10","type":"exact"},{"name":"hypt10","type":"exact"}],"termid":"MONDO:0013650","xrefs":{"Monarch":{"xref_id":"0013650"}}}


id: PBO:0034743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRP-like ion calcium channel Pkd2","termid":"PBO:0034743"}


id: PBO:0089992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small-subunit processome, UTP-C complex subunit Utp22","termid":"PBO:0089992"}


id: PBO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.1","termid":"PBO:0000393"}


id: MONDO:0957453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare open neural tube defect characterized by no other malformation than myelomeningocele (spina bifida with a neural placode exposed at the top of a non-epidermised dysplasic meninges sac and Chiari II malformation).","definition_xrefs":["Orphanet:645383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelomeningocele","termid":"MONDO:0019773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"true myelomeningocele","secondary_identifiers":["UMLS:C5816713","MEDGEN:1843418"],"termid":"MONDO:0957453","xrefs":{"Monarch":{"xref_id":"0957453"}}}


id: PBO:0034776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Vps902","termid":"PBO:0034776"}


id: PBO:0060170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maturin, neural progenitor differentiation regulator homolog","termid":"PBO:0060170"}


id: GO:0046785
data:
  {"annotated_genes":["SJAG_01756","SJAG_02761","SJAG_03540","SJAG_03835","SJAG_02609","SJAG_02886","SJAG_02737","SJAG_00856","SJAG_07018","SJAG_02624","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79793],"is_not":false,"summary":null,"term":"GO:0046785"},{"annotations":[117270],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[71488,72066,79361],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[106774,117275,101309,100705,117520,100409],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[101310,118995],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The addition of tubulin heterodimers to one or both ends of a microtubule.","definition_xrefs":["GOC:ai","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"microtubule polymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"microtubule assembly","type":"exact"},{"name":"microtubule formation","type":"related"}],"termid":"GO:0046785","terms_by_termid":{"GO:0007020":null,"GO:0030954":null,"GO:0046785":null,"GO:0051415":null,"GO:0051417":null}}


id: PBO:0071458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 64","termid":"PBO:0071458"}


id: MOD:00477
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts, by oxidative decarboxylation, an L-proline residue to 2-pyrrolidone with breakage of the peptide chain.","definition_xrefs":["PubMed:9252331","Unimod:360#P","PubMed:2161657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated residue","termid":"MOD:00683"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-pyrrolidone","synonyms":[{"name":"Pro->Pyrrolidinone","type":"related"},{"name":"Proline oxidation to pyrrolidinone","type":"related"}],"termid":"MOD:00477"}


id: PBO:0058048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4269","termid":"PBO:0058048"}


id: MONDO:0003116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete calciphylaxis (obsolete MONDO:0003116)","termid":"MONDO:0003116","xrefs":{"Monarch":{"xref_id":"0003116"}}}


id: RO:0008508
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which organism a lays eggs on the outside surface of organism b. Organism b is neither helped nor harmed in the process of egg laying or incubation.","direct_ancestors":[{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_eggs_laid_on_by","termid":"RO:0008508"}


id: GO:0071081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the tetraspanin CD63.","definition_xrefs":["PMID:7629079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha3-beta1 integrin-CD63 complex","synonyms":[{"name":"ITGA3-ITGB1-CD63 complex","type":"narrow"}],"termid":"GO:0071081"}


id: GO:0070129
data:
  {"annotated_genes":["SJAG_01517","SJAG_03550","SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99027,113004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[100783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"regulation of mitochondrial gene expression","termid":"GO:0062125"},{"relation_name":"regulates","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01249":null,"SJAG_01517":null,"SJAG_03550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"regulation of mitochondrial translation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial protein anabolism","type":"exact"},{"name":"regulation of mitochondrial protein biosynthesis","type":"exact"},{"name":"regulation of mitochondrial protein formation","type":"exact"},{"name":"regulation of mitochondrial protein synthesis","type":"exact"}],"termid":"GO:0070129","terms_by_termid":{"GO:0070131":null,"GO:0070134":null}}


id: PBO:0056686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 6","termid":"PBO:0056686"}


id: GO:0009397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of folic acid and its derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"folic acid-containing compound catabolic process","synonyms":[{"name":"folate and derivative catabolic process","type":"exact"},{"name":"folate and derivative catabolism","type":"exact"},{"name":"folate-containing compound catabolic process","type":"exact"},{"name":"folate-containing compound catabolism","type":"exact"},{"name":"folic acid and derivative catabolic process","type":"exact"},{"name":"folic acid and derivative catabolism","type":"exact"},{"name":"folic acid-containing compound breakdown","type":"exact"},{"name":"folic acid-containing compound catabolism","type":"exact"},{"name":"folic acid-containing compound degradation","type":"exact"},{"name":"vitamin B9 and derivative catabolic process","type":"exact"},{"name":"vitamin B9 and derivative catabolism","type":"exact"},{"name":"vitamin M and derivative catabolic process","type":"exact"},{"name":"vitamin M and derivative catabolism","type":"exact"}],"termid":"GO:0009397"}


id: MONDO:0018852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achromatopsia (ACHM) is a rare autosomal recessive retinal disorder characterized by color blindness, nystagmus, photophobia, and severely reduced visual acuity due to the absence or impairment of cone function.","definition_xrefs":["Orphanet:49382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color vision disorder","termid":"MONDO:0001703"},{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"achromatopsia","secondary_identifiers":["MedDRA:10000454","ICD9:368.54","ICD10CM:H53.51","NCIT:C84528","DOID:13911","GARD:15015","MEDGEN:57751","UMLS:C0152200","SCTID:102450007"],"synonyms":[{"name":"ACHM","type":"exact"},{"name":"Pingelapese blindness","type":"exact"},{"name":"Rod monochromacy","type":"exact"},{"name":"Rod monochromatism","type":"exact"},{"name":"achromatopsia","type":"exact"},{"name":"complete or incomplete color blindness","type":"exact"},{"name":"complete or incomplete colour blindness","type":"exact"},{"name":"monochromatism","type":"exact"},{"name":"total color blindness","type":"exact"},{"name":"total colour blindness","type":"exact"}],"termid":"MONDO:0018852","xrefs":{"Monarch":{"xref_id":"0018852"}}}


id: MONDO:0021834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by frontal bossing, cloudy corneae, low nasal ridge, and micrognathia, hypoplastic thorax, and rhizomelic micromelia.","definition_xrefs":["PMID:8989469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Akaba Hayasaka syndrome","secondary_identifiers":["MESH:C535609","MEDGEN:443940","UMLS:C2930948"],"synonyms":[{"name":"frontal bossing, cloudy corneae, low nasal ridge, and micrognathia, hypoplastic thorax, and rhizomelic micromelia","type":"related"}],"termid":"MONDO:0021834","xrefs":{"Monarch":{"xref_id":"0021834"}}}


id: PBO:0082728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rix1 complex and pre-replicative complexes (pre-RCs); required for processing of ITS2 sequences from 35S pre-rRNA; component of the pre-60S ribosomal particle with the dynein-related AAA-type ATPase Mdn1p; required for pre-RC formation and maintenance during DNA replication licensing; highly conserved protein which contains several WD40 motifs; IPI3 is an essential gene; other members include Rix1p, Ipi1p, and Ipi3p","termid":"PBO:0082728"}


id: MONDO:0021191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant ependymoma (obsolete MONDO:0021191)","termid":"MONDO:0021191","xrefs":{"Monarch":{"xref_id":"0021191"}}}


id: GO:0009130
data:
  {"annotated_genes":["SJAG_00694","SJAG_04627","SJAG_04487","SJAG_04713","SJAG_03771","SJAG_03164","SJAG_00197","SJAG_00444","SJAG_03708","SJAG_00964","SJAG_04354","SJAG_04709","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61234,59498,61990,57233,59164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[68203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[70267,79816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[70266,79789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[68204,93296,92293,88771,87779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate biosynthetic process","termid":"GO:0009124"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate metabolic process","termid":"GO:0009129"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_03771":null,"SJAG_04354":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine nucleoside monophosphate anabolism","type":"exact"},{"name":"pyrimidine nucleoside monophosphate biosynthesis","type":"exact"},{"name":"pyrimidine nucleoside monophosphate formation","type":"exact"},{"name":"pyrimidine nucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009130","terms_by_termid":{"GO:0006226":null,"GO:0006231":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null}}


id: GO:0032682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of chemokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"negatively_regulates","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine production","secondary_identifiers":["GO:0045079","GO:0090198"],"synonyms":[{"name":"down regulation of chemokine production","type":"exact"},{"name":"down-regulation of chemokine production","type":"exact"},{"name":"downregulation of chemokine production","type":"exact"},{"name":"inhibition of chemokine production","type":"narrow"},{"name":"negative regulation of chemokine biosynthetic process","type":"narrow"},{"name":"negative regulation of chemokine secretion","type":"narrow"}],"termid":"GO:0032682"}


id: GO:0004080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + biotin + apo-(propanoyl-CoA:carbon-dioxide ligase (ADP-forming)) = AMP + diphosphate + (propanoyl-CoA:carbon-dioxide ligase (ADP-forming)).","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity (obsolete GO:0004080)","termid":"GO:0004080"}


id: PBO:0088284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase Pgm2","termid":"PBO:0088284"}


id: GO:0004076
data:
  {"annotated_genes":["SJAG_01935"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79676],"is_not":false,"summary":null,"term":"GO:0004076"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (4R,5S)-dethiobiotin + [sulfur carrier]-SH + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = [sulfur carrier]-H + biotin + 2 5'-deoxyadenosine + 2 L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["EC:2.8.1.6","RHEA:22060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01935":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"biotin synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01078","MetaCyc:2.8.1.6-RXN"],"synonyms":[{"name":"biotin synthetase activity","type":"related"},{"name":"dethiobiotin:sulfur sulfurtransferase activity","type":"related"}],"termid":"GO:0004076","terms_by_termid":{"GO:0004076":null}}


id: PBO:0062092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 42 pseudogene","termid":"PBO:0062092"}


id: MONDO:0012861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the FIGLA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 6","secondary_identifiers":["DOID:0080863","MEDGEN:394115","MESH:C567351","OMIM:612310","UMLS:C2676742"],"synonyms":[{"name":"FIGLA primary ovarian failure","type":"exact"},{"name":"Pof6","type":"related"},{"name":"premature ovarian failure 6","type":"exact"},{"name":"premature ovarian failure type 6","type":"exact"},{"name":"primary ovarian failure caused by mutation in FIGLA","type":"exact"}],"termid":"MONDO:0012861","xrefs":{"Monarch":{"xref_id":"0012861"}}}


id: RO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A broad relationship between an exposure event or process and any agent, stimulus, activity, or event that causes stress or tension on an organism and interacts with an exposure receptor during an exposure event.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_exposure_stimulus","termid":"RO:0002309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_stressor","termid":"RO:0002241"}


id: PBO:0070621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 5","termid":"PBO:0070621"}


id: PBO:0028468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_cytoplasmic_microtubules","termid":"PBO:0028468"}


id: MONDO:0005223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia (AML) in which the blasts do not show evidence of myeloid differentiation by morphology and conventional cytochemistry. (WHO, 2001)","definition_xrefs":["NCIT:C8460"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia with minimal differentiation","secondary_identifiers":["MONDO:0020318","UMLS:C0522631","NANDO:2200004","MEDGEN:101100","DOID:0081085","GARD:19588","EFO:0003026","ONCOTREE:AMLMD","Orphanet:98832","icd11.foundation:1468530237","ICDO:9872/3"],"synonyms":[{"name":"AML M0","type":"exact"},{"name":"AML with minimal differentiation","type":"exact"},{"name":"AMLMD","type":"related"},{"name":"M0 acute granulocytic leukaemia","type":"exact"},{"name":"M0 acute granulocytic leukaemia with minimal differentiation","type":"exact"},{"name":"M0 acute granulocytic leukemia","type":"exact"},{"name":"M0 acute granulocytic leukemia with minimal differentiation","type":"exact"},{"name":"M0 acute myeloblastic leukaemia","type":"exact"},{"name":"M0 acute myeloblastic leukemia","type":"exact"},{"name":"M0 acute myelocytic leukaemia","type":"exact"},{"name":"M0 acute myelocytic leukemia","type":"exact"},{"name":"M0 acute myelogenous leukaemia","type":"exact"},{"name":"M0 acute myelogenous leukaemia with minimal differentiation","type":"exact"},{"name":"M0 acute myelogenous leukemia","type":"exact"},{"name":"M0 acute myelogenous leukemia with minimal differentiation","type":"exact"},{"name":"M0 myeloid leukaemia","type":"exact"},{"name":"M0 myeloid leukaemia with minimal differentiation","type":"exact"},{"name":"M0 myeloid leukemia","type":"exact"},{"name":"M0 myeloid leukemia with minimal differentiation","type":"exact"},{"name":"acute myeloblastic leukaemia with minimal differentiation","type":"exact"},{"name":"acute myeloblastic leukemia with minimal differentiation","type":"exact"},{"name":"acute myeloblastic leukemia, minimally differentiated","type":"exact"},{"name":"acute myelocytic leukaemia with minimal differentiation","type":"exact"},{"name":"acute myelocytic leukemia with minimal differentiation","type":"exact"},{"name":"acute myelogenous leukaemia with minimal differentiation","type":"exact"},{"name":"acute myelogenous leukemia with minimal differentiation","type":"exact"},{"name":"acute myeloid leukaemia with minimal differentiation (MO)","type":"exact"},{"name":"acute myeloid leukemia with minimal differentiation","type":"exact"},{"name":"acute myeloid leukemia with minimal differentiation (MO)","type":"exact"},{"name":"acute myeloid leukemia, minimally differentiated","type":"exact"},{"name":"minimally differentiated acute myeloblastic leukaemia","type":"exact"},{"name":"minimally differentiated acute myeloblastic leukemia","type":"exact"}],"termid":"MONDO:0005223","xrefs":{"Monarch":{"xref_id":"0005223"}}}


id: GO:0097547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic vesicle composed of both tubulovesicular and clear core vesicles that transport synaptic vesicle-associated proteins. Proteins carried by synaptic vesicle protein transport vesicles (STVs) include synaptophysin, synapsin Ia, synaptotagmin and synaptobrevin/vesicle-associated membrane protein 2 (VAMP2). STVs are packaged via the trans-Golgi network before being transported through the axon.","definition_xrefs":["PMID:21569270","GOC:dr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"synaptic vesicle protein transport vesicle","synonyms":[{"name":"STV","type":"exact"}],"termid":"GO:0097547"}


id: PBO:0077016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS3 antisense RNA 1","termid":"PBO:0077016"}


id: MONDO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition characterized by the unequivocal presence of both testicular and ovarian tissues in an individual. It is usually manifested with ambiguous external genitalia.","definition_xrefs":["NCIT:C85207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of sexual differentiation","termid":"MONDO:0002145"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"true hermaphroditism","secondary_identifiers":["UMLS:C0266361","MEDGEN:78595","SCTID:237821001","DOID:3763"],"synonyms":[{"name":"hermaphroditism","type":"exact"},{"name":"ovotestis","type":"exact"},{"name":"true hermaphroditism","type":"exact"}],"termid":"MONDO:0002768","xrefs":{"Monarch":{"xref_id":"0002768"}}}


id: FYPO:0006972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-cysteine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-cysteine level","synonyms":[{"name":"decreased cellular S-adenosyl-L-cysteine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosyl-L-cysteine level during vegetative growth","type":"exact"},{"name":"decreased level of S-adenosyl-L-cysteine in cell","type":"exact"},{"name":"reduced cellular S-adenosyl-L-cysteine level","type":"exact"}],"termid":"FYPO:0006972"}


id: GO:0018151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a protein cross-link.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-histidyl-L-tyrosine (obsolete GO:0018151)","termid":"GO:0018151"}


id: GO:0033973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dCTP + 2 H2O = diphosphate + dUMP + H+ + NH4.","definition_xrefs":["RHEA:19205","EC:3.5.4.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"dCTP deaminase (dUMP-forming) activity","secondary_identifiers":["KEGG_REACTION:R07307","MetaCyc:3.5.4.30-RXN"],"synonyms":[{"name":"dCTP aminohydrolase (dUMP-forming) activity","type":"related"}],"termid":"GO:0033973"}


id: PBO:0044514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC motif containing zinc binding protein","termid":"PBO:0044514"}


id: PBO:0003932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein (predicted)","termid":"PBO:0003932"}


id: PBO:0052306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0232","termid":"PBO:0052306"}


id: MONDO:0100202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar disk herniation, susceptibility to","secondary_identifiers":["MEDGEN:393597","UMLS:C2676840"],"termid":"MONDO:0100202","xrefs":{"Monarch":{"xref_id":"0100202"}}}


id: GO:0030287
data:
  {"annotated_genes":["SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113662,113663],"is_not":false,"summary":null,"term":"GO:0030287"}]},"cv_name":"cellular_component","definition":"The region between the plasma membrane and the cell wall in organisms lacking an outer cell membrane such as yeast and Gram positive bacteria. The region is thinner than the equivalent in Gram negative bacteria.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periplasmic space","termid":"GO:0042597"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell wall-bounded periplasmic space","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IWZ","type":"narrow"},{"name":"cell wall bounded periplasmic space","type":"exact"},{"name":"cell wall-enclosed periplasmic space","type":"exact"},{"name":"inner wall zone","type":"narrow"}],"termid":"GO:0030287","terms_by_termid":{"GO:0030287":null}}


