# terms

id: MONDO:0016367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatomyositis (DM) is a type of idiopathic inflammatory myopathy characterized by evocative skin lesions and symmetrical proximal muscle weakness.","definition_xrefs":["Orphanet:221"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic disease with skin involvement (obsolete MONDO:0017368)","termid":"MONDO:0017368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"polymyositis","termid":"MONDO:0019127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005093"],"is_obsolete":false,"name":"dermatomyositis","secondary_identifiers":["EFO:0000398","MEDGEN:8331","MESH:D003882","NANDO:1200274","GARD:6263","NCIT:C26744","UMLS:C0011633","NORD:1048","DOID:10223","MedDRA:10012503","ICD9:710.3","icd11.foundation:739030149","SCTID:396230008"],"synonyms":[{"name":"Amyopathic dermatomyositis","type":"related"},{"name":"DM","type":"exact"},{"name":"adult dermatomyositis","type":"narrow"},{"name":"dermatomyositis","type":"exact"},{"name":"dermatopolymyositis","type":"exact"},{"name":"polymyositis with skin involvement","type":"exact"}],"termid":"MONDO:0016367","xrefs":{"Monarch":{"xref_id":"0016367"}}}


id: MONDO:1011329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratoconjunctivitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis, non-human animal","termid":"MONDO:1010330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratoconjunctivitis, non-human animal","termid":"MONDO:1011329","xrefs":{"Monarch":{"xref_id":"1011329"}}}


id: GO:0032295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which satellite glial cells isolate neuronal cell bodies.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ensheathment of neurons","termid":"GO:0007272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ensheathment of neuronal cell bodies","termid":"GO:0032295"}


id: PBO:0005681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate synthase (predicted)","termid":"PBO:0005681"}


id: MONDO:0054636
data:
  {"annotated_genes":["SJAG_01472"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85685],"is_not":false,"summary":null,"term":"MONDO:0054636"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01472":null},"genotype_count":0,"is_obsolete":false,"name":"Skraban-Deardorff syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17953","NORD:153230","UMLS:C4539927","Orphanet:513456","MEDGEN:1627555","OMIM:617616"],"synonyms":[{"name":"SKDEAS","type":"related"},{"name":"Skraban-Deardorff syndrome","type":"exact"},{"name":"WDR26-Related Disorder","type":"exact"},{"name":"intellectual disability with seizures, abnormal Gait, and distinctive Facial features","type":"related"}],"termid":"MONDO:0054636","terms_by_termid":{"MONDO:0054636":null},"xrefs":{"Monarch":{"xref_id":"0054636"}}}


id: FYECO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which rapamycin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ rapamycin","synonyms":[{"name":"+ sirolimus","type":"exact"}],"termid":"FYECO:0000242"}


id: PBO:0072196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 13","termid":"PBO:0072196"}


id: PBO:0017993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor transmembrane transporter Mam1","termid":"PBO:0017993"}


id: MONDO:0019756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lobar holoprosencephaly is the mildest classical form of holoprosencephaly (HPE) characterized by separation of the right and left cerebral hemispheres and lateral ventricules with some continuity across the frontal neocortex, especially rostrally and ventrally.","definition_xrefs":["Orphanet:93924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lobar holoprosencephaly","secondary_identifiers":["GARD:16830","icd11.foundation:121649206","MEDGEN:96559","SCTID:253136007","UMLS:C0431362"],"termid":"MONDO:0019756","xrefs":{"Monarch":{"xref_id":"0019756"}}}


id: PBO:0089259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 GTPase complex scaffold subunit Scd2","termid":"PBO:0089259"}


id: GO:0004201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of interleukin 1-beta by specific cleavage of Asp116-Ala117 and Asp27-Gly28 bonds in precursor. Enzymes with this function can also hydrolyze the terminal bond in the small-molecule substrate, Ac-Tyr-Val-Ala-Asp-NHMec.","definition_xrefs":["EC:3.4.22.36"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-1 activity (obsolete GO:0004201)","synonyms":[{"name":"ICE","type":"broad"},{"name":"caspase-1 activity","type":"exact"}],"termid":"GO:0004201"}


id: GO:0047712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Cypridina luciferin + O2 = oxidized Cypridina luciferin + CO2 + light.","definition_xrefs":["MetaCyc:CYPRIDINA-LUCIFERIN-2-MONOOXYGENASE-RXN","EC:1.13.12.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"Cypridina-luciferin 2-monooxygenase activity","secondary_identifiers":["RHEA:22760"],"synonyms":[{"name":"Cypridina luciferase activity","type":"related"},{"name":"Cypridina-luciferin:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"Cypridina-type luciferase activity","type":"related"},{"name":"luciferase (Cypridina luciferin)","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0047712"}


id: PBO:0047862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(2)(q13)","termid":"PBO:0047862"}


id: PBO:0085401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein involved in protoprophyrin and heme transport; roles in the uptake of protoprophyrin IX and the efflux of heme; expression is induced under both low-heme and low-oxygen conditions; member of the fungal lipid-translocating exporter (LTE) family of proteins","termid":"PBO:0085401"}


id: GO:1902159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["GOC:TermGenie","PMID:11420311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide-activated ion channel activity","type":"exact"}],"termid":"GO:1902159"}


id: PBO:0086810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YIR042C is a non-essential gene","termid":"PBO:0086810"}


id: PBO:0071267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L24","termid":"PBO:0071267"}


id: GO:1902246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cis-abienol.","definition_xrefs":["PMID:22672125","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"cis-abienol metabolic process","termid":"GO:1902244"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"cis-abienol biosynthetic process","synonyms":[{"name":"cis-abienol anabolism","type":"exact"},{"name":"cis-abienol biosynthesis","type":"exact"},{"name":"cis-abienol formation","type":"exact"},{"name":"cis-abienol synthesis","type":"exact"}],"termid":"GO:1902246"}


id: PBO:0073387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 3, actin histidine methyltransferase","termid":"PBO:0073387"}


id: PR:O14251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs120 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs120 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.05c","synonyms":[{"name":"Spom972h-trs120","type":"exact"},{"name":"TRAPP subunit trs120 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14251"}


id: PBO:0027698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mRNA_absent_from_cell","termid":"PBO:0027698"}


id: MONDO:0001775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal obstruction","termid":"MONDO:0002688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic duodenal ileus","secondary_identifiers":["SCTID:52232007","MEDGEN:510177","UMLS:C0156087","ICD9:537.2","DOID:13687","icd11.foundation:379824638"],"termid":"MONDO:0001775","xrefs":{"Monarch":{"xref_id":"0001775"}}}


id: SO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that is never translated into a protein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nc_primary_transcript","synonyms":[{"name":"nc primary transcript","type":"exact"},{"name":"noncoding primary transcript","type":"exact"}],"termid":"SO:0000483"}


id: GO:0035765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a motor neuron precursor cell that contributes to formation of the dorsal motor nucleus of the vagus nerve.","definition_xrefs":["GOC:dgh","PMID:21262462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve formation","termid":"GO:0035764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor neuron precursor migration involved in dorsal motor nucleus of vagus nerve formation","termid":"GO:0035765"}


id: GO:0140119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 acetylated at lysine 27.","definition_xrefs":["PMID:25417107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0140566","GO:0060090"],"is_obsolete":false,"name":"histone H3K27ac reader activity","synonyms":[{"name":"histone H3K27ac modified histone binding","type":"narrow"}],"termid":"GO:0140119"}


id: GO:0002436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of immune complex clearance by monocytes or macrophages.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex clearance","termid":"GO:0002434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance by monocytes and macrophages","termid":"GO:0002436"}


id: FYPO:0000885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000885"}


id: FYPO:0003911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A translation phenotype in which a tRNA pairs with mRNA at the stop codon UGA, and incorporates an amino acid residue into the nascent polypeptide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"UGA suppression","synonyms":[{"name":"UGA suppressor","type":"exact"},{"name":"opal suppression","type":"exact"},{"name":"opal suppressor","type":"exact"}],"termid":"FYPO:0003911"}


id: PBO:0089683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Armadillo-type fold protein, DUF1941 family protein","termid":"PBO:0089683"}


id: PBO:0063428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 2","termid":"PBO:0063428"}


id: MONDO:0017459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central polydactyly of toes (obsolete MONDO:0017459)","secondary_identifiers":["Orphanet:295010","SCTID:253967005"],"synonyms":[{"name":"central polydactyly of foot","type":"exact"},{"name":"mesoaxial polydactyly of toes","type":"exact"},{"name":"mirror foot","type":"exact"}],"termid":"MONDO:0017459","xrefs":{"Monarch":{"xref_id":"0017459"}}}


id: PBO:0065711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvalbumin","termid":"PBO:0065711"}


id: FYPO:0006242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication forks stall at a lower frequency in mutant cells than in wild type during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:28806726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased replication fork stalling during cellular response to DNA damage","synonyms":[{"name":"decreased frequency of replication fork stalling during cellular response to DNA damage","type":"exact"},{"name":"decreased replication fork stalling during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased replication fork stalling during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced replication fork stalling during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0006242"}


id: PR:Q9C0U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps5 gene.","definition_xrefs":["UniProtKB:Q9C0U7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein vps5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.01","synonyms":[{"name":"Spom972h-vps5","type":"exact"}],"termid":"PR:Q9C0U7"}


id: PBO:0075561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG21 abhydrolase domain containing, maspardin","termid":"PBO:0075561"}


id: PBO:0054012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1342","termid":"PBO:0054012"}


id: GO:1900881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 18-methylnonadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"18-methylnonadec-1-ene metabolic process","termid":"GO:1900880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"18-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"18-methylnonadec-1-ene formation","type":"exact"},{"name":"18-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900881"}


id: GO:0018051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-tryptophan amide by hydrolysis and oxidation of an interior Trp-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0098"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-tryptophan amidation (obsolete GO:0018051)","termid":"GO:0018051"}


id: GO:0008460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O.","definition_xrefs":["EC:4.2.1.46","RHEA:17221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dTDP-glucose 4,6-dehydratase activity","secondary_identifiers":["KEGG_REACTION:R06513","MetaCyc:DTDPGLUCDEHYDRAT-RXN"],"synonyms":[{"name":"TDP-glucose oxidoreductase activity","type":"related"},{"name":"dTDP-glucose 4,6-hydro-lyase (dTDP-4-dehydro-6-deoxy-D-glucose-forming)","type":"related"},{"name":"dTDP-glucose 4,6-hydro-lyase activity","type":"related"},{"name":"dTDPglucose 4,6-dehydratase activity","type":"related"},{"name":"dTDPglucose 4,6-hydro-lyase activity","type":"related"},{"name":"thymidine diphosphoglucose oxidoreductase activity","type":"related"}],"termid":"GO:0008460"}


id: PBO:0024836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Nop9 (predicted)","termid":"PBO:0024836"}


id: PR:O13910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar ribonucleoprotein protein MPP10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00881","PRO:DNx","PANTHER:PTHR17039:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar ribonucleoprotein protein mpp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.03","secondary_identifiers":["UniProtKB:O13910"],"synonyms":[{"name":"Spom972h-MPHOSPH10","type":"exact"}],"termid":"PR:O13910"}


id: GO:0009098
data:
  {"annotated_genes":["SJAG_03985","SJAG_03562","SJAG_03243","SJAG_06635","SJAG_02841","SJAG_04149","SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59350,75161,77273,80268,91010,103615,113585],"is_not":false,"summary":null,"term":"GO:0009098"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-leucine metabolic process","termid":"GO:0006551"},{"relation_name":"is_a","term_name":"pyruvate family amino acid biosynthetic process","termid":"GO:0009079"},{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-leucine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:LEUSYN-PWY"],"synonyms":[{"name":"L-leucine anabolism","type":"exact"},{"name":"L-leucine biosynthesis","type":"exact"},{"name":"L-leucine formation","type":"exact"},{"name":"L-leucine synthesis","type":"exact"},{"name":"leucine biosynthetic process","type":"broad"}],"termid":"GO:0009098","terms_by_termid":{"GO:0009098":null}}


id: PBO:0029659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029659"}


id: PBO:0111737
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exogenous_promoter","termid":"PBO:0111737"}


id: PBO:0064410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 6A","termid":"PBO:0064410"}


id: FYPO:0002590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any tRNA processing intermediates with 3' extensions measured in the mitochondria is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions","synonyms":[{"name":"increased accumulation of mitochondrial tRNA processing intermediates with 3' extensions","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during vegetative growth","type":"exact"}],"termid":"FYPO:0002590"}


id: PBO:0027552
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_replication_origin","termid":"PBO:0027552"}


id: MONDO:0015098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete situs inversus totalis (obsolete MONDO:0015098)","synonyms":[{"name":"obsolete situs inversus totalis (disease)","type":"exact"}],"termid":"MONDO:0015098","xrefs":{"Monarch":{"xref_id":"0015098"}}}


id: GO:0071175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN1 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0071175"}


id: MONDO:0021211
data:
  {"annotated_genes":["SJAG_00579","SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007959"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"central nervous system neoplasm","termid":"MONDO:0006130"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"brain neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:14216","UMLS:C0006118","EFO:0003833","NCIT:C2907"],"synonyms":[{"name":"brain neoplasm (disease)","type":"exact"},{"name":"brain neoplasms","type":"exact"},{"name":"brain tumor","type":"exact"},{"name":"brain tumour","type":"exact"},{"name":"neoplasm of brain","type":"exact"},{"name":"neoplasm of the brain","type":"exact"},{"name":"tumor of brain","type":"exact"},{"name":"tumor of the Brain","type":"exact"},{"name":"tumour of brain","type":"exact"},{"name":"tumour of the Brain","type":"exact"}],"termid":"MONDO:0021211","terms_by_termid":{"MONDO:0007959":null,"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0021211"}}}


id: MONDO:0016484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by congenital, bilateral sensorineural hearing loss that is mild to moderate in the low frequencies and severe to profound in the higher frequencies, no abnormalities in the vestibular system, and retinitis pigmentosa.","definition_xrefs":["NCIT:C126328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome","termid":"MONDO:0019501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 2","secondary_identifiers":["UMLS:C0339534","ICD10CM:H35.5","NANDO:1200943","GARD:5440","icd11.foundation:33632175","SCTID:232058008","DOID:0110827","Orphanet:231178","MEDGEN:83288"],"synonyms":[{"name":"USH2","type":"exact"},{"name":"Usher syndrome type 2","type":"exact"}],"termid":"MONDO:0016484","xrefs":{"Monarch":{"xref_id":"0016484"}}}


id: FYPO:0009059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex is increased.","definition_xrefs":["PMID:36749320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"increased protein localization to cell periphery during vegetative growth","termid":"FYPO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to cell cortex during vegetative growth","synonyms":[{"name":"higher protein localization to cell cortex during vegetative growth","type":"exact"},{"name":"increased protein localisation to cell cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0009059"}


id: GO:0001018
data:
  {"annotated_genes":["SJAG_00634","SJAG_03014"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77769,98501],"is_not":false,"summary":null,"term":"GO:0001018"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region that controls the transcription of the mitochondrial DNA.","definition_xrefs":["GOC:txnOH","GOC:vw","PMID:20056105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00634":null,"SJAG_03014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488","GO:0000976"],"is_obsolete":false,"name":"mitochondrial promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001045","GO:0000997","GO:0070361","GO:0070362","GO:0070363","GO:0070364","GO:0001044"],"synonyms":[{"name":"HSP coding strand binding","type":"narrow"},{"name":"HSP non-coding strand binding","type":"narrow"},{"name":"HSPas binding","type":"narrow"},{"name":"HSPs binding","type":"narrow"},{"name":"LSP coding strand binding","type":"narrow"},{"name":"LSP non-coding strand binding","type":"narrow"},{"name":"LSPas binding","type":"narrow"},{"name":"LSPs binding","type":"narrow"},{"name":"mitochondrial RNA polymerase core promoter proximal region sequence-specific DNA binding","type":"related"},{"name":"mitochondrial RNA polymerase core promoter sequence-specific DNA binding","type":"related"},{"name":"mitochondrial RNA polymerase regulatory region DNA binding","type":"related"},{"name":"mitochondrial RNA polymerase regulatory region sequence-specific DNA binding","type":"related"},{"name":"mitochondrial heavy strand promoter anti-sense binding","type":"narrow"},{"name":"mitochondrial heavy strand promoter sense binding","type":"narrow"},{"name":"mitochondrial light strand promoter anti-sense binding","type":"narrow"},{"name":"mitochondrial light strand promoter sense binding","type":"narrow"},{"name":"mitochondrial proximal promoter sequence-specific DNA binding","type":"related"}],"termid":"GO:0001018","terms_by_termid":{"GO:0001018":null}}


id: PBO:0075087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 137","termid":"PBO:0075087"}


id: MONDO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic voice disorder characterized by momentary periods of uncontrolled spasms of the muscles of the larynx.","direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"},{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"spasmodic dystonia","secondary_identifiers":["SCTID:3331000119108","UMLS:C1963946","ICD9:478.79","Orphanet:93961","DOID:0050844","MEDGEN:409603","MESH:D055154"],"synonyms":[{"name":"abductor spasmodic dysphonia","type":"narrow"},{"name":"adductor spasmodic dysphonia","type":"narrow"},{"name":"laryngeal dyskinesia","type":"exact"},{"name":"laryngeal dystonia","type":"exact"},{"name":"mixed spasmodic dysphonia (type)","type":"related"},{"name":"spasmodic dysphonia","type":"exact"},{"name":"spastic dysphonia","type":"exact"}],"termid":"MONDO:0000485","xrefs":{"Monarch":{"xref_id":"0000485"}}}


id: PBO:0059598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 10","termid":"PBO:0059598"}


id: MOD:02006
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with a stearoylsulfanyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"stearoylated residue","termid":"MOD:02001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"S-stearoylated residue","termid":"MOD:02006"}


id: SO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_region","synonyms":[{"name":"UTR region","type":"exact"}],"termid":"SO:0000837"}


id: MONDO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital melanocytic nevus (obsolete MONDO:0044790)","termid":"MONDO:0044790","xrefs":{"Monarch":{"xref_id":"0044790"}}}


id: MONDO:0016134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary systemic disease with peripheral neuropathy (obsolete MONDO:0016134)","secondary_identifiers":["Orphanet:207021"],"termid":"MONDO:0016134","xrefs":{"Monarch":{"xref_id":"0016134"}}}


id: PBO:0043525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA6 antisense RNA 1","termid":"PBO:0043525"}


id: PBO:0002655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication pre-initiation complex subunit Cdc45","termid":"PBO:0002655"}


id: PBO:0058441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5006","termid":"PBO:0058441"}


id: GO:0033244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"penicillin metabolic process","termid":"GO:0042316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of penicillin metabolic process","synonyms":[{"name":"regulation of penicillin metabolism","type":"exact"}],"termid":"GO:0033244"}


id: GO:0043165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an outer membrane of the type formed in Gram-negative bacteria. This membrane is enriched in polysaccharide and protein, and the outer leaflet of the membrane contains specific lipopolysaccharide structures.","definition_xrefs":["ISBN:0135712254","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"part_of","term_name":"cell envelope organization","termid":"GO:0043163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell outer membrane assembly","synonyms":[{"name":"cell outer membrane biogenesis","type":"related"}],"termid":"GO:0043165"}


id: PBO:0074325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1","termid":"PBO:0074325"}


id: FYPO:0008037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate of elongation of a transcript initiated from an RNA polymerase II promoter is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription elongation from RNA polymerase II promoter","termid":"FYPO:0004065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of transcription elongation from RNA polymerase II promoter","termid":"FYPO:0008037"}


id: PATO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a point.","definition_xrefs":["PATOC:http://www.merriam-webster.com/dictionary/pointed"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pointed","termid":"PATO:0002258"}


id: FYPO:0003455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of the breakdown of arginine into other compounds, including proline, is decreased.","definition_xrefs":["PomBase:mah","GO:0019493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased arginine catabolic process to proline","synonyms":[{"name":"decreased arginine catabolic process to proline during mitotic cell cycle","type":"related"},{"name":"decreased arginine catabolic process to proline during vegetative growth","type":"exact"},{"name":"decreased arginine catabolism to proline","type":"exact"},{"name":"reduced arginine catabolic process to proline","type":"exact"}],"termid":"FYPO:0003455"}


id: PBO:0073651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIL1 nucleotide exchange factor","termid":"PBO:0073651"}


id: PBO:0004330
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Spindle Disanchored","termid":"PBO:0004330"}


id: PBO:0083689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enoyl reductase; catalyzes last step in each cycle of very long chain fatty acid elongation; localizes to ER, highly enriched in a structure marking nuclear-vacuolar junctions; coimmunoprecipitates with elongases Elo2p and Elo3p; protein increases in abundance and relative distribution to ER foci increases upon DNA replication stress; human homolog TECR implicated in nonsyndromic mental retardation, can complement yeast mutant","termid":"PBO:0083689"}


id: MONDO:0100263
data:
  {"annotated_genes":["SJAG_02997"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013930"},{"annotations":[87546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013931"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0006025","MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX6 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX6 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX6 defect","type":"exact"}],"termid":"MONDO:0100263","terms_by_termid":{"MONDO:0013930":null,"MONDO:0013931":null},"xrefs":{"Monarch":{"xref_id":"0100263"}}}


id: RO:HOM0000024
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that results from a duplication preceding a given speciation event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_out-paralogy_relationship_with","synonyms":[{"name":"alloparalogy","type":"exact"},{"name":"out-paralogous to","type":"exact"},{"name":"outparalogy","type":"exact"}],"termid":"RO:HOM0000024"}


id: MONDO:0016000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism, familial isolated 1","termid":"MONDO:0007796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial isolated hypoparathyroidism due to impaired PTH secretion","secondary_identifiers":["Orphanet:189466","UMLS:C5680524","MEDGEN:1843283","GARD:17088"],"termid":"MONDO:0016000","xrefs":{"Monarch":{"xref_id":"0016000"}}}


id: MONDO:1010768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitiligo, non-human animal","termid":"MONDO:1010136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, cattle","secondary_identifiers":["OMIA:001055-9913"],"termid":"MONDO:1010768","xrefs":{"Monarch":{"xref_id":"1010768"}}}


id: PR:P23636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P23636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major serine/threonine-protein phosphatase PP2A-2 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.07c","synonyms":[{"name":"Spom972h-ppa2","type":"exact"}],"termid":"PR:P23636"}


id: GO:0071142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a single type of SMAD family proteins. In the absence of Smad4, phosphorylation of R-SMADs results in their homotrimerization. However, these complexes do not appear to import into the nucleus and are assumed to be transcriptionally inactive.","definition_xrefs":["PMID:11779505","PMID:9670020","PMID:16322555","GOC:bhm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD protein complex","termid":"GO:0071141"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"homomeric SMAD protein complex","secondary_identifiers":["GO:0071143"],"synonyms":[{"name":"SMAD1 homotrimer complex","type":"narrow"},{"name":"SMAD1 protein complex","type":"narrow"},{"name":"SMAD2 homotrimer complex","type":"narrow"},{"name":"SMAD2 protein complex","type":"narrow"},{"name":"SMAD3 homotrimer complex","type":"narrow"},{"name":"SMAD3 protein complex","type":"narrow"}],"termid":"GO:0071142"}


id: GO:0010962
data:
  {"annotated_genes":["SJAG_00610","SJAG_04668","SJAG_04771","SJAG_04666","SJAG_01255","SJAG_04462","SJAG_02278","SJAG_00963","SJAG_01376","SJAG_04659","SJAG_04509","SJAG_03705","SJAG_00424","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79182,77507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[87833,92744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[88214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[91094,103165,106244,118367,118237,105670,92728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[103167,95266,89761,92750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of glucan biosynthesis. Glucan biosynthetic processes are the chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"regulates","term_name":"glucan biosynthetic process","termid":"GO:0009250"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_00963":null,"SJAG_01255":null,"SJAG_01376":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010962","terms_by_termid":{"GO:0032951":null,"GO:0045719":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0049649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 3","termid":"PBO:0049649"}


id: GO:0042300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = beta-amyrin.","definition_xrefs":["RHEA:31007","PMID:9746369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"beta-amyrin synthase activity","secondary_identifiers":["EC:5.4.99.39","MetaCyc:RXN-7570"],"synonyms":[{"name":"2,3-oxidosqualene beta-amyrin cyclase","type":"exact"},{"name":"oxidosqualene:beta-amyrin cyclase activity","type":"exact"}],"termid":"GO:0042300"}


id: PBO:0047075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member D, pseudogene","termid":"PBO:0047075"}


id: PBO:0049787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 22 (gene/pseudogene)","termid":"PBO:0049787"}


id: PBO:0090531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Rossman fold DUF1776 family protein","termid":"PBO:0090531"}


id: MONDO:0014582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects, early-onset muscle weakness, and low amplitude of the miniature endplate potential and current that has material basis in ompound heterozygous mutation in the CHRNB1 gene on chromosome 17p13.","definition_xrefs":["DOID:0110680","PMID:25792100","PMID:10562302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 2C","secondary_identifiers":["OMIM:616314","UMLS:C4225373","GARD:16083","MEDGEN:903254"],"synonyms":[{"name":"CMS2C","type":"exact"},{"name":"congenital myasthenic syndrome 2C associated with acetylcholine receptor deficiency","type":"exact"},{"name":"congenital myasthenic syndrome type 2C","type":"exact"},{"name":"myasthenic syndrome, congenital, 2C, associated with acetylcholine receptor deficiency","type":"related"}],"termid":"MONDO:0014582","xrefs":{"Monarch":{"xref_id":"0014582"}}}


id: FYPO:0008114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amiloride. Cells stop growing (and may die) at a concentration of amiloride that allows wild type cells to grow.","definition_xrefs":["PMID:15537393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to amiloride","termid":"FYPO:0008114"}


id: FYPO:0000547
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein modification is increased. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"increased protein modification","termid":"FYPO:0002499"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null,"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased protein modification during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"increased protein modification during mitotic cell cycle","type":"related"},{"name":"increased protein/peptide modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000547","terms_by_termid":{"FYPO:0001038":null}}


id: MONDO:0008764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the GUCY2D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"GUCY2D-related recessive retinopathy","termid":"MONDO:0100453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 1","secondary_identifiers":["UMLS:C2931258","ICD10CM:H35.5","MEDGEN:419026","DOID:0110078","GARD:635","OMIM:204000"],"synonyms":[{"name":"CRB","type":"related"},{"name":"GUCY2D Leber congenital amaurosis","type":"exact"},{"name":"LCA","type":"related"},{"name":"LCA1","type":"exact"},{"name":"Leber congenital amaurosis 1","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in GUCY2D","type":"exact"},{"name":"Leber congenital amaurosis type 1","type":"exact"},{"name":"amaurosis congenita of Leber 1","type":"related"},{"name":"amaurosis congenita of Leber I","type":"exact"},{"name":"amaurosis congenita of Leber, type 1","type":"related"},{"name":"retinal blindness, congenital","type":"related"}],"termid":"MONDO:0008764","xrefs":{"Monarch":{"xref_id":"0008764"}}}


id: FYPO:0000676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which protein targeting to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"},{"relation_name":"is_a","term_name":"abnormal protein targeting during vegetative growth","termid":"FYPO:0000675"},{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein targeting to vacuole","synonyms":[{"name":"abnormal protein targeting to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein targeting to vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar protein sorting","type":"exact"}],"termid":"FYPO:0000676"}


id: MONDO:0019397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"unknown leukodystrophy","secondary_identifiers":["Orphanet:84096"],"termid":"MONDO:0019397","xrefs":{"Monarch":{"xref_id":"0019397"}}}


id: GO:1900869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tatiopterin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tatiopterin metabolic process","synonyms":[{"name":"tatiopterin metabolism","type":"exact"}],"termid":"GO:1900869"}


id: GO:0140220
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound intracellular compartment that is formed upon internalization of a pathogen into a host cell, and in which the pathogen resides.","definition_xrefs":["PMID:10560000","PMID:26842840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pathogen-containing vacuole","synonyms":[{"name":"pathogen inclusion","type":"related"},{"name":"pathogen-containing compartment","type":"related"}],"termid":"GO:0140220"}


id: PBO:0060326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO1D divergent transcript","termid":"PBO:0060326"}


id: PBO:0114352
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metazoa do not have tef3 due to differenees in the translation machinery","termid":"PBO:0114352"}


id: PBO:0050977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 20","termid":"PBO:0050977"}


id: PBO:0081425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280C","termid":"PBO:0081425"}


id: PBO:0056143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis 1 associated protein","termid":"PBO:0056143"}


id: PBO:0060039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 27","termid":"PBO:0060039"}


id: PBO:0056106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA1 pseudogene 1","termid":"PBO:0056106"}


id: PBO:0089871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase T subunit","termid":"PBO:0089871"}


id: PBO:0017774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Nnf1","termid":"PBO:0017774"}


id: PBO:0064541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 2","termid":"PBO:0064541"}


id: PBO:0083037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta adaptin-like subunit of the clathrin associated protein complex; functions in transport of alkaline phosphatase to the vacuole via the alternate pathway; suppressor of loss of casein kinase 1 function; the clathrin associated protein complex is also known as AP-3","termid":"PBO:0083037"}


id: GO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism (symbiont) effects a change in the structure or function of its host organism, mediated by a substance secreted by the Tat complex in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by Tat complex (obsolete GO:0085025)","synonyms":[{"name":"modification by symbiont of host morphology or physiology via protein secreted by the Tat secretion system","type":"exact"}],"termid":"GO:0085025"}


id: GO:1903566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cilium.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22072986","GOC:cilia","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cilium","termid":"GO:1903564"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cilium","synonyms":[{"name":"activation of protein localization to cilium","type":"narrow"},{"name":"up regulation of protein localization to cilium","type":"exact"},{"name":"up-regulation of protein localization to cilium","type":"exact"},{"name":"upregulation of protein localization to cilium","type":"exact"}],"termid":"GO:1903566"}


id: PBO:0083103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase encoded within the telomeric Y' element; Y' -helicase protein 1","termid":"PBO:0083103"}


id: FYPO:0006445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation of one or more proteins involved in amino acid biosynthesis is decreased.","definition_xrefs":["PomBase:mah","PMID:29432178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased translation of amino acid biosynthesis proteins during vegetative growth","synonyms":[{"name":"decreased translation of amino acid biosynthesis genes during vegetative growth","type":"exact"},{"name":"decreased translation of amino acid biosynthesis mRNAs during vegetative growth","type":"exact"},{"name":"decreased translation of amino acid biosynthesis proteins during mitotic cell cycle","type":"related"},{"name":"reduced translation of amino acid biosynthesis proteins during vegetative growth","type":"exact"}],"termid":"FYPO:0006445"}


id: GO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The specific immune response mediated by antibodies. As in, but not restricted to, the taxon Protostomia (Protostomia, ncbi_taxonomy_id:33317).","definition_xrefs":["GOC:add","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete humoral defense mechanism (sensu Protostomia) (obsolete GO:0016065)","synonyms":[{"name":"humoral defence mechanism (sensu Protostomia)","type":"exact"},{"name":"humoral defense mechanism (sensu Protostomia)","type":"exact"}],"termid":"GO:0016065"}


id: GO:0021788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the neural tube is directed to a specific target site in the neural tube in response to an attractive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:cls","PMID:14699587","GOC:dph","GO_REF:0000021","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in neural tube","termid":"GO:0021786"},{"relation_name":"is_a","term_name":"chemoattraction of branchiomotor axon","termid":"GO:0021792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of branchiomotor neuron axon in neural tube","synonyms":[{"name":"positive chemotaxis of branchiomotor neuron axon in neural tube","type":"exact"}],"termid":"GO:0021788"}


id: PBO:0074818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18A","termid":"PBO:0074818"}


id: GO:1990236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the proteasome core complex (AKA core particle (CP)) from the cytoplasm into the nucleus.","definition_xrefs":["PMID:23982732","GOC:dos","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"import into nucleus","termid":"GO:0051170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"proteasome core complex import into nucleus","termid":"GO:1990236"}


id: MONDO:0004004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the peripheral motor nerves.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"motor neuron disorder","termid":"MONDO:0020128"},{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"},{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"motor nerve neuritis","secondary_identifiers":["MEDGEN:68610","DOID:683","MESH:D009443","NCIT:C3500","SCTID:95663000","UMLS:C0235025"],"synonyms":[{"name":"motor neuritis","type":"exact"}],"termid":"MONDO:0004004","xrefs":{"Monarch":{"xref_id":"0004004"}}}


id: PBO:0068885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 126, pseudogene","termid":"PBO:0068885"}


id: GO:0035418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell junction","termid":"GO:1902414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to synapse","synonyms":[{"name":"protein localisation to synapse","type":"exact"}],"termid":"GO:0035418"}


id: PBO:0067344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 441, pseudogene","termid":"PBO:0067344"}


id: PBO:0041968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 12","termid":"PBO:0041968"}


id: PBO:0005782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark homolog","termid":"PBO:0005782"}


id: GO:0043705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanophycin, a non-protein, non-ribosomally produced amino acid polymer composed of an aspartic acid backbone and arginine side groups.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanophycin metabolic process","synonyms":[{"name":"cyanophycin metabolism","type":"exact"},{"name":"multi-L-arginyl-poly(L-aspartic acid) metabolism","type":"exact"}],"termid":"GO:0043705"}


id: GO:0099519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dense core granules along cytoskeletal fibers, such as microtubules or actin filaments.","definition_xrefs":["GOC:kmv","PMID:23358451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle cytoskeletal trafficking","termid":"GO:0099518"},{"relation_name":"is_a","term_name":"dense core granule transport","termid":"GO:1901950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"dense core granule cytoskeletal transport","synonyms":[{"name":"dense core vesicle cytoskeletal trafficking","type":"exact"}],"termid":"GO:0099519"}


id: PBO:0077353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM92 antisense RNA 1","termid":"PBO:0077353"}


id: PBO:0070785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 15","termid":"PBO:0070785"}


id: GO:0106343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction glutarate + 2-oxoglutarate + O2 = (S)-2-hydroxyglutarate + succinate + CO2.","definition_xrefs":["PMID:30498244","RHEA:13821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutarate dioxygenase activity","secondary_identifiers":["EC:1.14.11.64"],"termid":"GO:0106343"}


id: PATO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Being supported by a peduncle or stalk.","definition_xrefs":["PATOC:GV"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedunculate","termid":"PATO:0002388"}


id: GO:1902185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of shoot apical meristem development.","definition_xrefs":["PMID:21496644","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of shoot apical meristem development","termid":"GO:1902183"},{"relation_name":"positively_regulates","term_name":"shoot apical meristem development","termid":"GO:1902182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of shoot apical meristem development","synonyms":[{"name":"activation of SAM development","type":"exact"},{"name":"activation of primary shoot meristem development","type":"related"},{"name":"activation of promeristem development","type":"broad"},{"name":"activation of shoot apical meristem development","type":"narrow"},{"name":"positive regulation of SAM development","type":"exact"},{"name":"positive regulation of primary shoot meristem development","type":"related"},{"name":"positive regulation of promeristem development","type":"broad"},{"name":"up regulation of SAM development","type":"exact"},{"name":"up regulation of primary shoot meristem development","type":"related"},{"name":"up regulation of promeristem development","type":"broad"},{"name":"up regulation of shoot apical meristem development","type":"exact"},{"name":"up-regulation of SAM development","type":"exact"},{"name":"up-regulation of primary shoot meristem development","type":"related"},{"name":"up-regulation of promeristem development","type":"broad"},{"name":"up-regulation of shoot apical meristem development","type":"exact"},{"name":"upregulation of SAM development","type":"exact"},{"name":"upregulation of primary shoot meristem development","type":"related"},{"name":"upregulation of promeristem development","type":"broad"},{"name":"upregulation of shoot apical meristem development","type":"exact"}],"termid":"GO:1902185"}


id: PBO:0090634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotransferase/ diacylglycerol ethanolaminesphotransferase Ept1","termid":"PBO:0090634"}


id: GO:1905382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II.","definition_xrefs":["PMID:10022900","GOC:TermGenie","GOC:bhm","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of snRNA transcription by RNA polymerase II","termid":"GO:1905380"},{"relation_name":"positively_regulates","term_name":"snRNA transcription by RNA polymerase II","termid":"GO:0042795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0016073"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355","GO:0016073"],"is_obsolete":false,"name":"positive regulation of snRNA transcription by RNA polymerase II","synonyms":[{"name":"activation of snRNA transcription from Pol II promoter","type":"narrow"},{"name":"activation of snRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1905382"}


id: PBO:0043528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coenzyme A synthase","termid":"PBO:0043528"}


id: PR:Q10207
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D1.01 gene.","definition_xrefs":["UniProtKB:Q10207","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D1.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.01","synonyms":[{"name":"Spom972h-SPBC17D1.01","type":"exact"}],"termid":"PR:Q10207"}


id: FYPO:0006089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione hydrolase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal glutathione hydrolase activity","termid":"FYPO:0006089"}


id: PBO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininemia","termid":"PBO:0001251"}


id: GO:0140298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of iron into a cell via binding to an extracellular receptor, which is internalized by endocytosis.","definition_xrefs":["PMID:23092063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810","GO:0098771"],"is_obsolete":false,"name":"endocytic iron import into cell","synonyms":[{"name":"iron import into cell by endocytosis","type":"exact"}],"termid":"GO:0140298"}


id: GO:0036011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of an imaginal disc-derived leg into a series of semi-repetitive parts or segments. The Drosophila leg, for example, has nine segments, each separated from the next by a flexible joint.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage segmentation","termid":"GO:0035285"},{"relation_name":"part_of","term_name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived leg segmentation","termid":"GO:0036011"}


id: PBO:0056807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 4A","termid":"PBO:0056807"}


id: GO:0010117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protection mechanism used by plants and cyanobacteria under conditions of excess energy absorption as a consequence of the light reactions of photosynthesis.","definition_xrefs":["PMID:30765616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoprotection","termid":"GO:0010117"}


id: MONDO:0010488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the KIF4A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 100","secondary_identifiers":["OMIM:300923","DOID:0112040","MEDGEN:855516","UMLS:C3890167"],"synonyms":[{"name":"KIF4A non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX100","type":"related"},{"name":"intellectual developmental disorder, X-linked 100, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 100","type":"exact"},{"name":"intellectual disability, X-linked type 100","type":"exact"},{"name":"mental retardation, X-linked 100","type":"related"},{"name":"mental retardation, X-linked type 100","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in KIF4A","type":"exact"}],"termid":"MONDO:0010488","xrefs":{"Monarch":{"xref_id":"0010488"}}}


id: PBO:0052523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 36","termid":"PBO:0052523"}


id: MONDO:0009439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the ALOX12B gene, encoding arachidonate 12-lipoxygenase, 12R-type. It is characterized by dry, thickened, scaly skin.","definition_xrefs":["NCIT:C132827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self-healing collodion baby","termid":"MONDO:0017267"},{"relation_name":"is_a","term_name":"congenital non-bullous ichthyosiform erythroderma","termid":"MONDO:0019306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 2","secondary_identifiers":["DOID:0060710","MEDGEN:854762","OMIM:242100","UMLS:C3888093","GARD:15187"],"synonyms":[{"name":"ARCI2","type":"exact"},{"name":"Brocq congenital ichthyosiform erythroderma nonbullous form","type":"exact"},{"name":"NBCIE","type":"related"},{"name":"NCIE","type":"related"},{"name":"NCIE1","type":"exact"},{"name":"autosomal recessive congenital ichthyosis type 2","type":"exact"},{"name":"collodion baby, self-healing","type":"related"},{"name":"ichthyosiform erythroderma, Brocq congenital, nonbullous form","type":"related"},{"name":"ichthyosiform erythroderma, Brocq congenital, nonbullous form, formerly","type":"related"},{"name":"ichthyosiform erythroderma, congenital, nonbullous, 1","type":"related"},{"name":"ichthyosiform erythroderma, nonbullous congenital, 1","type":"related"},{"name":"ichthyosiform erythroderma, nonbullous congenital, 1, formerly","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 2","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 2","type":"exact"},{"name":"nonbullous congenital ichthyosiform erythroderma 1","type":"exact"}],"termid":"MONDO:0009439","xrefs":{"Monarch":{"xref_id":"0009439"}}}


id: MONDO:0007155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arteritis, familial granulomatous, with juvenile polyarthritis","secondary_identifiers":["MEDGEN:349529","UMLS:C1862510","MESH:C566253","OMIM:108050"],"synonyms":[{"name":"arteritis, familial granulomatous, with juvenile polyarthritis","type":"exact"}],"termid":"MONDO:0007155","xrefs":{"Monarch":{"xref_id":"0007155"}}}


id: GO:0000312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The smaller of the two subunits of a plastid ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar small ribosomal subunit","termid":"GO:0000314"},{"relation_name":"part_of","term_name":"plastid ribosome","termid":"GO:0009547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"plastid small ribosomal subunit","termid":"GO:0000312"}


id: PBO:0090839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER packaging chaperone for amino acid permeases Psh3","termid":"PBO:0090839"}


id: PBO:0077407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 141","termid":"PBO:0077407"}


id: GO:0043830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fumarate + coenzyme M + coenzyme B = succinate + coenzyme M + coenzyme B + heterodisulfide.","definition_xrefs":["PMID:2509466"],"gene_count":0,"genotype_count":0,"name":"obsolete thiol-driven fumarate reductase activity (obsolete GO:0043830)","termid":"GO:0043830"}


id: FYPO:0004719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes and a single, normally located septum, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah","PMID:8387358","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with condensed chromosomes","termid":"FYPO:0003738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell","synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes, septated cell during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated vegetative cell","type":"exact"}],"termid":"FYPO:0004719"}


id: GO:0035236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neuropeptide proctolin, to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"proctolin receptor activity","termid":"GO:0035236"}


id: PBO:0026715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_doxorubicin","termid":"PBO:0026715"}


id: GO:0010514
data:
  {"annotated_genes":["SJAG_01699","SJAG_03081","SJAG_02444","SJAG_01311","SJAG_04206","SJAG_01084","SJAG_00256","SJAG_05153","SJAG_04026","SJAG_02773","SJAG_03802","SJAG_04312","SJAG_04009","SJAG_02785","SJAG_03735","SJAG_02723","SJAG_01718","SJAG_00600","SJAG_00781","SJAG_03501","SJAG_03486","SJAG_01254","SJAG_01113","SJAG_02730","SJAG_03309","SJAG_02266","SJAG_00526","SJAG_03067","SJAG_00210","SJAG_02066","SJAG_04813","SJAG_03346","SJAG_06638","SJAG_02592","SJAG_00472","SJAG_02472","SJAG_00975"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88348,89534,106603,116471,116811,118560],"is_not":false,"summary":null,"term":"GO:0010514"},{"annotations":[98738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[115915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[91732,88525,93252,106976,100865,102168,115862,104819,109337,106822,114799,116399,106235,107172,94552,106138,94692],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[88169,109130,101709,116605,119421,119422,103684,100822,104760,108898,107376,99823],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900237"}]},"cv_name":"biological_process","definition":"The process in which a cell initiates conjugation with cellular fusion. Conjugation with cellular fusion is the process that results in the union of cellular and genetic information from compatible mating types.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00210":null,"SJAG_00256":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_02066":null,"SJAG_02266":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03346":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04312":null,"SJAG_04813":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"induction of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010514","terms_by_termid":{"GO:0010514":null,"GO:0010515":null,"GO:0031141":null,"GO:0031142":null,"GO:1900237":null}}


id: PBO:0052945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte associated protein 2","termid":"PBO:0052945"}


id: MOD:01545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01545"}


id: PBO:0034418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_indirect_input_(obsolete_has_indirect_input)","termid":"PBO:0034418"}


id: GO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoarabinomannan.","definition_xrefs":["PMID:10586073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPI anchor binding","termid":"GO:0034235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"lipoarabinomannan binding","synonyms":[{"name":"LAM binding","type":"exact"}],"termid":"GO:0001876"}


id: GO:0030168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug.","definition_xrefs":["PMID:27403440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet activation","secondary_identifiers":["Reactome:R-HSA-76002","Reactome:R-HSA-392023","Reactome:R-HSA-418592","Reactome:R-HSA-392170"],"synonyms":[{"name":"blood coagulation, platelet activation","type":"exact"}],"termid":"GO:0030168"}


id: PBO:0049132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPRIN family member 3","termid":"PBO:0049132"}


id: MOD:00825
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-cysteine residue by a thioester bond to form S-(L-phenylalaninyl)-L-cysteine.","definition_xrefs":["PubMed:12591958","RESID:AA0414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-phenylalanyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-phenylpropanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Phenylalanyl cysteine thioester (Cys-Phe)","type":"exact"},{"name":"S-(2-amino-3-phenylpropanoyl)cysteine","type":"exact"},{"name":"S-(L-phenylalanyl)-L-cysteine","type":"exact"},{"name":"XLNK1PheSCys","type":"exact"},{"name":"phenylalanine cysteine thioester","type":"exact"}],"termid":"MOD:00825"}


id: GO:0018967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving tetrachloroethylene (tetrachloroethene), a derivative of ethene with the hydrogen atoms replaced by chlorines. Tetrachloroethene has been used primarily as a solvent in dry-cleaning industries and to a lesser extent as a degreasing solvent.","gene_count":0,"genotype_count":0,"name":"obsolete tetrachloroethylene metabolic process (obsolete GO:0018967)","synonyms":[{"name":"tetrachloroethene metabolic process","type":"exact"},{"name":"tetrachloroethene metabolism","type":"exact"},{"name":"tetrachloroethylene metabolism","type":"exact"}],"termid":"GO:0018967"}


id: SO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region within an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"part_of","term_name":"spliceosomal_intron","termid":"SO:0000662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosomal_intron_region","synonyms":[{"name":"spliceosomal intron region","type":"exact"}],"termid":"SO:0000841"}


id: PBO:0040164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte associated metabolic related lncRNA 2","termid":"PBO:0040164"}


id: MONDO:0013051
data:
  {"annotated_genes":["SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85491],"is_not":false,"summary":null,"term":"MONDO:0013051"}]},"cv_name":"mondo","definition":"Autosomal recessive cutis laxa type 2B is a rare, hereditary, developmental defect with connective tissue involvement characterized by cutis laxa of variable severity, in utero growth restriction, congenital hip dislocation and joint hyperlaxity, wrinkling of the skin, in particular the dorsum of hands and feet, and progeroid facial features. Hypotonia, developmental delay, and intellectual disability are common. In addition, cataracts, corneal clouding, wormian bones, lipodystrophy and osteopenia have been reported.","definition_xrefs":["Orphanet:357064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 2","termid":"MONDO:0019573"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004736","MONDO:0005066","MONDO:0005497","MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive cutis laxa type 2B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612940","GARD:1641","MEDGEN:414526","DOID:0070137","MESH:C567855","UMLS:C2751987"],"synonyms":[{"name":"ARCL2, progeroid type","type":"exact"},{"name":"ARCL2B","type":"exact"},{"name":"PYCR1 autosomal recessive cutis laxa type 2","type":"exact"},{"name":"autosomal recessive cutis laxa type 2 caused by mutation in PYCR1","type":"exact"},{"name":"autosomal recessive cutis laxa type 2, progeroid type","type":"exact"},{"name":"autosomal recessive cutis laxa type 2B","type":"exact"},{"name":"autosomal recessive cutis laxa type IIB","type":"related"},{"name":"cutis laxa with progeroid features","type":"related"},{"name":"cutis laxa, autosomal recessive type 2B","type":"related"},{"name":"cutis laxa, autosomal recessive, type 2B","type":"related"},{"name":"cutis laxa, autosomal recessive, type IIB","type":"related"}],"termid":"MONDO:0013051","terms_by_termid":{"MONDO:0013051":null},"xrefs":{"Monarch":{"xref_id":"0013051"}}}


id: PBO:0081426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280D","termid":"PBO:0081426"}


id: GO:0036192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyindolin-2-one + O2 + reduced [NADPH--hemoprotein reductase] = 2-hydroxy-2H-1,4-benzoxazin-3(4H)-one + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxyindolin-2-one monooxygenase activity","secondary_identifiers":["EC:1.14.14.109","KEGG_REACTION:R07422"],"synonyms":[{"name":"3-hydroxyindolin-2-one,NAD(P)H:oxygen oxidoreductase (2-hydroxy-2H-1,4-benzoxazin-3(4H)-one-forming)","type":"related"}],"termid":"GO:0036192"}


id: PBO:0089256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap14","termid":"PBO:0089256"}


id: MONDO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glomerulopathy with fibronectin deposits (obsolete MONDO:0000034)","termid":"MONDO:0000034","xrefs":{"Monarch":{"xref_id":"0000034"}}}


id: PBO:0059002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMACHC pseudogene 1","termid":"PBO:0059002"}


id: GO:0070232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of T cell death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte apoptotic process","termid":"GO:0070228"},{"relation_name":"regulates","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell apoptotic process","synonyms":[{"name":"regulation of T cell apoptosis","type":"narrow"},{"name":"regulation of T lymphocyte apoptosis","type":"exact"},{"name":"regulation of T-cell apoptosis","type":"exact"},{"name":"regulation of T-lymphocyte apoptosis","type":"exact"},{"name":"regulation of programmed cell death of T cells by apoptosis","type":"exact"}],"termid":"GO:0070232"}


id: PBO:0005055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght8 (predicted)","termid":"PBO:0005055"}


id: MONDO:0100238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of Fanconi renotubular syndrome that is inherited.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi renotubular syndrome","termid":"MONDO:0001083"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"inherited Fanconi renotubular syndrome","secondary_identifiers":["OMIMPS:134600"],"synonyms":[{"name":"hereditary Fanconi renotubular syndrome","type":"exact"}],"termid":"MONDO:0100238","xrefs":{"Monarch":{"xref_id":"0100238"}}}


id: PBO:0042605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 5","termid":"PBO:0042605"}


id: PBO:0000417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase (predicted)","termid":"PBO:0000417"}


id: MONDO:1011208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypophosphatasia that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypophosphatasia, non-human animal","termid":"MONDO:1010316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatasia, sheep","secondary_identifiers":["OMIA:002162-9940"],"termid":"MONDO:1011208","xrefs":{"Monarch":{"xref_id":"1011208"}}}


id: MONDO:1012045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar cortical atrophy, non-human animal","termid":"MONDO:1011836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, dog","secondary_identifiers":["OMIA:000177-9615"],"termid":"MONDO:1012045","xrefs":{"Monarch":{"xref_id":"1012045"}}}


id: MONDO:0008953
data:
  {"annotated_genes":["SJAG_02619"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87167],"is_not":false,"summary":null,"term":"MONDO:0008953"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX1 defect","termid":"MONDO:0100259"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02619":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019053","MONDO:0005559","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 1A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648474","DOID:0080476","OMIM:214100","UMLS:C4721541"],"synonyms":[{"name":"Cerebrohepatorenal syndrome","type":"related"},{"name":"PBD1A","type":"related"},{"name":"Zs","type":"related"},{"name":"peroxisome biogenesis disorder 1A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 1","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group E","type":"related"}],"termid":"MONDO:0008953","terms_by_termid":{"MONDO:0008953":null},"xrefs":{"Monarch":{"xref_id":"0008953"}}}


id: PBO:0042859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 77","termid":"PBO:0042859"}


id: PBO:0116992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR55 antisense RNA 1","termid":"PBO:0116992"}


id: FYPO:0005112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin-specific protease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal ubiquitin-specific protease activity","termid":"FYPO:0005111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased ubiquitin-specific protease activity","synonyms":[{"name":"reduced ubiquitin-specific protease activity","type":"exact"}],"termid":"FYPO:0005112"}


id: PBO:0056529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma cell adhesion molecule","termid":"PBO:0056529"}


id: PBO:0084542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; ERP6 has a paralog, ERP1, that arose from the whole genome duplication","termid":"PBO:0084542"}


id: SO:0001218
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that derives from another organism, via the use of recombinant DNA technology.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"transgenic","termid":"SO:0000781"},{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgenic_insertion","synonyms":[{"name":"transgenic insertion","type":"exact"}],"termid":"SO:0001218"}


id: MONDO:0020574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Germ cell tumors of the central nervous system other than germinoma. This category includes teratoma, choriocarcinoma, embryonal carcinoma, and yolk sac tumor.","definition_xrefs":["NCIT:C100093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"},{"relation_name":"is_a","term_name":"extragonadal non-dysgerminomatous germ cell tumor","termid":"MONDO:0020539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system nongerminomatous germ cell tumor","secondary_identifiers":["UMLS:C1696109","MEDGEN:760465"],"synonyms":[{"name":"central nervous system nongerminomatous germ cell tumor","type":"exact"},{"name":"nongerminomatous GCT - CNS","type":"exact"},{"name":"nongerminomatous germ cell tumor of the CNS","type":"exact"},{"name":"nongerminomatous germ cell tumour of the CNS","type":"exact"}],"termid":"MONDO:0020574","xrefs":{"Monarch":{"xref_id":"0020574"}}}


id: PBO:0050872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH2 divergent transcript","termid":"PBO:0050872"}


id: GO:0010142
data:
  {"annotated_genes":["SJAG_04307","SJAG_04568","SJAG_04499","SJAG_00413","SJAG_04865","SJAG_01474","SJAG_03715","SJAG_03349","SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74672,80274,89019,94767,99919,102199,106853,109805,114077,115235],"is_not":false,"summary":null,"term":"GO:0010142"}]},"cv_name":"biological_process","definition":"The pathway that converts acetate, in the form of acetyl-CoA, to farnesyl diphosphate (FPP) through a series of mevalonate intermediates. Farnesyl diphosphate is an important substrate for other essential pathways, such as biosynthesis of sterols.","definition_xrefs":["MetaCyc:PWY-922","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"farnesyl diphosphate biosynthetic process","termid":"GO:0045337"},{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process via mevalonate","termid":"GO:1902767"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00580":null,"SJAG_01474":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"farnesyl diphosphate biosynthetic process, mevalonate pathway","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Ac-MVA pathway","type":"narrow"},{"name":"acetate-mevalonate pathway","type":"narrow"},{"name":"farnesyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"farnesyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"farnesyl diphosphate synthesis, mevalonate pathway","type":"exact"},{"name":"isoprenoid pathway","type":"exact"}],"termid":"GO:0010142","terms_by_termid":{"GO:0010142":null}}


id: PBO:0110263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase peripheral stalk assembly factor Ina22","termid":"PBO:0110263"}


id: GO:1902324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["GOC:kmv","PMID:15340492","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"regulation of methyl-branched fatty acid biosynthetic process","termid":"GO:1902322"},{"relation_name":"positively_regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"positive regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"activation of methyl-branched fatty acid anabolism","type":"narrow"},{"name":"activation of methyl-branched fatty acid biosynthesis","type":"narrow"},{"name":"activation of methyl-branched fatty acid biosynthetic process","type":"narrow"},{"name":"activation of methyl-branched fatty acid formation","type":"narrow"},{"name":"activation of methyl-branched fatty acid synthesis","type":"narrow"},{"name":"positive regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"positive regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"positive regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"positive regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"up regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"up regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"up regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"up regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"up regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"upregulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"upregulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"upregulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"upregulation of methyl-branched fatty acid formation","type":"exact"},{"name":"upregulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902324"}


id: MONDO:0019258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild phenylketonuria is a rare form of phenylketouria (PKU), an inborn error of amino acid metabolism, characterized by symptoms of PKU of mild to moderate severity.","definition_xrefs":["Orphanet:79253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"mild phenylketonuria","secondary_identifiers":["MEDGEN:1842357","GARD:10324","UMLS:C5680203"],"synonyms":[{"name":"mPKU","type":"exact"},{"name":"mild PKU","type":"exact"},{"name":"variant PKU","type":"exact"},{"name":"variant phenylketonuria","type":"exact"}],"termid":"MONDO:0019258","xrefs":{"Monarch":{"xref_id":"0019258"}}}


id: PATO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branchiness quality inhering in a bearer by virtue of the bearer's lacking branches.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiness","termid":"PATO:0002009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbranched","termid":"PATO:0000414"}


id: GO:0048325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"},{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"negatively_regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axial mesodermal cell fate determination","synonyms":[{"name":"down regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"downregulation of axial mesodermal cell fate determination","type":"exact"},{"name":"inhibition of axial mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048325"}


id: MONDO:0017290
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938","SJAG_05194","SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[87360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[87297,87298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[86202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[87236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"An instance of intrahepatic cholestasis that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"intrahepatic cholestasis","termid":"MONDO:0019072"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005066"],"is_obsolete":false,"name":"familial intrahepatic cholestasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:74162007","GARD:21119","Orphanet:284385","ICD9:576.8"],"synonyms":[{"name":"hereditary intrahepatic cholestasis","type":"exact"}],"termid":"MONDO:0017290","terms_by_termid":{"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013995":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0017290"}}}


id: PR:Q9P6K1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle transport protein SFT2C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sft2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1527.02","secondary_identifiers":["UniProtKB:Q9P6K1"],"synonyms":[{"name":"SPAC1527.02","type":"related"},{"name":"Spom972h-SFT2D3","type":"exact"}],"termid":"PR:Q9P6K1"}


id: PBO:0042315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD33 molecule","termid":"PBO:0042315"}


id: PBO:0044068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 12, pseudogene","termid":"PBO:0044068"}


id: MONDO:0009965
data:
  {"annotated_genes":["SJAG_01822","SJAG_03876","SJAG_03132"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85521,85522,85523],"is_not":false,"summary":null,"term":"MONDO:0009965"}]},"cv_name":"mondo","definition":"Perlman syndrome is characterized principally by polyhydramnios, neonatal macrosomia, bilateral renal tumors (hamartomas with or without nephroblastomatosis), hypertrophy of the islets of Langerhans and facial dysmorphism.","definition_xrefs":["Orphanet:2849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01822":null,"SJAG_03132":null,"SJAG_03876":null},"genotype_count":0,"is_obsolete":false,"name":"Perlman syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:162909","DOID:0060476","MESH:C536399","GARD:3936","NCIT:C103144","OMIM:267000","icd11.foundation:795682441","SCTID:722231005","UMLS:C0796113"],"synonyms":[{"name":"PRLMNS","type":"related"},{"name":"Perlman syndrome","type":"exact"},{"name":"nephroblastomatosis - fetal ascites - macrosomia - Wilms tumor","type":"exact"},{"name":"nephroblastomatosis - foetal ascites - macrosomia - Wilms tumour","type":"exact"},{"name":"nephroblastomatosis fetal ascites macrosomia and Wilms tumor","type":"related"},{"name":"nephroblastomatosis foetal ascites macrosomia and Wilms tumour","type":"related"},{"name":"nephroblastomatosis, fetal ascites, macrosomia and Wilms tumor","type":"exact"},{"name":"nephroblastomatosis, fetal ascites, macrosomia, and Wilms tumor","type":"related"},{"name":"nephroblastomatosis, foetal ascites, macrosomia and Wilms tumour","type":"exact"},{"name":"nephroblastomatosis, foetal ascites, macrosomia, and Wilms tumour","type":"related"},{"name":"nephroblastomatosis-fetal ascites-macrosomia-Wilms tumor syndrome","type":"exact"},{"name":"nephroblastomatosis-fetal ascites-macrosomia-Wilms tumour syndrome","type":"exact"},{"name":"renal hamartomas, nephroblastomatosis and fetal gigantism","type":"exact"},{"name":"renal hamartomas, nephroblastomatosis and foetal gigantism","type":"exact"},{"name":"renal hamartomas, nephroblastomatosis, and fetal gigantism","type":"related"},{"name":"renal hamartomas, nephroblastomatosis, and foetal gigantism","type":"related"}],"termid":"MONDO:0009965","terms_by_termid":{"MONDO:0009965":null},"xrefs":{"Monarch":{"xref_id":"0009965"}}}


id: PBO:0088194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcription factor; involved in the complex regulation of gene expression in response to levels of heme and oxygen; localizes to the mitochondrion as well as to the nucleus; the S288C sequence differs from other strain backgrounds due to a Ty1 insertion in the carboxy terminus","termid":"PBO:0088194"}


id: PBO:0027088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity_during_cellular_response_to_adenine_starvation","termid":"PBO:0027088"}


id: FYPO:0001698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to capsazepine. Cells stop growing (and may die) at a concentration of capsazepine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to capsazepine","synonyms":[{"name":"hypersensitive to capsazepine","type":"exact"},{"name":"sensitive to capsazepine during mitotic cell cycle","type":"related"},{"name":"sensitive to capsazepine during vegetative growth","type":"exact"}],"termid":"FYPO:0001698"}


id: PBO:0067539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 684, pseudogene","termid":"PBO:0067539"}


id: PBO:0034815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease association, microcephalic primordial dwarfism","termid":"PBO:0034815"}


id: PBO:0060679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"norrin cystine knot growth factor NDP","termid":"PBO:0060679"}


id: PBO:0003515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm2","termid":"PBO:0003515"}


id: GO:0033311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of chlorophyll a, via the intermediate phytyl diphosphate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll a biosynthetic process","termid":"GO:0033305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll a biosynthetic process via phytyl diphosphate","synonyms":[{"name":"chlorophyll a anabolism via phytyl diphosphate","type":"exact"},{"name":"chlorophyll a biosynthesis via phytyl diphosphate","type":"exact"},{"name":"chlorophyll a biosynthetic process via phytyl-PP","type":"exact"},{"name":"chlorophyll a formation via phytyl chlorophyll a formation via phytyl-PP","type":"exact"},{"name":"chlorophyll a synthesis via phytyl diphosphate","type":"exact"}],"termid":"GO:0033311"}


id: GO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type III hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type III hypersensitivity","termid":"GO:0001803"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"negatively_regulates","term_name":"type III hypersensitivity","termid":"GO:0001802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type III hypersensitivity","synonyms":[{"name":"down regulation of type III hypersensitivity","type":"exact"},{"name":"down-regulation of type III hypersensitivity","type":"exact"},{"name":"downregulation of type III hypersensitivity","type":"exact"},{"name":"inhibition of type III hypersensitivity","type":"narrow"}],"termid":"GO:0001804"}


id: MONDO:0030035
data:
  {"annotated_genes":["SJAG_01942","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85732,85733],"is_not":false,"summary":null,"term":"MONDO:0030035"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, developmental delay, and episodic neurologic regression syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618877","UMLS:C5394367","MEDGEN:1719567"],"synonyms":[{"name":"LEUDEN","type":"exact"},{"name":"LEUKOENCEPHALOPATHY, DEVELOPMENTAL DELAY, AND EPISODIC NEUROLOGIC REGRESSION SYNDROME","type":"exact"},{"name":"Leuden Syndrome","type":"exact"},{"name":"leukoencephalopathy, developmental delay, and episodic neurologic regression syndrome","type":"exact"}],"termid":"MONDO:0030035","terms_by_termid":{"MONDO:0030035":null},"xrefs":{"Monarch":{"xref_id":"0030035"}}}


id: PBO:0086518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; null mutant displays increased levels of spontaneous Rad52 foci","termid":"PBO:0086518"}


id: PBO:0084313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isopropylmalate isomerase; catalyzes the second step in the leucine biosynthesis pathway","termid":"PBO:0084313"}


id: GO:0075270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of aecium development","termid":"GO:0075268"},{"relation_name":"negatively_regulates","term_name":"aecium development","termid":"GO:0075267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aecium development","termid":"GO:0075270"}


id: GO:0008257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + protein L-histidine = ADP + protein N(tau)-phospho-L-histidine.","definition_xrefs":["EC:2.7.13.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0004672","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein histidine tele-kinase activity","secondary_identifiers":["MetaCyc:2.7.13.2-RXN","RHEA:11860"],"synonyms":[{"name":"ATP:protein-L-histidine N-tele-phosphotransferase activity","type":"related"},{"name":"ATP:protein-L-histidine Ntau-phosphotransferase activity","type":"related"},{"name":"protein-histidine tele-kinase activity","type":"exact"}],"termid":"GO:0008257"}


id: GO:0009232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["GOC:jl","PMID:10961912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin metabolic process","termid":"GO:0006771"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"riboflavin catabolic process","synonyms":[{"name":"riboflavin breakdown","type":"exact"},{"name":"riboflavin catabolism","type":"exact"},{"name":"riboflavin degradation","type":"exact"},{"name":"vitamin B2 catabolic process","type":"exact"},{"name":"vitamin B2 catabolism","type":"exact"},{"name":"vitamin G catabolic process","type":"exact"},{"name":"vitamin G catabolism","type":"exact"}],"termid":"GO:0009232"}


id: GO:0030244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose metabolic process","termid":"GO:0030243"},{"relation_name":"is_a","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellulose biosynthetic process","secondary_identifiers":["GO:0016178","MetaCyc:PWY-1001"],"synonyms":[{"name":"cellulose anabolism","type":"exact"},{"name":"cellulose biosynthesis","type":"exact"},{"name":"cellulose formation","type":"exact"},{"name":"cellulose synthesis","type":"exact"}],"termid":"GO:0030244"}


id: GO:0045456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"ecdysteroid biosynthetic process","synonyms":[{"name":"ecdysteroid anabolism","type":"exact"},{"name":"ecdysteroid biosynthesis","type":"exact"},{"name":"ecdysteroid formation","type":"exact"},{"name":"ecdysteroid synthesis","type":"exact"}],"termid":"GO:0045456"}


id: MONDO:0008279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial adenomatous polyposis type 1 (obsolete MONDO:0008279)","termid":"MONDO:0008279","xrefs":{"Monarch":{"xref_id":"0008279"}}}


id: MONDO:0018424
data:
  {"annotated_genes":["SJAG_01164","SJAG_02007","SJAG_03553","SJAG_03290","SJAG_01417","SJAG_04016","SJAG_03701","SJAG_02397","SJAG_03222","SJAG_03641","SJAG_02306","SJAG_01147"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[86970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[85770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014576"},{"annotations":[85472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[85998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[86348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[85618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[85684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[86326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[86671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"},{"annotations":[85539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"},{"annotations":[86126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of lipoate biosynthetic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"inherited fatty acid metabolism disorder","termid":"MONDO:0037858"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"},{"relation_name":"is_a","term_name":"sulfur metabolism disease","termid":"MONDO:0056803"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01147":null,"SJAG_01164":null,"SJAG_01417":null,"SJAG_02007":null,"SJAG_02306":null,"SJAG_02397":null,"SJAG_03222":null,"SJAG_03290":null,"SJAG_03553":null,"SJAG_03641":null,"SJAG_03701":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"inherited lipoic acid biosynthesis defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843250","Orphanet:401854","UMLS:C5680006","GARD:12679"],"synonyms":[{"name":"inborn error of lipoate biosynthetic process","type":"exact"},{"name":"inborn lipoate biosynthetic process disorder","type":"exact"},{"name":"lipoate biosynthesis defect","type":"exact"},{"name":"lipoic acid biosynthesis defect","type":"related"},{"name":"lipoic acid biosynthesis defects","type":"related"},{"name":"rare inborn error of lipoate biosynthetic process","type":"exact"}],"termid":"MONDO:0018424","terms_by_termid":{"MONDO:0009529":null,"MONDO:0011582":null,"MONDO:0013675":null,"MONDO:0013762":null,"MONDO:0014132":null,"MONDO:0014576":null,"MONDO:0014611":null,"MONDO:0014803":null,"MONDO:0015003":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0957382":null},"xrefs":{"Monarch":{"xref_id":"0018424"}}}


id: GO:1905310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","PMID:17628518","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:1905310"}


id: PBO:0067797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 99","termid":"PBO:0067797"}


id: PBO:0036199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_in_chromatin","termid":"PBO:0036199"}


id: PR:O74765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03227","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.03","secondary_identifiers":["UniProtKB:O74765"],"synonyms":[{"name":"ProRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PARS2","type":"exact"},{"name":"prolyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74765"}


id: MONDO:0033352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002320"],"is_obsolete":false,"name":"neuropathy, congenital hypomelinating","secondary_identifiers":["OMIMPS:605253","UMLS:C0393818","MEDGEN:97965"],"synonyms":[{"name":"CHN","type":"exact"}],"termid":"MONDO:0033352","xrefs":{"Monarch":{"xref_id":"0033352"}}}


id: GO:0031620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of fever generation.","definition_xrefs":["GOC:add","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of heat generation","termid":"GO:0031650"},{"relation_name":"regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fever generation","synonyms":[{"name":"regulation of pyrexia","type":"exact"}],"termid":"GO:0031620"}


id: PBO:0078383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation regulatory long non-coding RNA 1","termid":"PBO:0078383"}


id: PBO:0085059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi","termid":"PBO:0085059"}


id: GO:0004133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of branch points in branched glycogen polymers.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glycogen debranching enzyme activity (obsolete GO:0004133)","termid":"GO:0004133"}


id: FYPO:0005892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of an RNA catabolic process is increased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA catabolic process","termid":"FYPO:0003553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA catabolic process during nitrogen starvation","synonyms":[{"name":"increased RNA breakdown during nitrogen starvation","type":"exact"},{"name":"increased RNA catabolic process during nitrogen depletion","type":"exact"},{"name":"increased RNA catabolic process during nitrogen deprivation","type":"related"},{"name":"increased RNA catabolism during nitrogen starvation","type":"exact"},{"name":"increased RNA degradation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005892"}


id: MONDO:0013486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 32 (SCA32) is a subtype of autosomal dominant cerebellar ataxia type 1 (ADCA type 1) characterized by ataxia, cognitive impairment and azoospermia in males.","definition_xrefs":["Orphanet:276183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 32","secondary_identifiers":["icd11.foundation:1372046516","GARD:17276","OMIM:613909","SCTID:719254001","MEDGEN:462693","UMLS:C3151343"],"synonyms":[{"name":"SCA32","type":"exact"},{"name":"cerebellar ataxia with azoospermia and intellectual disability","type":"exact"},{"name":"spinocerebellar ataxia 32","type":"related"}],"termid":"MONDO:0013486","xrefs":{"Monarch":{"xref_id":"0013486"}}}


id: FYPO:0000737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle assembly","termid":"FYPO:0000119"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal meiotic spindle assembly","synonyms":[{"name":"abnormal spindle assembly involved in meiosis","type":"exact"}],"termid":"FYPO:0000737"}


id: PBO:0080651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 G2 checkpoint kinase","termid":"PBO:0080651"}


id: PBO:0082240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of chaperonin-containing T-complex; complex mediates protein folding in the cytosol; involved in actin cytoskeleton maintenance; overexpression in neurons suppresses formation of pathogenic conformations of huntingtin protein","termid":"PBO:0082240"}


id: GO:0007270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of synaptic transmission from a neuron to another neuron across a synapse.","definition_xrefs":["GOC:add","GOC:dos","GOC:jl","MeSH:D009435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuron-neuron synaptic transmission","synonyms":[{"name":"nerve-nerve synaptic transmission","type":"related"}],"termid":"GO:0007270"}


id: PBO:0062056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 3","termid":"PBO:0062056"}


id: MONDO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anxiety disorder characterized by an intense, irrational fear of venturing out into open places or situations in which help (or escape) might not be available should excessive anxiety or panic symptoms develop.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phobic disorder","termid":"MONDO:0003699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agoraphobia","secondary_identifiers":["SCTID:70691001","MESH:D000379","icd11.foundation:530592394","UMLS:C0001818","MEDGEN:175","DOID:593","NCIT:C34362","ICD10CM:F40.0","EFO:1001872"],"synonyms":[{"name":"fear of open spaces","type":"exact"},{"name":"fear of open spaces (finding)","type":"exact"}],"termid":"MONDO:0003709","xrefs":{"Monarch":{"xref_id":"0003709"}}}


id: GO:1902177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:11672522","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902175"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"positive regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902177"}


id: GO:0071099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta6 integrin complex bound to transforming growth factor beta-3 (TGFbeta-3).","definition_xrefs":["PMID:11821050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alphaV-beta6 integrin-TGFbeta-3 complex","synonyms":[{"name":"ITGAV-ITGB6-TFGB3 complex","type":"narrow"}],"termid":"GO:0071099"}


id: GO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of the IgM isotype.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IgM binding","termid":"GO:0001791"}


id: PBO:0078115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 4","termid":"PBO:0078115"}


id: GO:0019806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R-H + 2 bromide + H2O2 = 2 R-Br + 2 H2O. Enzymes with this activity often accept other halide ions as substrates, including chloride and iodide.","definition_xrefs":["EC:1.11.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"haloperoxidase activity","termid":"GO:0140905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"bromide peroxidase activity","synonyms":[{"name":"bromoperoxidase activity","type":"exact"}],"termid":"GO:0019806"}


id: PR:Q96TL7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rap1 gene.","definition_xrefs":["UniProtKB:Q96TL7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein rap1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.02","synonyms":[{"name":"Spom972h-rap1","type":"exact"}],"termid":"PR:Q96TL7"}


id: GO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external part of the host cell wall and/or host plasma membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell surface","termid":"GO:0044228"}


id: SO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from apicoplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"apicoplast_sequence","termid":"SO:0000743"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apicoplast_gene","synonyms":[{"name":"apicoplast gene","type":"exact"}],"termid":"SO:0000091"}


id: GO:1905542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-arginine import across plasma membrane.","definition_xrefs":["PMID:14718525","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-arginine import across plasma membrane","termid":"GO:1905541"},{"relation_name":"negatively_regulates","term_name":"L-arginine import across plasma membrane","termid":"GO:0097638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of L-arginine import across plasma membrane","secondary_identifiers":["GO:1902827"],"synonyms":[{"name":"down regulation of L-arginine import into cell","type":"exact"},{"name":"downregulation of L-arginine import into cell","type":"exact"},{"name":"inhibition of L-arginine import into cell","type":"narrow"},{"name":"negative regulation of L-arginine import into cell","type":"exact"}],"termid":"GO:1905542"}


id: GO:0030023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A component of the extracellular matrix that enables the matrix to recoil after transient stretching.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"},{"relation_name":"is_a","term_name":"structural molecule activity conferring elasticity","termid":"GO:0097493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix constituent conferring elasticity","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"},{"name":"elastin","type":"related"}],"termid":"GO:0030023"}


id: GO:1902275
data:
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id: MONDO:0037860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare systemic or rheumatologic disease (obsolete MONDO:0037860)","secondary_identifiers":["Orphanet:98023"],"termid":"MONDO:0037860","xrefs":{"Monarch":{"xref_id":"0037860"}}}


id: PBO:0113218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Moonlighting protein component of both the ERMES and SAM complex; subunit of the ERMES complex that acts as a molecular tether between the mitochondria and the ER, necessary for both efficient phospholipid exchange between organelles and for mitophagy; SAM/TOB complex subunit that functions in the assembly of outer membrane beta-barrel proteins; involved in mitochondrial inheritance and morphology; ERMES complex often co-localizes with peroxisomes adjacent to mitochondria-ER junctions","termid":"PBO:0113218"}


id: PBO:0038917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5 pseudogene 1","termid":"PBO:0038917"}


id: PBO:0088837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex kleisin subunit Rad21","termid":"PBO:0088837"}


id: PBO:0004303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc1 (predicted)","termid":"PBO:0004303"}


id: PBO:0040572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 6","termid":"PBO:0040572"}


id: GO:1990246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A calcium channel complex in the mitochondrial inner membrane capable of highly-selective calcium channel activity. Its components include the EF-hand-containing proteins mitochondrial calcium uptake 1 (MICU1) and MICU2, the pore-forming subunit mitochondrial calcium uniporter (MCU) and its paralog MCUb, and the MCU regulator EMRE.","definition_xrefs":["PMID:24231807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel complex","termid":"GO:0034704"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"uniplex complex","synonyms":[{"name":"mitochondrial uniporter complex","type":"exact"},{"name":"mitochondrial uniporter holocomplex","type":"exact"}],"termid":"GO:1990246"}


id: PBO:0053052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 3","termid":"PBO:0053052"}


id: PBO:0089664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh4","termid":"PBO:0089664"}


id: SO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The hAT terminal inverted repeat transposon superfamily elements were first found in maize (the Ac/Ds elements). Members of the hAT superfamily have TSDs of 8 bp, relatively short TIRs of 5–27 bp and overall lengths of less than 4 kb.","definition_xrefs":["PMID:11454746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hAT_TIR_transposon","synonyms":[{"name":"Ac transposon","type":"exact"},{"name":"Ac/Ds transposon","type":"exact"},{"name":"DTA transposon","type":"exact"},{"name":"Ds transposon","type":"exact"},{"name":"hAT TIR transposon","type":"exact"},{"name":"hAT transposon","type":"exact"},{"name":"hAT-Ac transposon","type":"exact"}],"termid":"SO:0002279"}


id: GO:0030465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete autophagic death (sensu Fungi) (obsolete GO:0030465)","synonyms":[{"name":"autophagic death (sensu Fungi)","type":"exact"}],"termid":"GO:0030465"}


id: MONDO:0011250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, macrotia, and intellectual disability","secondary_identifiers":["MEDGEN:355403","OMIM:602555","MESH:C566525","UMLS:C1865204"],"synonyms":[{"name":"microcephaly, macrotia, and intellectual disability","type":"exact"},{"name":"microcephaly, macrotia, and mental retardation","type":"exact"}],"termid":"MONDO:0011250","xrefs":{"Monarch":{"xref_id":"0011250"}}}


id: GO:0018451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ethene oxide + NAD+ + CoA-SH = NADH + H+ + acetyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete epoxide dehydrogenase activity (obsolete GO:0018451)","termid":"GO:0018451"}


id: GO:0016758
data:
  {"annotated_genes":["SJAG_03555","SJAG_03311","SJAG_03066","SJAG_01972","SJAG_02519","SJAG_04868","SJAG_03015","SJAG_02913","SJAG_03587","SJAG_01491","SJAG_04821","SJAG_04906","SJAG_00295","SJAG_01427","SJAG_03878","SJAG_03082","SJAG_05285","SJAG_01028","SJAG_00394","SJAG_02804","SJAG_03953","SJAG_00334","SJAG_03150","SJAG_01264","SJAG_00129","SJAG_04184","SJAG_03115","SJAG_00598","SJAG_04770","SJAG_02916","SJAG_00506","SJAG_04401","SJAG_03790","SJAG_00747","SJAG_05327","SJAG_02222","SJAG_04952","SJAG_03764","SJAG_04119","SJAG_04881","SJAG_03056","SJAG_02102","SJAG_00816","SJAG_00442","SJAG_00183","SJAG_04095","SJAG_01276","SJAG_02168","SJAG_06383","SJAG_04236","SJAG_04316","SJAG_03057","SJAG_04127","SJAG_03149","SJAG_03656","SJAG_00876","SJAG_01531","SJAG_01288","SJAG_03871","SJAG_01021","SJAG_00437","SJAG_02903","SJAG_04053","SJAG_04878","SJAG_04571","SJAG_02996","SJAG_01950"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76204,75040,113495,80368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[79278,93674,101382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[99104,99105,118385,99245,99103,99106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031278"},{"annotations":[75299,77400,77951,75865,79678,74899,78359,75127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000026"},{"annotations":[111036,111042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001962"},{"annotations":[71795,70973,73919,78987,73737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047657"},{"annotations":[118121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033840"},{"annotations":[72409,80754,70287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000009"},{"annotations":[116151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[74780,74605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004100"},{"annotations":[68119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004578"},{"annotations":[76912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052925"},{"annotations":[62764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052926"},{"annotations":[62763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052918"},{"annotations":[80337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042283"},{"annotations":[69407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106073"},{"annotations":[77548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042281"},{"annotations":[76554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004579"},{"annotations":[61296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052917"},{"annotations":[58720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004582"},{"annotations":[67068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[70205,75114,77544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004169"},{"annotations":[106094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"},{"annotations":[60906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004378"},{"annotations":[60905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102704"},{"annotations":[77054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004377"},{"annotations":[103362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180041"},{"annotations":[91549,87824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033164"},{"annotations":[97827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045140"},{"annotations":[76587],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070917"},{"annotations":[96054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0103064"},{"annotations":[95578,75845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000030"},{"annotations":[63583,99003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004577"},{"annotations":[117567,108908,77811,93414,111930,93323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017176"},{"annotations":[79894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor).","definition_xrefs":["EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase 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id: PBO:0075863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 3","termid":"PBO:0075863"}


id: PBO:0087859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator involved in maintenance of ion homeostasis; also involved in protection against DNA damage caused by bleomycin and other oxidants; contains a C-terminal leucine-rich repeat","termid":"PBO:0087859"}


id: PBO:0005662
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Thi1","termid":"PBO:0005662"}


id: GO:0004698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Calcium-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction is activated in the presence of diacylglycerol and calcium.","definition_xrefs":["PMID:34834162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diacylglycerol-dependent serine/threonine kinase activity","termid":"GO:0004697"},{"relation_name":"is_a","term_name":"calcium-dependent protein serine/threonine kinase activity","termid":"GO:0009931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0004672","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"calcium,diacylglycerol-dependent serine/threonine kinase activity","secondary_identifiers":["Reactome:R-HSA-421007","Reactome:R-HSA-8986937","Reactome:R-HSA-114683","Reactome:R-HSA-114684","Reactome:R-HSA-416639","Reactome:R-HSA-9005561"],"synonyms":[{"name":"calcium-dependent PKC activity","type":"exact"},{"name":"conventional protein kinase C activity","type":"exact"}],"termid":"GO:0004698"}


id: GO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction directed at self antigens.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction to self antigen","termid":"GO:0002513"}


id: PBO:0005336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase","termid":"PBO:0005336"}


id: PR:O13805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A graves disease carrier protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00827","PANTHER:PTHR24089:SF104","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C17H9.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.08","secondary_identifiers":["UniProtKB:O13805"],"synonyms":[{"name":"Spom972h-SLC25A16","type":"exact"}],"termid":"PR:O13805"}


id: FYPO:0008082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagy is abnormal. Autophagy is the pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["PMID:35406650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal autophagy","termid":"FYPO:0008082"}


id: PR:O94270
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ER lumen protein-retaining receptor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lumen protein-retaining receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.22","secondary_identifiers":["UniProtKB:O94270"],"synonyms":[{"name":"SPBP8B7.22","type":"related"},{"name":"Spom972h-KDELR1","type":"exact"}],"termid":"PR:O94270"}


id: PR:O14038
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein cornichon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01768","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2C4.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.05","secondary_identifiers":["UniProtKB:O14038"],"synonyms":[{"name":"Spom972h-CNIH1","type":"exact"}],"termid":"PR:O14038"}


id: GO:0044477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts platelet aggregation in another organism via the action of a venom.","definition_xrefs":["GOC:fj","PMID:37818211","PMID:28435120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of hemostasis","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated suppression of platelet aggregation","synonyms":[{"name":"envenomation resulting in negative regulation of platelet aggregation in another organism","type":"exact"},{"name":"envenomation resulting in negative regulation of platelet aggregation in other organism","type":"exact"},{"name":"envenomation suppressing platelet aggregation","type":"exact"},{"name":"venom-mediated suppression of platelet agglutination","type":"related"}],"termid":"GO:0044477"}


id: PBO:0016553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85b (predicted)","termid":"PBO:0016553"}


id: GO:0071783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER) cisternal network. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.","definition_xrefs":["PMID:16469703","GOC:vw","PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network organization","synonyms":[{"name":"ER cisternal network organisation","type":"exact"},{"name":"ER cisternal network organization","type":"exact"},{"name":"endoplasmic reticulum cisternal network organisation","type":"exact"}],"termid":"GO:0071783"}


id: GO:0046102
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"inosine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"inosine metabolism","type":"exact"}],"termid":"GO:0046102","terms_by_termid":{"GO:0006190":null}}


id: PBO:0000729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-saccharopine oxidase","termid":"PBO:0000729"}


id: PBO:0075014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-25","termid":"PBO:0075014"}


id: PBO:0073377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sestrin 1","termid":"PBO:0073377"}


id: PBO:0057115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR200C and MIR141 host gene","termid":"PBO:0057115"}


id: GO:0070972
data:
  {"annotated_genes":["SJAG_02354","SJAG_03955","SJAG_03396","SJAG_00284","SJAG_01750","SJAG_00064","SJAG_03315","SJAG_03411","SJAG_03737","SJAG_01558","SJAG_00959","SJAG_01840","SJAG_01759","SJAG_02867","SJAG_01282","SJAG_02208","SJAG_04129","SJAG_00360","SJAG_03244","SJAG_01001","SJAG_01496","SJAG_03684","SJAG_00175","SJAG_02330","SJAG_02588","SJAG_01782","SJAG_02456","SJAG_00603"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70257,79844,109660,96058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[73500,80601,97656,98372,108631],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[78541,71287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070973"},{"annotations":[92453],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006621"},{"annotations":[70015,98734,112890,69483,87961,98685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045047"},{"annotations":[94603,69273,70256,66556,73319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[114698,115462,91953],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[98374,73515,74010,108633,102903,75748],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00284":null,"SJAG_00360":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01001":null,"SJAG_01282":null,"SJAG_01496":null,"SJAG_01558":null,"SJAG_01750":null,"SJAG_01759":null,"SJAG_01782":null,"SJAG_01840":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02456":null,"SJAG_02588":null,"SJAG_02867":null,"SJAG_03244":null,"SJAG_03315":null,"SJAG_03396":null,"SJAG_03411":null,"SJAG_03684":null,"SJAG_03737":null,"SJAG_03955":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in endoplasmic reticulum","type":"exact"},{"name":"protein localization in ER","type":"exact"},{"name":"protein localization in endoplasmic reticulum","type":"exact"}],"termid":"GO:0070972","terms_by_termid":{"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0006621":null,"GO:0031204":null,"GO:0045047":null,"GO:0070973":null}}


id: MONDO:0005767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe condition resulting from bacteria invading healthy muscle from adjacent traumatized muscle or soft tissue. The infection originates in a wound contaminated with bacteria of the genus clostridium. C. perfringens accounts for the majority of cases (over eighty percent), while C. noyvi, C. septicum, and C. histolyticum cause most of the other cases.","definition_xrefs":["MESH:D005738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"bacterial infectious disease with sepsis","termid":"MONDO:0005229"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"infection due to clostridium perfringens","termid":"MONDO:0023149"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gas gangrene","secondary_identifiers":["MEDGEN:8959","ICD10CM:A48.0","DOID:9159","EFO:0007279","UMLS:C0017105","SCTID:80466000","ICD9:040.0","icd11.foundation:1920227791"],"synonyms":[{"name":"gas bacillus infection","type":"exact"},{"name":"gas gangrene","type":"exact"},{"name":"myonecrosis","type":"exact"}],"termid":"MONDO:0005767","xrefs":{"Monarch":{"xref_id":"0005767"}}}


id: PBO:0017666
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Capping enzyme Triphosphatase","termid":"PBO:0017666"}


id: PBO:0054041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1377","termid":"PBO:0054041"}


id: GO:0044405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The set of specific processes that allow an organism to detect the presence of its host via physical or chemical signals. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of host (obsolete GO:0044405)","synonyms":[{"name":"recognition of host","type":"exact"}],"termid":"GO:0044405"}


id: GO:0048336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"is_a","term_name":"positive regulation of cell fate determination","termid":"GO:1905935"},{"relation_name":"positively_regulates","term_name":"mesodermal cell fate determination","termid":"GO:0007500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesodermal cell fate determination","synonyms":[{"name":"activation of mesodermal cell fate determination","type":"narrow"},{"name":"stimulation of mesodermal cell fate determination","type":"narrow"},{"name":"up regulation of mesodermal cell fate determination","type":"exact"},{"name":"up-regulation of mesodermal cell fate determination","type":"exact"},{"name":"upregulation of mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048336"}


id: MONDO:0016333
data:
  {"annotated_genes":["SJAG_02611","SJAG_03145","SJAG_01139","SJAG_02431","SJAG_04621","SJAG_03815","SJAG_01754","SJAG_01671","SJAG_03703","SJAG_MIT15","SJAG_02919","SJAG_01322","SJAG_01240","SJAG_04567","SJAG_04231","SJAG_MIT13","SJAG_01209","SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032592"},{"annotations":[86879,86878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030300"},{"annotations":[85881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859358"},{"annotations":[86696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957545"},{"annotations":[86207,86208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[86516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012808"},{"annotations":[86787,86786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013198"},{"annotations":[87362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013339"},{"annotations":[85474,85475,85473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014073"},{"annotations":[86496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[86498,86497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"},{"annotations":[86013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012556"},{"annotations":[85875,85874,85873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010788"},{"annotations":[87517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013968"}]},"cv_name":"mondo","definition":"A a genetic form of heart disease that occurs when heart (cardiac) muscle becomes thin and weakened in at least one chamber of the heart, causing the open area of the chamber to become enlarged (dilated). As a result, the heart is unable to pump blood as efficiently as usual. To compensate, the heart attempts to increase the amount of blood being pumped through the heart, leading to further thinning and weakening of the cardiac muscle. Over time, this condition results in heart failure.","direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy","termid":"MONDO:0005021"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":18,"genes_by_uniquename":{"SJAG_01139":null,"SJAG_01209":null,"SJAG_01240":null,"SJAG_01322":null,"SJAG_01671":null,"SJAG_01754":null,"SJAG_02431":null,"SJAG_02611":null,"SJAG_02919":null,"SJAG_03145":null,"SJAG_03703":null,"SJAG_03815":null,"SJAG_04231":null,"SJAG_04567":null,"SJAG_04621":null,"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial dilated cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536231","Orphanet:217607","MEDGEN:90951","UMLS:C0340427","OMIMPS:115200","GARD:20525"],"synonyms":[{"name":"DCM","type":"related"},{"name":"dilated cardiomyopathy, familial","type":"related"},{"name":"hereditary dilated cardiomyopathy","type":"exact"},{"name":"hypokinetic dilated cardiomyopathy, familial","type":"related"},{"name":"idiopathic dilated cardiomyopathy","type":"related"}],"termid":"MONDO:0016333","terms_by_termid":{"MONDO:0008409":null,"MONDO:0010788":null,"MONDO:0012556":null,"MONDO:0012808":null,"MONDO:0013198":null,"MONDO:0013261":null,"MONDO:0013262":null,"MONDO:0013339":null,"MONDO:0013968":null,"MONDO:0014073":null,"MONDO:0030300":null,"MONDO:0032592":null,"MONDO:0859358":null,"MONDO:0957545":null},"xrefs":{"Monarch":{"xref_id":"0016333"}}}


id: PBO:0042522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 2","termid":"PBO:0042522"}


id: FYPO:0006309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is greater than normal at promoters containing FLEX elements. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:26804917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning at stress response genes","termid":"FYPO:0003812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased nucleosome occupancy at FLEX element","synonyms":[{"name":"increased nucleosome occupancy at FLEX element during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at FLEX element during vegetative growth","type":"exact"}],"termid":"FYPO:0006309"}


id: GO:0000041
data:
  {"annotated_genes":["SJAG_02399","SJAG_00222","SJAG_01078","SJAG_01119","SJAG_04743","SJAG_03231","SJAG_00328","SJAG_03667","SJAG_01803","SJAG_00547","SJAG_01007","SJAG_04185","SJAG_03497","SJAG_03850","SJAG_02735","SJAG_03079","SJAG_02473","SJAG_02457","SJAG_04096","SJAG_02834","SJAG_04830","SJAG_01990","SJAG_04677","SJAG_04246","SJAG_04867","SJAG_04737","SJAG_04260","SJAG_04675","SJAG_03528","SJAG_01493","SJAG_02968"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[64333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070574"},{"annotations":[108169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[78994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015677"},{"annotations":[114921,88258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[101804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"},{"annotations":[62118,104103,104944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035434"},{"annotations":[105033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006825"},{"annotations":[104104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[70557,114122,98402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[113543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[76151,61543,78240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[89596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[64332,71152,108990,61544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071421"},{"annotations":[80272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[92773,78002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[62136,69508,62032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[62137,69509,62033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[114672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[104492,113544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[94095,94096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[104629,75072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"},{"annotations":[78641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071577"}]},"cv_name":"biological_process","definition":"The directed movement of transition metal ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_00547":null,"SJAG_01007":null,"SJAG_01078":null,"SJAG_01119":null,"SJAG_01493":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02968":null,"SJAG_03079":null,"SJAG_03231":null,"SJAG_03497":null,"SJAG_03528":null,"SJAG_03667":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04185":null,"SJAG_04246":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04737":null,"SJAG_04743":null,"SJAG_04830":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"transition metal ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"transition metal transport","type":"exact"}],"termid":"GO:0000041","terms_by_termid":{"GO:0006825":null,"GO:0015677":null,"GO:0033212":null,"GO:0033214":null,"GO:0033215":null,"GO:0034755":null,"GO:0035434":null,"GO:0036249":null,"GO:0044718":null,"GO:0048250":null,"GO:0060003":null,"GO:0070574":null,"GO:0071421":null,"GO:0071577":null,"GO:0071578":null,"GO:0097430":null,"GO:0098705":null,"GO:0098711":null,"GO:0098716":null,"GO:0140147":null,"GO:0140209":null,"GO:0140466":null,"GO:1904257":null}}


id: GO:0046337
data:
  {"annotated_genes":["SJAG_01233","SJAG_04628","SJAG_04319","SJAG_03524","SJAG_02980","SJAG_02902","SJAG_01918","SJAG_04792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67426,75710,71375,93386,104294,79471,73884,62175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006646"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine. It is a major structural phospholipid in mammalian systems. It tends to be more abundant than phosphatidylcholine in the internal membranes of the cell and is an abundant component of prokaryotic membranes.","definition_xrefs":["GOC:curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01233":null,"SJAG_01918":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null,"SJAG_04319":null,"SJAG_04628":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylethanolamine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylethanolamine metabolism","type":"exact"}],"termid":"GO:0046337","terms_by_termid":{"GO:0006646":null}}


id: PBO:0060813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nebulin","termid":"PBO:0060813"}


id: PR:Q9C0X7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB8E5.08 gene.","definition_xrefs":["UniProtKB:Q9C0X7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB8E5.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.08","synonyms":[{"name":"Spom972h-SPAPB8E5.08","type":"exact"}],"termid":"PR:Q9C0X7"}


id: MONDO:0005064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious meningitis (obsolete MONDO:0005064)","termid":"MONDO:0005064","xrefs":{"Monarch":{"xref_id":"0005064"}}}


id: MONDO:0009402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare syndrome associating an acro-fronto-facio-nasal dysostosis with genitourinary anomalies.","definition_xrefs":["Orphanet:2211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"acrofrontofacionasal dysostosis","termid":"MONDO:0008715"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrofrontofacionasal dysostosis 2","secondary_identifiers":["UMLS:C1855904","MESH:C538332","OMIM:239710","MEDGEN:383797","GARD:287","SCTID:721835008"],"synonyms":[{"name":"AFFN dysostosis 2","type":"related"},{"name":"Naguib syndrome","type":"related"},{"name":"Naguib-Richieri-Costa syndrome","type":"exact"},{"name":"acrofrontofacionasal dysostosis 2","type":"exact"},{"name":"acrofrontofacionasal dysostosis type 2","type":"exact"},{"name":"acrofrontofacionasal dysostosis with genitourinary anomalies","type":"related"},{"name":"acrofrontofacionasal dysostosis, severe","type":"related"},{"name":"acrofrontofacionasal syndrome type 2","type":"exact"},{"name":"hypertelorism hypospadias polysyndactyly syndrome","type":"related"},{"name":"hypertelorism, hypospadias, and polysyndactyly syndrome","type":"related"},{"name":"hypertelorism-hypospadias-polysyndactyly syndrome","type":"exact"}],"termid":"MONDO:0009402","xrefs":{"Monarch":{"xref_id":"0009402"}}}


id: PBO:0072341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 27","termid":"PBO:0072341"}


id: GO:0018866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving adamantanone, tricyclo(3.3.1.13,7)decanone, a white crystalline solid used as an intermediate for microelectronics in the production of photoresists.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adamantanone metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ada"],"synonyms":[{"name":"adamantanone metabolism","type":"exact"}],"termid":"GO:0018866"}


id: PBO:0043698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 4","termid":"PBO:0043698"}


id: PBO:0065757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pygopus family PHD finger 2","termid":"PBO:0065757"}


id: GO:0141152
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62938,69550],"is_not":false,"summary":null,"term":"GO:0141152"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H+ + NADH.","definition_xrefs":["RHEA:11092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:1.1.1.8","MetaCyc:1.1.1.8-RXN","KEGG_REACTION:R00842"],"synonyms":[{"name":"L-alpha-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-alpha-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"NAD-L-glycerol-3-phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-alpha-glycerophosphate dehydrogenase activity","type":"exact"},{"name":"NAD-dependent glycerol phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-dependent glycerol-3-phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-linked glycerol 3-phosphate dehydrogenase activity","type":"exact"},{"name":"NADH-dihydroxyacetone phosphate reductase activity","type":"exact"},{"name":"alpha-glycerol phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"alpha-glycerophosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol 1-phosphate dehydrogenase activity","type":"broad"},{"name":"glycerol phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase [NAD+] activity","type":"exact"},{"name":"glycerophosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"hydroglycerophosphate dehydrogenase activity","type":"broad"}],"termid":"GO:0141152","terms_by_termid":{"GO:0141152":null}}


id: GO:0019777
data:
  {"annotated_genes":["SJAG_01251"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061651"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ATG12 from one protein to another via the reaction X-ATG12 + Y = Y-ATG12 + X, where both X-ATG12 and Y-ATG12 are covalent linkages.","definition_xrefs":["GOC:mah","PMID:12826404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01251":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0140096","GO:0019787","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"Atg12 transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5681999"],"synonyms":[{"name":"APG12 conjugating enzyme activity","type":"narrow"},{"name":"APG12 ligase activity","type":"narrow"},{"name":"Atg12 conjugating enzyme activity","type":"narrow"},{"name":"Atg12 ligase activity","type":"narrow"}],"termid":"GO:0019777","terms_by_termid":{"GO:0061651":null}}


id: PBO:0028919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription","termid":"PBO:0028919"}


id: PBO:0065323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 46, pseudogene","termid":"PBO:0065323"}


id: PomGeneEx:0000019
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at a lower level under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased","termid":"PomGeneEx:0000003"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level decreased","synonyms":[{"name":"decreased protein level","type":"exact"},{"name":"protein expression decreased","type":"exact"}],"termid":"PomGeneEx:0000019"}


id: PBO:0055278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2705","termid":"PBO:0055278"}


id: MONDO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy (obsolete MONDO:0000206)","synonyms":[{"name":"obsolete cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy; CADASIL","type":"exact"}],"termid":"MONDO:0000206","xrefs":{"Monarch":{"xref_id":"0000206"}}}


id: MONDO:1012937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease characterized by severe ataxia, rigidity, and tremor with neuronal loss, spongiosis, and widespread Lewy body-like inclusions in many regions of the brain including the midbrain, basal ganglia, and neocortex that occurs in yellow-crowned parrot due to a mutation in the CADPS2 gene.","definition_xrefs":["PMID:36086934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lewy body-like disease, CADPS2-related, yellow-crowned parrot","secondary_identifiers":["OMIA:002573-151761"],"termid":"MONDO:1012937","xrefs":{"Monarch":{"xref_id":"1012937"}}}


id: PBO:0079695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 3","termid":"PBO:0079695"}


id: GO:1990455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A phospholipid phosphatase complex that catalyses the hydrolysis of the second messenger PtdIns (3,4,5)P3. Will also dephosphorylate PtdIns(3,4)P2, PtdIns3P, and Ins(1,3,4,5)P4. Dimerization is critical for its lipid phosphatase function.","definition_xrefs":["PMID:24766807","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase complex","termid":"GO:1904144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PTEN phosphatase complex","synonyms":[{"name":"phosphatase and tensin homolog","type":"exact"},{"name":"phosphatase and tensin homolog deleted on chromosome ten homodimer","type":"exact"},{"name":"phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN homodimer","type":"exact"}],"termid":"GO:1990455"}


id: MONDO:0018425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Huntington disease-like syndrome due to C9ORF72 expansions","secondary_identifiers":["GARD:21702","Orphanet:401901","MEDGEN:1676144","UMLS:C5190586"],"synonyms":[{"name":"C9ORF72-related Huntington disease phenocopy","type":"exact"},{"name":"C9ORF72-related Huntington disease-like syndrome","type":"exact"},{"name":"Huntington disease phenocopy due to C9ORF72 expansions","type":"exact"}],"termid":"MONDO:0018425","xrefs":{"Monarch":{"xref_id":"0018425"}}}


id: GO:1903787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of glutathione biosynthetic process","termid":"GO:1903786"},{"relation_name":"negatively_regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutathione biosynthetic process","synonyms":[{"name":"down regulation of glutathione anabolism","type":"exact"},{"name":"down regulation of glutathione biosynthesis","type":"exact"},{"name":"down regulation of glutathione biosynthetic process","type":"exact"},{"name":"down regulation of glutathione formation","type":"exact"},{"name":"down regulation of glutathione synthesis","type":"exact"},{"name":"down-regulation of glutathione anabolism","type":"exact"},{"name":"down-regulation of glutathione biosynthesis","type":"exact"},{"name":"down-regulation of glutathione biosynthetic process","type":"exact"},{"name":"down-regulation of glutathione formation","type":"exact"},{"name":"down-regulation of glutathione synthesis","type":"exact"},{"name":"downregulation of glutathione anabolism","type":"exact"},{"name":"downregulation of glutathione biosynthesis","type":"exact"},{"name":"downregulation of glutathione biosynthetic process","type":"exact"},{"name":"downregulation of glutathione formation","type":"exact"},{"name":"downregulation of glutathione synthesis","type":"exact"},{"name":"inhibition of glutathione anabolism","type":"narrow"},{"name":"inhibition of glutathione biosynthesis","type":"narrow"},{"name":"inhibition of glutathione biosynthetic process","type":"narrow"},{"name":"inhibition of glutathione formation","type":"narrow"},{"name":"inhibition of glutathione synthesis","type":"narrow"},{"name":"negative regulation of glutathione anabolism","type":"exact"},{"name":"negative regulation of glutathione biosynthesis","type":"exact"},{"name":"negative regulation of glutathione formation","type":"exact"},{"name":"negative regulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903787"}


id: PBO:0028170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_pyrophosphohydrolase_activity","termid":"PBO:0028170"}


id: PBO:0109317
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome Loss when Overexpressed","termid":"PBO:0109317"}


id: MONDO:0017310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marfan and Marfan-related disorder","secondary_identifiers":["UMLS:C5681015","GARD:21129","MEDGEN:1842966","Orphanet:284993"],"termid":"MONDO:0017310","xrefs":{"Monarch":{"xref_id":"0017310"}}}


id: GO:0021767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary body over time from its initial formation until its mature state. The mammillary body is a protrusion at the posterior end of the hypothalamus that contains hypothalamic nuclei.","definition_xrefs":["GO_REF:0000021","GOC:dgh","ISBN:0878937420","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary body development","termid":"GO:0021767"}


id: PBO:0054396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1792","termid":"PBO:0054396"}


id: GO:0019165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamine = ADP + 2 H+ + thiamine phosphate.","definition_xrefs":["RHEA:12012","EC:2.7.1.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"thiamine kinase activity","secondary_identifiers":["KEGG_REACTION:R02134","MetaCyc:THIKIN-RXN"],"synonyms":[{"name":"ATP:thiamin phosphotransferase activity","type":"related"},{"name":"ATP:thiamine phosphotransferase activity","type":"related"},{"name":"thiamin kinase (phosphorylating)","type":"related"},{"name":"thiamin kinase activity","type":"related"},{"name":"thiamin phosphokinase activity","type":"related"}],"termid":"GO:0019165"}


id: PBO:0038939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADH5 pseudogene 3","termid":"PBO:0038939"}


id: PBO:0084779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; involved in protein refolding after import into mitochondria","termid":"PBO:0084779"}


id: PBO:0067707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 5","termid":"PBO:0067707"}


id: GO:2001273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucose import in response to insulin stimulus.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose import in response to insulin stimulus (obsolete GO:2001273)","synonyms":[{"name":"regulation of cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:2001273"}


id: PBO:0064035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 69","termid":"PBO:0064035"}


id: PBO:0031329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chlorpropham","termid":"PBO:0031329"}


id: GO:1990686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-lipid-RNA complex containing separate low-density lipoprotein (LDL), lipid and RNA molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["GOC:vesicles","PMID:23559634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid-RNA complex","termid":"GO:1990684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"LDL-containing protein-lipid-RNA complex","termid":"GO:1990686"}


id: PBO:0071555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 20","termid":"PBO:0071555"}


id: PBO:0048118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"furin, paired basic amino acid cleaving enzyme","termid":"PBO:0048118"}


id: PBO:0116718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain cAMP effector 1","termid":"PBO:0116718"}


id: MONDO:0700057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nervous system disorder that has pain as a major feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological pain disorder","secondary_identifiers":["MEDGEN:602552","UMLS:C0423704"],"synonyms":[{"name":"neurologic pain syndrome","type":"exact"},{"name":"neurological pain disease","type":"exact"}],"termid":"MONDO:0700057","xrefs":{"Monarch":{"xref_id":"0700057"}}}


id: GO:0140414
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"}]},"cv_name":"molecular_function","definition":"Binding a substrate via a thioester at the terminal thiol of a covalentely linked phosphopantetheine prosthetic group and mediating protein-protein interactions with cognate enzymes for processing or offloading of the thiol-bound substrate.","definition_xrefs":["PMID:17502372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"phosphopantetheine-dependent carrier activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"carrier protein activity","type":"exact"}],"termid":"GO:0140414","terms_by_termid":{"GO:0000036":null}}


id: MONDO:0956992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A posterior fossa ependymoma that arises in the posterior fossa with characteristic DNA methylation patterns, including CpG island hypermethylation, global DNA hypomethylation, reduction of nuclear H3 p.K28me3 (K27me3) expression, and EZHIP overexpression.","definition_xrefs":["DOID:0081254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior fossa ependymoma","termid":"MONDO:0850339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"posterior fossa group A ependymoma","secondary_identifiers":["NCIT:C186450"],"termid":"MONDO:0956992","xrefs":{"Monarch":{"xref_id":"0956992"}}}


id: GO:0019302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-ribose, (ribo-pentose).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-ribose metabolic process","termid":"GO:0006014"},{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-ribose biosynthetic process","synonyms":[{"name":"D-ribose anabolism","type":"exact"},{"name":"D-ribose biosynthesis","type":"exact"},{"name":"D-ribose formation","type":"exact"},{"name":"D-ribose synthesis","type":"exact"}],"termid":"GO:0019302"}


id: FYPO:0005759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at late-firing replication origins is increased.","definition_xrefs":["PMID:22987637","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at replication origin","termid":"FYPO:0004961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin at late replication origin","synonyms":[{"name":"increased protein localisation to chromatin at late replication origin","type":"exact"},{"name":"increased protein localization to chromatin at late origin","type":"exact"},{"name":"increased protein localization to chromatin at late replication origins during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at late replication origins during vegetative growth","type":"exact"}],"termid":"FYPO:0005759"}


id: PBO:0012268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carboxylate transporter (predicted)","termid":"PBO:0012268"}


id: PATO:0000931
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000931 blue light sensitivity (obsolete PATO:0000931)","termid":"PATO:0000931"}


id: PBO:0117046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound ghrelin O-acyltransferase MBOAT4","termid":"PBO:0117046"}


id: PBO:0024852
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae ERO1","termid":"PBO:0024852"}


id: GO:0044362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the function of proteins in a second organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of molecular function in another organism (obsolete GO:0044362)","synonyms":[{"name":"negative regulation of molecular function in other organism","type":"exact"}],"termid":"GO:0044362"}


id: GO:0102478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-L-arabinofuranosyl-(1->2)-beta-L-arabinofuranose + H2O = 2 beta-L-arabinofuranose.","definition_xrefs":["RHEA:36051","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"beta-L-arabinofuranosidase activity","secondary_identifiers":["EC:3.2.1.185","MetaCyc:RXN-14089"],"termid":"GO:0102478"}


id: PBO:0017035
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nus1 can form a catalytically active complex with human DHDS (hCIT)","termid":"PBO:0017035"}


id: GO:0036511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the first alpha-1,2-linked mannose from the A-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:bf","PMID:12829701","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete trimming of first mannose on A branch (obsolete GO:0036511)","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8A(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8A","type":"related"},{"name":"glycoprotein mannose trimming on A branch","type":"broad"}],"termid":"GO:0036511"}


id: PBO:0059889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 12","termid":"PBO:0059889"}


id: GO:0009756
data:
  {"annotated_genes":["SJAG_02444","SJAG_00472","SJAG_01754","SJAG_01254","SJAG_01245","SJAG_00266","SJAG_04026","SJAG_02481","SJAG_04551","SJAG_00574","SJAG_02311","SJAG_02426","SJAG_03081","SJAG_00424","SJAG_01699","SJAG_04312","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106821,107171,109843,115861,116891,106232,102167,109336,94551],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[93076,108287,116709,92410,100763],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"},{"annotations":[89758,102462,103162],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902660"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of carbohydrate.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00424":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00610":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"carbohydrate mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate mediated signalling","type":"exact"}],"termid":"GO:0009756","terms_by_termid":{"GO:0010619":null,"GO:0110034":null,"GO:1902660":null}}


id: PBO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-Tim10/DDP type","termid":"PBO:0000679"}


id: PBO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein, HSR1-related (predicted)","termid":"PBO:0001769"}


id: GO:0043452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an alkyne, any acyclic branched or unbranched hydrocarbon (compound composed only of carbon and hydrogen) having a carbon-carbon triple bond and the general formula CnH2n-2, as carried out by individual cells.","definition_xrefs":["Wikipedia:Alkyne","GOC:krc","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkyne metabolic process","synonyms":[{"name":"alkyne metabolism","type":"exact"}],"termid":"GO:0043452"}


id: GO:0034329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a cell junction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cell junction assembly","secondary_identifiers":["Reactome:R-HSA-446728"],"termid":"GO:0034329"}


id: MONDO:0020920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with the organism Escherichia Coli.","definition_xrefs":["NCIT:C34594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"escherichia coli infection","secondary_identifiers":["UMLS:C0014836","GTR:AN0485755","MEDGEN:4543","MESH:D004927","GTR:AN0485754","GTR:AN0474198","EFO:1001318","SCTID:71057007","HP:0002740"],"synonyms":[{"name":"Bacterial infection caused by E. coli","type":"related"},{"name":"Bacterial infection due to E. coli","type":"related"},{"name":"Colibacillosis","type":"related"},{"name":"E COLI INFECT","type":"related"},{"name":"E Coli Infection","type":"related"},{"name":"E coli Infection","type":"related"},{"name":"E coli Infections","type":"related"},{"name":"E coli infections","type":"related"},{"name":"E coli infections, recurrent","type":"related"},{"name":"E. coli Infection","type":"related"},{"name":"E. coli Infections","type":"related"},{"name":"E. coli infection","type":"related"},{"name":"ESCHERICHIA COLI INFECT","type":"related"},{"name":"Escherichia Coli Infection","type":"related"},{"name":"Escherichia coli Infection","type":"related"},{"name":"Escherichia coli Infections","type":"related"},{"name":"Escherichia coli infection","type":"related"},{"name":"INFECT E COLI","type":"related"},{"name":"INFECT ESCHERICHIA COLI","type":"related"},{"name":"Infection caused by Escherichia coli","type":"related"},{"name":"Infection due to Escherichia coli","type":"related"},{"name":"Infection, E coli","type":"related"},{"name":"Infection, E. coli","type":"related"},{"name":"Infection, Escherichia coli","type":"related"},{"name":"Infections, E coli","type":"related"},{"name":"Infections, Escherichia coli","type":"related"},{"name":"Recurrent E. coli infections","type":"related"},{"name":"e coli infection","type":"exact"},{"name":"escherichia coli infection","type":"exact"}],"termid":"MONDO:0020920","xrefs":{"Monarch":{"xref_id":"0020920"}}}


id: PBO:0003644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-glucan synthase Mok12","termid":"PBO:0003644"}


id: MOD:00709
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a sulfur atom of L-methionine residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur oxygenated L-methionine","synonyms":[{"name":"SOxyMet","type":"exact"}],"termid":"MOD:00709"}


id: PBO:0065936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 2","termid":"PBO:0065936"}


id: MOD:00083
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6,N6,N6-trimethyl-L-lysine.","definition_xrefs":["PubMed:4304194","PubMed:7093227","RESID:AA0074","PubMed:6778808","ChEBI:17311","PubMed:8453381","PubMed:12590383","PubMed:3145979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"trimethylated protonated-residue","termid":"MOD:00711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N6,N6,N6-trimethyl-L-lysine","synonyms":[{"name":"(5S)-5-amino-5-carboxy-N,N,N-trimethylpentan-1-aminium","type":"exact"},{"name":"2-amino-6-(trimethylammonio)hexanoic acid","type":"exact"},{"name":"5-azanyl-5-carboxy-N,N,N-trimethylpentanazanium","type":"exact"},{"name":"MOD_RES N6,N6,N6-trimethyllysine","type":"exact"},{"name":"N(zeta)-trimethyllysine","type":"exact"},{"name":"N-trimethylation (of lysine)","type":"exact"},{"name":"N6,N6,N6-trimethyl-L-lysine","type":"exact"},{"name":"N6,N6,N6-trimethylated L-lysine","type":"exact"},{"name":"N6,N6,N6-trimethyllysin-N6-ium","type":"exact"},{"name":"N6,N6,N6-trimethyllysine cation","type":"exact"},{"name":"N6Me3+Lys","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"epsilon-trimethyllysine","type":"exact"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00083"}


id: PBO:0088035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding protein; functions as ubiquitin-Atg8p adaptor in ubiquitin-dependent autophagy; serves as proteaphagy receptor for inactivated 26S proteasomes; contains CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination; CUE5 has a paralog, DON1, that arose from the whole genome duplication; human TOLLIP is a functional CUE-domain homolog, can complement yeast null mutant, rescuing hypersensitivity of cue5 null mutant cells to Htt-96Q","termid":"PBO:0088035"}


id: MONDO:0060555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vertebral-cardiac-renal anomalies syndrome","termid":"MONDO:0020831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005267"],"is_obsolete":false,"name":"vertebral, cardiac, renal, and limb defects syndrome 2","secondary_identifiers":["GARD:18509","MEDGEN:1624065","OMIM:617661","UMLS:C4540014"],"synonyms":[{"name":"VCRL2","type":"related"},{"name":"congenital NAD deficiency disorder 2","type":"related"},{"name":"kynureninase deficiency, complete","type":"related"},{"name":"vertebral, cardiac, renal, and limb defects syndrome 2","type":"exact"}],"termid":"MONDO:0060555","xrefs":{"Monarch":{"xref_id":"0060555"}}}


id: MOD:00932
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:499","PubMed:11821862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"IDBEST tag for quantitation","synonyms":[{"name":"Heavy IDBEST tag for quantitation","type":"related"},{"name":"IGBP:13C(2)","type":"related"}],"termid":"MOD:00932"}


id: PBO:0071677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 9","termid":"PBO:0071677"}


id: MONDO:0958091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate-congenital heart defect-intellectual disability syndrome","secondary_identifiers":["UMLS:C5924219","MEDGEN:1859712","Orphanet:652519"],"termid":"MONDO:0958091","xrefs":{"Monarch":{"xref_id":"0958091"}}}


id: GO:1902113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any nucleotide phosphorylation that is involved in DNA repair.","definition_xrefs":["PMID:11729194","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphorylation involved in DNA repair (obsolete GO:1902113)","termid":"GO:1902113"}


id: FYPO:0008122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion fusion is increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fusion","termid":"FYPO:0008089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased mitochondrial fusion","termid":"FYPO:0008122"}


id: GO:0140749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phlorizin + H2O = beta-D-glucose + phloretin.","definition_xrefs":["PMID:9762914","RHEA:69639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"phlorizin hydrolase activity","termid":"GO:0140749"}


id: PBO:0073448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted frizzled related protein 2","termid":"PBO:0073448"}


id: GO:1990786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded DNA stimulus.","definition_xrefs":["PMID:10051633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to dsDNA","termid":"GO:1990784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dsDNA","termid":"GO:1990786"}


id: PBO:0036035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_trimethylation_during_vegetative_growth","termid":"PBO:0036035"}


id: MONDO:0019403
data:
  {"annotated_genes":["SJAG_01077","SJAG_00930","SJAG_02539","SJAG_03153"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85783,85782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[85826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[85776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"}]},"cv_name":"mondo","definition":"Congenital dyserythropoietic anemia (CDA) is a heterogenous group of hematological disorders of late erythropoiesis and red cell abnormalities that lead to anemia. Five types of CDA are defined: CDA I, CDA II, CDA III, CDA IV and thrombocytopenia with CDA.","definition_xrefs":["Orphanet:85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01077":null,"SJAG_02539":null,"SJAG_03153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"congenital dyserythropoietic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84646","UMLS:C0002876","ICD10CM:D64.4","MESH:D000742","NANDO:2200615","ICD9:285.8","SCTID:52951008","DOID:1338","GARD:1999","NANDO:1200885","MEDGEN:8064","icd11.foundation:899830967","NANDO:2100178","OMIMPS:224120"],"synonyms":[{"name":"CDA","type":"exact"},{"name":"anemia, congenital dyserythropoietic","type":"exact"},{"name":"congenital dyshaematopoietic anaemia","type":"exact"},{"name":"congenital dyshaematopoietic anemia","type":"exact"},{"name":"dyserythropoietic anemia, congenital","type":"related"}],"termid":"MONDO:0019403","terms_by_termid":{"MONDO:0007109":null,"MONDO:0009134":null,"MONDO:0012992":null},"xrefs":{"Monarch":{"xref_id":"0019403"}}}


id: PBO:0029272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029272"}


id: MONDO:0004723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the liver. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C5753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"},{"relation_name":"is_a","term_name":"hepatobiliary benign neoplasm","termid":"MONDO:0859689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"liver leiomyoma","secondary_identifiers":["DOID:917","UMLS:C1333968","MEDGEN:232276"],"synonyms":[{"name":"hepatic leiomyoma","type":"exact"},{"name":"leiomyoma of liver","type":"exact"},{"name":"leiomyoma of the liver","type":"exact"},{"name":"liver leiomyoma","type":"exact"}],"termid":"MONDO:0004723","xrefs":{"Monarch":{"xref_id":"0004723"}}}


id: MONDO:0018108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cytomegalovirus infection","termid":"MONDO:0005132"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic disseminated cytomegalovirus infection","secondary_identifiers":["MEDGEN:1826159","GARD:18811","UMLS:C5680152","Orphanet:35062"],"synonyms":[{"name":"idiopathic disseminated CMV infection","type":"exact"}],"termid":"MONDO:0018108","xrefs":{"Monarch":{"xref_id":"0018108"}}}


id: GO:1900157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone mineralization involved in bone maturation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"regulates","term_name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone mineralization involved in bone maturation","termid":"GO:1900157"}


id: GO:0070849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epidermal growth factor stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to epidermal growth factor","synonyms":[{"name":"response to EGF stimulus","type":"exact"},{"name":"response to epidermal growth factor stimulus","type":"exact"}],"termid":"GO:0070849"}


id: GO:0014011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Schwann cells by cell division, resulting in the expansion of their population in response to an axonal lesion. The newly generated Schwann cells support subsequent axon regeneration in the peripheral nervous system.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schwann cell proliferation","termid":"GO:0014010"},{"relation_name":"part_of","term_name":"peripheral nervous system axon regeneration","termid":"GO:0014012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}


id: PBO:0043385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calaxin","termid":"PBO:0043385"}


id: PBO:0084895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation elongation factor Tu (EF-Tu); involved in fundamental pathway of mtDNA homeostasis; comprises both GTPase and guanine nucleotide exchange factor activities, while these activities are found in separate proteins in S. pombe and humans; rare mutations in human mitochondrial elongation factor Tu (EFTu) associated with severe lactic acidosis, rapidly progressive fatal encephalopathy, severe infantile macrocystic leukodystrophy with micropolygyria","termid":"PBO:0084895"}


id: PBO:0034640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_condensation_during_telophase","termid":"PBO:0034640"}


id: GO:2000277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidative phosphorylation uncoupler activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"},{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxidative phosphorylation uncoupler activity","synonyms":[{"name":"positive regulation of mitochondrial uncoupling protein activity","type":"related"},{"name":"positive regulation of uncoupling protein activity","type":"related"}],"termid":"GO:2000277"}


id: PBO:0077233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 1","termid":"PBO:0077233"}


id: GO:0055052
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex for the transport of metabolites into the cell, consisting of 5 subunits: two ATP-binding subunits, two membrane spanning subunits, and one substrate-binding subunit. In organisms with two membranes, the substrate-binding protein moves freely in the periplasmic space and joins the other subunits only when bound with substrate. In organisms with only one membrane the substrate-binding protein is tethered to the cytoplasmic membrane and associated with the other subunits. Transport of the substrate across the membrane is driven by the hydrolysis of ATP.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing","termid":"GO:0055052"}


id: PBO:0055232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2659","termid":"PBO:0055232"}


id: PBO:0083572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF RRP9","termid":"PBO:0083572"}


id: PATO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of liquids.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a liquid","termid":"PATO:0001548"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liquid configuration","synonyms":[{"name":"liquid","type":"exact"}],"termid":"PATO:0001735"}


id: PBO:0002857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb6","termid":"PBO:0002857"}


id: PBO:0063150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POZ/BTB and AT hook containing zinc finger 1","termid":"PBO:0063150"}


id: MONDO:0009831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the pancreas.","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"pancreatic neoplasm","termid":"MONDO:0021040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"malignant pancreatic neoplasm","secondary_identifiers":["ICD9:157.0","ICD9:157.1","EFO:1000359","ICD9:157.2","ICD9:157.8","NCIT:C9005","DOID:1793"],"synonyms":[{"name":"Ca body of pancreas","type":"exact"},{"name":"Ca head of pancreas","type":"exact"},{"name":"Ca tail of pancreas","type":"exact"},{"name":"cancer of pancreas","type":"exact"},{"name":"malignant neoplasm of body of pancreas","type":"exact"},{"name":"malignant neoplasm of head of pancreas","type":"exact"},{"name":"malignant neoplasm of pancreas","type":"exact"},{"name":"malignant neoplasm of tail of pancreas","type":"exact"},{"name":"malignant neoplasm of the pancreas","type":"exact"},{"name":"malignant pancreas neoplasm","type":"exact"},{"name":"malignant pancreatic neoplasm","type":"exact"},{"name":"pancreas cancer","type":"exact"},{"name":"pancreas neoplasm","type":"broad"},{"name":"pancreatic cancer","type":"exact"},{"name":"pancreatic tumour","type":"related"}],"termid":"MONDO:0009831","xrefs":{"Monarch":{"xref_id":"0009831"}}}


id: PBO:0036003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0036003"}


id: PBO:0063674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 3","termid":"PBO:0063674"}


id: MONDO:0010501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macrocephaly-intellectual disability-left ventricular non compaction syndrome is a rare, genetic, syndromic intellectual disability characterized by motor and cognitive developmental delay with language impairment, macrocephaly, hypotonia, dysmorphic facial features (including long face, slanting palpebral fissures and prominent, flattened nose) and left ventricular noncompaction cardiomyopathy. Patients also present skeletal abnormalities (e.g. scoliosis, finger clinodactyly, pes planus), slender build and shy behavior. Strabismus and various neurological signs (including ataxia, tremor and hyperreflexia) may be associated, as well as epilepsy, autism and MRI findings showing a small cerebellum and abnormalities of the corpus callosum. A phenotypic variant with no cardiac involvement has been reported.","definition_xrefs":["Orphanet:466791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability 34","secondary_identifiers":["OMIM:300967","UMLS:C4225417","GARD:17832","MEDGEN:902184","DOID:0060817"],"synonyms":[{"name":"MRXS34","type":"exact"},{"name":"MRXSML","type":"exact"},{"name":"NONO X-linked syndromic intellectual disability","type":"exact"},{"name":"X-linked syndromic intellectual disability caused by mutation in NONO","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic 34","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 34","type":"exact"},{"name":"intellectual disability, X-linked, syndromic type 34","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Mircsof-Langouet type","type":"related"},{"name":"macrocephaly-intellectual disability-left ventricular non compaction syndrome","type":"exact"},{"name":"mental retardation, X-linked, syndromic 34","type":"exact"},{"name":"mental retardation, X-linked, syndromic type 34","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Mircsof-Langouet type","type":"related"},{"name":"syndromic X-linked intellectual disability Mircsof-Langouet type","type":"exact"},{"name":"syndromic X-linked intellectual disability type 34","type":"exact"},{"name":"syndromic X-linked mental retardation Mircsof-Langouet type","type":"exact"}],"termid":"MONDO:0010501","xrefs":{"Monarch":{"xref_id":"0010501"}}}


id: MONDO:1012640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in dogs and is characterized by low plasma vWF concentrations and mild to moderate bleeding symptoms due to a mutation in the VWF gene.","definition_xrefs":["OMIA:001057-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Von Willebrand disease, dog","termid":"MONDO:1011612"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease I, dog","synonyms":[{"name":"type 1 von Willebrand disease, dog","type":"related"},{"name":"vWDI","type":"exact"}],"termid":"MONDO:1012640","xrefs":{"Monarch":{"xref_id":"1012640"}}}


id: MONDO:0003128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pulmonary blastoma composed of a mixture of irregular tubular structures and mesenchymal elements.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary blastoma","termid":"MONDO:0005933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"classic pulmonary blastoma","secondary_identifiers":["DOID:4767","MEDGEN:231445","NCIT:C36054","UMLS:C1332556"],"synonyms":[{"name":"biphasic pulmonary blastoma","type":"exact"},{"name":"classic pulmonary blastoma","type":"exact"}],"termid":"MONDO:0003128","xrefs":{"Monarch":{"xref_id":"0003128"}}}


id: MONDO:0100489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thyroid disease, susceptibility to","termid":"MONDO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Graves disease, susceptibility to, 1","secondary_identifiers":["OMIM:275000","MEDGEN:341307","UMLS:C1848795"],"synonyms":[{"name":"Graves disease, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0100489","xrefs":{"Monarch":{"xref_id":"0100489"}}}


id: PBO:0049052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR50 antisense RNA 1","termid":"PBO:0049052"}


id: PBO:0015271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNUTS homologue, mRNA cleavage and polyadenylation specificity factor complex associated protein","termid":"PBO:0015271"}


id: GO:0045465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of the R8 photoreceptor.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R8 cell differentiation","termid":"GO:0045465"}


id: MONDO:0008385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhiny","secondary_identifiers":["MEDGEN:401188","MESH:C566708","UMLS:C1867222","OMIM:180360"],"synonyms":[{"name":"craniorhiny","type":"related"},{"name":"rhiny","type":"exact"}],"termid":"MONDO:0008385","xrefs":{"Monarch":{"xref_id":"0008385"}}}


id: MONDO:0043230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poisoning caused by ingestion of seafood containing microgram levels of ciguatoxins. The poisoning is characterized by gastrointestinal, neurological and cardiovascular disturbances.","definition_xrefs":["MESH:D036841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciguatera fish poisoning","secondary_identifiers":["SCTID:241774007","EFO:1001291"],"synonyms":[{"name":"Poisonings, ciguatera","type":"related"},{"name":"Poisonings, ciguatera fish","type":"related"},{"name":"ciguatera","type":"related"},{"name":"ciguatera Poisonings","type":"related"},{"name":"ciguatera fish Poisonings","type":"related"},{"name":"ciguatera fish poisoning","type":"exact"},{"name":"ciguatera poisoning","type":"related"},{"name":"ciguatoxin causing toxic effect","type":"exact"},{"name":"poisoning, ciguatera","type":"related"},{"name":"poisoning, ciguatera fish","type":"related"},{"name":"toxic effect of ciguatera fish poisoning","type":"related"}],"termid":"MONDO:0043230","xrefs":{"Monarch":{"xref_id":"0043230"}}}


id: PBO:0076548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 2","termid":"PBO:0076548"}


id: GO:0016121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carotenes, hydrocarbon carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"},{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"carotene catabolic process","synonyms":[{"name":"carotene breakdown","type":"exact"},{"name":"carotene catabolism","type":"exact"},{"name":"carotene degradation","type":"exact"}],"termid":"GO:0016121"}


id: GO:1900189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"positively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"activation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"activation of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"positive regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"up-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"up-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"upregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"upregulation of cell adhesion involved in single-species biofilm formation","type":"exact"}],"termid":"GO:1900189"}


id: PBO:0087609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7","termid":"PBO:0087609"}


id: PBO:0050021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP alpha 2 (pseudogene)","termid":"PBO:0050021"}


id: SO:0000698
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding an mRNA that has the stop codon redefined as pyrrolysine.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_redefined_as_pyrrolysine","termid":"SO:0000884"},{"relation_name":"is_a","term_name":"gene_with_stop_codon_read_through","termid":"SO:0000697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_redefined_as_pyrrolysine","synonyms":[{"name":"gene with stop codon redefined as pyrrolysine","type":"exact"}],"termid":"SO:0000698"}


id: FYPO:0000047
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119854,119852,119853,119856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"}],"single_locus_phenotype":[{"annotations":[119504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"},{"annotations":[119733,119735,119867,119734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001357"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow normally (i.e. indistinguishably from wild type). 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id: GO:0060353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion molecule production","termid":"GO:0060353"}


id: MONDO:0009349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most severe form of holoprosencephaly in which there is a complete absence of midline forebrain division resulting in the presence of fused hemispheres and a single ventricle (alobar holoprosencephaly). It is mapped to chromosome 21q22.","definition_xrefs":["NCIT:C75476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 1","secondary_identifiers":["DOID:0110881","OMIM:236100","UMLS:C0266667","MEDGEN:78617"],"synonyms":[{"name":"Demyer sequence","type":"related"},{"name":"HPE1","type":"exact"},{"name":"Hpe, familial","type":"broad"},{"name":"arhinencephaly","type":"related"},{"name":"cyclopia","type":"broad"},{"name":"holoprosencephaly 1","type":"exact"},{"name":"holoprosencephaly 1, isolated cases","type":"exact"},{"name":"holoprosencephaly type 1","type":"exact"},{"name":"holoprosencephaly, familial Alobar","type":"related"},{"name":"isolated arhinencephaly","type":"related"}],"termid":"MONDO:0009349","xrefs":{"Monarch":{"xref_id":"0009349"}}}


id: MONDO:0011197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary thermosensitive neuropathy is a rare, demyelinating, hereditary motor and sensory neuropathy characterized by reversible episodes of ascending muscle weakness, paresthesias and areflexia triggered by a febrile episode, with or without pressure palsy.","definition_xrefs":["Orphanet:84093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary thermosensitive neuropathy","secondary_identifiers":["MEDGEN:355568","GARD:16731","OMIM:602107","UMLS:C1865856","SCTID:715645004","icd11.foundation:1124144144","MESH:C566575"],"synonyms":[{"name":"neuropathy, hereditary thermosensitive","type":"related"}],"termid":"MONDO:0011197","xrefs":{"Monarch":{"xref_id":"0011197"}}}


id: PBO:0000248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase (predicted)","termid":"PBO:0000248"}


id: PBO:0116394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular thiamine-repressible acid phosphatase Pho4","termid":"PBO:0116394"}


id: GO:0008641
data:
  {"annotated_genes":["SJAG_05032","SJAG_00878","SJAG_02082","SJAG_00853","SJAG_02084","SJAG_00604","SJAG_03950","SJAG_00645","SJAG_03896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70013],"is_not":false,"summary":null,"term":"GO:0008641"},{"annotations":[73816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019778"},{"annotations":[73817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019779"},{"annotations":[71728,79913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019781"},{"annotations":[98083,75933,96531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019948"},{"annotations":[74243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004839"},{"annotations":[74551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042292"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-sulfur bonds","termid":"GO:0016877"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00645":null,"SJAG_00853":null,"SJAG_00878":null,"SJAG_02082":null,"SJAG_02084":null,"SJAG_03896":null,"SJAG_03950":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874","GO:0140096"],"is_obsolete":false,"name":"ubiquitin-like modifier activating enzyme activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008642"],"synonyms":[{"name":"small protein activating enzyme activity","type":"narrow"}],"termid":"GO:0008641","terms_by_termid":{"GO:0004839":null,"GO:0008641":null,"GO:0019778":null,"GO:0019779":null,"GO:0019781":null,"GO:0019948":null,"GO:0042292":null}}


id: PBO:0055755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA osteogenesis associated","termid":"PBO:0055755"}


id: PBO:0088272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic peptidase domain superfamily","termid":"PBO:0088272"}


id: PBO:0114503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific microprotein, GPI anchor","termid":"PBO:0114503"}


id: GO:0062180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: calcidiol + 2 H+ + O2 + 2 reduced [adrenodoxin] = (23S)-23,25-dihydroxycalciol + H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:30205156","PMID:22100522","RHEA:46616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"25-hydroxycholecalciferol-23-hydroxylase activity","termid":"GO:0062180"}


id: FYPO:0001071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"transport phenotype during vegetative growth","termid":"FYPO:0001336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal transport","synonyms":[{"name":"normal transport during mitotic cell cycle","type":"related"},{"name":"normal transport during vegetative growth","type":"exact"}],"termid":"FYPO:0001071"}


id: GO:0090173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptonemal complex assembly. Synaptonemal complex assembly is the cell cycle process in which the synaptonemal complex, a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination, is formed.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"synaptonemal complex assembly","termid":"GO:0007130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of synaptonemal complex assembly","termid":"GO:0090173"}


id: PBO:0091562
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FolliculiN-interacting Protein","termid":"PBO:0091562"}


id: GO:1990254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a keratin filament, an intermediate filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells.","definition_xrefs":["PMID:6170061","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament binding","termid":"GO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"keratin filament binding","termid":"GO:1990254"}


id: SO:1000151
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal inversion caused by three breaks in the same chromosome; both central segments are inverted in place (i.e., they are not transposed).","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipartite_inversion","synonyms":[{"name":"(Drosophila)bIn","type":"related"},{"name":"bipartite inversion","type":"exact"}],"termid":"SO:1000151"}


id: GO:0015879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of carnitine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"carnitine transport","synonyms":[{"name":"vitamin Bt transport","type":"exact"}],"termid":"GO:0015879"}


id: GO:1902841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["PMID:24004945","GO_REF:0000058","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of netrin-activated signaling pathway","synonyms":[{"name":"regulation of netrin signaling pathway","type":"exact"},{"name":"regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"regulation of netrin-activated signalling pathway","type":"exact"},{"name":"regulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902841"}


id: GO:1905190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metaphase/anaphase transition of meiosis II.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21389117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902103"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiosis II","termid":"GO:1905189"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of meiosis II","termid":"GO:1990950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of metaphase/anaphase transition of meiosis II","synonyms":[{"name":"negative regulation of meiosis II metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905190"}


id: PBO:0047996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member M, pseudogene","termid":"PBO:0047996"}


id: FYPO:0000493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial genome maintenance is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial genome maintenance","termid":"FYPO:0000490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased mitochondrial genome maintenance","synonyms":[{"name":"increased mitochondrial genome maintenance during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial genome maintenance during vegetative growth","type":"exact"},{"name":"mitochondrial genome maintenance: increased","type":"related"}],"termid":"FYPO:0000493"}


id: PBO:0075385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp1 transcription factor","termid":"PBO:0075385"}


id: PBO:0029560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_Calcofluor_White","termid":"PBO:0029560"}


id: PBO:0076273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 1 like","termid":"PBO:0076273"}


id: MONDO:0007505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"earring holes, natural","secondary_identifiers":["UMLS:C1851895","OMIM:129000","MEDGEN:338809"],"synonyms":[{"name":"earlobe sinuses","type":"related"},{"name":"earring holes, natural","type":"exact"}],"termid":"MONDO:0007505","xrefs":{"Monarch":{"xref_id":"0007505"}}}


id: PBO:0072527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 56","termid":"PBO:0072527"}


id: MONDO:0015337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A craniosynostosis that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"isolated craniosynostosis","secondary_identifiers":["NANDO:2200843","Orphanet:139390","MEDGEN:1863457","UMLS:C5848302"],"synonyms":[{"name":"nonsyndromic craniosynostosis","type":"exact"}],"termid":"MONDO:0015337","xrefs":{"Monarch":{"xref_id":"0015337"}}}


id: GO:0021986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the habenula over time from its initial formation until its mature state. The habenula is the group of nuclei that makes up the stalk of the pineal gland.","definition_xrefs":["GO_REF:0000021","GOC:jid","ISBN:9780721601465","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"epithalamus development","termid":"GO:0021538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"habenula development","termid":"GO:0021986"}


id: PBO:0048435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi brefeldin A resistant guanine nucleotide exchange factor 1","termid":"PBO:0048435"}


id: GO:0010954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of protein maturation by peptide bond cleavage.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteolysis","termid":"GO:0045862"},{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"positively_regulates","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"positive regulation of protein processing","synonyms":[{"name":"positive regulation of protein maturation by peptide bond cleavage","type":"exact"}],"termid":"GO:0010954"}


id: MONDO:0012525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the RD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"RD3-related retinopathy","termid":"MONDO:0700235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 12","secondary_identifiers":["UMLS:C1857743","OMIM:610612","ICD10CM:H35.5","MESH:C565697","DOID:0110080","GARD:10489","MEDGEN:347535"],"synonyms":[{"name":"LCA12","type":"exact"},{"name":"Leber congenital amaurosis 12","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in RD3","type":"exact"},{"name":"Leber congenital amaurosis type 12","type":"exact"},{"name":"RD3 Leber congenital amaurosis","type":"exact"},{"name":"amaurosis congenita of Leber, type 12","type":"related"}],"termid":"MONDO:0012525","xrefs":{"Monarch":{"xref_id":"0012525"}}}


id: PBO:0055774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of numb-protein X 2","termid":"PBO:0055774"}


id: PBO:0028630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U6_2'-O-snRNA_methylation_at_residue_A41","termid":"PBO:0028630"}


id: PR:O74867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.17c gene.","definition_xrefs":["UniProtKB:O74867","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.17c","synonyms":[{"name":"Spom972h-SPCC18.17c","type":"exact"}],"termid":"PR:O74867"}


id: MONDO:0018513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon carcinoma","termid":"MONDO:0002032"},{"relation_name":"is_a","term_name":"colorectal squamous cell carcinoma","termid":"MONDO:0006165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"squamous cell carcinoma of colon","secondary_identifiers":["MEDGEN:272494","NCIT:C5490","DOID:5519","UMLS:C1333100","SCTID:766981007","Orphanet:423994","GARD:21768"],"synonyms":[{"name":"colon epidermoid carcinoma","type":"exact"},{"name":"colon squamous cell cancer","type":"exact"},{"name":"colon squamous cell carcinoma","type":"exact"},{"name":"colonic epidermoid carcinoma","type":"exact"},{"name":"colonic squamous cell carcinoma","type":"exact"},{"name":"epidermoid carcinoma of colon","type":"exact"},{"name":"epidermoid carcinoma of the colon","type":"exact"},{"name":"squamous cell carcinoma of colon","type":"exact"},{"name":"squamous cell carcinoma of the colon","type":"exact"},{"name":"squamous cell colon carcinoma","type":"exact"}],"termid":"MONDO:0018513","xrefs":{"Monarch":{"xref_id":"0018513"}}}


id: GO:2000066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid biosynthetic process","termid":"GO:0031948"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"is_a","term_name":"regulation of cortisol biosynthetic process","termid":"GO:2000064"},{"relation_name":"positively_regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of cortisol biosynthetic process","synonyms":[{"name":"positive regulation of cortisol anabolism","type":"related"},{"name":"positive regulation of cortisol biosynthesis","type":"exact"},{"name":"positive regulation of cortisol formation","type":"exact"},{"name":"positive regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000066"}


id: PR:P15567
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P15567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.13","synonyms":[{"name":"AIR carboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AIRC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade6","type":"exact"}],"termid":"PR:P15567"}


id: GO:0050936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a xanthophore cell. Xanthophores are pigment cells derived from the neural crest. They contain pteridine and/or carotenoid pigments in structures called pterinosomes or xanthosomes. This makes them yellow to orange in appearance.","definition_xrefs":["PMID:11858836","GOC:mh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xanthophore differentiation","synonyms":[{"name":"xanthophore cell differentiation","type":"exact"}],"termid":"GO:0050936"}


id: GO:0044542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal activation of plasminogen, the pathway resulting in the processing of inactive plasminogen to active plasmin in the host organism. This can facilitate the dissemination of the symbiont into host tissues. It can also be used to destroy complement, opsonins as well as antibacterial proteins like histones.","definition_xrefs":["PMID:18070889","PMID:34305859","PMID:27533300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host plasminogen","synonyms":[{"name":"plasminogen activation in another organism","type":"broad"},{"name":"plasminogen activation in other organism","type":"broad"}],"termid":"GO:0044542"}


id: PBO:0044955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 2","termid":"PBO:0044955"}


id: FYPO:0002984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methyl methanesulfonate is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal RNA accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal RNA level during cellular response to MMS","type":"exact"},{"name":"normal RNA level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"normal mRNA level during cellular response to methyl methanesulfonate","type":"narrow"},{"name":"normal transcript level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002984"}


id: GO:0016697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, cytochrome as acceptor","secondary_identifiers":["EC:1.12.2.-","GO:0016698"],"termid":"GO:0016697"}


id: MONDO:0007851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any keratoconus in which the cause of the disease is a mutation in the VSX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 1","secondary_identifiers":["OMIM:148300","UMLS:C1835677","MEDGEN:372103","MESH:C563649"],"synonyms":[{"name":"KTCN1","type":"related"},{"name":"VSX1 keratoconus (disease)","type":"exact"},{"name":"keratoconus (disease) caused by mutation in VSX1","type":"exact"},{"name":"keratoconus 1","type":"exact"},{"name":"keratoconus type 1","type":"exact"}],"termid":"MONDO:0007851","xrefs":{"Monarch":{"xref_id":"0007851"}}}


id: PBO:0039637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase O (putative)","termid":"PBO:0039637"}


id: PBO:0083954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-tubulin small complex (gamma-TuSC) receptor; recruits the gamma-TuSC complex to the cytoplasmic side of the SPB, connecting nuclear microtubules to the SPB; involved in astral microtubule formation, stabilization, and with Stu2p, anchoring astral MTs at the cytoplasmic face of the SPB, and regulating plus-end MT dynamics; regulated by Cdc5 kinase","termid":"PBO:0083954"}


id: MONDO:0012871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Jervell and Lange-Nielsen syndrome in which the cause of the disease is a mutation in the KCNE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jervell and Lange-Nielsen syndrome","termid":"MONDO:0002441"},{"relation_name":"is_a","term_name":"long QT syndrome 5","termid":"MONDO:0013372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Jervell and Lange-Nielsen syndrome 2","secondary_identifiers":["MEDGEN:394108","GARD:10364","MESH:C567343","OMIM:612347","UMLS:C2676723"],"synonyms":[{"name":"JLNS2","type":"related"},{"name":"Jervell and Lange-Nielsen syndrome 2","type":"exact"},{"name":"Jervell and Lange-Nielsen syndrome caused by mutation in KCNE1","type":"exact"},{"name":"Jervell and Lange-Nielsen syndrome type 2","type":"exact"},{"name":"KCNE1 Jervell and Lange-Nielsen syndrome","type":"exact"}],"termid":"MONDO:0012871","xrefs":{"Monarch":{"xref_id":"0012871"}}}


id: PBO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp105","termid":"PBO:0004504"}


id: SO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An A box within an RNA polymerase III type 2 promoter.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"A_box","termid":"SO:0000619"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_2","termid":"SO:0000618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_box_type_2","synonyms":[{"name":"A box type 2","type":"related"}],"termid":"SO:0001676"}


id: MONDO:0009813
data:
  {"annotated_genes":["SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"}]},"cv_name":"mondo","definition":"Chronic non bacterial osteomyelitis (CNO), also known as chronic recurrent multifocal osteomyelitis (CRMO), is a chronic autoinflammatory syndrome that is characterized by multiple foci of painful swelling of bones, mainly in the metaphyses of the long bones, in addition to the pelvis, the shoulder girdle and the spine.","definition_xrefs":["Orphanet:324964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteomyelitis","termid":"MONDO:0005246"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"chronic recurrent multifocal osteomyelitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0410422","DOID:0060645","GARD:6108","HP:0002754","MEDGEN:140822","NANDO:2200438","NANDO:1200869","NCIT:C119042","OMIMPS:609628","icd11.foundation:1256384247","SCTID:240151005","MESH:C535456"],"synonyms":[{"name":"CMO","type":"related"},{"name":"CNO/CRMO","type":"exact"},{"name":"CRMO","type":"exact"},{"name":"NBO","type":"exact"},{"name":"chronic multifocal osteomyelitis","type":"exact"},{"name":"chronic nonbacterial osteomyelitis/chronic recurrent multifocal osteomyelitis","type":"related"},{"name":"chronic recurrent multifocal osteomyelitis","type":"exact"},{"name":"chronic recurrent multifocal osteomyelitis (disease)","type":"exact"},{"name":"multifocal osteomyelitis, chronic","type":"related"},{"name":"non-bacterial osteomyelitis","type":"exact"},{"name":"osteomyelitis, chronic multifocal","type":"related"}],"termid":"MONDO:0009813","terms_by_termid":{"MONDO:0012316":null},"xrefs":{"Monarch":{"xref_id":"0009813"}}}


id: PBO:0050990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 80","termid":"PBO:0050990"}


id: PBO:0004090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase Uge1","termid":"PBO:0004090"}


id: PBO:0074553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 6","termid":"PBO:0074553"}


id: PBO:0117052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO1D antisense RNA 1","termid":"PBO:0117052"}


id: PBO:0011506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, similar to a region of alpha-galactosidase, melibiase, possible pseudogene","termid":"PBO:0011506"}


id: GO:0003716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that brings about termination of transcription by RNA polymerase I.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase I transcription termination factor activity (obsolete GO:0003716)","synonyms":[{"name":"Pol I transcription termination factor activity","type":"exact"},{"name":"RNA polymerase I transcription termination factor activity","type":"exact"}],"termid":"GO:0003716"}


id: GO:1905266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of blasticidin S.","definition_xrefs":["GOC:pr","Wikipedia:Blasticidin_S","GO_REF:0000068","PMID:23874663","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside biosynthetic process","termid":"GO:0046134"},{"relation_name":"is_a","term_name":"blasticidin S metabolic process","termid":"GO:1905264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"blasticidin S biosynthetic process","synonyms":[{"name":"blasticidin S anabolism","type":"exact"},{"name":"blasticidin S biosynthesis","type":"exact"},{"name":"blasticidin S formation","type":"exact"},{"name":"blasticidin S synthesis","type":"exact"}],"termid":"GO:1905266"}


id: PBO:0089234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein","termid":"PBO:0089234"}


id: PBO:0088669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp10","termid":"PBO:0088669"}


id: GO:0006522
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alanine, 2-aminopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"alanine metabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"alanine metabolism","type":"exact"}],"termid":"GO:0006522","terms_by_termid":{"GO:0042853":null}}


id: _global:has_integral_part
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X has_integral_part Y if and only if: X has_part Y and Y part_of X.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"_global:has_part"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_integral_part","termid":"_global:has_integral_part"}


id: PBO:0084059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein (GAP) for Rho3p, involved in cell polarity green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and cytoplasm; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0084059"}


id: PBO:0086291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in endocytosis and vacuole integrity; peripheral membrane protein; interacts with and negatively regulates Arl1p; localizes to the endosome; member of the Sec7p family of proteins","termid":"PBO:0086291"}


id: PR:O13831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp2 gene.","definition_xrefs":["UniProtKB:O13831","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.15","synonyms":[{"name":"Spom972h-trp2","type":"exact"}],"termid":"PR:O13831"}


id: GO:0102945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose(2-) + soyasapogenol B = UDP(3-) + a soyasapogenol B monoglucoside.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete soyasapogenol B UDP-glucosyl transferase activity (obsolete GO:0102945)","termid":"GO:0102945"}


id: PBO:0063995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 29","termid":"PBO:0063995"}


id: GO:0070819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protoporphyrinogen IX + menaquinone = protoporphyrin IX + reduced menaquinone.","definition_xrefs":["GOC:mah","PMID:19583219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"},{"relation_name":"is_a","term_name":"protoporphyrinogen oxidase activity","termid":"GO:0070818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"menaquinone-dependent protoporphyrinogen oxidase activity","synonyms":[{"name":"protoporphyrinogen-IX:menaquinone oxidoreductase activity","type":"exact"}],"termid":"GO:0070819"}


id: PR:Q9P7E8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An SH3 domain-containing protein 19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein app1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ760.02c","secondary_identifiers":["UniProtKB:Q9P7E8"],"synonyms":[{"name":"Spom972h-SH3D19","type":"exact"}],"termid":"PR:Q9P7E8"}


id: PBO:0061835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 3","termid":"PBO:0061835"}


id: PBO:0110504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 8","termid":"PBO:0110504"}


id: PBO:0079758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncoupling protein 1","termid":"PBO:0079758"}


id: GO:0120198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the size of an imaginal disc-derived wing.","definition_xrefs":["PIMD:23485686","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived wing size","termid":"GO:0044719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of imaginal disc-derived wing size","termid":"GO:0120198"}


id: PATO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000095 absolute drug sensitivity (obsolete PATO:0000095)","termid":"PATO:0000095"}


id: MONDO:0012923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the CAV1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"},{"relation_name":"is_a","term_name":"Berardinelli-Seip congenital lipodystrophy","termid":"MONDO:0018883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 3","secondary_identifiers":["OMIM:612526","MEDGEN:436541","UMLS:C2675861","GARD:13389","DOID:0111137","MESH:C567282"],"synonyms":[{"name":"BSCL3","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy type 3","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 3","type":"related"},{"name":"CAV1 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"CAV1 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"CGL3","type":"exact"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in CAV1","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in CAV1","type":"exact"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 3","type":"related"},{"name":"lipodystrophy, congenital generalized, type 3","type":"related"},{"name":"type 3 Berardinelli-Seip congenital lipodystrophy","type":"related"}],"termid":"MONDO:0012923","xrefs":{"Monarch":{"xref_id":"0012923"}}}


id: PBO:0013017
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCm Binding protein","termid":"PBO:0013017"}


id: GO:0006670
data:
  {"annotated_genes":["SJAG_02429","SJAG_02706","SJAG_00880","SJAG_01057","SJAG_04178","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74033,79219,106317,97224,110039,77189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.","definition_xrefs":["GOC:ma","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"sphingosine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"(4E)-sphing-4-enine metabolic process","type":"exact"},{"name":"(4E)-sphing-4-enine metabolism","type":"exact"},{"name":"sphing-4-enine metabolic process","type":"exact"},{"name":"sphing-4-enine metabolism","type":"exact"},{"name":"sphingosine metabolism","type":"exact"}],"termid":"GO:0006670","terms_by_termid":{"GO:0046512":null}}


id: FYECO:0000052
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which arachidic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ arachidic acid","termid":"FYECO:0000052"}


id: MONDO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with perineal fistula (obsolete MONDO:0035780)","secondary_identifiers":["Orphanet:600952"],"termid":"MONDO:0035780","xrefs":{"Monarch":{"xref_id":"0035780"}}}


id: GO:0075178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its calcium or calmodulin-mediated signal transduction as a result of detecting host molecules in, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium or calmodulin-mediated signal transduction in response to host (obsolete GO:0075178)","synonyms":[{"name":"positive regulation of symbiont Ca++ or calmodulin-mediated signal transduction in response to host","type":"exact"},{"name":"positive regulation of symbiont calcium or calmodulin-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075178"}


id: MONDO:0958012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 9","secondary_identifiers":["OMIM:620669","MEDGEN:1845761","UMLS:C5882740"],"termid":"MONDO:0958012","xrefs":{"Monarch":{"xref_id":"0958012"}}}


id: PBO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal could be generated by overlap of UTRs","termid":"PBO:0000150"}


id: PBO:0068675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 56, pseudogene","termid":"PBO:0068675"}


id: GO:2000635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of primary microRNA processing.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of miRNA processing","termid":"GO:1903799"},{"relation_name":"is_a","term_name":"regulation of primary miRNA processing","termid":"GO:2000634"},{"relation_name":"negatively_regulates","term_name":"primary miRNA processing","termid":"GO:0031053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of primary miRNA processing","synonyms":[{"name":"negative regulation of pri-miRNA processing","type":"exact"},{"name":"negative regulation of primary microRNA processing","type":"exact"}],"termid":"GO:2000635"}


id: MONDO:0011608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis that is associated with variation in the region 13q12-q14.","definition_xrefs":["DOID:0110101","PMID:11069631","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 5","secondary_identifiers":["MEDGEN:381292","MESH:C565280","OMIM:605844","UMLS:C1853900"],"synonyms":[{"name":"ATOD5","type":"exact"},{"name":"atopic dermatitis 5","type":"exact"},{"name":"atopic dermatitis type 5","type":"exact"},{"name":"dermatitis, ATOPIC, 5","type":"related"},{"name":"dermatitis, atopic, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0011608","xrefs":{"Monarch":{"xref_id":"0011608"}}}


id: MONDO:0010178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder that is associated with mutation(s) in the CFTR gene, encoding cystic fibrosis transmembrane conductance regulator. Mutation(s) in the same gene are associated with cystic fibrosis.","definition_xrefs":["NCIT:C129303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bilateral absence of vas deferens","termid":"MONDO:0018801"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bilateral aplasia of vas deferens from CFTR mutation","secondary_identifiers":["MEDGEN:98021","OMIM:277180","UMLS:C0403814","DOID:0111864","GARD:15243"],"synonyms":[{"name":"CAVD","type":"related"},{"name":"CBAVD","type":"related"},{"name":"congenital bilateral absence of vas deferens","type":"broad"},{"name":"congenital bilateral aplasia of the vas deferens","type":"broad"},{"name":"vas deferens, congenital bilateral aplasia of","type":"broad"}],"termid":"MONDO:0010178","xrefs":{"Monarch":{"xref_id":"0010178"}}}


id: GO:1905838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomeric D-loop disassembly.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GO_REF:0000058","GOC:nc","GOC:TermGenie","PMID:15200954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"regulates","term_name":"telomeric D-loop disassembly","termid":"GO:0061820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"regulation of telomeric D-loop disassembly","termid":"GO:1905838"}


id: MONDO:0009633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"LTBP2-related ocular dysgenesis","termid":"MONDO:0100236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microspherophakia and/or megalocornea, with ectopia lentis and with or without secondary glaucoma","secondary_identifiers":["OMIM:251750","UMLS:C3538951","MEDGEN:761238"],"synonyms":[{"name":"MSPKA","type":"related"},{"name":"microspherophakia and/or megalocornea, with ectopia lentis and with or without secondary glaucoma","type":"exact"}],"termid":"MONDO:0009633","xrefs":{"Monarch":{"xref_id":"0009633"}}}


id: PBO:0078311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 7-1","termid":"PBO:0078311"}


id: PR:Q9P6J5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1683.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6J5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized permease C1683.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.05","synonyms":[{"name":"Spom972h-SPBC1683.05","type":"exact"}],"termid":"PR:Q9P6J5"}


id: PBO:0065890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB37, member RAS oncogene family","termid":"PBO:0065890"}


id: PBO:0088941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiosulfate sulfurtransferase/rhodanese-like domain Rdl2","termid":"PBO:0088941"}


id: PBO:0086713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant has long chronological lifespan; has homology to Staphylococcus aureus nuclease; GFP-fusion protein localizes to mitochondria; is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086713"}


id: GO:0050496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-glutamine residues by deamidation and esterification with omega-hydroxyceramide.","definition_xrefs":["RESID:AA0347","PMID:10411887"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-glutamyl 5-omega-hydroxyceramide ester biosynthetic process from peptidyl-glutamine (obsolete GO:0050496)","synonyms":[{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester anabolism from peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester formation from peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester synthesis from peptidyl-glutamine","type":"exact"}],"termid":"GO:0050496"}


id: PATO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conical quality inhering in a bearer by virtue of the bearer's resembling a cone, with the pointed end attached to an organism.","definition_xrefs":["wiktionary:http://en.wiktionary.org/wiki/obconical"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conical","termid":"PATO:0002021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obconical","termid":"PATO:0002347"}


id: MONDO:0024251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological syndrome caused by severe mercury poisoning.","definition_xrefs":["Wikipedia:Minamata_disease"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mercury poisoning","termid":"MONDO:0018020"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minamata disease","secondary_identifiers":["MEDGEN:43368","SCTID:39640004","UMLS:C0086626"],"synonyms":[{"name":"Chisso-Minamata disease","type":"exact"}],"termid":"MONDO:0024251","xrefs":{"Monarch":{"xref_id":"0024251"}}}


id: GO:0034899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N,N-trimethylamine + NADPH + H+ + O2 = N,N,N-trimethylamine N-oxide + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.148","UM-BBD_reactionID:r1407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trimethylamine monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05623","RHEA:31979"],"termid":"GO:0034899"}


id: PBO:0075299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous ovarian cancer associated RNA","termid":"PBO:0075299"}


id: GO:0043674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A rod-like element of the sexine and ectexine, supporting either the tectum (the layer of sexine which forms a roof over the columella), or supporting a caput (an architectural element on top of a columella).","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sexine","termid":"GO:0043673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"columella","synonyms":[{"name":"sexine 1","type":"exact"}],"termid":"GO:0043674"}


id: PATO:0001685
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A magnetic quality inhering in a bearer by virtue of the bearer's ability to exert magnitism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnetism","termid":"PATO:0001682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnetic","termid":"PATO:0001685"}


id: PBO:0000535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rok1 (predicted)","termid":"PBO:0000535"}


id: PBO:0073102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 6","termid":"PBO:0073102"}


id: GO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"regulates","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell antigen processing and presentation","synonyms":[{"name":"regulation of B lymphocyte antigen processing and presentation","type":"exact"},{"name":"regulation of B-cell antigen processing and presentation","type":"exact"},{"name":"regulation of B-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002622"}


id: GO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by living organisms to break down ingested proteins into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein digestion","termid":"GO:0044256"}


id: GO:2000781
data:
  {"annotated_genes":["SJAG_04457","SJAG_00823","SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94208,110510],"is_not":false,"summary":null,"term":"GO:2000781"},{"annotations":[107725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"positively_regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"positive regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000781","terms_by_termid":{"GO:2000781":null,"GO:2001034":null}}


id: PBO:0071396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 2","termid":"PBO:0071396"}


id: GO:0009115
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117688],"is_not":false,"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"xanthine metabolic process","termid":"GO:0046110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xanthine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006151"],"synonyms":[{"name":"xanthine breakdown","type":"exact"},{"name":"xanthine catabolism","type":"exact"},{"name":"xanthine degradation","type":"exact"},{"name":"xanthine oxidation","type":"narrow"}],"termid":"GO:0009115","terms_by_termid":{"GO:0009115":null}}


id: PBO:0048216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit rho3","termid":"PBO:0048216"}


id: PBO:0075942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG1 divergent transcript","termid":"PBO:0075942"}


id: FYPO:0004893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is normal (i.e. indistinguishable from wild type) during the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:11069657","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0002157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal 1,3-beta-D-glucan synthase activity during vegetative growth","synonyms":[{"name":"normal 1,3-beta-D-glucan synthase activity during vegetative growth during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004893"}


id: PBO:0084293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intracellular beta-1,3-endoglucanase; expression is induced during sporulation; may have a role in cortical actin cytoskeleton assembly; protein abundance increases in response to DNA replication stress","termid":"PBO:0084293"}


id: SO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"double","termid":"SO:0000985"},{"relation_name":"is_a","term_name":"DNA_chromosome","termid":"SO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_DNA_chromosome","synonyms":[{"name":"double stranded DNA chromosome","type":"exact"}],"termid":"SO:0000955"}


id: GO:1905312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis.","definition_xrefs":["PMID:17628518","GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:1905310"},{"relation_name":"positively_regulates","term_name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","synonyms":[{"name":"activation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"up-regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"upregulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:1905312"}


id: GO:0072158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a proximal tubule are generated and organized. The proximal tubule is a nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal tubule morphogenesis","termid":"GO:0072158"}


id: GO:0090541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MIT protein domain. The MIT domain is found in vacuolar sorting proteins, spastin (probable ATPase involved in the assembly or function of nuclear protein complexes), and a sorting nexin, which may play a role in intracellular trafficking.","definition_xrefs":["GOC:pm","InterPro:IPR007330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"MIT domain binding","termid":"GO:0090541"}


id: PBO:0043919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornulin","termid":"PBO:0043919"}


id: GO:0042383
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer membrane of a muscle cell, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"sarcolemma","secondary_identifiers":["Wikipedia:Sarcolemma"],"termid":"GO:0042383"}


id: PBO:0003599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex subunit Sfc9 (predicted)","termid":"PBO:0003599"}


id: GO:0046608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the isomerization of poly-cis-carotenoids to all-trans-carotenoids.","definition_xrefs":["PMID:11884677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"carotenoid isomerase activity","termid":"GO:0046608"}


id: PBO:0066744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 42","termid":"PBO:0066744"}


id: GO:1902107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte differentiation.","definition_xrefs":["GOC:TermGenie","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"is_a","term_name":"positive regulation of hemopoiesis","termid":"GO:1903708"},{"relation_name":"positively_regulates","term_name":"leukocyte differentiation","termid":"GO:0002521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte differentiation","synonyms":[{"name":"activation of immune cell differentiation","type":"narrow"},{"name":"activation of leucocyte differentiation","type":"narrow"},{"name":"activation of leukocyte differentiation","type":"narrow"},{"name":"positive regulation of immune cell differentiation","type":"exact"},{"name":"positive regulation of leucocyte differentiation","type":"exact"},{"name":"up regulation of immune cell differentiation","type":"exact"},{"name":"up regulation of leucocyte differentiation","type":"exact"},{"name":"up regulation of leukocyte differentiation","type":"exact"},{"name":"up-regulation of immune cell differentiation","type":"exact"},{"name":"up-regulation of leucocyte differentiation","type":"exact"},{"name":"up-regulation of leukocyte differentiation","type":"exact"},{"name":"upregulation of immune cell differentiation","type":"exact"},{"name":"upregulation of leucocyte differentiation","type":"exact"},{"name":"upregulation of leukocyte differentiation","type":"exact"}],"termid":"GO:1902107"}


id: PBO:0005591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Chr2 (predicted)","termid":"PBO:0005591"}


id: PBO:0000985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase (predicted)","termid":"PBO:0000985"}


id: PBO:0089876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC-50 family protein, implicated in vesicle-mediated transport","termid":"PBO:0089876"}


id: MONDO:0022454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angiosarcoma of the scalp is a rare cancer which most commonly affects the elderly. This condition is characterized by bruise-like lesions that escalate to elevated, nodular, or ulcerated tumors. Extensive local growth is common and metastasis to regional lymph nodes and to the lungs may occur. The cause of angiosarcoma of the scalp is unknown, although several associations have been reported, including lymphedema, prior radiation treatment, and environmental exposures. Treatment may include surgery, radiation and chemotherapy.","definition_xrefs":["GARD:0005814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"angiosarcoma of the scalp","synonyms":[{"name":"angiosarcoma (disease) of scalp","type":"exact"},{"name":"scalp angiosarcoma (disease)","type":"exact"}],"termid":"MONDO:0022454","xrefs":{"Monarch":{"xref_id":"0022454"}}}


id: PR:O74370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.05c","synonyms":[{"name":"Spom972h-cwf12","type":"exact"},{"name":"complexed with cdc5 protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74370"}


id: MONDO:0020210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hyperopia that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic hyperopia (obsolete MONDO:0020210)","secondary_identifiers":["Orphanet:98622"],"synonyms":[{"name":"syndrome associated with hyperopia","type":"exact"},{"name":"syndromic hyperopia","type":"exact"}],"termid":"MONDO:0020210","xrefs":{"Monarch":{"xref_id":"0020210"}}}


id: GO:0044543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with the proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in zymogen activation in another organism (obsolete GO:0044543)","synonyms":[{"name":"envenomation resulting in zymogen activation in other organism","type":"exact"}],"termid":"GO:0044543"}


id: MONDO:0011427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ascaris lumbricoides infection, susceptibility to","secondary_identifiers":["UMLS:C1858580","MEDGEN:347671","OMIM:604291"],"synonyms":[{"name":"Ascaris lumbricoides infection, susceptibility to","type":"exact"},{"name":"ascariasis, susceptibility to","type":"related"}],"termid":"MONDO:0011427","xrefs":{"Monarch":{"xref_id":"0011427"}}}


id: PBO:0049405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 2A","termid":"PBO:0049405"}


id: PR:Q9USV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrd3 gene.","definition_xrefs":["UniProtKB:Q9USV0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD-associated E3 ubiquitin-protein ligase component (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.08c","synonyms":[{"name":"Spom972h-hrd3","type":"exact"}],"termid":"PR:Q9USV0"}


id: MONDO:1012160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, sheep","secondary_identifiers":["OMIA:000631-9940"],"termid":"MONDO:1012160","xrefs":{"Monarch":{"xref_id":"1012160"}}}


id: PR:Q9P4W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01423","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.09c","secondary_identifiers":["UniProtKB:Q9P4W7"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ANAPC5","type":"exact"}],"termid":"PR:Q9P4W7"}


id: PBO:0080758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG pseudogene, Y-linked 1","termid":"PBO:0080758"}


id: MONDO:0100315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ABCD1 deficiency that presents with primary adrenocortical insufficiency between age two years and adulthood and most commonly by age 7.5 years, without evidence of neurologic abnormality; however, some degree of neurologic disability (most commonly adrenomyeloneuropathy (AMN)) usually develops by middle age.","definition_xrefs":["PMID:20301491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenoleukodystrophy","termid":"MONDO:0018544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0019053","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"isolated adrenal insufficiency","synonyms":[{"name":"isolated adrenal insufficiency","type":"exact"}],"termid":"MONDO:0100315","xrefs":{"Monarch":{"xref_id":"0100315"}}}


id: GO:0070257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of mucus from a cell or a tissue.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of mucus secretion","termid":"GO:0070255"},{"relation_name":"positively_regulates","term_name":"mucus secretion","termid":"GO:0070254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of mucus secretion","synonyms":[{"name":"positive regulation of mucus production","type":"exact"}],"termid":"GO:0070257"}


id: PBO:0028651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rRNA_precursor_level","termid":"PBO:0028651"}


id: PBO:0036372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh1 (predicted)","termid":"PBO:0036372"}


id: PBO:0052170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 1","termid":"PBO:0052170"}


id: GO:0004445
data:
  {"annotated_genes":["SJAG_04545","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052659"},{"annotations":[74163,75343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052658"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate.","definition_xrefs":["EC:3.1.3.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1D-myo-inositol-1,4,5-trisphosphate 5-phosphohydrolase activity","type":"narrow"},{"name":"5PTase activity","type":"related"},{"name":"D-myo-inositol 1,4,5-triphosphate 5-phosphatase activity","type":"narrow"},{"name":"D-myo-inositol 1,4,5-trisphosphate 5-phosphatase activity","type":"narrow"},{"name":"D-myo-inositol(1,4,5)/(1,3,4,5)-polyphosphate 5-phosphatase activity","type":"related"},{"name":"Ins(1,4,5)P(3) 5-phosphatase activity","type":"narrow"},{"name":"Ins(1,4,5)P3 5-phosphatase activity","type":"narrow"},{"name":"Ins(1,4,5)P3/Ins(1,3,4,5)P4 5-phosphatase activity","type":"related"},{"name":"InsP(3)/Ins(1,3,4,5)P(4) 5-phosphatase activity","type":"narrow"},{"name":"InsP3/Ins(1,3,4,5)P4 5-phosphatase activity","type":"narrow"},{"name":"L-myo-inositol 1,4,5-trisphosphate-monoesterase activity","type":"broad"},{"name":"inosine triphosphatase activity","type":"related"},{"name":"inositol 1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"inositol phosphate 5-phosphomonoesterase activity","type":"broad"},{"name":"inositol polyphosphate-5-phosphatase activity","type":"related"},{"name":"inositol triphosphate 5-phosphomonoesterase activity","type":"related"},{"name":"inositol trisphosphate phosphomonoesterase activity","type":"related"},{"name":"inositol-1,4,5-trisphosphate 5-phosphatase activity","type":"narrow"},{"name":"inositol-1,4,5-trisphosphate/1,3,4,5-tetrakisphosphate 5-phosphatase activity","type":"related"},{"name":"myo-inositol-1,4,5-trisphosphate 5-phosphatase activity","type":"narrow"},{"name":"type I inositol-polyphosphate phosphatase activity","type":"related"},{"name":"type II inositol polyphosphate 5-phosphatase activity","type":"related"},{"name":"type II inositol-1,4,5-trisphosphate 5-phosphatase activity","type":"narrow"}],"termid":"GO:0004445","terms_by_termid":{"GO:0052658":null,"GO:0052659":null}}


id: PBO:0080338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 102 pseudogene","termid":"PBO:0080338"}


id: PBO:0090435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1-type Uba5","termid":"PBO:0090435"}


id: PBO:0060675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necdin, MAGE family member","termid":"PBO:0060675"}


id: PBO:0091749
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1950050_1950051insG","termid":"PBO:0091749"}


id: PBO:0047664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase like","termid":"PBO:0047664"}


id: PR:Q92371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- btf3 gene.","definition_xrefs":["UniProtKB:Q92371","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.14c","synonyms":[{"name":"NAC-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-btf3","type":"exact"},{"name":"beta-NAC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92371"}


id: PBO:0003246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAPII degradation factor Def1 (predicted)","termid":"PBO:0003246"}


id: GO:0061722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-) resulting in the formation of glycerone phosphate (DHAP) and pyruvate.","definition_xrefs":["GOC:dph","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"NADH metabolic process","termid":"GO:0006734"},{"relation_name":"is_a","term_name":"ATP metabolic process","termid":"GO:0046034"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) catabolic process","termid":"GO:1902777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"sulphoglycolysis","synonyms":[{"name":"sulfoglycolysis","type":"exact"}],"termid":"GO:0061722"}


id: PBO:0109374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 7B","termid":"PBO:0109374"}


id: PBO:0070555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 21","termid":"PBO:0070555"}


id: PBO:0085701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in RNA polymerase II transcription; also required for histone modifications and splicing; constitutively recruited to the CYC1 promoter and required for recruitment of chromatin remodeling factors for the expression of CYC1 gene; interacts genetically or physically with RNAP II, TBP, TFIIS, and chromatin remodelling factors; central domain is highly conserved throughout eukaryotes; mutations confer an Spt- phenotype","termid":"PBO:0085701"}


id: PBO:0049013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6A","termid":"PBO:0049013"}


id: PBO:0059677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 43","termid":"PBO:0059677"}


id: PBO:0116501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin-repeat related protein","termid":"PBO:0116501"}


id: PBO:0052553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor D1","termid":"PBO:0052553"}


id: _global:parasite_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_host","termid":"_global:has_host"},{"relation_name":"is_a","term_name":"interacts_with_via_parasite-host_interaction","termid":"_global:interacts_with_via_parasite-host_interaction"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasite_of","secondary_identifiers":["RO:0002444"],"synonyms":[{"name":"direct parasite of","type":"exact"}],"termid":"_global:parasite_of"}


id: MOD:01843
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 5'-chloro-L-tryptophan.","definition_xrefs":["PubMed:18215770","RESID:AA0549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monochlorinated L-tryptophan","termid":"MOD:01913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-chloro-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(5-chloro-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"5'-chloro-L-tryptophan","type":"exact"},{"name":"MOD_RES 5'-chlorotryptophan","type":"exact"}],"termid":"MOD:01843"}


id: GO:0006132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoylprotein reduction (obsolete GO:0006132)","synonyms":[{"name":"dihydrolipoylprotein reduction","type":"exact"}],"termid":"GO:0006132"}


id: PBO:0087660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of SEAC, a coatomer-related complex that associates dynamically with the vacuole; Npr3p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and leading to inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; null mutant has meiotic defects; human NPRL3 homolog","termid":"PBO:0087660"}


id: GO:0031114
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule polymerization or depolymerization","termid":"GO:0031110"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"regulation of microtubule depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of microtubule disassembly","type":"exact"}],"termid":"GO:0031114","terms_by_termid":{"GO:0031117":null}}


id: PBO:0116795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosome assembly and centriole elongation protein","termid":"PBO:0116795"}


id: FYPO:0004552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation exposure during mitotic G2 phase is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0001927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to ionizing radiation during mitotic G2 phase","synonyms":[{"name":"normal cell cycle delay following ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"normal cell cycle regulation during cellular response to ionizing radiation during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to ionizing radiation during G2 phase","type":"exact"}],"termid":"FYPO:0004552"}


id: PBO:0091809
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. octosporus rsv1","termid":"PBO:0091809"}


id: GO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the intramembrane proteolysis of a signal peptide, following its removal from a preprotein.","definition_xrefs":["PMID:12077416"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptide peptidase activity (obsolete GO:0042499)","synonyms":[{"name":"SPP","type":"exact"},{"name":"signal peptide peptidase activity","type":"exact"}],"termid":"GO:0042499"}


