# terms

id: PBO:0043100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 12","termid":"PBO:0043100"}


id: PBO:0060373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myozenin 3","termid":"PBO:0060373"}


id: PATO:0000022
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000022 gametophytic compatability (obsolete PATO:0000022)","termid":"PATO:0000022"}


id: MONDO:0006724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete desmoplastic small round cell tumor (obsolete MONDO:0006724)","termid":"MONDO:0006724","xrefs":{"Monarch":{"xref_id":"0006724"}}}


id: PBO:0117033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYRM9 antisense RNA 1","termid":"PBO:0117033"}


id: PBO:0066179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 4B","termid":"PBO:0066179"}


id: PBO:0040094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 1","termid":"PBO:0040094"}


id: PBO:0074128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 31 member 1","termid":"PBO:0074128"}


id: GO:0007603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototransduction","termid":"GO:0007602"},{"relation_name":"is_a","term_name":"detection of visible light","termid":"GO:0009584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phototransduction, visible light","secondary_identifiers":["Reactome:R-HSA-2187338"],"synonyms":[{"name":"visual cascade","type":"exact"},{"name":"visual transduction","type":"exact"}],"termid":"GO:0007603"}


id: MONDO:0012409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated microphthalmia in which the cause of the disease is a mutation in the VSX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 2","secondary_identifiers":["DOID:0060839","MEDGEN:351204","UMLS:C1864720","MESH:C566446","OMIM:610093"],"synonyms":[{"name":"MCOP2","type":"exact"},{"name":"VSX2 isolated microphthalmia","type":"exact"},{"name":"anophthalmia, clinical, isolated","type":"related"},{"name":"isolated microphthalmia caused by mutation in VSX2","type":"exact"},{"name":"isolated microphthalmia type 2","type":"exact"},{"name":"microphthalmia, isolated 2","type":"related"},{"name":"microphthalmia, isolated type 2","type":"exact"}],"termid":"MONDO:0012409","xrefs":{"Monarch":{"xref_id":"0012409"}}}


id: PBO:0053479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 452","termid":"PBO:0053479"}


id: PBO:0069176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 430, pseudogene","termid":"PBO:0069176"}


id: PBO:0079477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWSG1 divergent transcript","termid":"PBO:0079477"}


id: FYPO:0000029
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119890,119888,119889],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome segregation is abnormal. Chromosome segregation begins with the alignment of chromosomes at the metaphase plate, includes sister chromatid separation, and ends when chromosomes have completed movement to the spindle poles.","definition_xrefs":["GO:0007059","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromosome segregation","references_by_uniquename":{"PMID:24184107":null},"secondary_identifiers":["FYPO:0000226"],"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"centromere function defective","type":"related"},{"name":"chromosome missegregation","type":"related"},{"name":"chromosome segregation defects","type":"exact"},{"name":"chromosome segregation: abnormal","type":"related"}],"termid":"FYPO:0000029","terms_by_termid":{"FYPO:0000671":null}}


id: PBO:0050429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPK antisense RNA 1","termid":"PBO:0050429"}


id: SO:0000688
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A set of subregions selected from sequence contigs which when concatenated form a nonredundant linear sequence.","definition_xrefs":["SO:ls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golden_path","synonyms":[{"name":"golden path","type":"exact"}],"termid":"SO:0000688"}


id: PBO:0066824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 123","termid":"PBO:0066824"}


id: PBO:0030178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_3'-5'-exoribonuclease_activity","termid":"PBO:0030178"}


id: GO:0071723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopeptide, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds and containing a nonprotein group consisting of a lipid or lipids.","definition_xrefs":["PMID:2757794","PMID:12524386","PMID:12077222","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"lipopeptide binding","synonyms":[{"name":"bacterial lipopeptide binding","type":"narrow"},{"name":"bacterial lipoprotein binding","type":"related"}],"termid":"GO:0071723"}


id: FYPO:0002849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved when the cell population has been in stationary phase and is then placed in conditions that allow recovery. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"curved cell during recovery from stationary phase","synonyms":[{"name":"comma-shaped cell during recovery from stationary phase","type":"exact"},{"name":"curved cell during recovery from stationary phase during mitotic cell cycle","type":"related"},{"name":"curved cell during vegetative growth following stationary phase","type":"exact"}],"termid":"FYPO:0002849"}


id: PBO:0084178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone acetyltransferase catalytic subunit of NuA3 complex; acetylates histone H3, involved in transcriptional silencing; homolog of the mammalian MOZ proto-oncogene; mutant has aneuploidy tolerance; sas3gcn5 double mutation is lethal","termid":"PBO:0084178"}


id: PBO:0045682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 2","termid":"PBO:0045682"}


id: MONDO:0000777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A allergic disease that involves the digestive tract.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"gastrointestinal allergy","secondary_identifiers":["DOID:0060502","MEDGEN:1843477","UMLS:C0221034"],"synonyms":[{"name":"allergic disease of digestive tract","type":"exact"},{"name":"digestive tract allergic disease","type":"exact"}],"termid":"MONDO:0000777","xrefs":{"Monarch":{"xref_id":"0000777"}}}


id: GO:1990682
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a macrophage colony-stimulating factor (CSF1, also called M-CSF) dimer bound to a dimerized receptor (CSF1R, also called FMS). Receptor dimerization requires the presence of the ligand.","definition_xrefs":["GOC:BHF","PMID:19017797","GOC:bf","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CSF1-CSF1R complex","synonyms":[{"name":"CSF1:C-FMS complex","type":"exact"},{"name":"M-CSF:C-FMS complex","type":"related"},{"name":"M-CSF:CSF1R complex","type":"related"},{"name":"M-CSF:FMS complex","type":"exact"},{"name":"macrophage colony-stimulating factor:receptor complex","type":"exact"}],"termid":"GO:1990682"}


id: PBO:0000842
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.2","termid":"PBO:0000842"}


id: GO:0006541
data:
  {"annotated_genes":["SJAG_00964","SJAG_02276","SJAG_00359","SJAG_04054","SJAG_03266","SJAG_00392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57565,72254,72732],"is_not":false,"summary":null,"term":"GO:0006541"},{"annotations":[72565,118063,94596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[71681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_00392":null,"SJAG_00964":null,"SJAG_02276":null,"SJAG_03266":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"glutamine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glutamine metabolism","type":"exact"}],"termid":"GO:0006541","terms_by_termid":{"GO:0006541":null,"GO:0006542":null,"GO:0019676":null}}


id: PBO:0072057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 27","termid":"PBO:0072057"}


id: RO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"RO:0002216"},{"relation_name":"is_a","term_name":"part_of_structure_that_is_capable_of","termid":"RO:0002329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","termid":"RO:0002326"}


id: MONDO:1012967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver disorder, non-human animal","termid":"MONDO:1012967","xrefs":{"Monarch":{"xref_id":"1012967"}}}


id: PBO:0046015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2AK1 pseudogene 1","termid":"PBO:0046015"}


id: GO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host-derived membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host bacteroid-containing symbiosome","termid":"GO:0043663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host peribacteroid membrane","termid":"GO:0043664"}


id: PBO:0065412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 1","termid":"PBO:0065412"}


id: GO:0006509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain).","definition_xrefs":["PMID:24227200","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein proteolysis","termid":"GO:0033619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane protein ectodomain proteolysis","synonyms":[{"name":"ectoderm shedding","type":"broad"},{"name":"ectodomain cleavage","type":"exact"},{"name":"membrane protein solubilization","type":"related"},{"name":"receptor shedding","type":"related"}],"termid":"GO:0006509"}


id: PBO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3","termid":"PBO:0000176"}


id: MONDO:0021050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the vagina. Representative examples of benign neoplasms include squamous papilloma and melanocytic nevus. Representative examples of malignant neoplasms include carcinoma, melanoma, and sarcoma.","definition_xrefs":["NCIT:C3437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal neoplasm","secondary_identifiers":["MEDGEN:22608","ONCOTREE:VULVA","UMLS:C0042258","SCTID:126921000","ICD9:239.5","EFO:1001447"],"synonyms":[{"name":"neoplasm of the vagina","type":"exact"},{"name":"neoplasm of vagina","type":"exact"},{"name":"tumor of the vagina","type":"exact"},{"name":"tumor of vagina","type":"exact"},{"name":"tumour of the vagina","type":"exact"},{"name":"tumour of vagina","type":"exact"},{"name":"vagina neoplasm","type":"exact"},{"name":"vagina neoplasm (disease)","type":"exact"},{"name":"vagina tumor","type":"exact"},{"name":"vagina tumour","type":"exact"},{"name":"vaginal neoplasm","type":"exact"},{"name":"vaginal tumor","type":"exact"},{"name":"vaginal tumour","type":"exact"}],"termid":"MONDO:0021050","xrefs":{"Monarch":{"xref_id":"0021050"}}}


id: GO:0004179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal amino acid, Xaa-Xbb- from a peptide, amide or arylamide. Xaa is preferably Ala, but may be most amino acids including Pro (slow action). When a terminal hydrophobic residue is followed by a prolyl residue, the two may be released as an intact Xaa-Pro dipeptide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane alanyl aminopeptidase activity (obsolete GO:0004179)","synonyms":[{"name":"membrane alanyl aminopeptidase activity","type":"exact"}],"termid":"GO:0004179"}


id: PBO:0017925
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thei gene was called cdc2L (cdc2 left) in PMID:16453669, name not added as potentially misleading","termid":"PBO:0017925"}


id: PBO:0045714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 2","termid":"PBO:0045714"}


id: PBO:0048042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous sheath interacting protein 2 like, pseudogene","termid":"PBO:0048042"}


id: MONDO:0021258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic choroid disorder","termid":"MONDO:0001898"},{"relation_name":"is_a","term_name":"uvea neoplasm","termid":"MONDO:0021225"},{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"choroid neoplasm","secondary_identifiers":["MEDGEN:3059","NCIT:C2949","UMLS:C0008523"],"synonyms":[{"name":"choroid tumor","type":"exact"},{"name":"choroid tumour","type":"exact"},{"name":"choroidal neoplasm","type":"exact"},{"name":"choroidal tumor","type":"exact"},{"name":"choroidal tumour","type":"exact"},{"name":"neoplasm of choroid","type":"exact"},{"name":"neoplasm of optic choroid","type":"exact"},{"name":"neoplasm of the choroid","type":"exact"},{"name":"optic choroid neoplasm","type":"exact"},{"name":"optic choroid neoplasm (disease)","type":"exact"},{"name":"optic choroid tumor","type":"exact"},{"name":"optic choroid tumour","type":"exact"},{"name":"tumor of choroid","type":"exact"},{"name":"tumor of optic choroid","type":"exact"},{"name":"tumor of the choroid","type":"exact"},{"name":"tumour of choroid","type":"exact"},{"name":"tumour of optic choroid","type":"exact"},{"name":"tumour of the choroid","type":"exact"}],"termid":"MONDO:0021258","xrefs":{"Monarch":{"xref_id":"0021258"}}}


id: SO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant with in the CDS that causes in frame elongation of the resulting polypeptide sequence at the C terminus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated_polypeptide_C_terminal","termid":"SO:0001610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_in_frame_polypeptide_C_terminal","synonyms":[{"name":"elongated in frame polypeptide C terminal","type":"exact"}],"termid":"SO:0001612"}


id: PBO:0072666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 receptor like 1","termid":"PBO:0072666"}


id: GO:0016324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the plasma membrane located at the apical end of the cell.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"apical plasma membrane","termid":"GO:0016324"}


id: GO:0043315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of neutrophil degranulation","termid":"GO:0043313"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"neutrophil degranulation","termid":"GO:0043312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of neutrophil degranulation","synonyms":[{"name":"activation of neutrophil degranulation","type":"narrow"},{"name":"positive regulation of neutrophil granule exocytosis","type":"exact"},{"name":"stimulation of neutrophil degranulation","type":"narrow"},{"name":"up regulation of neutrophil degranulation","type":"exact"},{"name":"up-regulation of neutrophil degranulation","type":"exact"},{"name":"upregulation of neutrophil degranulation","type":"exact"}],"termid":"GO:0043315"}


id: GO:0035392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The maintenance of chromatin in a transcriptionally silent state such as heterochromatin at the telomere.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of chromatin silencing at telomere (obsolete GO:0035392)","termid":"GO:0035392"}


id: GO:0008779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + O-(2-acyl-sn-glycero-3-phospho)ethanolamine = [acyl-carrier protein] + O-(1-beta-acyl-2-acyl-sn-glycero-3-phospho)ethanolamine.","definition_xrefs":["EC:2.3.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity","secondary_identifiers":["RHEA:10304","MetaCyc:ACYLGPEACYLTRANS-RXN"],"synonyms":[{"name":"acyl-ACP-phospholipid O-acyltransferase activity","type":"exact"},{"name":"acyl-[acyl-carrier protein]-phospholipid O-acyltransferase activity","type":"exact"},{"name":"acyl-acyl-carrier-protein-phospholipid O-acyltransferase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:O-(2-acyl-sn-glycero-3-phospho)-ethanolamine O-acyltransferase activity","type":"related"}],"termid":"GO:0008779"}


id: GO:0140730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of amphiregulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Amphiregulin (AREG) is a ligand of the epidermal growth factor receptor (EGFR), a widely expressed transmembrane tyrosine kinase. AREG is synthesized as a membrane-anchored precursor protein that can engage in juxtacrine signaling on adjacent cells. Alternatively, after proteolytic processing by cell membrane proteases, mainly TACE/ADAM17, AREG is secreted and behaves as an autocrine or paracrine factor.","definition_xrefs":["PMID:24463227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"amphiregulin production","synonyms":[{"name":"AREG production","type":"broad"}],"termid":"GO:0140730"}


id: FYPO:0001990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) at a pH lower than that of standard S. pombe growth medium (abut 5.8).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal cell population growth at low pH","synonyms":[{"name":"normal growth at low pH","type":"broad"},{"name":"normal vegetative cell population growth at low pH","type":"exact"}],"termid":"FYPO:0001990"}


id: GO:0035970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-L-threonine to form peptidyl-threonine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine dephosphorylation","termid":"GO:0035970"}


id: MONDO:0014596
data:
  {"annotated_genes":["SJAG_01825"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85590],"is_not":false,"summary":null,"term":"MONDO:0014596"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 7 with cerebellar hypoplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225359","OMIM:616342","DOID:0112231","MEDGEN:895680"],"synonyms":[{"name":"LIS7","type":"related"},{"name":"lissencephaly 7 with cerebellar hypoplasia","type":"exact"}],"termid":"MONDO:0014596","terms_by_termid":{"MONDO:0014596":null},"xrefs":{"Monarch":{"xref_id":"0014596"}}}


id: PBO:0069797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1083, pseudogene","termid":"PBO:0069797"}


id: PBO:0029996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_P-bodies_during_glucose_starvation","termid":"PBO:0029996"}


id: GO:0061352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the outgrowing Malpighian tubule guided by specific chemical cues/signals. Movement may be towards a guidance cue (positive chemotaxis) or away from it (negative chemotaxis). Guidance contributes to the final positioning of the tubule.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"is_a","term_name":"cell rearrangement involved in Malpighian tubule morphogenesis","termid":"GO:0061334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis involved in Malpighian tubule morphogenesis","termid":"GO:0061352"}


id: PBO:0073451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor SWAP","termid":"PBO:0073451"}


id: PATO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000173 function (obsolete PATO:0000173)","termid":"PATO:0000173"}


id: PBO:0005671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase Dfr1","termid":"PBO:0005671"}


id: GO:0009514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized form of peroxisome that contains the enzymes of the glyoxylate pathway. The glyoxysome is found in some plant cells, notably the cells of germinating seeds.","definition_xrefs":["GOC:dhl","ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"glyoxysome","secondary_identifiers":["Wikipedia:Glyoxysome"],"termid":"GO:0009514"}


id: GO:0047783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: corticosterone + reduced adrenal ferredoxin + O2 = 18-hydroxycorticosterone + oxidized adrenal ferredoxin + H2O.","definition_xrefs":["EC:1.14.15.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"corticosterone 18-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN66-360","RHEA:11872"],"synonyms":[{"name":"corticosterone 18-hydroxylase activity","type":"exact"},{"name":"corticosterone methyl oxidase activity","type":"related"},{"name":"corticosterone,reduced-adrenal-ferredoxin:oxygen oxidoreductase (18-hydroxylating)","type":"related"}],"termid":"GO:0047783"}


id: PBO:0058757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6881","termid":"PBO:0058757"}


id: PBO:0056768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 21A, HSPA lysine","termid":"PBO:0056768"}


id: MONDO:0019276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inherited epidermolysis bullosa (EB) encompasses a number of disorders characterized by recurrent blister formation as the result of structural fragility within the skin and selected other tissues.","definition_xrefs":["Orphanet:79361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa","termid":"MONDO:0006541"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"inherited epidermolysis bullosa","secondary_identifiers":["GARD:18992","SCTID:402781004","ICD9:757.39","MEDGEN:697573","UMLS:C1274224"],"synonyms":[{"name":"epidermolysis bullosa hereditaria","type":"exact"},{"name":"hereditary epidermolysis bullosa","type":"exact"}],"termid":"MONDO:0019276","xrefs":{"Monarch":{"xref_id":"0019276"}}}


id: MONDO:0017463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudoarthrosis of the limbs","termid":"MONDO:0015525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of the femur","secondary_identifiers":["UMLS:C5679939","GARD:21204","Orphanet:295020","MEDGEN:1843312"],"synonyms":[{"name":"congenital pseudarthrosis of the femur","type":"exact"}],"termid":"MONDO:0017463","xrefs":{"Monarch":{"xref_id":"0017463"}}}


id: PBO:0064919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 3B","termid":"PBO:0064919"}


id: FYPO:0001086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal glucosyltransferase activity","termid":"FYPO:0001086"}


id: PBO:0072849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 4","termid":"PBO:0072849"}


id: PBO:0046593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 3","termid":"PBO:0046593"}


id: PBO:0055204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2629","termid":"PBO:0055204"}


id: GO:0009113
data:
  {"annotated_genes":["SJAG_01859","SJAG_01081","SJAG_03140","SJAG_02364","SJAG_01814","SJAG_01661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60141,114835],"is_not":false,"summary":null,"term":"GO:0009113"},{"annotations":[71002,110692,117684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[74280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"},{"relation_name":"is_a","term_name":"nucleobase biosynthetic process","termid":"GO:0046112"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-841"],"synonyms":[{"name":"purine base anabolism","type":"exact"},{"name":"purine base biosynthesis","type":"exact"},{"name":"purine base biosynthetic process","type":"exact"},{"name":"purine base formation","type":"exact"},{"name":"purine base synthesis","type":"exact"}],"termid":"GO:0009113","terms_by_termid":{"GO:0006168":null,"GO:0009113":null,"GO:0046084":null}}


id: GO:0016887
data:
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ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.","definition_xrefs":["RHEA:13065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase activity","termid":"GO:0017111"},{"relation_name":"part_of","term_name":"ATP-dependent 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id: PBO:0005382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp2 (predicted)","termid":"PBO:0005382"}


id: PR:000035414
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic checkpoint serine/threonine-protein kinase BUB1 unphosphorylated form in Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic checkpoint serine/threonine-protein kinase BUB1 unphosphorylated form (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.12c","synonyms":[{"name":"Spom972h-BUB1/PhosRes-","type":"exact"}],"termid":"PR:000035414"}


id: GO:0035984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichostatin A stimulus.","definition_xrefs":["PMID:20181743","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to trichostatin A","termid":"GO:0035983"},{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to trichostatin A","termid":"GO:0035984"}


id: PBO:0003971
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab Escort Protein","termid":"PBO:0003971"}


id: GO:0102607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3beta-hydroxy-12,15-cassadiene-11-one + NADPH + O2 + H+ = 2beta,3beta-dihydroxy-12,15-cassadiene-11-one + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3beta-hydroxy-12,15-cassadiene-11-one 2-hydroxylase activity (obsolete GO:0102607)","termid":"GO:0102607"}


id: PBO:0003495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF ubiquitin ligase complex subunit Skp1","termid":"PBO:0003495"}


id: GO:0061132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of two or more cells or tissues that causes the cells of the gut to change their fates and specify the development of the pancreas.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ induction","termid":"GO:0001759"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"positive regulation of epithelial tube formation","termid":"GO:1905278"},{"relation_name":"positively_regulates","term_name":"pancreas field specification","termid":"GO:0061131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas induction","termid":"GO:0061132"}


id: GO:1903816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collecting lymphatic vessel constriction.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23897233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of collecting lymphatic vessel constriction","termid":"GO:1903814"},{"relation_name":"positively_regulates","term_name":"collecting lymphatic vessel constriction","termid":"GO:1990192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collecting lymphatic vessel constriction","synonyms":[{"name":"activation of collecting lymphatic vessel constriction","type":"narrow"},{"name":"activation of lymphatic vessel myogenic constriction","type":"narrow"},{"name":"positive regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"up regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"up regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"up-regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"up-regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"upregulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"upregulation of lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1903816"}


id: PBO:0083437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOL036W","termid":"PBO:0083437"}


id: PBO:0088899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fen1 family nuclease, XP-G family","termid":"PBO:0088899"}


id: PBO:0059011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane metalloendopeptidase like 1","termid":"PBO:0059011"}


id: GO:0102184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cycloartenol + NADH + O2 + H+ = 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cycloartenol 4alpha-methyl oxidase activity (obsolete GO:0102184)","termid":"GO:0102184"}


id: PBO:0067019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 32, pseudogene","termid":"PBO:0067019"}


id: MONDO:0020067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute infectious process that affects the brain tissue. It is usually caused by viruses and less often by bacteria, parasites, and fungi.","definition_xrefs":["NCIT:C79550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious encephalitis","secondary_identifiers":["ICD9:049.8","ICD9:323.4","MEDGEN:108917","UMLS:C0596773","SCTID:312215006","MESH:D000069544"],"synonyms":[{"name":"encephalitis infection","type":"exact"}],"termid":"MONDO:0020067","xrefs":{"Monarch":{"xref_id":"0020067"}}}


id: GO:0036179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an osteoclast cell to attain its fully functional state. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue, and which typically differentiates from monocytes.","definition_xrefs":["GOC:pg","CL:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"osteoclast development","termid":"GO:0036035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast maturation","synonyms":[{"name":"chondroclast maturation","type":"related"}],"termid":"GO:0036179"}


id: FYPO:0002533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abnormal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide","synonyms":[{"name":"abnormal protein localisation to nucleoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during cellular response to H2O2","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0002533"}


id: PATO:0002431
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in which the bearer possesses a gradual, yet distinct, thinning from a wide starting point.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waisted","termid":"PATO:0002431"}


id: PBO:0055748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA regulator of Akt signaling associated with HCC and RCC","termid":"PBO:0055748"}


id: PBO:0052772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 64","termid":"PBO:0052772"}


id: PBO:0058751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6875","termid":"PBO:0058751"}


id: GO:0030148
data:
  {"annotated_genes":["SJAG_03015","SJAG_02885","SJAG_02168","SJAG_01356","SJAG_00176","SJAG_00880","SJAG_01057","SJAG_04178","SJAG_00506","SJAG_05311","SJAG_02429","SJAG_04878","SJAG_02085","SJAG_01857","SJAG_02717","SJAG_00630","SJAG_01300","SJAG_02488","SJAG_04550","SJAG_02842","SJAG_02706","SJAG_04913","SJAG_03953","SJAG_03690","SJAG_01219","SJAG_03076","SJAG_02305","SJAG_04986"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73337,73365,73924,77932,92268,93880,98522,100569,101737,109945,111651,117844],"is_not":false,"summary":null,"term":"GO:0030148"},{"annotations":[78338,74619,77190,79394,109144,79220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[92129,95468,97826,112867,79690,95577,75846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[74033,97224,77189,110039,79219,106317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"membrane lipid biosynthetic process","termid":"GO:0046467"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00506":null,"SJAG_00630":null,"SJAG_00880":null,"SJAG_01057":null,"SJAG_01219":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01857":null,"SJAG_02085":null,"SJAG_02168":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02488":null,"SJAG_02706":null,"SJAG_02717":null,"SJAG_02842":null,"SJAG_02885":null,"SJAG_03015":null,"SJAG_03076":null,"SJAG_03690":null,"SJAG_03953":null,"SJAG_04178":null,"SJAG_04550":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_04986":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5129","Reactome:R-HSA-1660661"],"synonyms":[{"name":"sphingolipid anabolism","type":"exact"},{"name":"sphingolipid biosynthesis","type":"exact"},{"name":"sphingolipid formation","type":"exact"},{"name":"sphingolipid synthesis","type":"exact"}],"termid":"GO:0030148","terms_by_termid":{"GO:0030148":null,"GO:0046512":null,"GO:0046513":null,"GO:0051999":null}}


id: PBO:0053367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 279","termid":"PBO:0053367"}


id: PBO:0073496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small G protein signaling modulator 2","termid":"PBO:0073496"}


id: PBO:0060074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 21","termid":"PBO:0060074"}


id: GO:0019741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"},{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pentacyclic triterpenoid catabolic process","synonyms":[{"name":"pentacyclic triterpenoid breakdown","type":"exact"},{"name":"pentacyclic triterpenoid catabolism","type":"exact"},{"name":"pentacyclic triterpenoid degradation","type":"exact"}],"termid":"GO:0019741"}


id: PBO:0068548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 154, pseudogene","termid":"PBO:0068548"}


id: PBO:0074919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 88C","termid":"PBO:0074919"}


id: MONDO:1011308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital nervous system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308","xrefs":{"Monarch":{"xref_id":"1011308"}}}


id: GO:0021777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to its commitment to an association neuron fate.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","PMID:12593981","GO_REF:0000021","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in spinal cord association neuron specification (obsolete GO:0021777)","synonyms":[{"name":"BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"}],"termid":"GO:0021777"}


id: MONDO:1010044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microvillus inclusion disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvillus inclusion disease, non-human animal","secondary_identifiers":["OMIA:002247"],"termid":"MONDO:1010044","xrefs":{"Monarch":{"xref_id":"1010044"}}}


id: PBO:0088027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-snRNP associated splicing factor; similar to the mammalian splicing factor SAP49; proposed to function as a U2-snRNP assembly factor along with Hsh155p and binding partner Cus1p; contains two RNA recognition motifs (RRM)","termid":"PBO:0088027"}


id: PBO:0066542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 7","termid":"PBO:0066542"}


id: FYPO:0004630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during meiotic cell cycle","type":"related"},{"name":"decreased transcript level during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004630"}


id: FYECO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where glycerol is the main carbon source, but the medium also contained trace amounts of glucose (<0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol MM with trace glucose","synonyms":[{"name":"glycerol main carbon source + very low glucose MM","type":"exact"},{"name":"glycerol minimal medium with trace glucose","type":"exact"}],"termid":"FYECO:0000072"}


id: PBO:0053761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1003","termid":"PBO:0053761"}


id: PBO:0084786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial porin (voltage-dependent anion channel); outer membrane protein required for maintenance of mitochondrial osmotic stability and mitochondrial membrane permeability; couples the glutathione pools of the intermembrane space (IMS) and the cytosol; interacts with Om45 and Om14 in the outer membrane; phosphorylated; protein abundance increases in response to DNA replication stress","termid":"PBO:0084786"}


id: PBO:0078024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 14","termid":"PBO:0078024"}


id: FYPO:0001683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle assembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"mitotic spindle absent from cell","termid":"FYPO:0002018"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000641","FYPO:0000054","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic spindle assembly","synonyms":[{"name":"abolished mitotic spindle assembly during vegetative growth","type":"exact"},{"name":"abolished spindle assembly during mitotic cell cycle","type":"related"},{"name":"spindle assembly involved in mitosis abolished","type":"exact"}],"termid":"FYPO:0001683"}


id: GO:0070973
data:
  {"annotated_genes":["SJAG_03244","SJAG_00284"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71287,78541],"is_not":false,"summary":null,"term":"GO:0070973"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at an endoplasmic reticulum exit site.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_03244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to endoplasmic reticulum exit site","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protein localisation to endoplasmic reticulum exit site","type":"exact"},{"name":"protein localization to ER exit site","type":"exact"}],"termid":"GO:0070973","terms_by_termid":{"GO:0070973":null}}


id: GO:0006115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ethanol biosynthetic process","synonyms":[{"name":"ethanol anabolism","type":"exact"},{"name":"ethanol biosynthesis","type":"exact"},{"name":"ethanol formation","type":"exact"},{"name":"ethanol synthesis","type":"exact"}],"termid":"GO:0006115"}


id: PBO:0080374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog A","termid":"PBO:0080374"}


id: GO:0097254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of substances from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine. Substances that are secreted include organic anions, ammonia, potassium and drugs.","definition_xrefs":["GOC:rph","PMID:25287933","Wikipedia:Renal_secretion#Secretion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal tubular secretion","termid":"GO:0097254"}


id: GO:0009769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"After a photon of light is absorbed by one of the many chlorophyll molecules, in one of the light-harvesting complexes of an antenna on photosystem II, some of the absorbed energy is transferred to the pair of chlorophyll molecules in the reaction center.","definition_xrefs":["ISBN:0816017360","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthesis, light harvesting","termid":"GO:0009765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthesis, light harvesting in photosystem II","termid":"GO:0009769"}


id: PBO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (predicted)","termid":"PBO:0001076"}


id: PBO:0042710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELSR1 pseudogene 1","termid":"PBO:0042710"}


id: PBO:0078751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 12 homolog","termid":"PBO:0078751"}


id: PBO:0086850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology, premeiotic replication, and sporulation","termid":"PBO:0086850"}


id: GO:0030789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin 4.","definition_xrefs":["EC:2.1.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"precorrin-3B C17-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.131-RXN","RHEA:12761"],"synonyms":[{"name":"CobJ","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-3B C17-methyltransferase activity","type":"related"},{"name":"precorrin-3 methylase activity","type":"related"},{"name":"precorrin-3 methyltransferase activity","type":"related"}],"termid":"GO:0030789"}


id: PBO:0113311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrial function; interacts with Hsp82p and copurifies with Ipl1p; expression is copper responsive and downregulated in strains deleted for MAC1, a copper-responsive transcription factor; role in preventing L-A mycovirus pathogenesis; human homolog MYG1 is linked to developmental processes and dermatological diseases, complements yeast null mutant","termid":"PBO:0113311"}


id: PBO:0060918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 5","termid":"PBO:0060918"}


id: MONDO:0018840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital disorder usually inherited in an autosomal recessive pattern. It affects the hepatobiliary system and the kidneys. It is characterized by liver fibrosis, portal hypertension, and renal cysts.","definition_xrefs":["NCIT:C97071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"},{"relation_name":"is_a","term_name":"cirrhosis, familial","termid":"MONDO:0007329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"isolated congenital hepatic fibrosis","secondary_identifiers":["NORD:1225","NANDO:2100267","SCTID:79607001","MESH:C562378","Orphanet:485426","UMLS:C0009714","ICD9:777.8","GARD:21995","NANDO:2200936","MEDGEN:40449"],"synonyms":[{"name":"Congenital Hepatic Fibrosis","type":"exact"},{"name":"congenital fibrose liver","type":"related"},{"name":"congenital hepatic fibrosis","type":"exact"},{"name":"isolated CHF","type":"broad"},{"name":"nonsyndromic congenital hepatic fibrosis","type":"exact"}],"termid":"MONDO:0018840","xrefs":{"Monarch":{"xref_id":"0018840"}}}


id: FYPO:0006450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a gene product that executes histone H3 acetyltransferase activity is altered. For example, preference for modified (e.g. methylated) H3 molecules may be enhanced or diminished.","definition_xrefs":["PMID:26401015","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered substrate specificity","termid":"FYPO:0003347"},{"relation_name":"is_a","term_name":"abnormal histone acetyltransferase activity","termid":"FYPO:0006453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0005447","FYPO:0000641","FYPO:0000654","FYPO:0000661","FYPO:0000002"],"is_obsolete":false,"name":"altered histone H3 acetyltransferase substrate specificity","synonyms":[{"name":"altered H3 histone acetyltransferase substrate specificity","type":"exact"}],"termid":"FYPO:0006450"}


id: PBO:0054102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1461","termid":"PBO:0054102"}


id: PBO:0090367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human KIN ortholog","termid":"PBO:0090367"}


id: GO:0047764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + caldesmon = ADP + caldesmon phosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete caldesmon kinase activity (obsolete GO:0047764)","termid":"GO:0047764"}


id: PBO:0041753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium activated nucleotidase 1","termid":"PBO:0041753"}


id: GO:0047109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethyl (S)-3-hydroxyhexanoate + NADP+ = ethyl 3-oxohexanoate + H+ + NADPH.","definition_xrefs":["RHEA:18269","EC:1.1.1.280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(S)-3-hydroxyacid-ester dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04106","MetaCyc:1.2.1.56-RXN"],"synonyms":[{"name":"(S)-3-hydroxyacid ester dehydrogenase activity","type":"exact"},{"name":"3-oxo ester (S)-reductase activity","type":"related"},{"name":"ethyl-(S)-3-hydroxyhexanoate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047109"}


id: PBO:0011450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.55","termid":"PBO:0011450"}


id: GO:0160201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle found in a microsporidian spore,  that swells with water, and exerts pressure to rupture the polar cap and evert the polar tube through which the sporoplasm escapes to infect the host.","definition_xrefs":["PMID:16005007","PMID:19673893","Wikipedia:polaroplast"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polaroplast","termid":"GO:0160201"}


id: PBO:0059446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A19, pseudogene","termid":"PBO:0059446"}


id: PBO:0084988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent serine dehydrogenase and carbonyl reductase; acts on serine, L-allo-threonine, and other 3-hydroxy acids; green fluorescent protein fusion protein localizes to the cytoplasm and nucleus; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0084988"}


id: PBO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GDA1","termid":"PBO:0001129"}


id: FYPO:0001407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing glucose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on glucose carbon source","secondary_identifiers":["FYPO:0001163","FYPO:0001161"],"synonyms":[{"name":"decreased aerobic cell population growth on glucose carbon source","type":"narrow"},{"name":"decreased growth on glucose carbon source","type":"broad"},{"name":"decreased hypoxic cell population growth on glucose carbon source","type":"narrow"},{"name":"decreased vegetative cell growth on glucose carbon source","type":"exact"},{"name":"reduced cell growth on glucose carbon source","type":"exact"},{"name":"slow cell growth on glucose carbon source","type":"narrow"}],"termid":"FYPO:0001407"}


id: PBO:0091082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Dms1 ortholog, syntenic position (possible gene prediction error)","termid":"PBO:0091082"}


id: GO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary axonal complex over time, from its formation to the mature structure. The mammillary axonal complex is formed by the axons from the lateral, medial mammillary and the dorsal premammillary nuclei which share a branching pattern. Every neuron gives off one axonal stem that bifurcates into 2 branches. One of the branches is directed dorsally to the thalamus and another caudally to the midbrain.","definition_xrefs":["GOC:yaf","GOC:dph","PMID:10662642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary body development","termid":"GO:0021767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary axonal complex development","termid":"GO:0061373"}


id: PBO:0090085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Yip1/Gem2","termid":"PBO:0090085"}


id: MONDO:0011787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of autosomal recessive limb-girdle muscular dystrophy that presents a highly variable age of onset and phenotypic spectrum typically characterized by slowly progressive proximal weakness of the pelvic and shoulder girdle musculature (predominantly affecting the lower limbs), frequently associated with waddling gait, scapular winging, calf and tongue hypertrophy, exercise-induced myalgia, and myoglobinuria and/or elevated creatine kinase serum levels. Abdominal muscle weakness, cardiomyopathy, respiratory muscle involvement and various brain abnormalities have also been reported.","definition_xrefs":["Orphanet:34515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of FKRP","termid":"MONDO:0016156"},{"relation_name":"is_a","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0024322","MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2I","secondary_identifiers":["NCIT:C126739","MESH:C564612","DOID:0110299","MEDGEN:339580","SCTID:718180000","UMLS:C1846672","OMIM:607155","GARD:12533"],"synonyms":[{"name":"FKRP autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD-FKRP related","type":"exact"},{"name":"LGMD2I","type":"exact"},{"name":"MDDGC5","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in FKRP","type":"exact"},{"name":"limb-girdle muscular dystrophy due to FKRP deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2I","type":"related"},{"name":"muscular dystrophy limb-girdle type 2I","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2I","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (Limb-girdle) type C, 5","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle) type C 5","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 5","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), type C5","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy limb-girdle FRKP-related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, limb-girdle, Frkp-related","type":"related"}],"termid":"MONDO:0011787","xrefs":{"Monarch":{"xref_id":"0011787"}}}


id: GO:0060176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aggregation during sorocarp development. Aggregation involved in sorocarp development is the process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"aggregation involved in sorocarp development","termid":"GO:0031152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"}


id: GO:2000810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tight junction assembly.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"regulates","term_name":"bicellular tight junction assembly","termid":"GO:0070830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of bicellular tight junction assembly","secondary_identifiers":["Reactome:R-HSA-8935964"],"synonyms":[{"name":"regulation of tight junction formation","type":"exact"}],"termid":"GO:2000810"}


id: PATO:0001627
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wholeness quality inhering in a bearer by virtue of the bearer's has enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sufficiency","termid":"PATO:0001626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sufficient","synonyms":[{"name":"adequate","type":"related"}],"termid":"PATO:0001627"}


id: MONDO:0019009
data:
  {"annotated_genes":["SJAG_05346","SJAG_03067","SJAG_02723","SJAG_00289","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86936,86935,86934,86933,86937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011818"}]},"cv_name":"mondo","definition":"Isolated focal cortical dysplasia is a rare, genetic, non-syndromic cerebral malformation due to abnormal neuronal migration disorder characterized by variable-sized, focalized malformations located in any part(s) of the cerebral cortex, which manifests with drug-resistant epilepsy (usually leading to intellectual disability) and behavioral disturbances. Abnormal MRI findings (e.g. abnormal white and/or gray matter signal, blurred gray-white matter junction, localized volume loss, cortical thickening, abnormal gyral pattern, abnormal hippocampus) and variable histopathologic patterns are associated.","definition_xrefs":["Orphanet:65683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortical dysplasia","termid":"MONDO:0017094"},{"relation_name":"is_a","term_name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","termid":"MONDO:0100283"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200564","UMLS:C4707795","GARD:16671","MEDGEN:1645432","SCTID:766710005"],"synonyms":[{"name":"epilepsy due to FCD","type":"exact"}],"termid":"MONDO:0019009","terms_by_termid":{"MONDO:0011818":null},"xrefs":{"Monarch":{"xref_id":"0019009"}}}


id: GO:0046717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of acid by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"acid secretion","termid":"GO:0046717"}


id: PBO:0042118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 190","termid":"PBO:0042118"}


id: FYPO:0002010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein encoded by genes normally induced during iron ion starvation measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased level of iron ion starvation-induced proteins","synonyms":[{"name":"increased level of iron ion depletion-induced proteins","type":"exact"},{"name":"increased level of iron ion deprivation-induced proteins","type":"exact"},{"name":"increased level of iron ion starvation-induced proteins during mitotic cell cycle","type":"related"},{"name":"increased level of iron ion starvation-induced proteins during vegetative growth","type":"exact"},{"name":"increased level of proteins expressed during iron ion starvation","type":"exact"},{"name":"increased level of proteins induced by iron ion starvation","type":"exact"},{"name":"increased protein level of genes (normally) induced during iron starvation","type":"exact"}],"termid":"FYPO:0002010"}


id: MONDO:0033551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 72 with autoinflammation","secondary_identifiers":["OMIM:618982","MEDGEN:1749856","UMLS:C5436540","DOID:0112015"],"synonyms":[{"name":"IMD72","type":"related"},{"name":"IMMUNODEFICIENCY 72 WITH AUTOINFLAMMATION","type":"related"}],"termid":"MONDO:0033551","xrefs":{"Monarch":{"xref_id":"0033551"}}}


id: PBO:0048618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gypsy retrotransposon integrase 1","termid":"PBO:0048618"}


id: MONDO:0011245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"KID syndrome","termid":"MONDO:0018781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis, hystrix-like, with hearing loss","secondary_identifiers":["MEDGEN:355410","MESH:C566528","UMLS:C1865234","OMIM:602540","GARD:15349"],"synonyms":[{"name":"HID syndrome","type":"related"},{"name":"hystrix-like ichthyosis with deafness","type":"exact"},{"name":"ichthyosis, hystrix-like, with deafness","type":"narrow"}],"termid":"MONDO:0011245","xrefs":{"Monarch":{"xref_id":"0011245"}}}


id: PBO:0081503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 407","termid":"PBO:0081503"}


id: MONDO:0014348
data:
  {"annotated_genes":["SJAG_01570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86723],"is_not":false,"summary":null,"term":"MONDO:0014348"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the PGAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 42","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22564","MEDGEN:862780","UMLS:C4014343","OMIM:615802"],"synonyms":[{"name":"MRT42","type":"related"},{"name":"PGAP1 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in PGAP1","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 9","type":"related"},{"name":"intellectual disability, autosomal recessive 42","type":"exact"},{"name":"intellectual disability, autosomal recessive type 42","type":"exact"},{"name":"mental retardation, autosomal recessive 42","type":"related"},{"name":"mental retardation, autosomal recessive type 42","type":"exact"},{"name":"neurodevelopmental disorder with dysmorphic features, spasticity, and brain abnormalities","type":"exact"}],"termid":"MONDO:0014348","terms_by_termid":{"MONDO:0014348":null},"xrefs":{"Monarch":{"xref_id":"0014348"}}}


id: PBO:0050155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 11","termid":"PBO:0050155"}


id: MONDO:0013115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"RIN2 syndrome, formerly known as macrocephaly, alopecia, cutis laxa and scoliosis (MACS) syndrome, is a very rare inherited connective tissue disorder characterized by macrocephaly, sparse scalp hair, soft-redundant and hyperextensible skin, joint hypermobility, and scoliosis. Patients have progressive facial coarsening with downslanted palpebral fissures, upper eyelid fullness/infraorbital folds, thick/everted vermillion, gingival overgrowth and abnormal position of the teeth. Rarer manifestations such as abnormal high-pitched voice, bronchiectasis, hypergonadotropic hypergonadism and brachydactyly have also been reported.","definition_xrefs":["Orphanet:217335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RIN2 syndrome","secondary_identifiers":["MEDGEN:416526","GARD:17120","UMLS:C2751321","SCTID:723367005","MESH:C567770","OMIM:613075"],"synonyms":[{"name":"MACS syndrome","type":"exact"},{"name":"RIN2 deficiency","type":"exact"},{"name":"RIN2 syndrome","type":"exact"},{"name":"macrocephaly, alopecia, cutis laxa, and scoliosis","type":"related"},{"name":"macrocephaly-alopecia-cutis laxa-scoliosis syndrome","type":"exact"},{"name":"tall forehead, sparse hair, skin hyperextensibility, and scoliosis","type":"related"},{"name":"tall forehead-sparse hair-skin hyperextensibility-scoliosis syndrome","type":"exact"}],"termid":"MONDO:0013115","xrefs":{"Monarch":{"xref_id":"0013115"}}}


id: PBO:0038724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 19","termid":"PBO:0038724"}


id: GO:0052486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the innate immune response of the symbiont organism, the symbiont's first line of defense against infection. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont innate immunity (obsolete GO:0052486)","synonyms":[{"name":"negative regulation by organism of symbiont innate immunity","type":"exact"},{"name":"negative regulation of symbiont innate immune response","type":"exact"}],"termid":"GO:0052486"}


id: PATO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's being not filed with air.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninflated","termid":"PATO:0002377"}


id: GO:0002454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deletion of B cells by apoptotic process occurring as part of peripheral tolerance induction and B cell selection.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:jal","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deletion","termid":"GO:0002516"},{"relation_name":"part_of","term_name":"peripheral B cell tolerance induction","termid":"GO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral B cell deletion","synonyms":[{"name":"peripheral B lymphocyte deletion","type":"exact"},{"name":"peripheral B-cell deletion","type":"exact"},{"name":"peripheral B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002454"}


id: GO:0001667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell migration that is accomplished by extension and retraction of a pseudopodium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ameboidal-type cell migration","synonyms":[{"name":"ameboid cell migration","type":"exact"},{"name":"amoeboid cell migration","type":"exact"},{"name":"amoeboidal cell migration","type":"exact"}],"termid":"GO:0001667"}


id: FYPO:0007397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell is abolished.","definition_xrefs":["GO:0140420","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished heme import","synonyms":[{"name":"abolished haem import","type":"exact"},{"name":"abolished heme import during mitotic cell cycle","type":"related"},{"name":"abolished heme import during vegetative growth","type":"exact"},{"name":"abolished heme import into cell","type":"exact"},{"name":"heme import abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0007397"}


id: PBO:0030602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_alpha-glucosidase_activity","termid":"PBO:0030602"}


id: GO:0006561
data:
  {"annotated_genes":["SJAG_00120","SJAG_03457","SJAG_00660","SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67521,64669,91208,78238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline metabolic process","termid":"GO:0006560"},{"relation_name":"is_a","term_name":"glutamine family amino acid biosynthetic process","termid":"GO:0009084"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00495":null,"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"proline biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"proline anabolism","type":"exact"},{"name":"proline biosynthesis","type":"exact"},{"name":"proline formation","type":"exact"},{"name":"proline synthesis","type":"exact"}],"termid":"GO:0006561","terms_by_termid":{"GO:0055129":null}}


id: PBO:0056805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter B, sphingolipid","termid":"PBO:0056805"}


id: MONDO:0008497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stormorken-Sjaastad-Langslet syndrome is characterized by thrombocytopathy, asplenia, miosis, muscle fatigue, migraine, dyslexia, and ichthyosis. It has been described in six members of one family. It is transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:3204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Stormorken syndrome","secondary_identifiers":["GARD:5188","UMLS:C1861451","DOID:0060354","ICD9:759.89","OMIM:185070","SCTID:711407000","MESH:C566108","MEDGEN:350028"],"synonyms":[{"name":"STRMK","type":"related"},{"name":"Stormorken syndrome","type":"exact"},{"name":"Stormorken-Sjaastad-Langslet syndrome","type":"related"},{"name":"Thrombocytopathy asplenia miosis","type":"related"},{"name":"Thrombocytopathy, asplenia, and miosis","type":"related"},{"name":"Thrombocytopathy-asplenia-miosis syndrome","type":"exact"},{"name":"thrombocytopathy, asplenia and miosis","type":"exact"},{"name":"york Platelet syndrome","type":"related"}],"termid":"MONDO:0008497","xrefs":{"Monarch":{"xref_id":"0008497"}}}


id: PBO:0002818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Sck2","termid":"PBO:0002818"}


id: FYPO:0003915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the mitochondrion is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"altered level of substance in mitochondrion","termid":"FYPO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitochondrial protein level","synonyms":[{"name":"decreased level of mitochondrial proteins","type":"exact"},{"name":"decreased mitochondrial protein level during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in mitochondrion during vegetative growth","type":"exact"},{"name":"reduced mitochondrial protein level","type":"exact"}],"termid":"FYPO:0003915"}


id: FYPO:0007134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling is normal (i.e. indistinguishable from wild type). SIN signaling is mediated by the small GTPase Ras, and results in the initiation of contraction of the contractile ring at the beginning of cytokinesis and cell division by septum formation.","definition_xrefs":["GO:0031028","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal septation initiation network signaling","synonyms":[{"name":"normal SIN signaling","type":"exact"},{"name":"normal SIN signalling","type":"exact"},{"name":"normal septation initiation network signaling during mitotic cell cycle","type":"related"},{"name":"normal septation initiation network signaling during vegetative growth","type":"exact"},{"name":"normal septation initiation network signalling","type":"exact"},{"name":"normal septation initiation signaling","type":"exact"}],"termid":"FYPO:0007134"}


id: GO:0090309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA methylation-dependent heterochromatin formation (obsolete GO:0090309)","synonyms":[{"name":"positive regulation of DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"positive regulation of methylation-dependent chromatin silencing","type":"broad"}],"termid":"GO:0090309"}


id: FYPO:0003838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction does not occur. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["GO:1902404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000032","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"abolished actomyosin contractile ring contraction","synonyms":[{"name":"abolished actomyosin contractile ring constriction","type":"exact"},{"name":"abolished actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"abolished actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"abolished cytokinesis with stable actinomyosin ring","type":"related"},{"name":"abolished cytokinetic contractile ring contraction","type":"exact"},{"name":"abolished mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"abolished mitotic contractile ring contraction","type":"exact"},{"name":"actomyosin contractile ring contraction abolished","type":"exact"}],"termid":"FYPO:0003838"}


id: MONDO:0001521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent episodes of serious assaultive acts or destruction of property due to a failure to resist aggressive impulses; the degree of aggression during these episodes is grossly out of proportion to any psychosocial provocation. The aggressive episodes are not etiologically linked to another mental disorder, a general medical condition, or substance use.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermittent explosive disorder","secondary_identifiers":["DOID:12401","NCIT:C94332","icd11.foundation:295017661","ICD10CM:F63.81","MEDGEN:7116","SCTID:231527003","ICD9:301.3","UMLS:C0021776","ICD9:312.34"],"synonyms":[{"name":"explosive personality disorder","type":"exact"}],"termid":"MONDO:0001521","xrefs":{"Monarch":{"xref_id":"0001521"}}}


id: MONDO:0800166
data:
  {"annotated_genes":["SJAG_02878","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87472,87473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"Knobloch syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1664056510","UMLS:C1849409","OMIMPS:267750","MEDGEN:336594"],"termid":"MONDO:0800166","terms_by_termid":{"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0800166"}}}


id: PBO:0064064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 98","termid":"PBO:0064064"}


id: GO:0100005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates ethanol catabolic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ethanol catabolic process by transcription from RNA polymerase II promoter (obsolete GO:0100005)","termid":"GO:0100005"}


id: PR:Q9UTQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01605","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C1071.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.09c","secondary_identifiers":["UniProtKB:Q9UTQ5"],"synonyms":[{"name":"Spom972h-DNAJC9","type":"exact"}],"termid":"PR:Q9UTQ5"}


id: FYPO:0002620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing trichostatin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on trichostatin A","synonyms":[{"name":"normal cell population growth in presence of trichostatin A","type":"exact"},{"name":"normal cell population growth on trichostatin A","type":"exact"},{"name":"normal cellular response to trichostatin A","type":"related"},{"name":"normal vegetative cell population growth on trichostatin A","type":"exact"}],"termid":"FYPO:0002620"}


id: PBO:0004268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic phosphate transporter (predicted)","termid":"PBO:0004268"}


id: MONDO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peripheral T-cell lymphoma (obsolete MONDO:0000434)","termid":"MONDO:0000434","xrefs":{"Monarch":{"xref_id":"0000434"}}}


id: GO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within the mucosal tissue of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","PMID:15609020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosal lymphocyte homeostasis","termid":"GO:0002261"}


id: SO:2000061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence referred to by an entry in a databank such as GenBank or SwissProt.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"databank_entry","synonyms":[{"name":"accession","type":"related"},{"name":"databank entry","type":"exact"}],"termid":"SO:2000061"}


id: PBO:0005849
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.11","termid":"PBO:0005849"}


id: PBO:0088554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidic acid transfer protein Ups2","termid":"PBO:0088554"}


id: PBO:0041357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4 binding protein alpha","termid":"PBO:0041357"}


id: PBO:0066041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1A, member of RAS oncogene family","termid":"PBO:0066041"}


id: PBO:0029239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin","termid":"PBO:0029239"}


id: MONDO:0800446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, isolated constitutional thrombocytopenia disease characterized by impaired platelet aggregation resulting from a defect in thromboxane synthesis or signaling, manifesting with mild to moderate mucocutaneous, gastrointestinal or surgical bleeding (e.g. easy bruising, prolonged epistaxis, excessive bleeding after a tooth extraction).","definition_xrefs":["Orphanet:220443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"bleeding diathesis due to thromboxane synthesis deficiency","secondary_identifiers":["UMLS:C5190857","MEDGEN:1678745","GARD:17132","icd11.foundation:1676860885"],"termid":"MONDO:0800446","xrefs":{"Monarch":{"xref_id":"0800446"}}}


id: PBO:0027402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_cellular_response_to_oxidative_stress","termid":"PBO:0027402"}


id: GO:0018245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O4' atom of peptidyl-tyrosine, O4'-glycosyl-L-tyrosine; the carbohydrate is glucose, the origin for glycogen.","definition_xrefs":["RESID:AA0157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked glycosylation via tyrosine","synonyms":[{"name":"protein amino acid O-linked glycosylation via tyrosine","type":"exact"}],"termid":"GO:0018245"}


id: MONDO:0019281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated genetic hair shaft abnormality (obsolete MONDO:0019281)","secondary_identifiers":["Orphanet:79366"],"synonyms":[{"name":"isolated hair shaft abnormality","type":"related"}],"termid":"MONDO:0019281","xrefs":{"Monarch":{"xref_id":"0019281"}}}


id: GO:0034538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-methylsalicylaldehyde + NAD+ = 3-methylsalicylate + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-methylsalicylaldehyde dehydrogenase activity (obsolete GO:0034538)","termid":"GO:0034538"}


id: PBO:0003396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gap1","termid":"PBO:0003396"}


id: PBO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-11-1 (pseudogene)","termid":"PBO:0051251"}


id: MONDO:0042961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"sacral hemangiomas multiple congenital abnormalities","secondary_identifiers":["MESH:C537222","MEDGEN:419414","GARD:317","UMLS:C2931443"],"termid":"MONDO:0042961","xrefs":{"Monarch":{"xref_id":"0042961"}}}


id: FYPO:0003283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of copper ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal copper import","synonyms":[{"name":"abnormal cellular copper import","type":"exact"},{"name":"abnormal copper cation import","type":"exact"},{"name":"abnormal copper import during mitotic cell cycle","type":"related"},{"name":"abnormal copper import during vegetative growth","type":"exact"},{"name":"abnormal copper import into cell","type":"exact"},{"name":"abnormal copper ion import","type":"exact"},{"name":"abnormal copper ion import across plasma membrane","type":"exact"}],"termid":"FYPO:0003283"}


id: GO:0010167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrate","termid":"GO:0010167"}


id: GO:1900762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of averantin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"averantin metabolic process","termid":"GO:1900761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"averantin catabolic process","synonyms":[{"name":"averantin breakdown","type":"exact"},{"name":"averantin catabolism","type":"exact"},{"name":"averantin degradation","type":"exact"}],"termid":"GO:1900762"}


id: GO:1900742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to pH.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to pH","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to pH","type":"narrow"}],"termid":"GO:1900742"}


id: GO:0002161
data:
  {"annotated_genes":["SJAG_01797","SJAG_00443","SJAG_03545","SJAG_04738","SJAG_01259","SJAG_01248","SJAG_02428","SJAG_04285","SJAG_02015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57048,57335,59138,63686,64277,67055,76189],"is_not":false,"summary":null,"term":"GO:0002161"},{"annotations":[106254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043907"},{"annotations":[73895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051500"}]},"cv_name":"molecular_function","definition":"The hydrolysis of an incorrectly aminoacylated tRNA.","definition_xrefs":["PMID:14663147","PMID:16087889","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00443":null,"SJAG_01248":null,"SJAG_01259":null,"SJAG_01797":null,"SJAG_02015":null,"SJAG_02428":null,"SJAG_03545":null,"SJAG_04285":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"aminoacyl-tRNA deacylase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino acid proofreading activity","type":"related"},{"name":"aminoacyl-tRNA hydrolysis activity","type":"related"}],"termid":"GO:0002161","terms_by_termid":{"GO:0002161":null,"GO:0043907":null,"GO:0051500":null}}


id: MONDO:0020464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Euryblepharon is a rare congenital eyelid anomaly of unknown etiology characterized by the bilateral horizontal enlargement of the palpebral fissure with vertically shortened eyelids, lateral canthus malpositioning and lateral ectropion. It may be isolated or associated with other ocular anomalies (e.g. strabismus or telecanthus) or systemic anomalies (e.g. blepharo-cheilo-odontic syndrome). In severe cases, it may result in lagophthalmos and exposure keratopathy, requiring surgical treatment.","definition_xrefs":["Orphanet:99172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital ectropion","termid":"MONDO:0020161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"euryblepharon","secondary_identifiers":["icd11.foundation:2086603843","SCTID:400954002","GARD:19674","MEDGEN:724511","UMLS:C1303001"],"termid":"MONDO:0020464","xrefs":{"Monarch":{"xref_id":"0020464"}}}


id: PBO:0030892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_oxidative_stress_during_vegetative_growth","termid":"PBO:0030892"}


id: PBO:0050921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 4","termid":"PBO:0050921"}


id: PBO:0053138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A","termid":"PBO:0053138"}


id: GO:0033298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a contractile vacuole. A specialized vacuole that fills with water from the cytoplasm and then discharges this externally by the opening of contractile vacuole pores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"},{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"contractile vacuole organization","synonyms":[{"name":"contractile vacuole organisation","type":"exact"},{"name":"contractile vacuole organization and biogenesis","type":"related"}],"termid":"GO:0033298"}


id: PR:Q8TFH6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eos1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFH6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein eos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.08","synonyms":[{"name":"Spom972h-eos1","type":"exact"}],"termid":"PR:Q8TFH6"}


id: PBO:0013048
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Break Localizing","termid":"PBO:0013048"}


id: PBO:0038492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 3","termid":"PBO:0038492"}


id: PBO:0087115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated protein; required for global translational elongation after recovery from stationary phase due to starvation; crosslinks to the 25S rRNA near the A site that overlaps the GTPase activation center, and to tRNAs; possible role in the iron deprivation response; localizes to the nucleus and cytoplasm, with enhanced nuclear localization under iron-replete conditions; null mutant exhibits slow growth during iron deprivation; orthologous to human CCDC124","termid":"PBO:0087115"}


id: GO:0106266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trihydroxyphenylhexan-1-one + chloride + FADH2 + O2 = (3-chloro-2,4,6-trihydroxyphenyl)hexan-1-one + FAD + H+ + 2 H2O.","definition_xrefs":["PMID:20231486","RHEA:64356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-chloro THPH synthase activity","termid":"GO:0106266"}


id: PBO:0051660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internexin neuronal intermediate filament protein alpha","termid":"PBO:0051660"}


id: PBO:0003893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase complex subunit (predicted)","termid":"PBO:0003893"}


id: MONDO:0005288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discrete abnormal tissue masses that protrude into the lumen of the intestine. A polyp is attached to the intestinal wall either by a stalk, pedunculus, or by a broad base.","definition_xrefs":["MESH:D007417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal polyp","secondary_identifiers":["EFO:0003855","ICD9:569.89","SCTID:254588001","HP:0005266","MEDGEN:9526","UMLS:C0021846"],"synonyms":[{"name":"intestinal polyp","type":"exact"},{"name":"intestinal polyp (disease)","type":"exact"}],"termid":"MONDO:0005288","xrefs":{"Monarch":{"xref_id":"0005288"}}}


id: MONDO:1011729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin M deficiency, non-human animal","secondary_identifiers":["OMIA:000556"],"termid":"MONDO:1011729","xrefs":{"Monarch":{"xref_id":"1011729"}}}


id: GO:0120028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of osmosensory signaling pathway.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of osmosensory signaling pathway (obsolete GO:0120028)","termid":"GO:0120028"}


id: MOD:00933
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - 5-hydro-5-methylimidazol-4-one, arginine methylglyoxal arginine adduct (+54 amu)","definition_xrefs":["Unimod:319#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C3-H2-O adduct (+54 amu) of malondialdehyde with lysine or methylglyoxal with arginine.","termid":"MOD:00630"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxal arginine adduct (+54 amu)","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:00933"}


id: GO:0097416
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic inclusion found in neurons. It consists of filaments and granular materials, exhibits a dense core with a rough peripheral halo and lacks a limiting membrane. The filaments of these inclusions are composed of approximately 15-25 nm granule-coated fibrils in association with normal 10-nm neurofilaments.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090105","PMID:18026741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body-like hyaline inclusion","synonyms":[{"name":"LBHI","type":"exact"}],"termid":"GO:0097416"}


id: PBO:0043045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHORDC1 pseudogene 1","termid":"PBO:0043045"}


id: GO:0005052
data:
  {"annotated_genes":["SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74134],"is_not":false,"summary":null,"term":"GO:0005052"}]},"cv_name":"molecular_function","definition":"Binding to a type 1 peroxisome targeting signal, a tripeptide with the consensus sequence (S/A/C)-(K/R/H)-L.","definition_xrefs":["GOC:mah","PMID:11687502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005048"],"is_obsolete":false,"name":"peroxisome matrix targeting signal-1 binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PEX5","type":"narrow"},{"name":"PTS1 binding","type":"exact"},{"name":"PTS1 receptor","type":"narrow"},{"name":"peroxisomal targeting signal 1 (PTS1) binding","type":"exact"},{"name":"peroxisome targeting signal-1 binding","type":"exact"},{"name":"peroxisome targeting signal-1 receptor","type":"narrow"}],"termid":"GO:0005052","terms_by_termid":{"GO:0005052":null}}


id: PBO:0061934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 6","termid":"PBO:0061934"}


id: PBO:0067285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 368, pseudogene","termid":"PBO:0067285"}


id: MONDO:0014330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eculizumab, poor response to (obsolete MONDO:0014330)","secondary_identifiers":["OMIM:615749"],"synonyms":[{"name":"eculizumab, poor response to","type":"exact"}],"termid":"MONDO:0014330","xrefs":{"Monarch":{"xref_id":"0014330"}}}


id: GO:0047993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymalonate + NAD+ = H+ + NADH + oxomalonate.","definition_xrefs":["EC:1.1.1.167","RHEA:11284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxymalonate dehydrogenase activity","secondary_identifiers":["MetaCyc:HYDROXYMALONATE-DEHYDROGENASE-RXN","KEGG_REACTION:R02969"],"synonyms":[{"name":"hydroxymalonate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047993"}


id: PBO:0036224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation_resulting_in_complete_rereplication,_with_mitotic_cell_cycle_arrest","termid":"PBO:0036224"}


id: GO:0014891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in striated muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle adaptation","termid":"GO:0014888"},{"relation_name":"is_a","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle atrophy","termid":"GO:0014891"}


id: GO:0031558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that directly activates any of the steps required for cell death by apoptosis as a result of a chemical stimulus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of apoptosis in response to chemical stimulus (obsolete GO:0031558)","synonyms":[{"name":"induction of apoptosis in response to chemical stimulus","type":"exact"},{"name":"induction of apoptosis in response to chemical substance","type":"exact"}],"termid":"GO:0031558"}


id: PBO:0081735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 667","termid":"PBO:0081735"}


id: PBO:0029190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_import","termid":"PBO:0029190"}


id: PBO:0078893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 4-2","termid":"PBO:0078893"}


id: PBO:0056715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menin 1","termid":"PBO:0056715"}


id: MONDO:0859521
data:
  {"annotated_genes":["SJAG_00666"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86902],"is_not":false,"summary":null,"term":"MONDO:0859521"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1840962","OMIM:620276","UMLS:C5830326"],"termid":"MONDO:0859521","terms_by_termid":{"MONDO:0859521":null},"xrefs":{"Monarch":{"xref_id":"0859521"}}}


id: PBO:0082383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 3 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit C10","termid":"PBO:0082383"}


id: GO:1900932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nonadec-1-ene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"nonadec-1-ene metabolic process","termid":"GO:1900876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nonadec-1-ene metabolic process","synonyms":[{"name":"regulation of nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900932"}


id: PBO:0058535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6080","termid":"PBO:0058535"}


id: MONDO:0800377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ACTH-independent Cushing syndrome","termid":"MONDO:0020529"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-independent adrenal Cushing syndrome, somatic","termid":"MONDO:0800377","xrefs":{"Monarch":{"xref_id":"0800377"}}}


id: PBO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex ubiquitin C-terminal hydrolase Ubp8","termid":"PBO:0000473"}


id: PBO:0061873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OOEP antisense RNA 1","termid":"PBO:0061873"}


id: PBO:0003354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 associated cyclin","termid":"PBO:0003354"}


id: PBO:0039812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 3","termid":"PBO:0039812"}


id: PBO:0091982
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective Meiosis and Sporulation","termid":"PBO:0091982"}


id: PBO:0113300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in axial bud site selection; prevents repolarization of cells at previous division sites; recruited with Nba1p to the cell cortex and to cytokinesis remnants (bud scars) by Aim44p and Nap1p where Nba1p prevents Rsr1p-mediated activation of Cdc24p, and therefore Cdc42p activation; acts with Nba1p to establish transient bud scar localization of Rga1p, a Cdc42p GAP; localizes to the nucleus and to cell division site during G2/M, and is then stably recruited to cytokinesis remnants","termid":"PBO:0113300"}


id: GO:0035794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane.","definition_xrefs":["GOC:bf","PMID:12546810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"is_a","term_name":"positive regulation of membrane permeability","termid":"GO:1905710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"positive regulation of mitochondrial membrane permeability","synonyms":[{"name":"MPT","type":"narrow"},{"name":"mitochondrial membrane permeability transition","type":"narrow"},{"name":"mitochondrial membrane permeabilization","type":"narrow"},{"name":"mitochondrial permeability transition","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane","type":"exact"}],"termid":"GO:0035794"}


id: MONDO:0005178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A noninflammatory degenerative joint disease occurring chiefly in older persons, characterized by degeneration of the articular cartilage, hypertrophy of bone at the margins and changes in the synovial membrane. It is accompanied by pain and stiffness, particularly after prolonged activity.","definition_xrefs":["NCIT:C3293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis","secondary_identifiers":["MESH:D010003","UMLS:C0029408","DOID:8398","ICD10CM:M15-M19","ICD10CM:M19","ICD9:715.3","icd11.foundation:558562409","MEDGEN:45244","HP:0002758","SCTID:396275006"],"synonyms":[{"name":"degenerative arthritis","type":"exact"},{"name":"degenerative joint disease","type":"exact"},{"name":"hypertrophic arthritis","type":"exact"},{"name":"osteoarthrosis","type":"exact"},{"name":"osteoarthrosis and allied disorder","type":"exact"}],"termid":"MONDO:0005178","xrefs":{"Monarch":{"xref_id":"0005178"}}}


id: PBO:0030069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_asparagine_import","termid":"PBO:0030069"}


id: PATO:0000494
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000494 period value (obsolete PATO:0000494)","termid":"PATO:0000494"}


id: MONDO:0001008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The abnormal narrowness of the palpebral fissure in the horizontal direction caused by the lateral displacement of the medial canthi of the eyelids. (Dorland, 27th ed)","definition_xrefs":["MESH:D016569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blepharophimosis","secondary_identifiers":["MEDGEN:2670","ICD9:374.46","HP:0000581","DOID:10348","UMLS:C0005744"],"synonyms":[{"name":"blepharophimosis","type":"exact"},{"name":"blepharophimosis (disease)","type":"exact"}],"termid":"MONDO:0001008","xrefs":{"Monarch":{"xref_id":"0001008"}}}


id: PBO:0083571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF NDC1/YML031W","termid":"PBO:0083571"}


id: PBO:0090192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER ubiquitin family protein","termid":"PBO:0090192"}


id: PBO:0052949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase suppressor of ras 1","termid":"PBO:0052949"}


id: MONDO:0019337
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"An autoimmune disease characterized by blisters on the skin.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune bullous skin disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:694.8","UMLS:C5681494","GARD:19028","Orphanet:79669","ICD9:694.9","DOID:8502","EFO:0008598","MEDGEN:1842418","SCTID:7231009"],"synonyms":[{"name":"bullous dermatosis","type":"related"},{"name":"bullous skin disease","type":"broad"}],"termid":"MONDO:0019337","terms_by_termid":{"MONDO:0008218":null},"xrefs":{"Monarch":{"xref_id":"0019337"}}}


id: GO:0001182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase I, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors.","definition_xrefs":["GOC:txnOH","PMID:18559419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter clearance during DNA-templated transcription","termid":"GO:0001109"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase I","termid":"GO:0006360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA polymerase I promoter clearance","secondary_identifiers":["GO:0001184"],"synonyms":[{"name":"RNA polymerase I promoter escape","type":"exact"},{"name":"promoter clearance from RNA polymerase I promoter","type":"exact"},{"name":"promoter clearance from RNA polymerase I promoter for nuclear large rRNA transcript","type":"related"}],"termid":"GO:0001182"}


id: PBO:0056296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 alpha","termid":"PBO:0056296"}


id: PBO:0113150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYF domain protein; involved in COPII vesicle formation; regulates Cdc48p function in transcription stress response; interacts with the Sec23p/Sec24p subcomplex; overexpression suppresses the temperature sensitivity of a myo2 mutant; homologous to human GIGYF1 and GIGYF2; similar to S. pombe Mpd2; SMY2 has a paralog, SYH1, that arose from the whole genome duplication","termid":"PBO:0113150"}


id: PBO:0057696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1285-1","termid":"PBO:0057696"}


id: PBO:0108992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase, N-terminal truncated compared to other tlh genes","termid":"PBO:0108992"}


id: GO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immature B cells from the bone marrow acquire the specialized features of T1 stage B cells in the spleen. T1 stage B cells do not express either CD23 or CD21.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitional stage B cell differentiation","termid":"GO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transitional one stage B cell differentiation","synonyms":[{"name":"T1 stage B cell differentiation","type":"exact"},{"name":"transitional one stage B cell development","type":"related"},{"name":"transitional one stage B lymphocyte differentiation","type":"exact"},{"name":"transitional one stage B-cell differentiation","type":"exact"},{"name":"transitional one stage B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002333"}


id: MONDO:0011582
data:
  {"annotated_genes":["SJAG_03222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85472],"is_not":false,"summary":null,"term":"MONDO:0011582"}]},"cv_name":"mondo","definition":"Any fatal multiple mitochondrial dysfunctions syndrome in which the cause of the disease is a mutation in the NFU1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03222":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:605711","Orphanet:401869","MEDGEN:478062","UMLS:C3276432","GARD:17661","DOID:0080133"],"synonyms":[{"name":"MMDS1","type":"related"},{"name":"Mmds","type":"broad"},{"name":"NFU1 deficiency","type":"exact"},{"name":"NFU1 fatal multiple mitochondrial dysfunctions syndrome","type":"exact"},{"name":"fatal multiple mitochondrial dysfunctions syndrome caused by mutation in NFU1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome type 1","type":"exact"}],"termid":"MONDO:0011582","terms_by_termid":{"MONDO:0011582":null},"xrefs":{"Monarch":{"xref_id":"0011582"}}}


id: PBO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Lsb6 (predicted)","termid":"PBO:0001119"}


id: PBO:0005631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein (predicted)","termid":"PBO:0005631"}


id: GO:0052062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by a symbiont of the production of phytoalexins as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host phytoalexin production (obsolete GO:0052062)","synonyms":[{"name":"activation by organism of host phytoalexin production","type":"exact"},{"name":"induction by organism of phytoalexin production in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052062"}


id: PBO:0069569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 841, pseudogene","termid":"PBO:0069569"}


id: GO:0071515
data:
  {"annotated_genes":["SJAG_03097","SJAG_02401","SJAG_00399","SJAG_03997","SJAG_00073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94404,103275,103545,108837],"is_not":false,"summary":null,"term":"GO:0071515"},{"annotations":[93681],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"A genomic imprinting process in which a stable single-strand DNA lesion triggers programmed gene conversion at the mating-type locus, thereby restricting mating-type interconversion to one of the two sister chromatids during DNA replication.","definition_xrefs":["PMID:18723894","GOC:mah","PMID:14765111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"part_of","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00399":null,"SJAG_02401":null,"SJAG_03097":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating-type locus imprinting","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"genetic imprinting at mating-type locus","type":"exact"},{"name":"genomic imprinting at mating-type locus","type":"exact"},{"name":"mating type determination, imprinting","type":"exact"}],"termid":"GO:0071515","terms_by_termid":{"GO:0071171":null,"GO:0071515":null}}


id: PBO:0087886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor and activator; involved in repression of flocculation-related genes, and activation of stress responsive genes; has direct role in INO1 transcriptional memory; negatively regulated by cAMP-dependent protein kinase A subunit Tpk2p; premature stop codon (C1430T, Q477-stop) in SK1 background is linked to the aggressively invasive phenotype of SK1 relative to BY4741 (S288C)","termid":"PBO:0087886"}


id: MONDO:0030044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudo-TORCH syndrome","termid":"MONDO:0009626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"pseudo-TORCH syndrome 3","secondary_identifiers":["MEDGEN:1708513","OMIM:618886","UMLS:C5394391"],"synonyms":[{"name":"PSEUDO-TORCH SYNDROME 3","type":"exact"},{"name":"PTORCH3","type":"exact"},{"name":"pseudo-torch syndrome 3","type":"exact"}],"termid":"MONDO:0030044","xrefs":{"Monarch":{"xref_id":"0030044"}}}


id: MONDO:0019812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tricuspid valve prolapse (obsolete MONDO:0019812)","termid":"MONDO:0019812","xrefs":{"Monarch":{"xref_id":"0019812"}}}


id: MONDO:0003885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm arising from the wall of the colon and rectum.","definition_xrefs":["NCIT:C5678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of large intestine","termid":"MONDO:0021444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colorectal lipoma","secondary_identifiers":["DOID:6460","MEDGEN:232382","UMLS:C1333114"],"synonyms":[{"name":"colorectal lipoma","type":"exact"},{"name":"large bowel lipoma","type":"exact"},{"name":"large intestine lipoma","type":"exact"},{"name":"lipoma of large bowel","type":"exact"},{"name":"lipoma of large intestine","type":"exact"},{"name":"lipoma of the large bowel","type":"exact"},{"name":"lipoma of the large intestine","type":"exact"}],"termid":"MONDO:0003885","xrefs":{"Monarch":{"xref_id":"0003885"}}}


id: MOD:01852
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-lysine residue to release hydrogen sulfide and form 2-amino-6-(2-amino-2-carboxyethylamino)hexanoic acid.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"L-lysinoalanine","termid":"MOD:01853"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-lysinoalanine (Lys-Cys)","synonyms":[{"name":"Lysinoalanine (from Cysteine)","type":"exact"}],"termid":"MOD:01852"}


id: GO:0031784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a melatonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"melatonin receptor binding","synonyms":[{"name":"melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031784"}


id: PBO:0113363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to the Rap1p C-terminus; inhibits MRX-dependent Tel1p activity by acting directly on Rad50p and discharging its activated ATP-bound state, thereby rendering the MRX complex incompetent for Tel1p activation; acts synergistically with Rif1p to help control telomere length, establish telomeric silencing; deletion results in telomere elongation; RIF2 has paralog ORC4 that arose from the whole genome duplication","termid":"PBO:0113363"}


id: MONDO:0013266
data:
  {"annotated_genes":["SJAG_00210","SJAG_02218"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86500,86501],"is_not":false,"summary":null,"term":"MONDO:0013266"}]},"cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the MEF2C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00210":null,"SJAG_02218":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 20","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:2013","OMIM:613443","Orphanet:664410","DOID:0070050","MEDGEN:462050","UMLS:C3150700"],"synonyms":[{"name":"MEF2C Deficiency","type":"exact"},{"name":"MEF2C autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD20","type":"exact"},{"name":"autosomal dominant intellectual disability 20","type":"related"},{"name":"autosomal dominant mental retardation 20","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in MEF2C","type":"exact"},{"name":"chromosome 5Q14.3 deletion syndrome, proximal","type":"related"},{"name":"chromosome 5q14.3 deletion syndrome","type":"exact"},{"name":"intellectual disability, autosomal dominant 20","type":"exact"},{"name":"intellectual disability, autosomal dominant type 20","type":"exact"},{"name":"intellectual disability, stereotypic movements, epilepsy, and/or cerebral malformations","type":"related"},{"name":"mental retardation, autosomal dominant 20","type":"exact"},{"name":"mental retardation, autosomal dominant type 20","type":"exact"},{"name":"mental retardation, stereotypic movements, epilepsy, and/or cerebral malformations","type":"related"},{"name":"neurodevelopmental disorder with hypotonia, stereotypic hand movements, and impaired language","type":"exact"}],"termid":"MONDO:0013266","terms_by_termid":{"MONDO:0013266":null},"xrefs":{"Monarch":{"xref_id":"0013266"}}}


id: MONDO:0006772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease VIII (obsolete MONDO:0006772)","termid":"MONDO:0006772","xrefs":{"Monarch":{"xref_id":"0006772"}}}


id: PBO:0027865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_acetylation","termid":"PBO:0027865"}


id: MONDO:0016397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal disease with epilepsy (obsolete MONDO:0016397)","secondary_identifiers":["Orphanet:225681"],"termid":"MONDO:0016397","xrefs":{"Monarch":{"xref_id":"0016397"}}}


id: GO:0007556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"part_of","term_name":"instar larval or pupal development","termid":"GO:0002165"},{"relation_name":"regulates","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of juvenile hormone metabolic process","synonyms":[{"name":"regulation of juvenile hormone metabolism","type":"exact"}],"termid":"GO:0007556"}


id: MONDO:0044318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"IDDGIP is an autosomal dominant syndromic neurodevelopmental disorder characterized by delayed psychomotor development, intellectual disability with speech delay, and behavioral abnormalities. Most patients have variable additional features, including feeding and gastrointestinal difficulties, high pain threshold and/or hypersensitivity to sound, and dysmorphic features, including mild facial abnormalities, strabismus, and small hands and feet (summary by {1:Jansen et al., 2017}).","definition_xrefs":["OMIM:617450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0700092"],"is_obsolete":false,"name":"intellectual developmental disorder with gastrointestinal difficulties and high pain threshold","secondary_identifiers":["Orphanet:653767","UMLS:C4479517","MEDGEN:1385744"],"synonyms":[{"name":"IDDGIP","type":"related"},{"name":"Jansen de Vries syndrome","type":"exact"},{"name":"intellectual developmental disorder with gastrointestinal difficulties and high pain threshold","type":"exact"}],"termid":"MONDO:0044318","xrefs":{"Monarch":{"xref_id":"0044318"}}}


id: MONDO:1011739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypotrichosis with thymic aplasia, non-human animal","secondary_identifiers":["OMIA:000544"],"termid":"MONDO:1011739","xrefs":{"Monarch":{"xref_id":"1011739"}}}


id: GO:0051498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate = 9alpha-copalyl diphosphate.","definition_xrefs":["MetaCyc:RXN-8528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"syn-copalyl diphosphate synthase activity","secondary_identifiers":["EC:5.5.1.14","RHEA:25524"],"synonyms":[{"name":"diterpene cyclase activity","type":"broad"}],"termid":"GO:0051498"}


id: PBO:0080161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge X-linked 3A","termid":"PBO:0080161"}


id: PBO:0047698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLYWCH-type zinc finger 1 pseudogene 1","termid":"PBO:0047698"}


id: PBO:0061606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleobindin 2","termid":"PBO:0061606"}


id: PBO:0080557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP2 N-terminal like","termid":"PBO:0080557"}


id: GO:0006526
data:
  {"annotated_genes":["SJAG_00695","SJAG_00412","SJAG_01019","SJAG_01592","SJAG_00392","SJAG_00636","SJAG_04577","SJAG_00635","SJAG_01461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106844,118718,112238,102943,70561,111409,110794,78802,98482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"glutamine family amino acid biosynthetic process","termid":"GO:0009084"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-arginine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"arginine anabolism","type":"exact"},{"name":"arginine biosynthesis","type":"exact"},{"name":"arginine formation","type":"exact"},{"name":"arginine synthesis","type":"exact"}],"termid":"GO:0006526","terms_by_termid":{"GO:0042450":null}}


id: MOD:01315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(2)H-labeled N6-succinyl-L-lysine.","definition_xrefs":["PubMed:12175151","Unimod:65#K","PubMed:11344537","PubMed:15189151","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"4x(2)H labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4H2), N-term & K","type":"related"},{"name":"Succinyl:2H(4)","type":"related"}],"termid":"MOD:01315"}


id: MONDO:0005379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of functional mental illness that manifests in distressed emotional reactions such as anxiety, obsessive thoughts, compulsive behaviors, or irrational fears.","definition_xrefs":["NCIT:C34848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotic disorder","secondary_identifiers":["MESH:D003866","NCIT:C35369","SCTID:111475002","ICD9:300.9","UMLS:C0027932","MESH:D000275","MESH:D009497","MEDGEN:10334","DOID:4964","SCTID:78667006","EFO:0004257","ICD10CM:F34.1","ICD9:300.89"],"synonyms":[{"name":"Psychoneuroses","type":"related"},{"name":"depressive neurosis","type":"narrow"},{"name":"disorder, neurotic","type":"related"},{"name":"disorders, neurotic","type":"related"},{"name":"neuroses","type":"related"},{"name":"neurosis","type":"exact"},{"name":"neurotic depression","type":"narrow"},{"name":"neurotic depression reactive type","type":"narrow"},{"name":"neurotic depressive state","type":"narrow"},{"name":"neurotic disorder","type":"exact"},{"name":"psychoneurosis","type":"exact"},{"name":"psychoneurosis NOS","type":"narrow"},{"name":"reactive depression","type":"narrow"}],"termid":"MONDO:0005379","xrefs":{"Monarch":{"xref_id":"0005379"}}}


id: PBO:0031571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_small_vegetative_cell","termid":"PBO:0031571"}


id: PBO:0071188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 29","termid":"PBO:0071188"}


id: GO:0141159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal acidification of host phagosomes. Mechanisms by which a symbiont prevents host phagosome acidification include the inhibitition of host V-ATPase, the proton pump that acidifies the phagosome, or disruption of the phagosome membrane by pore-forming toxin. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:20333253","PMID:22087003","PMID:33505976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host phagosome acidification","termid":"GO:0141159"}


id: GO:0044773
data:
  {"annotated_genes":["SJAG_00623","SJAG_01708","SJAG_03720","SJAG_00169","SJAG_00486","SJAG_02576","SJAG_02098","SJAG_03529","SJAG_04671","SJAG_00327","SJAG_03160","SJAG_01205","SJAG_00429","SJAG_04140","SJAG_04280","SJAG_04287","SJAG_00364","SJAG_01429","SJAG_02266","SJAG_03048","SJAG_01873","SJAG_01680","SJAG_01677","SJAG_01146","SJAG_01084","SJAG_03942","SJAG_04332","SJAG_05373","SJAG_02026","SJAG_00640","SJAG_03898","SJAG_02563","SJAG_03026","SJAG_02771","SJAG_01044","SJAG_01855","SJAG_01605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78328,80328,93890,111527,114797,116334,116561],"is_not":false,"summary":null,"term":"GO:0044773"},{"annotations":[91631,109994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[100864,109642,79741,106944,91755,92117,101373,112059,118040,90536,117347,89443,72773,75578,99681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[89444,90771,94864,101183,79139,89489,102679,74235,106945,112368,74758,112060,99682,96333,91756,79514,107984,116391,79746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signal transduction process involved in mitotic DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"},{"relation_name":"is_a","term_name":"mitotic DNA integrity checkpoint signaling","termid":"GO:0044774"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01044":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03529":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902402"],"synonyms":[{"name":"intracellular signal transduction pathway involved in mitotic DNA damage checkpoint","type":"narrow"},{"name":"intracellular signaling cascade involved in mitotic DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in mitotic DNA damage checkpoint","type":"related"},{"name":"mitotic DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic DNA damage checkpoint","type":"exact"}],"termid":"GO:0044773","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0044773":null}}


id: MONDO:0011221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weyers ulnar ray/oligodactyly syndrome","secondary_identifiers":["UMLS:C1865566","MEDGEN:356030","MESH:C536696","OMIM:602418"],"synonyms":[{"name":"Weyers ulnar ray/oligodactyly syndrome","type":"exact"}],"termid":"MONDO:0011221","xrefs":{"Monarch":{"xref_id":"0011221"}}}


id: PBO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, somatic","termid":"PBO:0044320"}


id: GO:0015377
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in).","definition_xrefs":["PMID:31747317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"},{"relation_name":"is_a","term_name":"monoatomic anion:monoatomic cation symporter activity","termid":"GO:0015296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chloride:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["TC:2.A.30"],"synonyms":[{"name":"cation:chloride cotransporter activity","type":"broad"},{"name":"cation:chloride symporter activity","type":"broad"}],"termid":"GO:0015377","terms_by_termid":{"GO:0015379":null}}


id: PR:O13791
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slt1 gene.","definition_xrefs":["UniProtKB:O13791","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein slt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.13","synonyms":[{"name":"Spom972h-slt1","type":"exact"}],"termid":"PR:O13791"}


id: GO:0150163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a microRNA (miRNA) that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:20737563","GOC:aruk","PMID:27145859"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated activation of transcription by RNA polymerase II (obsolete GO:0150163)","termid":"GO:0150163"}


id: PBO:0109375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 8","termid":"PBO:0109375"}


id: PBO:0050107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 17","termid":"PBO:0050107"}


id: GO:0007309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of an axis in the oocyte. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"oocyte construction","termid":"GO:0007308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte axis specification","secondary_identifiers":["GO:0048111"],"synonyms":[{"name":"oocyte axis determination","type":"related"}],"termid":"GO:0007309"}


id: PR:P08965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:9062192","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis protein mei2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.03c","secondary_identifiers":["PR:000027568","UniProtKB:P08965"],"synonyms":[{"name":"SPAC27D7.03C","type":"related"},{"name":"Spom972h-mei2","type":"exact"}],"termid":"PR:P08965"}


id: PATO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001081 physical measure value (obsolete PATO:0001081)","termid":"PATO:0001081"}


id: FYPO:0007245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the meiotic spindle pole bodies are normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal spindle pole body","termid":"FYPO:0005379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic spindle pole body","synonyms":[{"name":"normal meiotic SPB","type":"exact"},{"name":"normal spindle pole body during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007245"}


id: PBO:0080533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 4","termid":"PBO:0080533"}


id: PR:Q10276
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eki1 gene.","definition_xrefs":["PRO:DAN","UniProtKB:Q10276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.12c","synonyms":[{"name":"Spom972h-eki1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:Q10276"}


id: MONDO:0010982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis-intellectual disability syndrome with large keratohyalin granules in the skin","secondary_identifiers":["MESH:C563402","OMIM:601039","MEDGEN:318724","UMLS:C1832858"],"synonyms":[{"name":"ichthyosis-intellectual disability syndrome with large keratohyalin granules in the skin","type":"exact"},{"name":"ichthyosis-mental retardation syndrome with large keratohyalin granules in the skin","type":"related"}],"termid":"MONDO:0010982","xrefs":{"Monarch":{"xref_id":"0010982"}}}


id: PBO:0048141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 5","termid":"PBO:0048141"}


id: PBO:0071079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 81","termid":"PBO:0071079"}


id: PATO:0001469
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the abdomen of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved ventral","synonyms":[{"name":"curved anterior (human torso)","type":"exact"},{"name":"curved inferior (human head)","type":"exact"}],"termid":"PATO:0001469"}


id: PBO:0028844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_Mei2_nuclear_dot","termid":"PBO:0028844"}


id: PBO:0066153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB binding protein 6, ubiquitin ligase","termid":"PBO:0066153"}


id: GO:0042853
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68901],"is_not":false,"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:mah","GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine catabolic process","termid":"GO:0006524"},{"relation_name":"is_a","term_name":"pyruvate family amino acid catabolic process","termid":"GO:0009080"},{"relation_name":"is_a","term_name":"L-alanine metabolic process","termid":"GO:0042851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-alanine catabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"L-alanine breakdown","type":"exact"},{"name":"L-alanine catabolism","type":"exact"},{"name":"L-alanine degradation","type":"exact"}],"termid":"GO:0042853","terms_by_termid":{"GO:0042853":null}}


id: GO:1900680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferricrocin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ferricrocin biosynthetic process","termid":"GO:1900678"},{"relation_name":"is_a","term_name":"positive regulation of ferrichrome biosynthetic process","termid":"GO:1905570"},{"relation_name":"positively_regulates","term_name":"ferricrocin biosynthetic process","termid":"GO:0031171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferricrocin biosynthetic process","synonyms":[{"name":"activation of ferricrocin anabolism","type":"exact"},{"name":"activation of ferricrocin biosynthesis","type":"exact"},{"name":"activation of ferricrocin biosynthetic process","type":"narrow"},{"name":"activation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of ferricrocin formation","type":"exact"},{"name":"activation of ferricrocin synthesis","type":"exact"},{"name":"positive regulation of ferricrocin anabolism","type":"exact"},{"name":"positive regulation of ferricrocin biosynthesis","type":"exact"},{"name":"positive regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of ferricrocin formation","type":"exact"},{"name":"positive regulation of ferricrocin synthesis","type":"exact"},{"name":"up regulation of ferricrocin anabolism","type":"exact"},{"name":"up regulation of ferricrocin biosynthesis","type":"exact"},{"name":"up regulation of ferricrocin biosynthetic process","type":"exact"},{"name":"up regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of ferricrocin formation","type":"exact"},{"name":"up regulation of ferricrocin synthesis","type":"exact"},{"name":"up-regulation of ferricrocin anabolism","type":"exact"},{"name":"up-regulation of ferricrocin biosynthesis","type":"exact"},{"name":"up-regulation of ferricrocin biosynthetic process","type":"exact"},{"name":"up-regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of ferricrocin formation","type":"exact"},{"name":"up-regulation of ferricrocin synthesis","type":"exact"},{"name":"upregulation of ferricrocin anabolism","type":"exact"},{"name":"upregulation of ferricrocin biosynthesis","type":"exact"},{"name":"upregulation of ferricrocin biosynthetic process","type":"exact"},{"name":"upregulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of ferricrocin formation","type":"exact"},{"name":"upregulation of ferricrocin synthesis","type":"exact"}],"termid":"GO:1900680"}


id: PBO:0050459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox and leucine zipper encoding","termid":"PBO:0050459"}


id: GO:0009166
data:
  {"annotated_genes":["SJAG_00461","SJAG_02481","SJAG_06622","SJAG_04169","SJAG_03091","SJAG_02107","SJAG_03903","SJAG_03373","SJAG_02369","SJAG_06621","SJAG_02785","SJAG_00027","SJAG_04939","SJAG_04487","SJAG_04334","SJAG_04048","SJAG_00839","SJAG_02135","SJAG_04495","SJAG_03676","SJAG_03828","SJAG_01310","SJAG_05314","SJAG_03660","SJAG_00605","SJAG_04870","SJAG_02009","SJAG_02796","SJAG_04192","SJAG_00685","SJAG_02945"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[116707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[105781,106152,105782,78187,95341,103960,94848,106151,98317,109717,103704,109718,105783,109719,109715,109714,109713,109716,98588,116679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[79529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"},{"annotations":[79528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"},{"annotations":[117418,111778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"},{"annotations":[99310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[79787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[88928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[72552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[72555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[76354,73389],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70410],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[76802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04169":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04939":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide breakdown","type":"exact"},{"name":"nucleotide catabolism","type":"exact"},{"name":"nucleotide degradation","type":"exact"}],"termid":"GO:0009166","terms_by_termid":{"GO:0006110":null,"GO:0006198":null,"GO:0006256":null,"GO:0006742":null,"GO:0015964":null,"GO:0019677":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0061613":null,"GO:0061621":null,"GO:1901907":null,"GO:1901909":null,"GO:1901911":null}}


id: PBO:0075801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS18 like 2 pseudogene 2","termid":"PBO:0075801"}


id: PBO:0024837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf4 (predicted)","termid":"PBO:0024837"}


id: PBO:0053880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1159","termid":"PBO:0053880"}


id: GO:0106255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A hydroperoxy icosatetraenoate = a hydroxy epoxy icosatrienoate.","definition_xrefs":["RHEA:55560","PMID:12881489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"hydroperoxy icosatetraenoate isomerase activity","secondary_identifiers":["EC:5.4.4.7"],"termid":"GO:0106255"}


id: GO:0003790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete actin modulating activity (obsolete GO:0003790)","synonyms":[{"name":"actin modulating activity","type":"exact"}],"termid":"GO:0003790"}


id: PBO:0060442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleus accumbens associated 1","termid":"PBO:0060442"}


id: GO:0106020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140056","GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle docking","synonyms":[{"name":"regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106020"}


id: PBO:0061050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPAL4 divergent transcript","termid":"PBO:0061050"}


id: MONDO:0016035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that develops following bilateral adrenalectomy for Cushing syndrome. The signs and symptoms result from the presence of an adenocorticotropin-secreting pituitary gland adenoma, and include enlargement of the sella turcica and pressure on the adjacent structures, and skin hyperpigmentation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functioning pituitary gland adenoma","termid":"MONDO:0003429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nelson syndrome","secondary_identifiers":["GARD:7170","NCIT:C84917","Orphanet:199244","DOID:4968","MedDRA:10028913","MESH:D009347","icd11.foundation:1945677910","MEDGEN:342174","MESH:C531754","NORD:1492","SCTID:43019009","UMLS:C1852159"],"synonyms":[{"name":"Nelson's syndrome","type":"exact"},{"name":"Ridges-off-the-end syndrome","type":"related"},{"name":"dermal Ridges","type":"related"}],"termid":"MONDO:0016035","xrefs":{"Monarch":{"xref_id":"0016035"}}}


id: GO:0009062
data:
  {"annotated_genes":["SJAG_04570","SJAG_02763","SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71617],"is_not":false,"summary":null,"term":"GO:0009062"},{"annotations":[73592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[114092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_02763":null,"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fatty_acid_degradation","Reactome:R-HSA-390918"],"synonyms":[{"name":"fatty acid breakdown","type":"exact"},{"name":"fatty acid catabolism","type":"exact"},{"name":"fatty acid degradation","type":"exact"}],"termid":"GO:0009062","terms_by_termid":{"GO:0001561":null,"GO:0009062":null,"GO:0042758":null}}


id: PBO:0061954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 7","termid":"PBO:0061954"}


id: PBO:0077478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200A","termid":"PBO:0077478"}


id: PBO:0063086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 5","termid":"PBO:0063086"}


id: PBO:0078161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 38-2/delta variable 8","termid":"PBO:0078161"}


id: PBO:0090973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tat binding protein 1(TBP-1)-interacting protein (TBPIP) homolog","termid":"PBO:0090973"}


id: MONDO:0012251
data:
  {"annotated_genes":["SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85517],"is_not":false,"summary":null,"term":"MONDO:0012251"}]},"cv_name":"mondo","definition":"MEDNIK syndrome, previously known as Erythrokeratodermia Variabilis type 3 (EKV3), is characterized by intellectual deficit, enteropathy, sensorineural hearing loss, peripheral neuropathy, lamellar and erythrodermic ichthyosis, and keratodermia (MEDNIK stands for Mental retardation, Enteropathy, Deafness, peripheral Neuropathy, Ichtyosis, Keratodermia).","definition_xrefs":["Orphanet:171851"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of copper metabolism","termid":"MONDO:0017762"},{"relation_name":"is_a","term_name":"erythrokeratoderma","termid":"MONDO:0019270"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"MEDNIK syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17072","MEDGEN:322893","OMIM:609313","SCTID:722035007","MESH:C563739","UMLS:C1836330","DOID:0060483"],"synonyms":[{"name":"MEDNIK","type":"related"},{"name":"erythrokeratodermia variabilis 3","type":"exact"},{"name":"erythrokeratodermia variabilis, Kamouraska type","type":"exact"},{"name":"intellectual disability, enteropathy, deafness, neuropathy, ichthyosis, keratodermia","type":"exact"},{"name":"intellectual disability, enteropathy, deafness, peripheral neuropathy, ichthyosis, and keratoderma","type":"related"},{"name":"intellectual disability-enteropathy-deafness-peripheral neuropathy-ichthyosis-keratodermia syndrome","type":"exact"},{"name":"mental retardation, enteropathy, deafness, neuropathy, ichthyosis, keratodermia","type":"exact"},{"name":"mental retardation, enteropathy, deafness, peripheral neuropathy, ichthyosis, and keratoderma","type":"related"}],"termid":"MONDO:0012251","terms_by_termid":{"MONDO:0012251":null},"xrefs":{"Monarch":{"xref_id":"0012251"}}}


id: PBO:0057804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3126","termid":"PBO:0057804"}


id: PBO:0055142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2561","termid":"PBO:0055142"}


id: GO:0061502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances, in membrane-bounded vesicles, from the early sorting endosomes to the recycling endosomes.","definition_xrefs":["GOC:dph","GOC:kmv","PMID:21474295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport between endosomal compartments","termid":"GO:0098927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"early endosome to recycling endosome transport","termid":"GO:0061502"}


id: PBO:0066208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 1","termid":"PBO:0066208"}


id: PBO:0087110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal RNA processing element (RRPE)-binding protein; involved in the glucose-induced transition from quiescence to growth; restricted to nucleus in quiescent cells, released into cytoplasm after glucose repletion; binds Sin3p; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087110"}


id: MONDO:1011907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, non-human animal","secondary_identifiers":["OMIA:000710"],"termid":"MONDO:1011907","xrefs":{"Monarch":{"xref_id":"1011907"}}}


id: GO:0006894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of proteins from the Golgi to one of two types of secretory vesicle. Continuously secreted proteins are sorted into transport vesicles that fuse with the plasma membrane, releasing their contents by exocytosis. Specialized secretory cells have a second secretory pathway in which soluble proteins and other substances are initially stored in secretory vesicles for later release.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi to secretory vesicle transport (obsolete GO:0006894)","synonyms":[{"name":"Golgi to secretory vesicle transport","type":"exact"},{"name":"Golgi to secretory vesicle transport, vesicle-mediated","type":"exact"}],"termid":"GO:0006894"}


id: GO:0050684
data:
  {"annotated_genes":["SJAG_02058","SJAG_04782","SJAG_01511","SJAG_00996","SJAG_03279","SJAG_02018","SJAG_01040","SJAG_05231","SJAG_01919","SJAG_01799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76335],"is_not":false,"summary":null,"term":"GO:0050684"},{"annotations":[89798,118744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[111257,75671,92484,74413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[65209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000381"},{"annotations":[98890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905744"},{"annotations":[94068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA processing, those processes involved in the conversion of a primary mRNA transcript into a mature mRNA prior to its translation into polypeptide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01511":null,"SJAG_01799":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_03279":null,"SJAG_04782":null,"SJAG_05231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0050684","terms_by_termid":{"GO:0000381":null,"GO:0048024":null,"GO:0048026":null,"GO:0050684":null,"GO:1905744":null,"GO:1905746":null}}


id: PBO:0065427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1","termid":"PBO:0065427"}


id: FYPO:0006121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which membrane raft distribution, i.e. the process that establishes the spatial arrangement of membrane rafts within a cellular membrane, is abnormal.","definition_xrefs":["PomBase:mah","GO:0031580","PMID:19808887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal membrane raft distribution","synonyms":[{"name":"abnormal lipid raft distribution","type":"exact"},{"name":"abnormal membrane raft distribution during mitotic cell cycle","type":"related"},{"name":"abnormal membrane raft distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0006121"}


id: GO:0003194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the sinoatrial valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"sinoatrial valve morphogenesis","termid":"GO:0003185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial valve formation","synonyms":[{"name":"SA valve formation","type":"exact"}],"termid":"GO:0003194"}


id: PBO:0061058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase 1","termid":"PBO:0061058"}


id: MONDO:0005564
data:
  {"annotated_genes":["SJAG_04213","SJAG_00579","SJAG_05313","SJAG_04755","SJAG_01111","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007959"},{"annotations":[86675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"},{"annotations":[85513,85512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[87649,87650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"A usually malignant neoplasm composed of primitive (immature) tissues that resemble fetal tissues. Medulloblastoma, Ependymoblastoma, Pineoblastoma, and Wilms tumor are representative embryonal neoplasms. --2003","definition_xrefs":["NCIT:C3264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_01111":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"embryonal neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:45034","MESH:D009373","EFO:0005784","DOID:688","UMLS:C0027654","ONCOTREE:EMBT"],"synonyms":[{"name":"EMBT","type":"related"},{"name":"embryo neoplasm","type":"exact"},{"name":"embryonal cancer","type":"related"},{"name":"embryonal neoplasm","type":"exact"},{"name":"embryonal tumor","type":"exact"},{"name":"embryonal tumour","type":"exact"}],"termid":"MONDO:0005564","terms_by_termid":{"MONDO:0007959":null,"MONDO:0011014":null,"MONDO:0012252":null,"MONDO:0013224":null},"xrefs":{"Monarch":{"xref_id":"0005564"}}}


id: GO:1904242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["PMID:12771515","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"regulation of pancreatic trypsinogen release","type":"exact"}],"termid":"GO:1904242"}


id: PBO:0086942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RanGTP-binding protein; inhibits RanGAP1 (Rna1p)-mediated GTP hydrolysis of RanGTP (Gsp1p); shares similarity to proteins in other fungi but not in higher eukaryotes","termid":"PBO:0086942"}


id: PBO:0109166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 family protein, cenromeric isochromosome forming, Srr1","termid":"PBO:0109166"}


id: PBO:0039512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B like","termid":"PBO:0039512"}


id: PBO:0071593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 10","termid":"PBO:0071593"}


id: PBO:0085188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two mitochondrially-localized peptidyl-tRNA hydrolases; negatively regulates the ubiquitin-proteasome pathway via interactions with ubiquitin-like ubiquitin-associated proteins; dispensable for cell growth; see also PTH1","termid":"PBO:0085188"}


id: PBO:0062786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 1","termid":"PBO:0062786"}


id: MONDO:0008628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic and dysplastic dilation of the distal ureter within the bladder that may extend into the bladder neck and urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureteral disorder","termid":"MONDO:0001926"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureterocele","secondary_identifiers":["ICD9:593.89","MEDGEN:21778","icd11.foundation:408801251","MedDRA:10056433","MESH:D014518","OMIM:191650","SCTID:12818004","UMLS:C0041960","NCIT:C123159","NANDO:2200183","EFO:1001227","HP:0000070","DOID:4022"],"synonyms":[{"name":"ureterocele","type":"exact"},{"name":"ureterocele (disease)","type":"exact"}],"termid":"MONDO:0008628","xrefs":{"Monarch":{"xref_id":"0008628"}}}


id: PBO:0004215
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.2.2","termid":"PBO:0004215"}


id: PBO:0047516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculation and elongation protein zeta 1","termid":"PBO:0047516"}


id: SO:1000025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from adenine to thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_to_T_transversion","synonyms":[{"name":"A to T transversion","type":"exact"}],"termid":"SO:1000025"}


id: MONDO:0015217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A developmental defect of the eye that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","secondary_identifiers":["Orphanet:108985"],"synonyms":[{"name":"isolated developmental defect of the eye","type":"exact"},{"name":"nonsyndromic developmental defect of the eye","type":"exact"}],"termid":"MONDO:0015217","xrefs":{"Monarch":{"xref_id":"0015217"}}}


id: GO:1902066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell wall pectin metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:23453954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"cell wall pectin metabolic process","termid":"GO:0052546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cell wall pectin metabolic process","synonyms":[{"name":"regulation of cell wall pectin metabolism","type":"exact"},{"name":"regulation of cellulose and pectin-containing cell wall pectin metabolic process","type":"exact"},{"name":"regulation of pectin metabolism during cell wall biogenesis","type":"exact"},{"name":"regulation of plant-type cell wall pectin metabolic process","type":"exact"}],"termid":"GO:1902066"}


id: GO:1904113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of muscle filament sliding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:kmv","PMID:25717181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding","termid":"GO:0032971"},{"relation_name":"is_a","term_name":"negative regulation of muscle contraction","termid":"GO:0045932"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"muscle filament sliding","termid":"GO:0030049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle filament sliding","synonyms":[{"name":"down regulation of muscle filament sliding","type":"exact"},{"name":"down-regulation of muscle filament sliding","type":"exact"},{"name":"downregulation of muscle filament sliding","type":"exact"},{"name":"inhibition of muscle filament sliding","type":"narrow"}],"termid":"GO:1904113"}


id: GO:0015819
data:
  {"annotated_genes":["SJAG_04725","SJAG_03256","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104152,103121,110353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transport","termid":"GO:0015802"},{"relation_name":"is_a","term_name":"L-lysine transport","termid":"GO:1902022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lysine transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034226","GO:0061461"],"synonyms":[{"name":"L-lysine import","type":"narrow"},{"name":"L-lysine transport","type":"related"},{"name":"lysine import","type":"narrow"},{"name":"lysine uptake","type":"narrow"}],"termid":"GO:0015819","terms_by_termid":{"GO:0090517":null}}


id: PBO:0057706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1293","termid":"PBO:0057706"}


id: PR:Q9UT00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An extended synaptotagmin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PYUK71.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUK71.03c","secondary_identifiers":["UniProtKB:Q9UT00"],"synonyms":[{"name":"Spom972h-ESYT1","type":"exact"}],"termid":"PR:Q9UT00"}


id: PBO:0083514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF IST1/YNL265C","termid":"PBO:0083514"}


id: PBO:0016516
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MID1","termid":"PBO:0016516"}


id: FYPO:0006413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells). Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PomBase:mah","PMID:17452352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of histone gene mRNA during vegetative growth","synonyms":[{"name":"increased histone gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of histone gene RNA during vegetative growth","type":"exact"},{"name":"increased level of histone gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of histone gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0006413"}


id: PBO:0030504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_bortezomib","termid":"PBO:0030504"}


id: MOD:01436
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to cyclo[(prolylserin)-O-yl] cysteinate.","definition_xrefs":["PubMed:7961166","RESID:AA0489#CYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo[(prolylserin)-O-yl] cysteinate","termid":"MOD:01629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cyclo[(prolylserin)-O-yl] cysteinate (Cys)","synonyms":[{"name":"(3,6-dioxopyrrolo[4,5-a]piperazin-2-yl)methyl cysteinate","type":"exact"},{"name":"MOD_RES Cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"},{"name":"[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]methyl (2R)-2-amino-3-sulfanylpropanoate","type":"exact"},{"name":"cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"}],"termid":"MOD:01436"}


id: GO:1901738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vitamin A metabolic process.","definition_xrefs":["PMID:18093975","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"regulates","term_name":"vitamin A metabolic process","termid":"GO:0006776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of vitamin A metabolic process","synonyms":[{"name":"regulation of vitamin A metabolism","type":"exact"}],"termid":"GO:1901738"}


id: PBO:0071028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 30","termid":"PBO:0071028"}


id: PBO:0003979
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.19","termid":"PBO:0003979"}


id: PBO:0005363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG ortholog Alp14","termid":"PBO:0005363"}


id: PBO:0082137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activating gamma subunit of the AMP-activated Snf1p kinase complex; additional subunits of the complex are Snf1p and a Sip1p/Sip2p/Gal83p family member; activates glucose-repressed genes, represses glucose-induced genes; role in sporulation, and peroxisome biogenesis; protein abundance increases in response to DNA replication stress","termid":"PBO:0082137"}


id: PBO:0089367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Asr1","termid":"PBO:0089367"}


id: GO:0031379
data:
  {"annotated_genes":["SJAG_03193","SJAG_03356","SJAG_02725"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118307,70353,72266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031380"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses RNA-directed RNA polymerase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase complex","termid":"GO:0030880"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02725":null,"SJAG_03193":null,"SJAG_03356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031379","terms_by_termid":{"GO:0031380":null}}


id: GO:0075031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont germ tube hook structure formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"modulation of formation of symbiont germ tube hook structure for appressorium development","termid":"GO:0075030"},{"relation_name":"positively_regulates","term_name":"formation of appressorium germ tube hook structure","termid":"GO:0075029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of symbiont germ tube hook structure for appressorium development","synonyms":[{"name":"positive regulation of formation of symbiont germ tube hook structure on or near host","type":"exact"},{"name":"positive regulation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"positive regulation of symbiont germ tube hook structure formation on or near host","type":"related"}],"termid":"GO:0075031"}


id: GO:0106279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the UDP-N-acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0106278"},{"relation_name":"negatively_regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"negative regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"negative regulation of UDP-GlcNAc biosynthesis","type":"related"},{"name":"negative regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106279"}


id: PBO:0038743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 2","termid":"PBO:0038743"}


id: GO:0042186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"o-xylene metabolic process","termid":"GO:0018950"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"o-xylene catabolic process","synonyms":[{"name":"o-xylene breakdown","type":"exact"},{"name":"o-xylene catabolism","type":"exact"},{"name":"o-xylene degradation","type":"exact"},{"name":"ortho-xylene catabolic process","type":"exact"},{"name":"ortho-xylene catabolism","type":"exact"}],"termid":"GO:0042186"}


id: GO:0035946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading messenger RNA (mRNA) within the mitochondrion.","definition_xrefs":["PMID:19864255","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"},{"relation_name":"is_a","term_name":"mitochondrial RNA surveillance","termid":"GO:2000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA surveillance","synonyms":[{"name":"mitochondrial aberrant RNA catabolic process","type":"exact"},{"name":"mitochondrial mRNA quality control","type":"exact"},{"name":"mitochondrial messenger RNA surveillance","type":"exact"}],"termid":"GO:0035946"}


id: PBO:0041644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 S","termid":"PBO:0041644"}


id: PBO:0089298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Adg2","termid":"PBO:0089298"}


id: GO:0061871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatic stellate cell migration.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast migration","termid":"GO:0010764"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell migration","termid":"GO:0061869"},{"relation_name":"negatively_regulates","term_name":"hepatic stellate cell migration","termid":"GO:0061868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatic stellate cell migration","termid":"GO:0061871"}


id: GO:0060080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that causes a temporary decrease in postsynaptic membrane potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane potential","termid":"GO:0060078"},{"relation_name":"part_of","term_name":"chemical synaptic transmission, postsynaptic","termid":"GO:0099565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"inhibitory postsynaptic potential","synonyms":[{"name":"IPSP","type":"related"},{"name":"regulation of inhibitory post-synaptic membrane potential","type":"exact"}],"termid":"GO:0060080"}


id: GO:0052784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of reuteran, a soluble glucan polymer with mainly alpha-(1->4) glycosidic linkages and significant amounts of alpha-(1->6) and alpha-(1->4,6) glucosidic linkages.","definition_xrefs":["GOC:mengo_curators","PMID:15256553","PMID:16000808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"reuteran metabolic process","termid":"GO:0052783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"reuteran biosynthetic process","synonyms":[{"name":"reuteransucrase-mediated reuteran biosynthesis","type":"narrow"}],"termid":"GO:0052784"}


id: MONDO:0008157
data:
  {"annotated_genes":["SJAG_03449"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85670],"is_not":false,"summary":null,"term":"MONDO:0008157"}]},"cv_name":"mondo","definition":"Buschke-Ollendorff syndrome (BOS) is a benign disorder characterized by the association of osteopoikilosis lesions (``spotted bones'') in the skeleton and connective tissue nevi in the skin.","definition_xrefs":["Orphanet:1306"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteopetrosis","termid":"MONDO:0017198"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dermis elastic tissue disorder (obsolete MONDO:0019292)","termid":"MONDO:0019292"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":0,"is_obsolete":false,"name":"Buschke-Ollendorff syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1044","MEDGEN:120545","DOID:0111536","icd11.foundation:1556522143","MESH:C537415","OMIM:166700","UMLS:C0265514"],"synonyms":[{"name":"Bos","type":"related"},{"name":"Buschke Ollendorff syndrome","type":"related"},{"name":"Buschke-Ollendorff syndrome","type":"exact"},{"name":"Dermatoosteopoikilosis","type":"related"},{"name":"dermatofibrosis lenticularis disseminata with osteopoikilosis","type":"related"},{"name":"dermatofibrosis lenticularis disseminata, isolated","type":"related"},{"name":"dermatofibrosis, disseminated with osteopoikilosis","type":"related"},{"name":"dermatofibrosis, disseminated, with osteopoikilosis","type":"related"},{"name":"disseminated dermatofibrosis with osteopoikilosis","type":"exact"},{"name":"osteopathia condensans disseminata","type":"related"},{"name":"osteopoikilosis with melorheostosis","type":"related"},{"name":"osteopoikilosis with or without melorheostosis","type":"exact"},{"name":"osteopoikilosis, isolated","type":"related"}],"termid":"MONDO:0008157","terms_by_termid":{"MONDO:0008157":null},"xrefs":{"Monarch":{"xref_id":"0008157"}}}


id: GO:0004158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-dihydroorotate + O2 = H2O2 + orotate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroorotate oxidase activity (obsolete GO:0004158)","synonyms":[{"name":"(S)-dihydroorotate:oxygen oxidoreductase activity","type":"related"},{"name":"4,5-L-dihydroorotate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0004158"}


id: FYPO:0008196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3-KMe binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone binding","termid":"FYPO:0007835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9Me binding","termid":"FYPO:0008196"}


id: MONDO:0009214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations of the FANCD2 gene. This gene is involved in the repair of DNA double-strand breaks, both by homologous recombination and single-strand annealing.","definition_xrefs":["NCIT:C125706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0005570","MONDO:0002280","MONDO:0005046"],"is_obsolete":false,"name":"Fanconi anemia complementation group D2","secondary_identifiers":["UMLS:C3160738","GARD:15169","DOID:0111083","MEDGEN:463627","OMIM:227646"],"synonyms":[{"name":"FA4","type":"exact"},{"name":"FAD2","type":"exact"},{"name":"FANCD2","type":"exact"},{"name":"Fad2","type":"related"},{"name":"Fanconi Anemia, complementation group D","type":"related"},{"name":"Fanconi anemia complementation group D2","type":"exact"},{"name":"Fanconi anemia, complementation group D2","type":"related"},{"name":"Fanconi pancytopenia type 4","type":"exact"},{"name":"Fanconi pancytopenia, type 4","type":"related"}],"termid":"MONDO:0009214","xrefs":{"Monarch":{"xref_id":"0009214"}}}


id: PBO:0088084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing substrate adaptor for Cdc48p; ubiquitin regulatory X domain-containing protein that acts as a substrate recruiting cofactor for Cdc48p; positively regulates Glc7p PPase activity to promote growth and mitotic progression in complex with Cdc48p; ubiquitinated protein interactor involved in ER-associated degradation (ERAD); regulated by nuclear Ub-dependent degradation (INMAD pathway) independent of the Asi and Doa10 complexes; homolog of human p47 (NSFL1C)","termid":"PBO:0088084"}


id: MONDO:0054560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anauxetic dysplasia","termid":"MONDO:0011773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"anauxetic dysplasia 1","secondary_identifiers":["OMIM:607095","MEDGEN:1638106","DOID:0050640","UMLS:C4551965"],"synonyms":[{"name":"ANXD1","type":"related"},{"name":"anauxetic dysplasia","type":"related"},{"name":"anauxetic dysplasia 1","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, anauxetic type","type":"related"},{"name":"spondylometaepiphyseal dysplasia, Menger type","type":"related"},{"name":"spondylometaepiphyseal dysplasia, anauxetic type","type":"related"}],"termid":"MONDO:0054560","xrefs":{"Monarch":{"xref_id":"0054560"}}}


id: PBO:0047346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrosin","termid":"PBO:0047346"}


id: GO:0051301
data:
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_names":["part_of"],"summary":null,"term":"GO:1904498"},{"annotations":[78555],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031991"},{"annotations":[94134,119950],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[109538,117848,92169,101265,77378,107463,103811,90138,119025],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902412"},{"annotations":[101710,111705,88170],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[108273],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905391"},{"annotations":[116149],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"},{"annotations":[110964,95984,92485,102574,111786,102563,102573,115978,87764],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000920"}]},"cv_name":"biological_process","definition":"The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.","definition_xrefs":["GOC:go_curators","GOC:pr","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular 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id: MONDO:0003546
data:
  {"annotated_genes":["SJAG_04765","SJAG_02278","SJAG_04522","SJAG_01114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85699,85697,85698,85700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011444"}]},"cv_name":"mondo","definition":"A disease involving the oculomotor nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02278":null,"SJAG_04522":null,"SJAG_04765":null},"genotype_count":0,"is_obsolete":false,"name":"third cranial nerve disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:562","NCIT:C27598","MESH:D015840","SCTID:60750009","MEDGEN:78766","UMLS:C0271353"],"synonyms":[{"name":"disease of oculomotor nerve","type":"exact"},{"name":"disease or disorder of oculomotor nerve","type":"exact"},{"name":"disorder of oculomotor nerve","type":"exact"},{"name":"oculomotor nerve disease","type":"exact"},{"name":"oculomotor nerve disease or disorder","type":"exact"},{"name":"oculomotor nerve disorder","type":"exact"}],"termid":"MONDO:0003546","terms_by_termid":{"MONDO:0011444":null},"xrefs":{"Monarch":{"xref_id":"0003546"}}}


id: GO:0042919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"benzoate transport","termid":"GO:0042919"}


id: GO:0033560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydrofolate + NADP+ = folate + NADPH + H+.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"folate reductase activity","secondary_identifiers":["RHEA:31103","Reactome:R-HSA-9709098","Reactome:R-HSA-197972","Reactome:R-HSA-197963"],"termid":"GO:0033560"}


id: GO:0102384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 19-O-beta-glucopyranosyl-steviol + UDP-alpha-D-glucose = rubusoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 19-O-beta-glucopyranosyl-steviol glucosyltransferase activity (obsolete GO:0102384)","termid":"GO:0102384"}


id: GO:0090143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleoid. The nucleoid is the region of a bacterial cell, virion, mitochondrion or chloroplast to which the DNA is confined.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleoid organization","synonyms":[{"name":"nucleoid organisation","type":"exact"}],"termid":"GO:0090143"}


id: GO:0072467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that occurs in response to signals generated as a result of cell shape checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete response to cell shape checkpoint signaling (obsolete GO:0072467)","synonyms":[{"name":"cell shape checkpoint effector process","type":"exact"},{"name":"response to signal involved in cell shape checkpoint","type":"exact"}],"termid":"GO:0072467"}


id: GO:0160231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An actin-based cell projection extending laterally from the basolateral membrane of tuft cells in epithelial tissues, including the intestinal epithelium. These thin projections, typically 3-4 per cell and up to 3 micron long, directly contact the nuclei of adjacent epithelial cells, potentially facilitating intercellular communication and molecular exchange.","definition_xrefs":["PMID:37863104","PMID:28490731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytospinule","termid":"GO:0160231"}


id: MONDO:0010291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete androgen insensitivity syndrome due to coactivator deficiency (obsolete MONDO:0010291)","secondary_identifiers":["OMIM:300274"],"synonyms":[{"name":"androgen insensitivity syndrome due to coactivator deficiency","type":"related"}],"termid":"MONDO:0010291","xrefs":{"Monarch":{"xref_id":"0010291"}}}


id: PBO:0065096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 3","termid":"PBO:0065096"}


id: PBO:0086382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase of the DEAD-box family; involved in ribosomal biogenesis; required at post-transcriptional step for efficient retrotransposition; essential for growth under anaerobic conditions","termid":"PBO:0086382"}


id: PBO:0050183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1","termid":"PBO:0050183"}


id: MONDO:0020329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete classic Hodgkin lymphoma, lymphocyte-rich type (obsolete MONDO:0020329)","termid":"MONDO:0020329","xrefs":{"Monarch":{"xref_id":"0020329"}}}


id: PBO:0052654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 22","termid":"PBO:0052654"}


id: PBO:0016925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu32","termid":"PBO:0016925"}


id: PBO:0027285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_cellular_response_to_salt_stress","termid":"PBO:0027285"}


id: MONDO:0013736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myopathy, centronuclear, 3 (obsolete MONDO:0013736)","termid":"MONDO:0013736","xrefs":{"Monarch":{"xref_id":"0013736"}}}


id: GO:1905201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of gibberellin from one side of a membrane to the other.","definition_xrefs":["PMID:27139299","GO_REF:0000070","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"gibberellin transmembrane transporter activity","termid":"GO:1905201"}


id: PBO:0071498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 1","termid":"PBO:0071498"}


id: GO:0008705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5-methyl-5,6,7,8-tetrahydrofolate + L-homocysteine = (6S)-5,6,7,8-tetrahydrofolate + L-methionine.","definition_xrefs":["RHEA:11172","EC:2.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"5-methyltetrahydrofolate-dependent methyltransferase activity","termid":"GO:0042084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"methionine synthase activity","secondary_identifiers":["KEGG_REACTION:R00946","Reactome:R-HSA-174374","Reactome:R-HSA-3149539","MetaCyc:HOMOCYSMETB12-RXN"],"synonyms":[{"name":"5-methyltetrahydrofolate--homocysteine S-methyltransferase activity","type":"related"},{"name":"5-methyltetrahydrofolate--homocysteine transmethylase activity","type":"related"},{"name":"5-methyltetrahydrofolate-homocysteine S-methyltransferase activity","type":"exact"},{"name":"5-methyltetrahydrofolate:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"B12 N(5)-methyltetrahydrofolate homocysteine methyltransferase activity","type":"related"},{"name":"B12 N5-methyltetrahydrofolate homocysteine methyltransferase activity","type":"related"},{"name":"MetH","type":"related"},{"name":"N(5)-methyltetrahydrofolate methyltransferase activity","type":"related"},{"name":"N(5)-methyltetrahydrofolate--homocysteine cobalamin methyltransferase activity","type":"related"},{"name":"N(5)-methyltetrahydrofolic--homocysteine vitamin B12 transmethylase activity","type":"related"},{"name":"N-methyltetrahydrofolate:L-homocysteine methyltransferase activity","type":"related"},{"name":"N5-methyltetrahydrofolate methyltransferase activity","type":"related"},{"name":"N5-methyltetrahydrofolate-homocysteine cobalamin methyltransferase activity","type":"related"},{"name":"N5-methyltetrahydrofolic-homocysteine vitamin B12 transmethylase activity","type":"related"},{"name":"cobalamin-dependent methionine synthase activity","type":"related"},{"name":"methionine synthase (cobalamin-dependent) activity","type":"related"},{"name":"methyltetrahydrofolate--homocysteine vitamin B12 methyltransferase activity","type":"related"},{"name":"tetrahydrofolate methyltransferase activity","type":"related"},{"name":"tetrahydropteroylglutamate methyltransferase activity","type":"related"},{"name":"tetrahydropteroylglutamic methyltransferase activity","type":"related"},{"name":"vitamin B12 methyltransferase activity","type":"related"}],"termid":"GO:0008705"}


id: PBO:0054346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1739","termid":"PBO:0054346"}


id: PBO:0076257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1","termid":"PBO:0076257"}


id: GO:0072629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-28B due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:15546383","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-28B production","secondary_identifiers":["GO:0072630"],"synonyms":[{"name":"IL-28B production","type":"exact"},{"name":"IL28B production","type":"exact"},{"name":"interferon lambda 3 production","type":"exact"},{"name":"interleukin-28B secretion","type":"narrow"}],"termid":"GO:0072629"}


id: PBO:0069730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1011, pseudogene","termid":"PBO:0069730"}


id: MONDO:0003965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neuropsychiatric disorder whose primary feature is the delusion that relatives or close acquaintances are not the persons that they are known to be. Visual recognition appears intact but familiar persons are thought be imposters, that is, they appear similar or identical to known individuals but are not. Most cases are seen in the context of a psychotic state. However, if manifested post-traumatically, the cause is most likely due to neurologic impairment. This disorder should be contrasted with prosopagnosia, in which an individual may not recognize a familiar person at all.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"delusional disorder","termid":"MONDO:0004359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"Capgras syndrome","secondary_identifiers":["MEDGEN:2811","UMLS:C0006895","MESH:D002194","NCIT:C34446","DOID:6680"],"synonyms":[{"name":"Capgras delusion theory","type":"exact"}],"termid":"MONDO:0003965","xrefs":{"Monarch":{"xref_id":"0003965"}}}


id: PBO:0049987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 1 pseudogene 1","termid":"PBO:0049987"}


id: GO:0007120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of defining the next site of bud emergence adjacent to the last site of bud emergence on a budding cell.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud site selection","termid":"GO:0000282"},{"relation_name":"is_a","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0007163","GO:0008150"],"is_obsolete":false,"name":"axial cellular bud site selection","synonyms":[{"name":"axial bud site selection","type":"exact"},{"name":"axial budding","type":"broad"}],"termid":"GO:0007120"}


id: GO:0043561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation in response to osmotic stress","termid":"GO:0043561"}


id: PBO:0072721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribitol xylosyltransferase 1","termid":"PBO:0072721"}


id: GO:0140345
data:
  {"annotated_genes":["SJAG_01731","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94752,98255],"is_not":false,"summary":null,"term":"GO:0140345"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylcholine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:11870854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0003674","GO:0140303","GO:0005215"],"is_obsolete":false,"name":"phosphatidylcholine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"}],"termid":"GO:0140345","terms_by_termid":{"GO:0140345":null}}


id: PR:O74335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga5 gene.","definition_xrefs":["UniProtKB:O74335","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17F3.01c","synonyms":[{"name":"Spom972h-rga5","type":"exact"}],"termid":"PR:O74335"}


id: MONDO:0011516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early response to neural induction gene","secondary_identifiers":["MEDGEN:344332","OMIM:605105","UMLS:C1854633"],"synonyms":[{"name":"Erni","type":"related"},{"name":"early response to neural induction gene","type":"exact"}],"termid":"MONDO:0011516","xrefs":{"Monarch":{"xref_id":"0011516"}}}


id: PBO:0066941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 243","termid":"PBO:0066941"}


id: PBO:0034499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere_assembly","termid":"PBO:0034499"}


id: PBO:0069079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 326, pseudogene","termid":"PBO:0069079"}


id: PBO:0005757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCM-MHF complex subunit Mhf2","termid":"PBO:0005757"}


id: PATO:0001796
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coiling which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coiled","termid":"PATO:0000404"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased coiling","synonyms":[{"name":"low coiling","type":"exact"}],"termid":"PATO:0001796"}


id: PBO:0027933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0027933"}


id: MONDO:0024954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition produced in humans by the prolonged migration of animal nematode larvae in extraintestinal tissues other than skin; characterized by persistent hypereosinophilia, hepatomegaly, and frequently pneumonitis, commonly caused by Toxocara canis and Toxocara cati.","definition_xrefs":["MESH:D007816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxocariasis","termid":"MONDO:0005988"},{"relation_name":"is_a","term_name":"cutaneous larva migrans","termid":"MONDO:0018500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"larva migrans, visceral","secondary_identifiers":["UMLS:C0023049","MEDGEN:9681"],"synonyms":[{"name":"Migran, visceral larva","type":"related"},{"name":"larva Migran, visceral","type":"related"},{"name":"migrans, visceral larva","type":"related"},{"name":"visceral larva Migran","type":"related"},{"name":"visceral larva migrans","type":"related"},{"name":"visceral larva migrans syndrome","type":"related"}],"termid":"MONDO:0024954","xrefs":{"Monarch":{"xref_id":"0024954"}}}


id: GO:2000833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of steroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"positively_regulates","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"}


id: PBO:0086822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL011C is not an essential gene","termid":"PBO:0086822"}


id: GO:0018690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methoxybenzoate + AH(2) + O2 = 4-hydroxybenzoate + A + formaldehyde + H2O.","definition_xrefs":["EC:1.14.99.15","RHEA:18613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-methoxybenzoate monooxygenase (O-demethylating) activity","secondary_identifiers":["UM-BBD_reactionID:r0154","MetaCyc:1.14.99.15-RXN","KEGG_REACTION:R01306"],"synonyms":[{"name":"4-methoxybenzoate 4-monooxygenase (O-demethylating)","type":"related"},{"name":"4-methoxybenzoate O-demethylase activity","type":"related"},{"name":"4-methoxybenzoate monooxygenase activity","type":"exact"},{"name":"4-methoxybenzoate,hydrogen-donor:oxygen oxidoreductase (O-demethylating)","type":"related"},{"name":"p-anisic O-demethylase activity","type":"related"},{"name":"piperonylate-4-O-demethylase activity","type":"related"}],"termid":"GO:0018690"}


id: FYPO:0006019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which excess endoplasmic reticulum (ER) membrane forms stacks adjacent to the nucleus, known as karmellae.","definition_xrefs":["PMID:16607018","PomBase:mah","PMID:28242692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"},{"relation_name":"is_a","term_name":"excess endoplasmic reticulum membrane present","termid":"FYPO:0001784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002403","FYPO:0001320"],"is_obsolete":false,"name":"karmellae present","synonyms":[{"name":"karmellae formation","type":"related"}],"termid":"FYPO:0006019"}


id: GO:0050403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-zeatin + UDP-D-glucose = O-beta-D-glucosyl-trans-zeatin + H+ + UDP.","definition_xrefs":["RHEA:23224","EC:2.4.1.203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"trans-zeatin O-beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4723","KEGG_REACTION:R02118"],"synonyms":[{"name":"UDP-glucose:trans-zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:trans-zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-zeatin O-glucosyltransferase activity","type":"related"},{"name":"zeatin O-b-D-glucosyltransferase activity","type":"exact"},{"name":"zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"zeatin O-glucosyltransferase activity","type":"related"}],"termid":"GO:0050403"}


id: GO:0102348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: behenoyl-CoA + NADP = trans-2-docosenoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-docosan-2-enoyl-CoA reductase activity (obsolete GO:0102348)","termid":"GO:0102348"}


id: PBO:0068177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 484","termid":"PBO:0068177"}


id: GO:0050951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of temperature stimulus","synonyms":[{"name":"sensory perception of thermal stimulus","type":"exact"}],"termid":"GO:0050951"}


id: GO:0110107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of imaginal disc-derived wing vein specification.","definition_xrefs":["GOC:ha","PMID:11861482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"imaginal disc-derived wing vein specification","termid":"GO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc-derived wing vein specification","termid":"GO:0110107"}


id: PBO:0003594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 h3.2","termid":"PBO:0003594"}


id: FYECO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cycloheximide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cycloheximide","synonyms":[{"name":"+ CHX","type":"exact"}],"termid":"FYECO:0000257"}


id: SO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence directly repeated at both ends of a defined sequence, of the sort typically found in retroviruses.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long_terminal_repeat","secondary_identifiers":["http://en.wikipedia.org/wiki/Long_terminal_repeat"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:long_terminal_repeat","type":"exact"},{"name":"LTR","type":"exact"},{"name":"direct terminal repeat","type":"related"},{"name":"long terminal repeat","type":"exact"}],"termid":"SO:0000286"}


id: PBO:0074345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4","termid":"PBO:0074345"}


id: PBO:0052187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily M alpha 1","termid":"PBO:0052187"}


id: PBO:0055361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2790","termid":"PBO:0055361"}


id: GO:0006805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:cab2","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"part_of","term_name":"cellular response to xenobiotic stimulus","termid":"GO:0071466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xenobiotic metabolic process","secondary_identifiers":["Reactome:R-HSA-211981","GO:0017144","Reactome:R-HSA-211859","Reactome:R-HSA-2161541","Reactome:R-HSA-9748784","Wikipedia:Drug_metabolism","Wikipedia:Xenobiotic_metabolism"],"synonyms":[{"name":"drug metabolic process","type":"related"},{"name":"drug metabolism","type":"related"},{"name":"xenobiotic metabolism","type":"exact"}],"termid":"GO:0006805"}


id: GO:0003936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out).","definition_xrefs":["EC:3.6.3.14","TC:3.A.3.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-transporting two-sector ATPase activity (obsolete GO:0003936)","synonyms":[{"name":"hydrogen-transporting two-sector ATPase activity","type":"exact"},{"name":"proton-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0003936"}


id: MONDO:0021129
data:
  {"annotated_genes":["SJAG_03497","SJAG_04631","SJAG_03603","SJAG_03199","SJAG_03786","SJAG_04008","SJAG_00995","SJAG_04114","SJAG_04938","SJAG_02031","SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008955"},{"annotations":[86010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012553"},{"annotations":[85339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014696"},{"annotations":[86011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012554"},{"annotations":[85437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014050"},{"annotations":[86284,86283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024552"},{"annotations":[87002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013783"},{"annotations":[86282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010671"},{"annotations":[85966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014296"},{"annotations":[85582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010485"},{"annotations":[86913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010216"}]},"cv_name":"mondo","definition":"Congenital or developmental anomaly in which the eyeballs are abnormally small.","definition_xrefs":["MESH:D008850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_02031":null,"SJAG_02828":null,"SJAG_03199":null,"SJAG_03497":null,"SJAG_03603":null,"SJAG_03786":null,"SJAG_04008":null,"SJAG_04114":null,"SJAG_04631":null,"SJAG_04938":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:743.11","HP:0000568","DOID:10629","EFO:0005569","ICD9:743.1","NCIT:C98989","SCTID:204108000","UMLS:C0026010","ICD9:743.10","MEDGEN:10033"],"synonyms":[{"name":"microphthalmia","type":"exact"},{"name":"microphthalmos","type":"narrow"},{"name":"nanophthalmos","type":"narrow"},{"name":"simple microphthalmos","type":"exact"}],"termid":"MONDO:0021129","terms_by_termid":{"MONDO:0008955":null,"MONDO:0010216":null,"MONDO:0010485":null,"MONDO:0010671":null,"MONDO:0012553":null,"MONDO:0012554":null,"MONDO:0013783":null,"MONDO:0014050":null,"MONDO:0014296":null,"MONDO:0014696":null,"MONDO:0024552":null},"xrefs":{"Monarch":{"xref_id":"0021129"}}}


id: PBO:0068564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 15, pseudogene","termid":"PBO:0068564"}


id: GO:0042416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine biosynthetic process","termid":"GO:0042423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine biosynthetic process","synonyms":[{"name":"dopamine anabolism","type":"exact"},{"name":"dopamine biosynthesis","type":"exact"},{"name":"dopamine formation","type":"exact"},{"name":"dopamine synthesis","type":"exact"}],"termid":"GO:0042416"}


id: PBO:0051357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-10 (pseudogene)","termid":"PBO:0051357"}


id: GO:1904954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["PMID:22988876","GOC:PARL","GO_REF:0000060","GOC:TermGenie","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation (obsolete GO:1904954)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"}],"termid":"GO:1904954"}


id: PBO:0030152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_mercury","termid":"PBO:0030152"}


id: GO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"part_of","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell morphogenesis","termid":"GO:0001886"}


id: GO:0030689
data:
  {"annotated_genes":["SJAG_00311","SJAG_00838","SJAG_03654","SJAG_01494","SJAG_01275","SJAG_04346"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80471,73222,98202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030690"},{"annotations":[112766,73223,80472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030691"},{"annotations":[78980,73032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"Any of several heterodimers containing one or two Noc proteins, associated with preribosomal complexes; involved in ribosome biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_00838":null,"SJAG_01275":null,"SJAG_01494":null,"SJAG_03654":null,"SJAG_04346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Noc complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030689","terms_by_termid":{"GO:0030690":null,"GO:0030691":null,"GO:0030692":null}}


id: GO:0075104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont calcium or calmodulin-mediated signal transduction (obsolete GO:0075104)","synonyms":[{"name":"positive regulation by host of symbiont Ca++ or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075104"}


id: MONDO:0011453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulnar ray dysgenesis with postaxial polydactyly and renal cystic dysplasia","secondary_identifiers":["UMLS:C1858422","OMIM:604380","MESH:C565783","MEDGEN:346903"],"synonyms":[{"name":"ulnar ray dysgenesis with postaxial polydactyly and renal cystic dysplasia","type":"exact"}],"termid":"MONDO:0011453","xrefs":{"Monarch":{"xref_id":"0011453"}}}


id: PBO:0068738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 1","termid":"PBO:0068738"}


id: GO:0004583
data:
  {"annotated_genes":["SJAG_01950","SJAG_03656"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042283"},{"annotations":[77548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042281"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-glucosyl residue from dolichyl-phosphate D-glucose into a membrane lipid-linked oligosaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01950":null,"SJAG_03656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-446189","Reactome:R-HSA-4724291","Reactome:R-HSA-4724330","MetaCyc:RXN-5472","Reactome:R-HSA-446194","Reactome:R-HSA-446202"],"termid":"GO:0004583","terms_by_termid":{"GO:0042281":null,"GO:0042283":null}}


id: MONDO:0013593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the DIABLO gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 64","secondary_identifiers":["UMLS:C3279948","MEDGEN:481578","OMIM:614152","DOID:0110585","GARD:18134"],"synonyms":[{"name":"DFNA64","type":"narrow"},{"name":"DIABLO autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 64","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 64","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in DIABLO","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 64","type":"narrow"},{"name":"deafness, autosomal dominant 64","type":"narrow"},{"name":"deafness, autosomal dominant type 64","type":"narrow"}],"termid":"MONDO:0013593","xrefs":{"Monarch":{"xref_id":"0013593"}}}


id: PBO:0090857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proline transmembrane transporter Put4","termid":"PBO:0090857"}


id: PBO:0082373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor; required for oxidative stress tolerance; activated by H2O2 through the multistep formation of disulfide bonds and transit from the cytoplasm to the nucleus; Yap1p is degraded in the nucleus after the oxidative stress has passed; mediates resistance to cadmium; relative distribution to the nucleus increases upon DNA replication stress; YAP1 has a paralog, CAD1, that arose from the whole genome duplication","termid":"PBO:0082373"}


id: RO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquires_nutrients_from","termid":"RO:0002457"}


id: PBO:0071772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 5","termid":"PBO:0071772"}


id: MONDO:0020445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Agenesis of the superior vena cava (SVC) is a rare congenital anomaly of the great veins characterized by unilateral or bilateral complete absence of the SVC. Unilateral agenesis is mainly asymptomatic (most of the time diagnosed incidentally) and patients usually have otherwise normal heart structure. Bilateral agenesis, however, is frequently associated with other congenital cardiac anomalies and/or conduction abnormalities (such as tetralogy of Fallot, atrial septal defect) and typically present symptoms of SVC syndrome.","definition_xrefs":["Orphanet:99114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis of the superior vena cava","secondary_identifiers":["SCTID:204464007","MEDGEN:539590","GARD:19657","UMLS:C0265929","ICD9:747.49"],"synonyms":[{"name":"absence of the SVC","type":"exact"},{"name":"absence of the superior caval vein","type":"exact"},{"name":"absence of the superior vena cava","type":"exact"},{"name":"agenesis of the SVC","type":"exact"},{"name":"agenesis of the superior caval vein","type":"exact"}],"termid":"MONDO:0020445","xrefs":{"Monarch":{"xref_id":"0020445"}}}


id: PBO:0090756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3074 family protein, implicated in vesicle trafficking or lipid metabolism","termid":"PBO:0090756"}


id: PBO:0066759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 57","termid":"PBO:0066759"}


id: FYPO:0006958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2-oxoglutarate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 2-oxoglutarate level","synonyms":[{"name":"increased 2-oxoglutarate accumulation","type":"related"},{"name":"increased cellular 2-oxoglutarate level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2-oxoglutarate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006958"}


id: PBO:0005667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Spc19","termid":"PBO:0005667"}


id: PBO:0086741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; phosphorylated by Dbf2p-Mob1p in vitro; some strains contain microsatellite polymophisms at this locus; not an essential gene; YLR177W has a paralog, PSP1, that arose from the whole genome duplication","termid":"PBO:0086741"}


id: GO:0045747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway","termid":"GO:0008593"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"Notch signaling pathway","termid":"GO:0007219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Notch signaling pathway","synonyms":[{"name":"activation of Notch signaling pathway","type":"narrow"},{"name":"positive regulation of N signaling pathway","type":"exact"},{"name":"positive regulation of N signalling pathway","type":"exact"},{"name":"positive regulation of Notch signalling pathway","type":"exact"},{"name":"stimulation of Notch signaling pathway","type":"narrow"},{"name":"up regulation of Notch signaling pathway","type":"exact"},{"name":"up-regulation of Notch signaling pathway","type":"exact"},{"name":"upregulation of Notch signaling pathway","type":"exact"}],"termid":"GO:0045747"}


id: MONDO:0024883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor that has spread from its original (primary) site of growth to another site, close to or distant from the primary site. Metastasis is characteristic of advanced malignancies, but in rare instances can be seen in neoplasms lacking malignant morphology.","definition_xrefs":["NCIT:C3261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastatic neoplasm","secondary_identifiers":["MEDGEN:422476","UMLS:C2939420","EFO:0009709","ICDO:8000/6"],"synonyms":[{"name":"metastatic disease","type":"exact"},{"name":"metastatic neoplasm","type":"exact"},{"name":"metastatic tumor","type":"exact"},{"name":"metastatic tumour","type":"exact"}],"termid":"MONDO:0024883","xrefs":{"Monarch":{"xref_id":"0024883"}}}


id: PBO:0052852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-8","termid":"PBO:0052852"}


id: PBO:0086182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with ubiquinone biosynthetic enzymes; required for gluconeogenic gene activation","termid":"PBO:0086182"}


id: PR:Q92360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G9.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G9.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.15c","synonyms":[{"name":"Spom972h-SPAC6G9.15c","type":"exact"}],"termid":"PR:Q92360"}


id: PBO:0046856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 6","termid":"PBO:0046856"}


id: SO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the five-prime end of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_LTR","synonyms":[{"name":"5' LTR","type":"exact"},{"name":"5' long terminal repeat","type":"exact"},{"name":"five prime LTR","type":"exact"}],"termid":"SO:0000425"}


id: MONDO:0014509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitelliform macular dystrophy in which the cause of the disease is a mutation in the IMPG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult-onset foveomacular vitelliform dystrophy","termid":"MONDO:0011979"},{"relation_name":"is_a","term_name":"IMPG2-related dominant retinopathy","termid":"MONDO:0700242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitelliform macular dystrophy 5","secondary_identifiers":["MEDGEN:863780","OMIM:616152","UMLS:C4015343","GARD:16065"],"synonyms":[{"name":"IMPG2 vitelliform macular dystrophy","type":"exact"},{"name":"VMD5","type":"related"},{"name":"macular dystrophy, vitelliform, 5","type":"exact"},{"name":"macular dystrophy, vitelliform, type 5","type":"exact"},{"name":"vitelliform macular dystrophy caused by mutation in IMPG2","type":"exact"}],"termid":"MONDO:0014509","xrefs":{"Monarch":{"xref_id":"0014509"}}}


id: MONDO:0014164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the TMEM231 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 11","secondary_identifiers":["OMIM:615397","MEDGEN:815682","UMLS:C3809352","GARD:15957"],"synonyms":[{"name":"MKS11","type":"related"},{"name":"Meckel syndrome caused by mutation in TMEM231","type":"exact"},{"name":"Meckel syndrome, type 11","type":"exact"},{"name":"TMEM231 Meckel syndrome","type":"exact"},{"name":"meckel syndrome 11","type":"exact"}],"termid":"MONDO:0014164","xrefs":{"Monarch":{"xref_id":"0014164"}}}


id: MONDO:0030867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 7","secondary_identifiers":["GARD:18492","MEDGEN:1768257","UMLS:C5436874","OMIM:619130"],"synonyms":[{"name":"THC7","type":"exact"},{"name":"Thrombocytopenia, Autosomal Dominant, 7","type":"exact"},{"name":"thrombocytopenia 7","type":"exact"}],"termid":"MONDO:0030867","xrefs":{"Monarch":{"xref_id":"0030867"}}}


id: FYPO:0001719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lithium ions. Cells stop growing (and may die) at a concentration of lithium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to lithium","synonyms":[{"name":"hypersensitive to lithium","type":"exact"},{"name":"sensitive to lithium during mitotic cell cycle","type":"related"},{"name":"sensitive to lithium during vegetative growth","type":"exact"},{"name":"sensitive to lithium ions","type":"exact"}],"termid":"FYPO:0001719"}


id: PBO:0067039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 55, pseudogene","termid":"PBO:0067039"}


id: PBO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are2","termid":"PBO:0090487"}


id: GO:0019397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, via the intermediate 2-pyrone-4,6-dicarboxylate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic gallate catabolic process","termid":"GO:0042195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"gallate catabolic process via 2-pyrone-4,6-dicarboxylate","secondary_identifiers":["MetaCyc:GALLATE-DEGRADATION-I-PWY"],"synonyms":[{"name":"gallate breakdown via 2-pyrone-4,6-dicarboxylate","type":"exact"},{"name":"gallate degradation via 2-pyrone-4,6-dicarboxylate","type":"exact"},{"name":"gallic acid catabolic process via 2-pyrone-4,6-dicarboxylate","type":"exact"},{"name":"gallic acid catabolism via 2-pyrone-4,6-dicarboxylate","type":"exact"}],"termid":"GO:0019397"}


id: PBO:0051359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR22-4 (pseudogene)","termid":"PBO:0051359"}


id: MONDO:0013280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liposarcoma characterized by the presence of round non-lipogenic primitive mesenchymal cells and small signet ring lipoblasts within a myxoid stoma with a branching vascular pattern. This category includes hypercellular lesions with round cell morphology, formerly known as round cell liposarcoma.","definition_xrefs":["NCIT:C27781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid/round cell liposarcoma","termid":"MONDO:0020561"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxoid liposarcoma","secondary_identifiers":["DOID:5363","EFO:0000613","OMIM:613488","SCTID:404069006","DOID:5709","GARD:15667","UMLS:C0206634","ICD9:171.9","ICDO:8852/3","MEDGEN:104903","MESH:D018208"],"synonyms":[{"name":"Myxoliposarcoma","type":"related"},{"name":"mixed-type liposarcoma","type":"related"},{"name":"myxoid liposarcoma","type":"exact"},{"name":"myxoid liposarcoma (morphologic abnormality)","type":"exact"},{"name":"myxoid/round cell liposarcoma","type":"broad"}],"termid":"MONDO:0013280","xrefs":{"Monarch":{"xref_id":"0013280"}}}


id: PBO:0034521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomeric_DNA_separation","termid":"PBO:0034521"}


id: PBO:0075565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-1 proto-oncogene","termid":"PBO:0075565"}


id: PBO:0082221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha aminoadipate reductase; catalyzes the reduction of alpha-aminoadipate to alpha-aminoadipate 6-semialdehyde, which is the fifth step in biosynthesis of lysine; activation requires posttranslational phosphopantetheinylation by Lys5p","termid":"PBO:0082221"}


id: GO:0045025
data:
  {"annotated_genes":["SJAG_06586","SJAG_02991"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71047,114757],"is_not":false,"summary":null,"term":"GO:0045025"}]},"cv_name":"cellular_component","definition":"A mitochondrial protein complex with 3' to 5' exoribonuclease activity that participates in intron-independent turnover and processing of mitochondrial transcripts. In humans, the mitochondrial degradosome is a pentameric complex, and in yeast it exists as a heterodimer.","definition_xrefs":["PMID:9829834","PMID:10397341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02991":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitochondrial degradosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mtEXO","type":"exact"}],"termid":"GO:0045025","terms_by_termid":{"GO:0045025":null}}


id: GO:0009534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid","termid":"GO:0031976"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast thylakoid","termid":"GO:0009534"}


id: MONDO:0018146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, acquired, eye disease characterized by unilateral (rarely bilateral) abnormally dilated and tortuous capillaries around the fovea, associated with multiple arteriolar and venular aneurysms, lipid depositions, and intra-retinal cystoid degeneration. It leads to vision loss due to macular edema with hard exudates.","definition_xrefs":["Orphanet:353344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic macular telangiectasia type 1","secondary_identifiers":["MEDGEN:1653394","ICD10CM:H35.5","UMLS:C4751437","GARD:21531"],"synonyms":[{"name":"aneurysmal telangiectasia","type":"exact"},{"name":"visible and exudative idiopathic juxtafoveolar retinal telangiectasis","type":"exact"}],"termid":"MONDO:0018146","xrefs":{"Monarch":{"xref_id":"0018146"}}}


id: MONDO:0044763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diarrhea that results from decreased motility in the bowel; the resultant bowel stasis encourages bacterial overgrowth and subsequent bile salt deconjugation. Diarrhea is then the direct result of fat malabsorption and increased colonic secretion.","direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease secondary to altered bowel motility","termid":"MONDO:0000251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrheal disease secondary to decreased bowel motility","synonyms":[{"name":"diarrhea from decreased bowel motility","type":"exact"},{"name":"diarrhoea from decreased bowel motility","type":"exact"}],"termid":"MONDO:0044763","xrefs":{"Monarch":{"xref_id":"0044763"}}}


id: GO:0004667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = prostaglandin D(2).","definition_xrefs":["EC:5.3.99.2","RHEA:10600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"prostaglandin-D synthase activity","secondary_identifiers":["MetaCyc:PROSTAGLANDIN-D-SYNTHASE-RXN","KEGG_REACTION:R02266","Reactome:R-HSA-2161620","Reactome:R-HSA-2161701"],"synonyms":[{"name":"(5,13)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate D-isomerase activity","type":"related"},{"name":"PGD2 synthase activity","type":"related"},{"name":"PGH-PGD isomerase activity","type":"related"},{"name":"prostaglandin D2 synthase activity","type":"related"},{"name":"prostaglandin-H2 D-isomerase activity","type":"related"},{"name":"prostaglandin-R-prostaglandin D isomerase activity","type":"related"}],"termid":"GO:0004667"}


id: GO:0045735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Functions in the storage of nutritious substrates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"nutrient reservoir activity","synonyms":[{"name":"storage protein","type":"related"},{"name":"storage protein of fat body","type":"related"},{"name":"yolk protein","type":"related"}],"termid":"GO:0045735"}


id: MONDO:0011016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 14q24.3-q31.","definition_xrefs":["DOID:0110750","PMID:8617492","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 11","secondary_identifiers":["MEDGEN:321994","OMIM:601208","UMLS:C1832605","MESH:C563371"],"synonyms":[{"name":"IDDM11","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 11","type":"related"},{"name":"insulin-dependent diabetes mellitus 11","type":"exact"}],"termid":"MONDO:0011016","xrefs":{"Monarch":{"xref_id":"0011016"}}}


id: GO:0070787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the conidiophore over time, from its formation to the mature structure. The conidiophore is a specialized hypha that extends aerially from the growth substrate and bears conidia, or asexual spores.","definition_xrefs":["PMID:9529886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conidiophore development","termid":"GO:0070787"}


id: GO:1902872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of horizontal cell localization.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"horizontal cell localization","termid":"GO:0035852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of horizontal cell localization","synonyms":[{"name":"regulation of horizontal cell localisation","type":"exact"},{"name":"regulation of horizontal cell positioning","type":"exact"},{"name":"regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"regulation of retinal horizontal cell positioning","type":"exact"}],"termid":"GO:1902872"}


id: PBO:0044139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 5","termid":"PBO:0044139"}


id: MONDO:0016045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetragametic chimerism is a rare, sex chromosome disorder of sex development characterized by the two different haploid sets of maternal and paternal chromosomes and variable phenotype - from normal male or female genitalia, to different degrees of ambiguous genitalia, and often infertility. Also, in the cases of monochorionic dizygotic twins, it can be confined to blood of both twins.","definition_xrefs":["Orphanet:199310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism","secondary_identifiers":["UMLS:C0432480","MEDGEN:609542","GARD:20332"],"synonyms":[{"name":"46,XX/46,XY chimerism","type":"exact"}],"termid":"MONDO:0016045","xrefs":{"Monarch":{"xref_id":"0016045"}}}


id: PATO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in an bearer by virtue of the bearer's possessing only minor levels of ossification.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossified","termid":"PATO:0001448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poorly ossified","termid":"PATO:0002480"}


id: MONDO:0004412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare, aggressive carcinoma of the sweat glands arising from malignant transformation of a long standing spiradenoma. It usually grows in the upper extremities, lower extremities, trunk, and head and neck. It has the tendency to recur and metastasize most often to the lymph nodes, bones, and lungs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine carcinoma","termid":"MONDO:0024240"},{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"malignant spiradenoma","secondary_identifiers":["UMLS:C1266063","DOID:7960","MEDGEN:266097","NCIT:C5117","ICDO:8403/3","SCTID:403942003"],"synonyms":[{"name":"Spiradenocarcinoma","type":"exact"},{"name":"malignant eccrine spiradenoma","type":"exact"},{"name":"malignant eccrine spiradenoma (morphologic abnormality)","type":"exact"},{"name":"malignant spiradenoma","type":"exact"},{"name":"spiradenoma, malignant","type":"exact"}],"termid":"MONDO:0004412","xrefs":{"Monarch":{"xref_id":"0004412"}}}


id: PBO:0066150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 6","termid":"PBO:0066150"}


id: GO:0016872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The catalysis of certain rearrangements of a molecule to break or form a ring.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"intramolecular lyase activity","secondary_identifiers":["EC:5.5.1.-"],"termid":"GO:0016872"}


id: GO:0090372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:jh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of glycerol transport","termid":"GO:0090371"},{"relation_name":"positively_regulates","term_name":"glycerol transmembrane transport","termid":"GO:0015793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of glycerol transport","termid":"GO:0090372"}


id: GO:0045430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a chalcone = a flavanone.","definition_xrefs":["EC:5.5.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chalcone isomerase activity","secondary_identifiers":["MetaCyc:CHALCONE-ISOMERASE-RXN"],"synonyms":[{"name":"chalcone--flavonone isomerase activity","type":"related"},{"name":"chalcone-flavanone isomerase activity","type":"exact"},{"name":"flavanone lyase (decyclizing)","type":"related"}],"termid":"GO:0045430"}


id: PBO:0068505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 94, pseudogene","termid":"PBO:0068505"}


id: GO:0051486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate pathway that contributes to terpenoid biosynthesis. This pathway converts acetate, in the form of acetyl-CoA, to isopentenyl diphosphate (IPP) through a series of mevalonate intermediates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:0019287"},{"relation_name":"part_of","term_name":"terpenoid biosynthetic process, mevalonate-dependent","termid":"GO:0051485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway involved in terpenoid biosynthetic process","synonyms":[{"name":"isopentenyl diphosphate anabolism, mevalonate pathway, during terpenoid anabolism","type":"related"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway, during terpenoid biosynthetic process","type":"related"},{"name":"isopentenyl diphosphate formation, mevalonate pathway, during terpenoid biosynthesis","type":"related"},{"name":"isopentenyl diphosphate formation, mevalonate pathway, during terpenoid formation","type":"related"},{"name":"isopentenyl diphosphate synthesis, mevalonate pathway, during terpenoid synthesis","type":"related"}],"termid":"GO:0051486"}


id: PBO:0028635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cytochalasin_D","termid":"PBO:0028635"}


id: PBO:0051868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISL LIM homeobox 1","termid":"PBO:0051868"}


id: PBO:0110024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku70 (human XRCC6 ortholog) Pku70","termid":"PBO:0110024"}


id: PBO:0046838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 11","termid":"PBO:0046838"}


id: PBO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin family","termid":"PBO:0000736"}


id: PBO:0040707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 12 pseudogene 1","termid":"PBO:0040707"}


id: PBO:0067854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 156","termid":"PBO:0067854"}


id: PBO:0064895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B'alpha","termid":"PBO:0064895"}


id: PBO:0109405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR-106a-363 cluster host gene","termid":"PBO:0109405"}


id: MONDO:0000963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adipose tissue neoplasm of the esophagus. Clinical presentation includes obstruction, dysphagia, regurgitation, vomiting and reflux. It may be associated with aspiration and consecutive respiratory infections.","definition_xrefs":["NCIT:C5701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of esophagus","termid":"MONDO:0021459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal lipoma","secondary_identifiers":["MEDGEN:232162","UMLS:C1333455","DOID:10187"],"synonyms":[{"name":"esophageal lipoma","type":"exact"},{"name":"esophagus lipoma","type":"exact"},{"name":"lipoma of esophagus","type":"exact"},{"name":"lipoma of oesophagus","type":"exact"},{"name":"lipoma of the esophagus","type":"exact"},{"name":"lipoma of the oesophagus","type":"exact"},{"name":"oesophagus lipoma","type":"exact"}],"termid":"MONDO:0000963","xrefs":{"Monarch":{"xref_id":"0000963"}}}


id: PBO:0031414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G2/M_transition_delay","termid":"PBO:0031414"}


id: PR:P87111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00565","PANTHER:PTHR10617:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.04c","secondary_identifiers":["UniProtKB:P87111"],"synonyms":[{"name":"ETF dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ETF-QO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ETF-ubiquinone oxidoreductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ETFDH","type":"exact"},{"name":"electron-transferring-flavoprotein dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87111"}


id: PBO:0040597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG1 pseudogene 1","termid":"PBO:0040597"}


id: GO:0072572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to polymeric ADP-D-ribose, a polymer that is composed of poly-ADP-D-ribose units linked through 1,2-glycosidic bonds at the ribose ring.","definition_xrefs":["GOC:sart","PMID:20088964","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"poly-ADP-D-ribose binding","synonyms":[{"name":"pADPr binding","type":"exact"},{"name":"poly-ADP-ribose binding","type":"broad"}],"termid":"GO:0072572"}


id: GO:0003049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intrinsic circulatory process resulting from capillary fluid shift that modulates the force with which blood travels through the systemic arterial circulatory system. Capillary fluid shift is the movement of fluid across the capillary membrane between the blood and the interstitial fluid compartment.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by physical factors","termid":"GO:0003045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by capillary fluid shift","synonyms":[{"name":"blood pressure regulation by capillary fluid shift","type":"exact"}],"termid":"GO:0003049"}


id: GO:0090505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of one cell sheet over other cells involved in wound healing.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epiboly","termid":"GO:0090504"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epiboly involved in wound healing","termid":"GO:0090505"}


id: SO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region including the Transcription Start Site (TSS) of a gene and serving as a platform for Pre-Initiation Complex (PIC) assembly, enabling transcription of a gene under certain conditions.","direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic_promoter","synonyms":[{"name":"Eukaryotic promoter","type":"exact"}],"termid":"SO:0002221"}


id: PBO:0088546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR2-SEACAT complex ubiquitin-protein ligase E3 subunit Sea4","termid":"PBO:0088546"}


id: MONDO:0020559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"O'Sullivan McLeod syndrome is a benign lower motor neuron disorder and a rare variant of monomelic amyotrophy (MA), characterized by an initial unilateral weakness in the intrinsic hand muscles that eventually spreads to the opposite limb (with an asymmetrical distribution) and that has a very slow progression of muscular atrophy over a 20 year period.","definition_xrefs":["Orphanet:99965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomelic amyotrophy","termid":"MONDO:0011224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"O'Sullivan-McLeod syndrome","secondary_identifiers":["UMLS:C2721741","GARD:19718","MEDGEN:797656","MedDRA:10069682"],"termid":"MONDO:0020559","xrefs":{"Monarch":{"xref_id":"0020559"}}}


id: MONDO:0024982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections in animals with bacteria of the genus salmonella.","definition_xrefs":["MESH:D012481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease, non-human animal","termid":"MONDO:0700050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salmonella infections, animal","synonyms":[{"name":"Salmonella infection, animal","type":"related"},{"name":"animal Salmonella infection","type":"related"},{"name":"animal Salmonella infections","type":"related"},{"name":"infection, animal Salmonella","type":"related"},{"name":"infections, animal Salmonella","type":"related"},{"name":"salmonellosis, non-human animal","type":"exact"}],"termid":"MONDO:0024982","xrefs":{"Monarch":{"xref_id":"0024982"}}}


id: PBO:0002974
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K(m)=63 microM","termid":"PBO:0002974"}


id: PR:O14281
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8C9.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C8C9.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.12c","synonyms":[{"name":"Spom972h-SPAC8C9.12c","type":"exact"}],"termid":"PR:O14281"}


id: SO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The switch region of immunoglobulin heavy chains; it is involved in the rearrangement of heavy chain DNA leading to the expression of a different immunoglobulin classes from the same B-cell.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S_region","synonyms":[{"name":"INSDC_feature:S_region","type":"exact"},{"name":"S region","type":"exact"}],"termid":"SO:0001836"}


id: PR:P0CT78
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L11-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.10","synonyms":[{"name":"Spom972h-rpl1102","type":"exact"}],"termid":"PR:P0CT78"}


id: MOD:00365
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and a glycine residue by an isopeptide bond to form N-(L-isoglutamyl)-glycine.","definition_xrefs":["PubMed:14531691","RESID:AA0360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-isoglutamyl)-glycine","synonyms":[{"name":"(S)-2-amino-5-(carboxymethyl)amino-5-oxopentanoic acid","type":"exact"},{"name":"2-amino-N5-(carboxymethyl)-pentanediamic acid","type":"exact"},{"name":"CROSSLNK Isoglutamyl glycine isopeptide (Gly-Glu)","type":"exact"},{"name":"N-(L-isoglutamyl)-glycine","type":"exact"},{"name":"N-gamma-glutamylglycine","type":"exact"},{"name":"isoglutamyl glycine","type":"exact"}],"termid":"MOD:00365"}


id: PBO:0018131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase Gud1 (predicted)","termid":"PBO:0018131"}


id: PBO:0030550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histidine_import","termid":"PBO:0030550"}


id: PBO:0039340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alsin Rho guanine nucleotide exchange factor ALS2","termid":"PBO:0039340"}


id: PBO:0090919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N7-)-methyltransferase WD repeat subunit Trm82","termid":"PBO:0090919"}


id: FYPO:0007918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA 3' end processing is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}


id: MONDO:0019007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal atresia","secondary_identifiers":["UMLS:C1321884","HP:0000148","MedDRA:10046879","Orphanet:65681","MEDGEN:232948","icd11.foundation:1126562070","GARD:18867"],"termid":"MONDO:0019007","xrefs":{"Monarch":{"xref_id":"0019007"}}}


id: PBO:0072485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 14","termid":"PBO:0072485"}


id: GO:0051493
data:
  {"annotated_genes":["SJAG_02045","SJAG_04666","SJAG_04464","SJAG_03486","SJAG_03581","SJAG_01774","SJAG_00333","SJAG_05000","SJAG_04597","SJAG_02795","SJAG_00661","SJAG_00244","SJAG_00514","SJAG_02392","SJAG_00521","SJAG_01805","SJAG_03455","SJAG_04479","SJAG_00082","SJAG_02592","SJAG_04312","SJAG_01993","SJAG_04776","SJAG_00424","SJAG_03048","SJAG_03936","SJAG_02700","SJAG_03655","SJAG_02366","SJAG_03631","SJAG_03086","SJAG_02566","SJAG_02684","SJAG_00610","SJAG_00845","SJAG_01320","SJAG_01894","SJAG_00279","SJAG_02332","SJAG_01826","SJAG_04522","SJAG_01821","SJAG_03637","SJAG_04100","SJAG_04461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79498,80529,76036,92648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[74771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[98598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[102686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[102170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[94734,90322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[113694,87849,110851,94735,94904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[111765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[110431,71835,115649,78226,96178,103164,99767,116815,79260,74405,78063,73685,73711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032956"},{"annotations":[107932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[67293,77618,79757,68420,76947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[104022,91465,100506,113379,105686,115650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070507"},{"annotations":[70962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031110"},{"annotations":[94134,119950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[71891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[115382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[90196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00279":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00514":null,"SJAG_00521":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01320":null,"SJAG_01774":null,"SJAG_01805":null,"SJAG_01821":null,"SJAG_01826":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02045":null,"SJAG_02332":null,"SJAG_02366":null,"SJAG_02392":null,"SJAG_02566":null,"SJAG_02592":null,"SJAG_02684":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03637":null,"SJAG_03655":null,"SJAG_03936":null,"SJAG_04100":null,"SJAG_04312":null,"SJAG_04461":null,"SJAG_04464":null,"SJAG_04479":null,"SJAG_04522":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of cytoskeleton organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32915139":null},"synonyms":[{"name":"regulation of cytoskeleton organisation","type":"exact"},{"name":"regulation of cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0051493","terms_by_termid":{"GO:0030833":null,"GO:0031110":null,"GO:0031117":null,"GO:0032231":null,"GO:0032956":null,"GO:0034316":null,"GO:0051016":null,"GO:0060236":null,"GO:0070507":null,"GO:0110161":null,"GO:0110162":null,"GO:0120306":null,"GO:1901673":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: PBO:0047738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 3A","termid":"PBO:0047738"}


id: FYPO:0004058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination at a CRE promoter in a chromosome is decreased.","definition_xrefs":["PomBase:mah","PMID:19436749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased meiotic recombination at CRE promoter","synonyms":[{"name":"decreased meiotic recombination at M26 site","type":"exact"},{"name":"reduced meiotic recombination at CRE promoter","type":"exact"}],"termid":"FYPO:0004058"}


id: GO:0075094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein beta subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction mediated by G-protein beta subunit (obsolete GO:0075094)","termid":"GO:0075094"}


id: MONDO:0009644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency","termid":"MONDO:0020480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency type B","secondary_identifiers":["UMLS:C1854989","GARD:17387","MESH:C565373","MEDGEN:340760","OMIM:252160","Orphanet:308393","DOID:0111163","PMID:10053004"],"synonyms":[{"name":"MOCOD type B","type":"exact"},{"name":"MOCODB","type":"exact"},{"name":"combined deficiency of sulfite oxidase, xanthine dehydrogenase and aldehyde oxidase type B","type":"exact"},{"name":"molybdenum cofactor deficiency B","type":"exact"},{"name":"molybdenum cofactor deficiency complementation group B","type":"exact"},{"name":"molybdenum cofactor deficiency type B","type":"related"},{"name":"molybdenum cofactor deficiency, complementation group B","type":"related"},{"name":"molybdenum cofactor deficiency, complementation group type B","type":"exact"},{"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency type B","type":"exact"}],"termid":"MONDO:0009644","xrefs":{"Monarch":{"xref_id":"0009644"}}}


id: PBO:0075015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-26","termid":"PBO:0075015"}


id: PBO:0067792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 94","termid":"PBO:0067792"}


id: GO:0150074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["PMID:26670206","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein-glutamine gamma-glutamyltransferase activity","termid":"GO:0150074"}


id: PR:O42839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13260:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.01c","secondary_identifiers":["UniProtKB:O42839"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC19G12.01c","type":"related"},{"name":"Spom972h-ANAPC4","type":"exact"},{"name":"apc4","type":"related"},{"name":"cell untimely torn protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lid1","type":"related"}],"termid":"PR:O42839"}


id: PBO:0058468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5197","termid":"PBO:0058468"}


id: GO:0006925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an inflammatory cell, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory cell apoptotic process","secondary_identifiers":["Reactome:R-HSA-168277"],"synonyms":[{"name":"apoptosis of inflammatory cells","type":"exact"},{"name":"inflammatory cell apoptosis","type":"narrow"},{"name":"inflammatory cell programmed cell death by apoptosis","type":"exact"},{"name":"killing of inflammatory cells","type":"exact"},{"name":"programmed cell death of inflammatory cells by apoptosis","type":"exact"},{"name":"programmed cell death, inflammatory cells","type":"exact"}],"termid":"GO:0006925"}


id: GO:0044633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of complement activation, via the alternative pathway, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation, alternative pathway in another organism (obsolete GO:0044633)","synonyms":[{"name":"modulation of complement activation, alternative pathway in other organism","type":"exact"},{"name":"regulation of complement activation, alternative pathway in other organism","type":"related"}],"termid":"GO:0044633"}


id: GO:0160173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of histamine from one side of a membrane to the other.","definition_xrefs":["PMID:36288320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"histamine transmembrane transporter activity","termid":"GO:0160173"}


id: PBO:0063685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 5","termid":"PBO:0063685"}


id: PBO:0064938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic polypeptide 2, pseudogene","termid":"PBO:0064938"}


id: PBO:0044388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily AC member 1, pseudogene","termid":"PBO:0044388"}


id: GO:0050740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine.","definition_xrefs":["RESID:AA0349"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine (obsolete GO:0050740)","termid":"GO:0050740"}


id: MONDO:0013987
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87357],"is_not":false,"summary":null,"term":"MONDO:0013987"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 15 is a rare mitochondrial disease due to a defect in mitochondrial protein synthesis characterized by onset in infancy or early childhood of muscular hypotonia, gait ataxia, mild bilateral pyramidal tract signs, developmental delay (affecting mostly speech and coordination) and subsequent intellectual disability. Short stature, obesity, microcephaly, strabismus, nystagmus, reduced visual acuity, lactic acidosis, and a brain neuropathology consistent with Leigh syndrome are also reported.","definition_xrefs":["Orphanet:319524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111491","MEDGEN:1646555","GARD:17456","OMIM:614947","SCTID:763203009","UMLS:C4706313"],"synonyms":[{"name":"COXPD15","type":"exact"},{"name":"MTFMT combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation defect type 15","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 15","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MTFMT","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 15","type":"exact"}],"termid":"MONDO:0013987","terms_by_termid":{"MONDO:0013987":null},"xrefs":{"Monarch":{"xref_id":"0013987"}}}


id: PBO:0027470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_NAD(P)H_oxidase_activity","termid":"PBO:0027470"}


id: MONDO:0100259
data:
  {"annotated_genes":["SJAG_02619"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008953"},{"annotations":[87511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011101"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02619":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0006025","MONDO:0005244","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX1 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX1 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX1 defect","type":"exact"}],"termid":"MONDO:0100259","terms_by_termid":{"MONDO:0008953":null,"MONDO:0011101":null},"xrefs":{"Monarch":{"xref_id":"0100259"}}}


id: GO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor recycling","termid":"GO:0001919"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"positively_regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor recycling","synonyms":[{"name":"activation of receptor recycling","type":"narrow"},{"name":"stimulation of receptor recycling","type":"narrow"},{"name":"up regulation of receptor recycling","type":"exact"},{"name":"up-regulation of receptor recycling","type":"exact"},{"name":"upregulation of receptor recycling","type":"exact"}],"termid":"GO:0001921"}


id: PR:O13787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec62 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation protein sec62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.09","synonyms":[{"name":"Spom972h-sec62","type":"exact"}],"termid":"PR:O13787"}


id: MONDO:0000878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the retina by cytomegalovirus characterized by retinal necrosis, hemorrhage, vessel sheathing, and retinal edema. Cytomegalovirus retinitis is a major opportunistic infection in aids patients and can cause blindness.","definition_xrefs":["MESH:D017726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis","termid":"MONDO:0002708"},{"relation_name":"is_a","term_name":"cytomegalovirus infection","termid":"MONDO:0005132"},{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"},{"relation_name":"is_a","term_name":"viral eye infection","termid":"MONDO:0020950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cytomegalovirus retinitis","secondary_identifiers":["MEDGEN:61532","SCTID:22455005","UMLS:C0206178","DOID:0080160","GARD:9531","EFO:1001302","NCIT:C50521"],"synonyms":[{"name":"CMV retinitis","type":"exact"},{"name":"Cytomegaloviral Retinitis","type":"exact"},{"name":"Cytomegalovirus caused retinitis","type":"exact"},{"name":"Cytomegalovirus retinitis","type":"exact"},{"name":"Retinitis, Cytomegaloviral","type":"exact"},{"name":"cytomegalovirus retinitis","type":"exact"}],"termid":"MONDO:0000878","xrefs":{"Monarch":{"xref_id":"0000878"}}}


id: PBO:0004357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription corepressor (predicted)","termid":"PBO:0004357"}


id: FYPO:0005254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tamoxifen.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on tamoxifen","synonyms":[{"name":"normal cell population growth in presence of tamoxifen","type":"exact"},{"name":"normal cell population growth on tamoxifen","type":"exact"},{"name":"normal cellular response to tamoxifen","type":"related"},{"name":"normal vegetative cell population growth on tamoxifen","type":"exact"}],"termid":"FYPO:0005254"}


id: MONDO:1010928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pseudomyotonia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudomyotonia, non-human animal","termid":"MONDO:1010201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pseudomyotonia, cattle","secondary_identifiers":["OMIA:001464-9913"],"termid":"MONDO:1010928","xrefs":{"Monarch":{"xref_id":"1010928"}}}


id: FYPO:0007915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which Endoplasmic Reticulum localization is normal.","definition_xrefs":["PMID:10641037","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal organelle localization","termid":"FYPO:0007913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal endoplasmic reticulum localization","termid":"FYPO:0007915"}


