# terms

id: PBO:0088043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); key E2 partner with Ubc1p for the anaphase-promoting complex (APC); mediates degradation of abnormal or excess proteins, including calmodulin and histone H3; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; UBC4 has a paralog, UBC5, that arose from the whole genome duplication","termid":"PBO:0088043"}


id: GO:0044656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a post-lysosomal vacuole, a membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["GOC:rjd","PMID:22008230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle size","termid":"GO:0097494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-lysosomal vacuole size","synonyms":[{"name":"regulation of post-lysosome size","type":"exact"},{"name":"regulation of postlysosomal vacuole size","type":"exact"},{"name":"regulation of postlysosome vacuole size","type":"exact"}],"termid":"GO:0044656"}


id: FYPO:0000748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mercury ions. Cells stop growing (and may die) at a concentration of mercury ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to mercury","synonyms":[{"name":"hypersensitive to mercury","type":"exact"},{"name":"sensitive to mercury during mitotic cell cycle","type":"related"},{"name":"sensitive to mercury during vegetative growth","type":"exact"},{"name":"sensitive to mercury ions","type":"exact"}],"termid":"FYPO:0000748"}


id: PBO:0088558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) H3-K9 specific Clr6","termid":"PBO:0088558"}


id: PBO:0051597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 22 receptor subunit alpha 1","termid":"PBO:0051597"}


id: GO:0032651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050706","GO:0050722"],"synonyms":[{"name":"regulation of IL-1 beta production","type":"exact"},{"name":"regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-1 beta secretion","type":"narrow"}],"termid":"GO:0032651"}


id: PBO:0005895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamine, mitochondrial","termid":"PBO:0005895"}


id: GO:0051274
data:
  {"annotated_genes":["SJAG_03123","SJAG_04509","SJAG_04483","SJAG_04073","SJAG_05285","SJAG_02590","SJAG_04771","SJAG_01835","SJAG_04666","SJAG_03705","SJAG_04659","SJAG_01787","SJAG_03587","SJAG_00218","SJAG_04462","SJAG_01255","SJAG_02222","SJAG_01290","SJAG_04668","SJAG_00610","SJAG_02446","SJAG_01453","SJAG_00876","SJAG_01288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75527,77141,63548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[94787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[73411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[71250,73413,91919,74843,113494,76195,116148,106432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[102961,78585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[87833,92744],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[88214],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[118237,118367,92728,105670,106244,91094,103165],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"beta-glucan anabolism","type":"exact"},{"name":"beta-glucan biosynthesis","type":"exact"},{"name":"beta-glucan formation","type":"exact"},{"name":"beta-glucan synthesis","type":"exact"}],"termid":"GO:0051274","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: MONDO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated encephalocele","termid":"MONDO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"occipital encephalocele","secondary_identifiers":["UMLS:C0014067","icd11.foundation:1075031814","MEDGEN:4935","ICD10CM:Q01.2","SCTID:42376006","Orphanet:268823","GARD:20969"],"termid":"MONDO:0017080","xrefs":{"Monarch":{"xref_id":"0017080"}}}


id: GO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-15","termid":"GO:0070672"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-15","synonyms":[{"name":"cellular response to IL-15","type":"exact"}],"termid":"GO:0071350"}


id: GO:0034176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 12 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 12 signaling pathway","termid":"GO:0034175"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 12 signaling pathway","termid":"GO:0034174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 12 signaling pathway","synonyms":[{"name":"negative regulation of TLR12 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034176"}


id: PBO:0036388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human AIG1 and ADTRP ortholog","termid":"PBO:0036388"}


id: PBO:0086506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein involved in sphingolipid biosynthesis; not an essential gene; YOR365C has a paralog, FLC2, that arose from the whole genome duplication","termid":"PBO:0086506"}


id: GO:0032922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"},{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"circadian regulation of gene expression","synonyms":[{"name":"circadian regulation of protein expression","type":"related"},{"name":"diurnal variation of gene expression","type":"related"},{"name":"diurnal variation of protein expression","type":"related"}],"termid":"GO:0032922"}


id: MONDO:0019434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic-onset juvenile idiopathic arthritis is marked by the severity of the extra-articular manifestations (fever, cutaneous eruptions) and by an equal sex ratio.","definition_xrefs":["Orphanet:85414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic-onset juvenile idiopathic arthritis","secondary_identifiers":["MEDGEN:346934","MESH:C565798","NANDO:1200470","EFO:1001999","NANDO:2201055","NCIT:C119031","GARD:10966","SCTID:201796004","UMLS:C1858558","icd11.foundation:504387587"],"synonyms":[{"name":"SoJIA","type":"exact"},{"name":"Still disease","type":"exact"},{"name":"Still's disease (formerly)","type":"related"},{"name":"sJIA","type":"exact"},{"name":"systemic juvenile idiopathic arthritis","type":"related"},{"name":"systemic onset juvenile idiopathic arthritis","type":"related"},{"name":"systemic onset juvenile rheumatoid arthritis","type":"related"},{"name":"systemic polyarthritis","type":"exact"},{"name":"systemic-onset JIA","type":"exact"}],"termid":"MONDO:0019434","xrefs":{"Monarch":{"xref_id":"0019434"}}}


id: FYPO:0006893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased inositol hexakisphosphate kinase activity","synonyms":[{"name":"reduced inositol hexakisphosphate kinase activity","type":"exact"}],"termid":"FYPO:0006893"}


id: GO:1902080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:TermGenie","PMID:8349590","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"}


id: MONDO:0020116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of blood coagulation disease that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare blood coagulation disease (obsolete MONDO:0020116)","secondary_identifiers":["Orphanet:98429"],"synonyms":[{"name":"rare blood coagulation disease","type":"exact"},{"name":"rare coagulation disorder","type":"related"}],"termid":"MONDO:0020116","xrefs":{"Monarch":{"xref_id":"0020116"}}}


id: PBO:0090063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf11","termid":"PBO:0090063"}


id: PBO:0085019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinamide riboside kinase; catalyzes the phosphorylation of nicotinamide riboside and nicotinic acid riboside in salvage pathways for NAD+ biosynthesis","termid":"PBO:0085019"}


id: GO:2000276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oxidative phosphorylation uncoupler activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"},{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxidative phosphorylation uncoupler activity","synonyms":[{"name":"negative regulation of mitochondrial uncoupling protein activity","type":"related"},{"name":"negative regulation of uncoupling protein activity","type":"related"}],"termid":"GO:2000276"}


id: PBO:0085601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cell separation during budding; one of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; SDS23 has a paralog, SDS24, that arose from the whole genome duplication","termid":"PBO:0085601"}


id: PBO:0064294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perilipin 2","termid":"PBO:0064294"}


id: GO:1905254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of epidermal growth factor receptor signaling pathway that is involved in heart process.","definition_xrefs":["GOC:TermGenie","GOC:bc","PMID:23069713","GO_REF:0000060","GOC:BHF","GOC:BHF_miRNA"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of epidermal growth factor receptor signaling pathway involved in heart process (obsolete GO:1905254)","synonyms":[{"name":"activation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"activation of epidermal growth factor receptor signaling pathway involved in heart process","type":"narrow"},{"name":"positive regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"positive regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"positive regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"stimulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"stimulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"narrow"},{"name":"up regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905254"}


id: GO:0010013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to N-1-naphthylphthalamic acid, an auxin transport inhibitor.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"N-1-naphthylphthalamic acid binding","termid":"GO:0010013"}


id: GO:0140278
data:
  {"annotated_genes":["SJAG_02916","SJAG_01114","SJAG_00514","SJAG_02215","SJAG_03123","SJAG_04597","SJAG_02222","SJAG_01188","SJAG_00442","SJAG_05285","SJAG_03631","SJAG_03704","SJAG_01805","SJAG_03048","SJAG_04690","SJAG_04468","SJAG_05290","SJAG_04776","SJAG_04666","SJAG_03342","SJAG_01453","SJAG_05179","SJAG_03379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80751,99610,102963,104986,106452,108937,113407],"is_not":false,"summary":null,"term":"GO:0140278"},{"annotations":[102691],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[78251,94128,92742,113695,118220,105506,107370,115801,106711,90192],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[87850,92743,94738],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[114714,106436],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[116149],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"The assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following mitotic cytokinesis. The progeny cells that form a division septum are not able to exchange intracellular material.","definition_xrefs":["PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division septum assembly","termid":"GO:0000917"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01453":null,"SJAG_01805":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02916":null,"SJAG_03048":null,"SJAG_03123":null,"SJAG_03342":null,"SJAG_03379":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04776":null,"SJAG_05179":null,"SJAG_05285":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044085","GO:0000281"],"is_obsolete":false,"name":"mitotic division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140278","terms_by_termid":{"GO:0031671":null,"GO:0140278":null,"GO:0140281":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: PBO:0044528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled binding antagonist of beta catenin 2","termid":"PBO:0044528"}


id: PBO:0039632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AOAH intronic transcript 1","termid":"PBO:0039632"}


id: PBO:0026944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_resulting_in_centromere-spindle_pole_body_colocalization","termid":"PBO:0026944"}


id: MONDO:0044696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome","secondary_identifiers":["OMIM:617669","Orphanet:500144","MEDGEN:1798652","UMLS:C5567229","GARD:17923"],"synonyms":[{"name":"PEBAS","type":"related"},{"name":"encephalopathy, progressive, early-onset, with brain atrophy and spasticity","type":"related"}],"termid":"MONDO:0044696","xrefs":{"Monarch":{"xref_id":"0044696"}}}


id: GO:0050814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of epothilone, a drug obtained from the myxobacteria Sporangium cellulosum that interferes with cell division. Some epothilones are being studied as treatments for cancer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"epothilone metabolic process","termid":"GO:0050813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"epothilone biosynthetic process","synonyms":[{"name":"epothilone anabolism","type":"exact"},{"name":"epothilone biosynthesis","type":"exact"},{"name":"epothilone formation","type":"exact"},{"name":"epothilone synthesis","type":"exact"}],"termid":"GO:0050814"}


id: PBO:0045006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 1","termid":"PBO:0045006"}


id: GO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal part (obsolete GO:0044439)","synonyms":[{"name":"peroxisome component","type":"exact"}],"termid":"GO:0044439"}


id: MONDO:0002930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma involving a kidney.","definition_xrefs":["MONDO:patterns/sarcoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"kidney sarcoma","secondary_identifiers":["SCTID:254918001","UMLS:C0346251","ICD9:189.0","NCIT:C4525","DOID:4242","MEDGEN:87548"],"synonyms":[{"name":"kidney sarcoma","type":"exact"},{"name":"renal sarcoma","type":"exact"},{"name":"sarcoma of kidney","type":"exact"},{"name":"sarcoma of the kidney","type":"exact"}],"termid":"MONDO:0002930","xrefs":{"Monarch":{"xref_id":"0002930"}}}


id: PBO:0076275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 3","termid":"PBO:0076275"}


id: GO:0090470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the basal boundary between the stem and both vegetative and reproductive organs are established and maintained.","definition_xrefs":["PMID:18757555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of plant organ boundary","termid":"GO:0090691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot organ boundary specification","termid":"GO:0090470"}


id: PBO:0051030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 1","termid":"PBO:0051030"}


id: GO:0098672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the CRISPR-cas system of its host. Bacteria and archaea use CRISPR-Cas adaptive immune systems to defend themselves from infection by bacteriophages (phages), and phages have various mechanisms to counter the CRISPR-cas system.","definition_xrefs":["PMID:23242138","PMID:23446421","PMID:26416740","PMID:28749735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host CRISPR-cas system","secondary_identifiers":["VZ:3962"],"synonyms":[{"name":"CRISPR-cas system evasion by virus","type":"exact"},{"name":"anti-CRISPR","type":"broad"},{"name":"evasion by virus of CRISPR-cas system","type":"related"},{"name":"inhibition of host CRISPR-cas system by virus","type":"related"},{"name":"suppression of host CRISPR-cas system","type":"exact"}],"termid":"GO:0098672"}


id: GO:0033622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits, that lead to the increased affinity of the integrin for its extracellular ligands.","definition_xrefs":["GOC:add","PMID:12213832","PMID:14754902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"integrin activation","synonyms":[{"name":"integrin complex activation","type":"exact"},{"name":"integrin complex assembly","type":"exact"}],"termid":"GO:0033622"}


id: PR:Q9UU93
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calcineurin subunit B type 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04978","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.06","secondary_identifiers":["UniProtKB:Q9UU93"],"synonyms":[{"name":"Spom972h-PPP3R1","type":"exact"},{"name":"calcineurin regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein phosphatase 2B regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU93"}


id: PATO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000278 hybrid fertility (obsolete PATO:0000278)","termid":"PATO:0000278"}


id: PR:Q9Y7Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Z7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L15, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.01c","synonyms":[{"name":"Spom972h-mrp15","type":"exact"}],"termid":"PR:Q9Y7Z7"}


id: PBO:0074152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E1 pseudogene 1","termid":"PBO:0074152"}


id: GO:1901091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein tetramerization.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein oligomerization","termid":"GO:0032460"},{"relation_name":"is_a","term_name":"regulation of protein tetramerization","termid":"GO:1901090"},{"relation_name":"negatively_regulates","term_name":"protein tetramerization","termid":"GO:0051262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of protein tetramerization","synonyms":[{"name":"down regulation of protein tetramer assembly","type":"exact"},{"name":"down regulation of protein tetramer biosynthesis","type":"exact"},{"name":"down regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"down regulation of protein tetramer formation","type":"exact"},{"name":"down regulation of protein tetramerization","type":"exact"},{"name":"down-regulation of protein tetramer assembly","type":"exact"},{"name":"down-regulation of protein tetramer biosynthesis","type":"exact"},{"name":"down-regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"down-regulation of protein tetramer formation","type":"exact"},{"name":"down-regulation of protein tetramerization","type":"exact"},{"name":"downregulation of protein tetramer assembly","type":"exact"},{"name":"downregulation of protein tetramer biosynthesis","type":"exact"},{"name":"downregulation of protein tetramer biosynthetic process","type":"exact"},{"name":"downregulation of protein tetramer formation","type":"exact"},{"name":"downregulation of protein tetramerization","type":"exact"},{"name":"inhibition of protein tetramer assembly","type":"narrow"},{"name":"inhibition of protein tetramer biosynthesis","type":"narrow"},{"name":"inhibition of protein tetramer biosynthetic process","type":"narrow"},{"name":"inhibition of protein tetramer formation","type":"narrow"},{"name":"inhibition of protein tetramerization","type":"narrow"},{"name":"negative regulation of protein tetramer assembly","type":"exact"},{"name":"negative regulation of protein tetramer biosynthesis","type":"exact"},{"name":"negative regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"negative regulation of protein tetramer formation","type":"exact"}],"termid":"GO:1901091"}


id: GO:0071311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acetate","termid":"GO:0010034"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acetate","termid":"GO:0071311"}


id: FYPO:0002826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gamma-tubulin complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal gamma-tubulin complex assembly","synonyms":[{"name":"normal gamma-tubulin complex assembly during mitotic cell cycle","type":"related"},{"name":"normal gamma-tubulin complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002826"}


id: PBO:0011508
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactic acidosis and hyperpyruvatemia","termid":"PBO:0011508"}


id: MONDO:1011595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rickets that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rickets, pig","secondary_identifiers":["OMIA:002364-9823"],"termid":"MONDO:1011595","xrefs":{"Monarch":{"xref_id":"1011595"}}}


id: GO:2000841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dehydroepiandrosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of dehydroepiandrosterone secretion","termid":"GO:2000840"},{"relation_name":"negatively_regulates","term_name":"dehydroepiandrosterone secretion","termid":"GO:0035942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dehydroepiandrosterone secretion","synonyms":[{"name":"negative regulation of 3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"negative regulation of DHEA secretion","type":"exact"},{"name":"negative regulation of dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:2000841"}


id: PBO:0006299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent oxidoreductase involved in late endosome to Golgi transport (predicted)","termid":"PBO:0006299"}


id: GO:0098919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of postsynaptic specialization","termid":"GO:0098879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of postsynaptic density","termid":"GO:0098919"}


id: PBO:0083597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; deletion confers resistance to cisplatin, hypersensitivity to 5-fluorouracil, and growth defect at high pH with high calcium; overlaps gene for SWI3 transcription factor","termid":"PBO:0083597"}


id: PBO:0071009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 11","termid":"PBO:0071009"}


id: MONDO:0013972
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87523],"is_not":false,"summary":null,"term":"MONDO:0013972"}]},"cv_name":"mondo","definition":"Any Perrault syndrome in which the cause of the disease is a mutation in the HARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0006025","MONDO:0005047","MONDO:0005066"],"is_obsolete":false,"name":"Perrault syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614926","UMLS:C3554105","Orphanet:642976","GARD:15882","MEDGEN:767019"],"synonyms":[{"name":"HARS2 Perrault syndrome","type":"exact"},{"name":"PRLTS2","type":"related"},{"name":"Perrault syndrome 2","type":"exact"},{"name":"Perrault syndrome caused by mutation in HARS2","type":"exact"},{"name":"Perrault syndrome type 2","type":"exact"}],"termid":"MONDO:0013972","terms_by_termid":{"MONDO:0013972":null},"xrefs":{"Monarch":{"xref_id":"0013972"}}}


id: GO:0071106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which adenosine 3',5'-bisphosphate is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"adenosine 3',5'-bisphosphate transmembrane transport","synonyms":[{"name":"adenosine 3',5'-bisphosphate membrane transport","type":"exact"},{"name":"adenosine 3',5'-diphosphate transport","type":"exact"},{"name":"adenosine 3'-phosphate-5'-phosphate transmembrane transport","type":"exact"}],"termid":"GO:0071106"}


id: MONDO:0016557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukonychia totalis is a rare nail anomaly disorder characterized by complete white discoloration of the nails. Patients typically present white, chalky nails as an isolated finding, although other cutaneous or systemic manifestations could also be present.","definition_xrefs":["Orphanet:2387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukonychia totalis","secondary_identifiers":["SCTID:763792009","MEDGEN:1641555","MESH:C535889","UMLS:C4551625","GARD:9759"],"synonyms":[{"name":"hereditary white nails","type":"related"},{"name":"total leukonychia","type":"related"}],"termid":"MONDO:0016557","xrefs":{"Monarch":{"xref_id":"0016557"}}}


id: PBO:0031805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G1/S_phase_transition","termid":"PBO:0031805"}


id: GO:0051629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of epinephrine uptake","termid":"GO:0051627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"inhibition of epinephrine uptake","synonyms":[{"name":"inhibition of adrenaline uptake","type":"exact"},{"name":"inhibition of epinephrine import","type":"exact"}],"termid":"GO:0051629"}


id: PBO:0073771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 4","termid":"PBO:0073771"}


id: PBO:0040577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B9 domain containing 2","termid":"PBO:0040577"}


id: SO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is mono-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_monomethylation_site","synonyms":[{"name":"H2K27 mono-methylation site","type":"exact"},{"name":"H2K27Me1","type":"related"}],"termid":"SO:0001708"}


id: GO:0035718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the cytokine, macrophage migration inhibitory factor.","definition_xrefs":["PMID:19601712","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"macrophage migration inhibitory factor binding","synonyms":[{"name":"MIF binding","type":"exact"}],"termid":"GO:0035718"}


id: PBO:0005287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-GATA type (predicted)","termid":"PBO:0005287"}


id: PBO:0075339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORCS3 antisense RNA 1","termid":"PBO:0075339"}


id: PR:Q10496
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TBC1 domain family member 2B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.09","secondary_identifiers":["UniProtKB:Q10496"],"synonyms":[{"name":"SPAC26F1.09","type":"related"},{"name":"Spom972h-TBC1D2B","type":"exact"}],"termid":"PR:Q10496"}


id: GO:0043169
data:
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id: MONDO:0010001
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id: PBO:0108549
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id: GO:0085006
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id: PBO:0029162
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id: PBO:0088824
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id: MONDO:0060766
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id: MONDO:0014161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux 7","secondary_identifiers":["UMLS:C3809337","MEDGEN:815667","GARD:18424","OMIM:615390"],"synonyms":[{"name":"VUR7","type":"exact"},{"name":"vesicoureteral reflux 7","type":"exact"}],"termid":"MONDO:0014161","xrefs":{"Monarch":{"xref_id":"0014161"}}}


id: PBO:0029271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029271"}


id: PBO:0088969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2H2-type, human ZNF277 ortholog, implicated in transcriptional regulation","termid":"PBO:0088969"}


id: MONDO:0015358
data:
  {"annotated_genes":["SJAG_00252","SJAG_00031","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011002"},{"annotations":[87281,87282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032792"}]},"cv_name":"mondo","definition":"A group of slowly progressive inherited disorders affecting motor and sensory peripheral nerves. Subtypes include HMSNs I-VII. HMSN I and II both refer to CHARCOT-MARIE-Tooth DISEASE. HMSN III refers to hypertrophic neuropathy of infancy. HMSN IV refers to REFSUM DISEASE. HMSN V refers to a condition marked by a hereditary motor and sensory neuropathy associated with spastic paraplegia (see SPASTIC PARAPLEGIA, HEREDITARY). HMSN VI refers to HMSN associated with an inherited optic atrophy (OPTIC ATROPHIES, HEREDITARY), and HMSN VII refers to HMSN associated with retinitis pigmentosa. (From Adams et al., Principles of Neurology, 6th ed, p1343)","definition_xrefs":["MESH:D015417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00252":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary motor and sensory neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:140450","icd11.foundation:1538134578","SCTID:398100001","NANDO:2200855","MEDGEN:45066","UMLS:C0027888","GARD:12685"],"synonyms":[{"name":"HMSN","type":"exact"}],"termid":"MONDO:0015358","terms_by_termid":{"MONDO:0011002":null,"MONDO:0032792":null},"xrefs":{"Monarch":{"xref_id":"0015358"}}}


id: FYPO:0001262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which the cell diameter is larger than normal and the cell length is shorter than normal, during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete stubby cell during cellular hyperosmotic response (obsolete FYPO:0001262)","synonyms":[{"name":"stubby cell during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"stubby cell during cellular hyperosmotic response during vegetative growth","type":"exact"},{"name":"watermelon-shaped cell during cellular hyperosmotic response","type":"exact"}],"termid":"FYPO:0001262"}


id: MONDO:0013715
data:
  {"annotated_genes":["SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85977],"is_not":false,"summary":null,"term":"MONDO:0013715"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the SIGMAR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile amyotrophic lateral sclerosis","termid":"MONDO:0017593"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614373","DOID:0060207","GARD:15794","UMLS:C3280587","MEDGEN:482217"],"synonyms":[{"name":"ALS16","type":"exact"},{"name":"SIGMAR1 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 16","type":"exact"},{"name":"amyotrophic lateral sclerosis 16, juvenile","type":"related"},{"name":"amyotrophic lateral sclerosis caused by mutation in SIGMAR1","type":"exact"}],"termid":"MONDO:0013715","terms_by_termid":{"MONDO:0013715":null},"xrefs":{"Monarch":{"xref_id":"0013715"}}}


id: GO:0032809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane of a neuron cell body - excludes the plasma membrane of cell projections such as axons and dendrites.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body membrane","termid":"GO:0044298"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"neuronal cell body membrane","synonyms":[{"name":"neuron cell body membrane","type":"exact"},{"name":"neuronal cell soma membrane","type":"exact"}],"termid":"GO:0032809"}


id: MONDO:0014806
data:
  {"annotated_genes":["SJAG_02096"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86134],"is_not":false,"summary":null,"term":"MONDO:0014806"}]},"cv_name":"mondo","definition":"Any prenatal-onset spinal muscular atrophy with congenital bone fractures in which the cause of the disease is a mutation in the TRIP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenatal-onset spinal muscular atrophy with congenital bone fractures","termid":"MONDO:0000209"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy with congenital bone fractures 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225177","GARD:4947","OMIM:271225","MEDGEN:896011","OMIM:616866","MESH:C564805"],"synonyms":[{"name":"SMA1 with congenital bone fractures","type":"related"},{"name":"SMABF1","type":"exact"},{"name":"TRIP4 prenatal-onset spinal muscular atrophy with congenital bone fractures","type":"exact"},{"name":"prenatal-onset spinal muscular atrophy with congenital bone fractures caused by mutation in TRIP4","type":"exact"},{"name":"spinal muscular atrophy type 1 with congenital bone fractures","type":"related"},{"name":"spinal muscular atrophy with congenital bone fractures 1","type":"exact"},{"name":"spinal muscular atrophy with congenital bone fractures type 1","type":"exact"},{"name":"spinal muscular atrophy, type I, with congenital bone fractures","type":"exact"}],"termid":"MONDO:0014806","terms_by_termid":{"MONDO:0014806":null},"xrefs":{"Monarch":{"xref_id":"0014806"}}}


id: MONDO:0019531
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87185],"is_not":false,"summary":null,"term":"MONDO:0019531"}]},"cv_name":"mondo","definition":"Haemolytic anemia due to glutathione reductase (GSR) deficiency is characterized by nearly complete absence of GSR activity in erythrocytes.","definition_xrefs":["Orphanet:90030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0002280","MONDO:0019241"],"is_obsolete":false,"name":"hemolytic anemia due to glutathione reductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618660","MONDO:0032856","MEDGEN:1684855","UMLS:C5231513","GARD:16784"],"synonyms":[{"name":"HEMOLYTIC ANEMIA DUE TO GLUTATHIONE REDUCTASE DEFICIENCY","type":"related"}],"termid":"MONDO:0019531","terms_by_termid":{"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0019531"}}}


id: PBO:0045866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1AKMT4-ECE2 readthrough","termid":"PBO:0045866"}


id: PBO:0069764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1047, pseudogene","termid":"PBO:0069764"}


id: FYPO:0002160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cilofungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on echinocandin","termid":"FYPO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on cilofungin","synonyms":[{"name":"normal cell population growth in presence of cilofungin","type":"exact"},{"name":"normal cell population growth on cilofungin","type":"exact"},{"name":"normal cellular response to cilofungin","type":"related"},{"name":"normal vegetative cell population growth on cilofungin","type":"exact"}],"termid":"FYPO:0002160"}


id: RO:0002150
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"X continuous_with Y if and only if X and Y share a fiat boundary.","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"continuous_with","termid":"RO:0002150"}


id: PBO:0086769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; similar to transcriptional regulators from the Zn[2]-Cys[6] binuclear cluster protein family; mRNA is weakly cell cycle regulated, peaking in S phase; induced rapidly upon MMS treatment","termid":"PBO:0086769"}


id: MONDO:0005003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic inflammatory process causing damage and fibrosis of the pancreatic parenchyma. Signs and symptoms include abdominal pain, malabsorption and diabetes mellitus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatitis","termid":"MONDO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic pancreatitis","secondary_identifiers":["MEDGEN:101753","MESH:D050500","icd11.foundation:1758007371","NCIT:C84637","UMLS:C0149521","SCTID:235494005","ICD9:577.1","EFO:0000342"],"synonyms":[{"name":"pancreatitis, chronic","type":"exact"}],"termid":"MONDO:0005003","xrefs":{"Monarch":{"xref_id":"0005003"}}}


id: GO:0047474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acid + ATP + L-cysteinyl-[protein] = AMP + diphosphate + S-(long-chain fatty acyl)-L-cysteinyl-[protein]. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["EC:6.2.1.19","MetaCyc:6.2.1.19-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty acid--protein ligase activity","secondary_identifiers":["RHEA:20101"],"synonyms":[{"name":"acyl-protein synthetase activity","type":"related"},{"name":"long-chain fatty acid luciferin component ligase activity","type":"exact"},{"name":"long-chain-fatty-acid luciferin component ligase activity","type":"exact"},{"name":"long-chain-fatty-acid-luciferin-component ligase activity","type":"exact"},{"name":"long-chain-fatty-acid:protein ligase (AMP-forming)","type":"related"}],"termid":"GO:0047474"}


id: MONDO:0009108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperdibasic aminoaciduria, type 1 is characterized by increased renal clearance of lysine, ornithine and arginine, in the presence of normal concentrations of cystine. Heterozygous individuals are asymptomatic but homozygotes display intellectual deficit. To date, 25 heterozygotes and one homozygote have been reported.","definition_xrefs":["Orphanet:1032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hyperdibasic aminoaciduria type 1","secondary_identifiers":["GARD:1854","MESH:C567132","icd11.foundation:1522058907","UMLS:C2673736","MEDGEN:435997","OMIM:222690"],"synonyms":[{"name":"dibasic amino aciduria 1","type":"related"},{"name":"dibasic amino aciduria I","type":"related"},{"name":"dibasic amino aciduria type 1","type":"exact"},{"name":"dibasic aminoaciduria 1","type":"related"}],"termid":"MONDO:0009108","xrefs":{"Monarch":{"xref_id":"0009108"}}}


id: SO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute describing sequence that has been integrated with foreign sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgenic","termid":"SO:0000781"}


id: GO:1903534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["GO_REF:0000058","PMID:12018418","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of lactose biosynthetic process","synonyms":[{"name":"regulation of lactose anabolism","type":"exact"},{"name":"regulation of lactose biosynthesis","type":"exact"},{"name":"regulation of lactose formation","type":"exact"},{"name":"regulation of lactose synthesis","type":"exact"}],"termid":"GO:1903534"}


id: MONDO:0004025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinal cord embryonal tumor, not otherwise specified (obsolete MONDO:0004025)","termid":"MONDO:0004025","xrefs":{"Monarch":{"xref_id":"0004025"}}}


id: PBO:0046131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4H pseudogene 1","termid":"PBO:0046131"}


id: PBO:0063130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 15","termid":"PBO:0063130"}


id: MOD:01220
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9254591","Unimod:286#E","PubMed:15121203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), heavy C13","termid":"MOD:00606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13 - site E","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:01220"}


id: SO:0001386
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified glycine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_glycine","secondary_identifiers":["MOD:00908"],"synonyms":[{"name":"ModGly","type":"exact"},{"name":"modified glycine","type":"exact"}],"termid":"SO:0001386"}


id: PBO:0027221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_present_in_increased_numbers","termid":"PBO:0027221"}


id: GO:0008633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conversion of proteins that induce or sustain apoptosis to an active form.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of pro-apoptotic gene products (obsolete GO:0008633)","synonyms":[{"name":"activation of pro-apoptotic gene products","type":"exact"},{"name":"induction of pro-apoptotic gene products","type":"related"}],"termid":"GO:0008633"}


id: PBO:0003733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein Mdm34 (predicted)","termid":"PBO:0003733"}


id: GO:0016154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrimidine nucleoside + phosphate = pyrimidine + alpha-D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"pyrimidine-nucleoside phosphorylase activity","synonyms":[{"name":"Py-NPase activity","type":"related"},{"name":"pyrimidine-nucleoside:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0016154"}


id: GO:0046215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of siderophores, low molecular weight Fe(III)-chelating substances made by aerobic or facultatively anaerobic bacteria, especially when growing under iron deficient conditions. The complexes of Fe(3+)-siderophores have very high stability constants and are taken up by specific transport systems by microorganisms; the subsequent release of iron requires enzymatic action.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"siderophore catabolic process","synonyms":[{"name":"siderochrome catabolism","type":"narrow"},{"name":"siderophore breakdown","type":"exact"},{"name":"siderophore catabolism","type":"exact"},{"name":"siderophore degradation","type":"exact"}],"termid":"GO:0046215"}


id: FYPO:0007137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell has an abnormally low volume and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"small vegetative cell","termid":"FYPO:0000645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"small multinucleate vegetative cell","synonyms":[{"name":"small multinucleate cell during vegetative growth","type":"exact"},{"name":"small multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007137"}


id: PBO:0077198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 4 L six family member 4","termid":"PBO:0077198"}


id: PBO:0066464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 2","termid":"PBO:0066464"}


id: PomGeneEx:0000021
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"present","termid":"PomGeneEx:0000005"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein present","synonyms":[{"name":"protein expression present","type":"exact"}],"termid":"PomGeneEx:0000021"}


id: PBO:0116968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein, translation activator for Cox1 Ppr4","termid":"PBO:0116968"}


id: GO:0002160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of a desmosome. A desmosome is a patch-like intercellular junctions found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an interspace of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["GOC:hjd","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desmosome organization","termid":"GO:0002934"},{"relation_name":"is_a","term_name":"cell-cell junction maintenance","termid":"GO:0045217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"desmosome maintenance","termid":"GO:0002160"}


id: PATO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being distributed or spread over a considerable extent.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispersed","termid":"PATO:0001630"}


id: PBO:0088114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aspartyl protease (proteinase A); required for posttranslational precursor maturation of vacuolar proteinases; important for protein turnover after oxidative damage; plays a protective role in acetic acid induced apoptosis; synthesized as a zymogen, self-activates","termid":"PBO:0088114"}


id: GO:0045646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of erythrocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"regulates","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte differentiation","synonyms":[{"name":"regulation of RBC differentiation","type":"exact"},{"name":"regulation of red blood cell differentiation","type":"exact"}],"termid":"GO:0045646"}


id: MONDO:0004885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic choroid disorder","termid":"MONDO:0001898"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"choroidal sclerosis","secondary_identifiers":["MESH:C535358","MEDGEN:137998","SCTID:406446000","ICD9:363.40","DOID:980","UMLS:C0344297","ICD9:363.4"],"synonyms":[{"name":"choroidal degenerations","type":"exact"},{"name":"neurodegenerative disease of optic choroid","type":"exact"},{"name":"optic choroid neurodegenerative disease","type":"exact"}],"termid":"MONDO:0004885","xrefs":{"Monarch":{"xref_id":"0004885"}}}


id: GO:0032396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I protein complex to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["PMID:11858820","PMID:9368779","PMID:9597134","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I receptor activity","termid":"GO:0032393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}


id: MONDO:0017111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Dandy-Walker syndrome","termid":"MONDO:0009072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated Dandy-Walker malformation without hydrocephalus","secondary_identifiers":["Orphanet:269215","MEDGEN:1842486","GARD:20994","UMLS:C5680778"],"termid":"MONDO:0017111","xrefs":{"Monarch":{"xref_id":"0017111"}}}


id: FYPO:0003638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ADP binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ADP binding","termid":"FYPO:0003637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased ADP binding","termid":"FYPO:0003638"}


id: PBO:0086675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RDN5-2; YLR154C-H has a paralog, YLR157C-C, that arose from a segmental duplication","termid":"PBO:0086675"}


id: PBO:0055944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC52 antisense RNA 1","termid":"PBO:0055944"}


id: PBO:0038452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AARSD1 pseudogene 1","termid":"PBO:0038452"}


id: GO:0170045
data:
  {"annotated_genes":["SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100567],"is_not":false,"summary":null,"term":"GO:0170045"}]},"cv_name":"molecular_function","definition":"Enables the transfer of isopentenyl pyrophosphate from one side of a membrane to the other.","definition_xrefs":["PMID:37813972","GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"isopentenyl pyrophosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IPP transmembrane transport activity","type":"exact"},{"name":"isopentenyl diphosphate transmembrane transport activity","type":"exact"}],"termid":"GO:0170045","terms_by_termid":{"GO:0170045":null}}


id: PBO:0047928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(q14.2)","termid":"PBO:0047928"}


id: PBO:0057739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1469","termid":"PBO:0057739"}


id: MONDO:0040500
data:
  {"annotated_genes":["SJAG_04119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85411],"is_not":false,"summary":null,"term":"MONDO:0040500"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0002320","MONDO:0024322","MONDO:0037792","MONDO:0006025"],"is_obsolete":false,"name":"glycosylphosphatidylinositol biosynthesis defect 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22577","DOID:0081223","MEDGEN:1628197","UMLS:C4540521","OMIM:617816"],"synonyms":[{"name":"GPIBD16","type":"related"},{"name":"glycosylphosphatidylinositol biosynthesis defect 16","type":"exact"},{"name":"intellectual disability, autosomal recessive 62","type":"related"},{"name":"mental retardation, autosomal recessive 62","type":"related"}],"termid":"MONDO:0040500","terms_by_termid":{"MONDO:0040500":null},"xrefs":{"Monarch":{"xref_id":"0040500"}}}


id: MONDO:0018233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Otopalatodigital syndrome spectrum disorder is a primary bone dysplasia and encompasses a group of congenital anomalies that are characterized by skeletal dysplasia of varying clinical severity and an X linked dominant pattern of inheritance. This group include otopalatodigital syndrome type 1 and 2 (OPD1, OPD2) which are characterized in affected males by cleft palate, conductive hearing loss, craniofacial abnormalities and skeletal dysplasia; Melnick-Needles syndrome (MNS) which displays skeletal deformities in females and embryonic or perinatal lethality in most males; frontometaphyseal dysplasia (FMD); and terminal osseous dysplasia - pigmentary defects.","definition_xrefs":["Orphanet:364541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome spectrum disorder","secondary_identifiers":["DOID:0111782","GARD:21570","MEDGEN:411701","UMLS:C2748918"],"synonyms":[{"name":"OPD spectrum disorder","type":"exact"},{"name":"OPSD","type":"exact"}],"termid":"MONDO:0018233","xrefs":{"Monarch":{"xref_id":"0018233"}}}


id: GO:0102571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-O-(N-acetyl-beta-D-glucosaminyl)-L-seryl/L-threonyl-[protein] + H2O = L-seryl//L-threonyl-[protein] + N-acetyl-D-glucosamine.","definition_xrefs":["EC:3.2.1.169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"[protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity","secondary_identifiers":["MetaCyc:RXN-15215"],"termid":"GO:0102571"}


id: SO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is bound by a nucleic acid.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"bound_by_nucleic_acid","termid":"SO:0000876"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_bound_by_nucleic_acid","synonyms":[{"name":"transcript bound by nucleic acid","type":"exact"}],"termid":"SO:0000278"}


id: PBO:0070574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 40","termid":"PBO:0070574"}


id: MONDO:0032876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with absent language and variable seizures","secondary_identifiers":["OMIM:618707","UMLS:C5231469","MEDGEN:1684803"],"synonyms":[{"name":"Ito-Raymond Syndrome","type":"related"},{"name":"NEDALVS","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH ABSENT LANGUAGE AND VARIABLE SEIZURES","type":"related"}],"termid":"MONDO:0032876","xrefs":{"Monarch":{"xref_id":"0032876"}}}


id: GO:0019203
data:
  {"annotated_genes":["SJAG_01862","SJAG_00685","SJAG_05314","SJAG_02713","SJAG_00039","SJAG_01646"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73391,76356,75355,79201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004331"},{"annotations":[74241,80232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004805"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: carbohydrate phosphate + H2O = carbohydrate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00685":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02713":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"carbohydrate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-3781011","Reactome:R-HSA-3781018","Reactome:R-HSA-3791349"],"termid":"GO:0019203","terms_by_termid":{"GO:0004331":null,"GO:0004805":null}}


id: PBO:0111846
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ranBP","termid":"PBO:0111846"}


id: PBO:0117166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP152 antisense RNA 1","termid":"PBO:0117166"}


id: GO:0097562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the anterior and ventral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["GOC:giardia","PMID:5961344","PMID:16607022","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left lateral basal body pair","termid":"GO:0097562"}


id: PBO:0091299
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CRD1","termid":"PBO:0091299"}


id: PBO:0082223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex; ubiquitin-binding adaptor involved in intracellular amino acid permease sorting, functions in heat shock element mediated gene expression, essential for growth in stress conditions; BUL2 has a paralog, BUL1, that arose from the whole genome duplication","termid":"PBO:0082223"}


id: GO:0050158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + NADP+ = H+ + NADPH + orotate.","definition_xrefs":["RHEA:14861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.3.1.15","KEGG_REACTION:R01866","MetaCyc:OROTATE-REDUCTASE-NADPH-RXN"],"synonyms":[{"name":"(S)-dihydroorotate:NADP+ oxidoreductase activity","type":"related"},{"name":"L-5,6-dihydro-orotate:NAD oxidoreductase activity","type":"related"},{"name":"dihydro-orotic dehydrogenase activity","type":"related"},{"name":"orotate reductase (NADPH) activity","type":"exact"},{"name":"orotate reductase activity","type":"related"}],"termid":"GO:0050158"}


id: RO:HOM0000006
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homology that is defined by similarity with regard to selected structural parameters.","definition_xrefs":["ISBN:0123195837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homology_relationship_with","termid":"RO:HOM0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_structural_homology_relationship_with","synonyms":[{"name":"idealistic homology","type":"related"},{"name":"structural homologous to","type":"exact"}],"termid":"RO:HOM0000006"}


id: PBO:0082066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase; catalyzes the last of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; mutants are sterol auxotrophs; mutation is functionally complemented by human HSD17B7","termid":"PBO:0082066"}


id: MONDO:0002398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adenofibroma characterized by the presence of epithelial cells which contain intracytoplasmic mucin and a fibrotic stroma. A representative example is the ovarian mucinous adenofibroma. Cases with epithelial atypia described in the ovary lacking stromal invasion are designated as borderline mucinous adenofibromas and have a low grade malignant potential.","definition_xrefs":["NCIT:C8978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"},{"relation_name":"is_a","term_name":"mucinous neoplasm","termid":"MONDO:0024338"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucinous adenofibroma","secondary_identifiers":["MEDGEN:83158","DOID:2700","ICDO:9015/0","UMLS:C0334499"],"synonyms":[{"name":"mucinous adenofibroma","type":"exact"}],"termid":"MONDO:0002398","xrefs":{"Monarch":{"xref_id":"0002398"}}}


id: GO:0032121
data:
  {"annotated_genes":["SJAG_01777","SJAG_05260","SJAG_05196","SJAG_03092","SJAG_03287"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87715,90087,100246,103138,105429],"is_not":false,"summary":null,"term":"GO:0032121"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle process in which physical connections are formed between telomeric heterochromatin and the spindle pole body, facilitating bouquet formation.","definition_xrefs":["GOC:pr","PMID:16615890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_05196":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"meiotic attachment of telomeric heterochromatin to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to spindle pole body","type":"broad"},{"name":"attachment of telomeric chromatin to spindle pole body","type":"broad"}],"termid":"GO:0032121","terms_by_termid":{"GO:0032121":null}}


id: GO:0034338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion, where the carboxylic chain has 8 or fewer carbon atoms.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"short-chain carboxylesterase activity","synonyms":[{"name":"butyrate esterase activity","type":"narrow"},{"name":"butyryl esterase activity","type":"narrow"},{"name":"methylbutyrase activity","type":"narrow"},{"name":"methylbutyrate esterase activity","type":"narrow"},{"name":"monobutyrase activity","type":"narrow"},{"name":"propionyl esterase activity","type":"narrow"},{"name":"short-chain esterase activity","type":"broad"}],"termid":"GO:0034338"}


id: GO:0045205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAP kinase into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ebc","ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK transporter activity (obsolete GO:0045205)","synonyms":[{"name":"MAPK transporter activity","type":"exact"}],"termid":"GO:0045205"}


id: MONDO:0044083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Opportunistic fungal infection by a member of Alternaria genus.","definition_xrefs":["MESH:D060487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternariosis","secondary_identifiers":["UMLS:C3178962","MEDGEN:465430","SCTID:238436005"],"synonyms":[{"name":"Alternarioses","type":"related"},{"name":"Alternarioses, cutaneous","type":"related"},{"name":"Alternarioses, dermal","type":"related"},{"name":"Alternarioses, subcutaneous","type":"related"},{"name":"Alternariosis, cutaneous","type":"related"},{"name":"Alternariosis, dermal","type":"related"},{"name":"Alternariosis, subcutaneous","type":"related"},{"name":"cutaneous Alternarioses","type":"related"},{"name":"cutaneous Alternariosis","type":"related"},{"name":"cutaneous alternariosis","type":"exact"},{"name":"dermal Alternarioses","type":"related"},{"name":"dermal Alternariosis","type":"related"},{"name":"subcutaneous Alternarioses","type":"related"},{"name":"subcutaneous Alternariosis","type":"related"}],"termid":"MONDO:0044083","xrefs":{"Monarch":{"xref_id":"0044083"}}}


id: GO:0044357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of rRNA molecules to degradation. Includes processes that both stabilize and destabilize rRNAs.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"regulation of rRNA catabolic process","termid":"GO:1902374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of rRNA stability","synonyms":[{"name":"regulation of ribosomal RNA stability","type":"exact"}],"termid":"GO:0044357"}


id: GO:0033184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone ubiquitination (obsolete GO:0033184)","termid":"GO:0033184"}


id: PBO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF890 family protein","termid":"PBO:0002565"}


id: GO:0035487
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98504],"is_not":false,"summary":null,"term":"GO:0035487"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a T/T mispair.","definition_xrefs":["GOC:jh","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thymine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"T/T mispair binding","type":"exact"}],"termid":"GO:0035487","terms_by_termid":{"GO:0035487":null}}


id: GO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thyroid hormone receptor signaling pathway","termid":"GO:0002155"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"thyroid hormone receptor signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of thyroid hormone receptor signaling pathway","synonyms":[{"name":"positive regulation of thyroid hormone mediated signaling pathway","type":"exact"},{"name":"positive regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002157"}


id: PBO:0028884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_methylation","termid":"PBO:0028884"}


id: PBO:0034114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_III_bouton","termid":"PBO:0034114"}


id: MONDO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the skull.","direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"skull cancer","secondary_identifiers":["NCIT:C155790","DOID:1863","MEDGEN:1662558","SCTID:126538005","UMLS:C2062986"],"synonyms":[{"name":"cancer of skull","type":"exact"},{"name":"malignant neoplasm of skull","type":"exact"},{"name":"malignant skull neoplasm","type":"exact"},{"name":"skull cancer","type":"exact"}],"termid":"MONDO:0002132","xrefs":{"Monarch":{"xref_id":"0002132"}}}


id: PBO:0028697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_degradation_of_middle_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0028697"}


id: GO:0045434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the receptiveness of a female to male advances subsequent to mating.","definition_xrefs":["PMID:11092827","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of female receptivity","termid":"GO:0007621"},{"relation_name":"is_a","term_name":"regulation of female receptivity, post-mating","termid":"GO:0046008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of female receptivity, post-mating","synonyms":[{"name":"down regulation of female receptivity, post-mating","type":"exact"},{"name":"down-regulation of female receptivity, post-mating","type":"exact"},{"name":"downregulation of female receptivity, post-mating","type":"exact"},{"name":"inhibition of female receptivity, post-mating","type":"narrow"}],"termid":"GO:0045434"}


id: MONDO:0007899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic inflammatory process affecting the skin. It is characterized by the presence of white, indurated plaques, epidermal atrophy, and fibrosis of the upper dermis. It usually appears in the vulva and penis.","definition_xrefs":["NCIT:C26817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen sclerosus et atrophicus","secondary_identifiers":["SCTID:25674000","UMLS:C0023652","Orphanet:33409","MEDGEN:7338","ICD10CM:L90.0","MESH:D018459","OMIM:151590"],"synonyms":[{"name":"LSA","type":"related"},{"name":"lichen SCLEROSUS ET ATROPHICUS","type":"related"},{"name":"lichen sclerosis","type":"related"},{"name":"lichen sclerosis et atrophicus","type":"related"},{"name":"lichen sclerosus","type":"related"},{"name":"lichen sclerosus et atrophicus","type":"exact"}],"termid":"MONDO:0007899","xrefs":{"Monarch":{"xref_id":"0007899"}}}


id: PBO:0087605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; involved in histone acylation; probable pantetheine-phosphate adenylyltransferase (PPAT); PPAT catalyzes the fourth step in the biosynthesis of coenzyme A from pantothenate; null mutant lethality is complemented by E. coli coaD (encoding PPAT) and by human COASY","termid":"PBO:0087605"}


id: GO:0015055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with secretin to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"secretin receptor activity","termid":"GO:0015055"}


id: PBO:0060266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYG1 pseudogene 1","termid":"PBO:0060266"}


id: GO:0120520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-saturated fatty acid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (R)-2-hydroxy fatty acid + 2 Fe(III)-[cytochrome b5] + H2O. Note that the substrate is a free fatty acid, not a fatty acyl chain within a sphingolipid.","definition_xrefs":["GOC:sjm","RHEA:38855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid 2-hydroxylase activity","termid":"GO:0080132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"free fatty acid 2-hydroxylase activity","termid":"GO:0120520"}


id: PBO:0058314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4687","termid":"PBO:0058314"}


id: PBO:0086002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to predicted tyrosine phosphatases Oca1p and Siw14p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YNL056W is not an essential gene","termid":"PBO:0086002"}


id: MONDO:0009836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatitis, sclerosing cholangitis, and sicca complex","secondary_identifiers":["UMLS:C1850080","MEDGEN:340461","MESH:C564906","OMIM:260480"],"synonyms":[{"name":"pancreatitis, sclerosing cholangitis, and sicca complex","type":"exact"}],"termid":"MONDO:0009836","xrefs":{"Monarch":{"xref_id":"0009836"}}}


id: GO:0005763
data:
  {"annotated_genes":["SJAG_02359","SJAG_01520","SJAG_00060","SJAG_01468","SJAG_03065","SJAG_04281","SJAG_03584","SJAG_04753","SJAG_00944","SJAG_04164","SJAG_00513","SJAG_00782","SJAG_00105","SJAG_04788","SJAG_04494","SJAG_02452","SJAG_01767","SJAG_05320","SJAG_00889","SJAG_02201","SJAG_00148","SJAG_00628","SJAG_04173","SJAG_02643","SJAG_03053","SJAG_02067","SJAG_04378","SJAG_04918","SJAG_01734","SJAG_02777","SJAG_00860","SJAG_02324"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72722,72947,73583,74455,74565,76185,76834,78722,90254,92400,94514,94812,96246,96950,98307,98308,98539,102630,103399,104320,106361,106722,108402,108661,108909,110458,110711,110991,112691,115919,116342,118411],"is_not":false,"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"The smaller of the two subunits of a mitochondrial ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar small ribosomal subunit","termid":"GO:0000314"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial ribosome","termid":"GO:0005761"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01468":null,"SJAG_01520":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_02067":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02777":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03584":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04494":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04918":null,"SJAG_05320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial small ribosomal subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"28S ribosomal subunit, mitochondrial","type":"narrow"},{"name":"mitochondrial ribosomal SSU complex","type":"exact"},{"name":"mitochondrial ribosomal small subunit complex","type":"exact"}],"termid":"GO:0005763","terms_by_termid":{"GO:0005763":null}}


id: GO:0072492
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the host cell mitochondrial envelope.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell mitochondrial envelope","termid":"GO:0044190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial intermembrane space","termid":"GO:0072492"}


id: MONDO:0017250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 2","secondary_identifiers":["GARD:21095","UMLS:C5437761","icd11.foundation:1921224131","MEDGEN:1738105","Orphanet:280840"],"synonyms":[{"name":"CCAM type 2","type":"exact"},{"name":"CPAM type 2","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 2","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 2","type":"exact"},{"name":"congenital cystic disease of the lung type 2","type":"exact"}],"termid":"MONDO:0017250","xrefs":{"Monarch":{"xref_id":"0017250"}}}


id: GO:0035321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that hairs in the imaginal disc-derived wing continue to point distally during development, following the initial establishment of wing hair polarity.","definition_xrefs":["GOC:mtg_sensu","PMID:15501220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of imaginal disc-derived wing hair orientation","synonyms":[{"name":"maintenance of wing hair orientation","type":"exact"}],"termid":"GO:0035321"}


id: GO:0036375
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An apical protein complex that contains the proteins Kibra, Expanded and Merlin (Mer), or orthologs thereof. In humans, the complex contains KIBRA, FDM6 and NF2.","definition_xrefs":["PMID:20159598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Kibra-Ex-Mer complex","synonyms":[{"name":"KEM complex","type":"exact"},{"name":"Kbr, Ex and Mer complex","type":"exact"}],"termid":"GO:0036375"}


id: PBO:0062300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 11","termid":"PBO:0062300"}


id: GO:0097667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Rcy1 in S. cerevisiae (Pof6 in S. pombe).","definition_xrefs":["GOC:vw","PMID:15147268","PMID:14747994","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Rcy1/Pof6 ubiquitin ligase complex","termid":"GO:0097667"}


id: FYPO:0004945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of nigericin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to nigericin","synonyms":[{"name":"resistance to nigericin during mitotic cell cycle","type":"related"},{"name":"resistance to nigericin during vegetative growth","type":"exact"},{"name":"resistant to nigericin","type":"exact"}],"termid":"FYPO:0004945"}


id: GO:0010853
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an enzyme that catalyzes a ring closure reaction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"},{"relation_name":"positively_regulates","term_name":"cyclase activity","termid":"GO:0009975"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"positively_regulates","termid":"GO:0009975"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003824","GO:0030234","GO:0098772","GO:0009975","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"cyclase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010853","terms_by_termid":{"GO:0010856":null}}


id: MONDO:0004568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ileus caused by abdominal or pelvic surgery, infections, disorders that affect the muscles and nerves, and medications. Signs and symptoms include those of intestinal obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ileus","termid":"MONDO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"paralytic ileus","secondary_identifiers":["ICD9:560.1","SCTID:55525008","HP:0002590","icd11.foundation:1868011045","MEDGEN:18293","UMLS:C0030446","NCIT:C93045","DOID:8442","MESH:D007418"],"synonyms":[{"name":"paralytic ileus","type":"exact"},{"name":"paralytic ileus (disease)","type":"exact"}],"termid":"MONDO:0004568","xrefs":{"Monarch":{"xref_id":"0004568"}}}


id: PBO:0017697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylceramide biosynthesis protein Cwh43 (predicted)","termid":"PBO:0017697"}


id: GO:0070234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell death by apoptotic process.","definition_xrefs":["ISBN:0781765196","GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte apoptotic process","termid":"GO:0070230"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"positively_regulates","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell apoptotic process","synonyms":[{"name":"activation of T cell apoptosis","type":"narrow"},{"name":"positive regulation of T cell apoptosis","type":"narrow"},{"name":"positive regulation of T lymphocyte apoptosis","type":"exact"},{"name":"positive regulation of T-cell apoptosis","type":"exact"},{"name":"positive regulation of T-lymphocyte apoptosis","type":"exact"},{"name":"positive regulation of programmed cell death of T cells by apoptosis","type":"exact"},{"name":"stimulation of T cell apoptosis","type":"narrow"},{"name":"up regulation of T cell apoptosis","type":"exact"},{"name":"up-regulation of T cell apoptosis","type":"exact"},{"name":"upregulation of T cell apoptosis","type":"exact"}],"termid":"GO:0070234"}


id: PATO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches freely branching toward the margin.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cladodromous","termid":"PATO:0001971"}


id: PBO:0065206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 38B","termid":"PBO:0065206"}


id: PBO:0052970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL histone methyl-lysine binding protein 1","termid":"PBO:0052970"}


id: PBO:0087417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 7 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; oriented facing the mitochondrial matrix; N-terminus appears to play a role in complex assembly","termid":"PBO:0087417"}


id: PBO:0074931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 98","termid":"PBO:0074931"}


id: PBO:0080908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma","termid":"PBO:0080908"}


id: MONDO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000528 (obsolete MONDO:0000528)","termid":"MONDO:0000528","xrefs":{"Monarch":{"xref_id":"0000528"}}}


id: GO:0035860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a glial cell-derived neurotrophic factor receptor.","definition_xrefs":["GOC:yaf","PMID:12953054","PMID:29245123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"GDNF receptor signaling pathway","type":"exact"},{"name":"glial cell derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"glial cell line-derived neurotrophic factor receptor signalling pathway","type":"exact"},{"name":"glial cell-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0035860"}


id: PBO:0004834
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypermethioninemia","termid":"PBO:0004834"}


id: PBO:0052402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 3","termid":"PBO:0052402"}


id: PBO:0074699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70I","termid":"PBO:0074699"}


id: MONDO:0007010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uveitis (obsolete MONDO:0007010)","termid":"MONDO:0007010","xrefs":{"Monarch":{"xref_id":"0007010"}}}


id: GO:0022601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of physiological phases, occurring in the endometrium during the menstrual cycle that recur at regular intervals during the reproductive years. The menstrual cycle is an ovulation cycle where the endometrium is shed if pregnancy does not occur.","definition_xrefs":["GOC:jid","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menstrual cycle phase","termid":"GO:0022601"}


id: PBO:0047828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP1 antisense RNA 1","termid":"PBO:0047828"}


id: GO:0090252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a wing epithelium undergo directed movement and contribute to imaginal disc-derived morphogenesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium migration","termid":"GO:0090132"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium migration involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090252"}


id: MONDO:0007357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colonic varices without portal hypertension","secondary_identifiers":["UMLS:C1852721","MEDGEN:343875","OMIM:120440","MESH:C565172"],"synonyms":[{"name":"colonic varices without portal hypertension","type":"exact"}],"termid":"MONDO:0007357","xrefs":{"Monarch":{"xref_id":"0007357"}}}


id: MOD:01867
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["OMSSA:210","Unimod:888#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ light","type":"related"},{"name":"mTRAQ light on Y","type":"exact"}],"termid":"MOD:01867"}


id: PBO:0069935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1228, pseudogene","termid":"PBO:0069935"}


id: PBO:0009639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-metabolizing bifunctional protein (predicted)","termid":"PBO:0009639"}


id: PR:Q9P7L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ornithine aminotransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine aminotransferase car2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.08c","secondary_identifiers":["UniProtKB:Q9P7L5"],"synonyms":[{"name":"Spom972h-OAT","type":"exact"},{"name":"ornithine--oxo-acid aminotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7L5"}


id: MONDO:0007621
data:
  {"annotated_genes":["SJAG_02571"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87254],"is_not":false,"summary":null,"term":"MONDO:0007621"}]},"cv_name":"mondo","definition":"Floating-Harbor syndrome is a genetic developmental disorder characterized by facial dysmorphism, short stature with delayed bone age, and expressive language delay.","definition_xrefs":["Orphanet:2044"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02571":null},"genotype_count":0,"is_obsolete":false,"name":"Floating-Harbor syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0729582","icd11.foundation:2101730645","GARD:6455","NORD:1151","ICD9:759.89","OMIM:136140","MESH:C537062","MEDGEN:152667","NCIT:C175241","DOID:0111358","SCTID:312214005"],"synonyms":[{"name":"FHS","type":"related"},{"name":"FLHS","type":"related"},{"name":"Floating Harbor Syndrome","type":"exact"},{"name":"Pelletier-Leisti syndrome","type":"related"},{"name":"floating-HARBOR syndrome","type":"exact"},{"name":"floating-Harbor syndrome","type":"exact"},{"name":"short stature with delayed bone age, expressive language delay, a triangular face with a prominent nose and deep-set eyes","type":"related"}],"termid":"MONDO:0007621","terms_by_termid":{"MONDO:0007621":null},"xrefs":{"Monarch":{"xref_id":"0007621"}}}


id: PBO:0041501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 75","termid":"PBO:0041501"}


id: GO:0051781
data:
  {"annotated_genes":["SJAG_00845","SJAG_04468","SJAG_00082","SJAG_03581","SJAG_04666","SJAG_03704","SJAG_01188","SJAG_04597","SJAG_02838","SJAG_05290","SJAG_03631","SJAG_02392","SJAG_01805","SJAG_03342","SJAG_03936","SJAG_04776","SJAG_01114","SJAG_00514","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94734,90322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[110851,94735,94904,113694,87849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[119786,111094,91093,104020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[113695,92742,105506,107370,94128,106711,118220,90192,78251,115801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[92743,94738,87850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"positively_regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"activation of cell division","type":"narrow"},{"name":"stimulation of cell division","type":"narrow"},{"name":"up regulation of cell division","type":"exact"},{"name":"up-regulation of cell division","type":"exact"},{"name":"upregulation of cell division","type":"exact"}],"termid":"GO:0051781","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: MONDO:0009088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, neural, with atypical atopic dermatitis","secondary_identifiers":["MEDGEN:346567","UMLS:C1857334","MESH:C565639","OMIM:221700"],"synonyms":[{"name":"deafness, neural, with atypical atopic dermatitis","type":"exact"}],"termid":"MONDO:0009088","xrefs":{"Monarch":{"xref_id":"0009088"}}}


id: GO:0010384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cell wall peptidoglycan, a group of glycoproteins that consist of a core-protein backbone O-glycosylated by one or more complex carbohydrates.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall proteoglycan metabolic process","synonyms":[{"name":"cell wall proteoglycan metabolism","type":"exact"}],"termid":"GO:0010384"}


id: GO:1900044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein K63-linked ubiquitination","synonyms":[{"name":"regulation of protein K63-linked polyubiquitination","type":"exact"}],"termid":"GO:1900044"}


id: MONDO:0009298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOMBO syndrome","secondary_identifiers":["MEDGEN:343515","MESH:C537284","OMIM:233270","UMLS:C1856274"],"synonyms":[{"name":"GOMBO syndrome","type":"exact"},{"name":"Growth retardation, ocular abnormalities, microcephaly, brachydactyly, and oligophrenia","type":"related"}],"termid":"MONDO:0009298","xrefs":{"Monarch":{"xref_id":"0009298"}}}


id: PBO:0080137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasohibin 1","termid":"PBO:0080137"}


id: MONDO:1012943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in cattle due to a mutation in the ANKRD28 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, ANKRD28-related, cattle","secondary_identifiers":["OMIA:002596-9913"],"termid":"MONDO:1012943","xrefs":{"Monarch":{"xref_id":"1012943"}}}


id: PBO:0040984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 2","termid":"PBO:0040984"}


id: PBO:0079201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 5","termid":"PBO:0079201"}


id: PBO:0088398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Snx3","termid":"PBO:0088398"}


id: GO:1905180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle tissue regeneration.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","GOC:BHF","PMID:23222520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue regeneration","termid":"GO:1905178"},{"relation_name":"positively_regulates","term_name":"cardiac muscle tissue regeneration","termid":"GO:0061026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle tissue regeneration","synonyms":[{"name":"activation of cardiac muscle tissue regeneration","type":"narrow"},{"name":"up regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"up-regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"upregulation of cardiac muscle tissue regeneration","type":"exact"}],"termid":"GO:1905180"}


id: PBO:0084200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone variant H2AZ; exchanged for histone H2A in nucleosomes by the SWR1 complex; involved in transcriptional regulation through prevention of the spread of silent heterochromatin; Htz1p-containing nucleosomes facilitate RNA Pol II passage by affecting correct assembly and modification status of RNA Pol II elongation complexes and by favoring efficient nucleosome remodeling","termid":"PBO:0084200"}


id: MONDO:0002078
data:
  {"annotated_genes":["SJAG_03703","SJAG_02730","SJAG_02431","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86292,86291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013567"},{"annotations":[85664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013011"},{"annotations":[86980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013770"},{"annotations":[86979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013769"}]},"cv_name":"mondo","definition":"A congenital disorder characterized by the presence of an abnormal communication between the atria or the ventricles of the heart due to defects in the cardiac septum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_02730":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart septal defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D006343","SCTID:253273004","MEDGEN:6752","DOID:1681","NCIT:C84482","UMLS:C0018816","ICD9:745.8","ICD9:745.9"],"synonyms":[{"name":"Cardiac septal defects","type":"exact"},{"name":"congenital septal defect","type":"exact"},{"name":"congenital septal defect of heart","type":"exact"},{"name":"holes in the heart","type":"exact"},{"name":"septal defect","type":"exact"}],"termid":"MONDO:0002078","terms_by_termid":{"MONDO:0013011":null,"MONDO:0013567":null,"MONDO:0013769":null,"MONDO:0013770":null},"xrefs":{"Monarch":{"xref_id":"0002078"}}}


id: GO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal tripeptide from a polypeptide at neutral pH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tripeptidyl-peptidase II activity (obsolete GO:0004294)","synonyms":[{"name":"tripeptidyl-peptidase II activity","type":"exact"}],"termid":"GO:0004294"}


id: PBO:0074094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 9","termid":"PBO:0074094"}


id: PBO:0067265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 339, pseudogene","termid":"PBO:0067265"}


id: GO:0050868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte activation","termid":"GO:0051250"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"negatively_regulates","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell activation","synonyms":[{"name":"down regulation of T cell activation","type":"exact"},{"name":"down-regulation of T cell activation","type":"exact"},{"name":"downregulation of T cell activation","type":"exact"},{"name":"inhibition of T cell activation","type":"narrow"},{"name":"negative regulation of T lymphocyte activation","type":"exact"},{"name":"negative regulation of T-cell activation","type":"exact"},{"name":"negative regulation of T-lymphocyte activation","type":"exact"}],"termid":"GO:0050868"}


id: GO:2001064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cellooligosaccharide binding","termid":"GO:2001064"}


id: PBO:0005473
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nbs1-Interacting Protein 1","termid":"PBO:0005473"}


id: GO:0048887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cupula development","termid":"GO:0048887"}


id: MONDO:0009953
data:
  {"annotated_genes":["SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85942],"is_not":false,"summary":null,"term":"MONDO:0009953"}]},"cv_name":"mondo","definition":"Leukocyte adhesion deficiency type II (LAD-II) is a form of LAD characterized by recurrent bacterial infections, severe growth delay and severe intellectual deficit.","definition_xrefs":["Orphanet:99843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency","termid":"MONDO:0017570"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025","MONDO:0005570","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"leukocyte adhesion deficiency type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080492","UMLS:C0398739","MESH:C535755","OMIM:266265","MEDGEN:96022","DOID:0070255","GARD:4634","SCTID:234583001","NCIT:C4690"],"synonyms":[{"name":"CDG 2C","type":"related"},{"name":"CDG IIc","type":"exact"},{"name":"CDG syndrome type IIc","type":"exact"},{"name":"CDG-IIc","type":"exact"},{"name":"CDG2C","type":"exact"},{"name":"CDGIIc","type":"exact"},{"name":"LAD-II","type":"exact"},{"name":"LAD2","type":"exact"},{"name":"RHS","type":"exact"},{"name":"Rambam-Hasharon syndrome","type":"exact"},{"name":"SLC35C1-CDG","type":"exact"},{"name":"SLC35C1-CDG (CDG-IIc)","type":"related"},{"name":"congenital disorder of glycosylation type IIC","type":"related"},{"name":"congenital disorder of glycosylation, type IIc","type":"related"},{"name":"lad-II","type":"exact"},{"name":"lad-type II","type":"exact"},{"name":"leukocyte adhesion deficiency type 2","type":"exact"},{"name":"leukocyte adhesion deficiency type II","type":"exact"},{"name":"leukocyte adhesion deficiency, type 2","type":"related"},{"name":"leukocyte adhesion deficiency, type II","type":"exact"},{"name":"sialyl-Lewis X defect","type":"exact"}],"termid":"MONDO:0009953","terms_by_termid":{"MONDO:0009953":null},"xrefs":{"Monarch":{"xref_id":"0009953"}}}


id: MOD:00319
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-aspartic acid residue by a thioether bond to form 2-(S-L-cysteinyl)-L-aspartic acid.","definition_xrefs":["PubMed:11555656","PubMed:11717396","RESID:AA0314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"3-(S-L-cysteinyl)-L-aspartic acid","synonyms":[{"name":"(2R,3S)-2-amino-3-([(2R)-2-amino-2-carboxyethyl]sulfanyl)butanedioic acid","type":"exact"},{"name":"(2R,3S,6R)-2,6-diamino-3-carboxy-4-thiaheptanedioic acid","type":"exact"},{"name":"3-(L-cystein-S-yl)-L-aspartic acid","type":"exact"},{"name":"3-carboxy-L-lanthionine","type":"exact"},{"name":"CROSSLNK 3-cysteinyl-aspartic acid (Cys-Asp)","type":"exact"}],"termid":"MOD:00319"}


id: MONDO:0008422
data:
  {"annotated_genes":["SJAG_01615"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85949],"is_not":false,"summary":null,"term":"MONDO:0008422"}]},"cv_name":"mondo","definition":"Autosomal dominant form of sideroblastic anemia.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01615":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0000426","MONDO:0005570"],"is_obsolete":false,"name":"autosomal dominant sideroblastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567160","DOID:0060335","MEDGEN:902781","OMIM:182170","UMLS:C4225428","GARD:18380"],"synonyms":[{"name":"SIDBA4","type":"related"},{"name":"anemia, sideroblastic, 4","type":"related"},{"name":"anemia, sideroblastic, autosomal dominant","type":"related"},{"name":"sideroblastic anemia, autosomal dominant","type":"exact"}],"termid":"MONDO:0008422","terms_by_termid":{"MONDO:0008422":null},"xrefs":{"Monarch":{"xref_id":"0008422"}}}


id: GO:0046941
data:
  {"annotated_genes":["SJAG_02309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93090],"is_not":false,"summary":null,"term":"GO:0046941"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-azetidine-2-carboxylic acid + acetyl-CoA = CoA-SH + N-acetyl azetidine-2-carboxylic acid.","definition_xrefs":["PMID:12761200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"azetidine-2-carboxylic acid acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046941","terms_by_termid":{"GO:0046941":null}}


id: GO:0014059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of dopamine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"dopamine secretion","termid":"GO:0014046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of dopamine secretion","termid":"GO:0014059"}


id: GO:0030301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cholesterol transport","termid":"GO:0030301"}


id: PATO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits rate variation or change.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"rate","termid":"PATO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of rate","termid":"PATO:0001586"}


id: PBO:0028965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha,alpha-trehalase_activity_during_cellular_response_to_nutrient","termid":"PBO:0028965"}


id: PBO:0027295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_tetranucleate_vegetative_cell","termid":"PBO:0027295"}


id: PBO:0052163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 11","termid":"PBO:0052163"}


id: PBO:0052567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 4","termid":"PBO:0052567"}


id: MOD:01805
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-aspartic acid residue and a glycine residue by an isopeptide bond with formation of N-(L-isoaspartyl)-glycine and the release of water.","definition_xrefs":["RESID:AA0126","ChEBI:21479","PubMed:18671394","PubMed:1826288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N-(L-isoaspartyl)-glycine","termid":"MOD:01928"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-isoaspartyl)-glycine (Asp)","synonyms":[{"name":"(2S)-2-amino-4-(carboxymethyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4-(carboxymethyl)-butanediamic acid","type":"exact"},{"name":"CROSSLNK Isoaspartyl glycine isopeptide (Asp-Gly)","type":"exact"},{"name":"CROSSLNK Isoaspartyl glycine isopeptide (Gly-Asp)","type":"exact"},{"name":"N-(L-isoaspartyl)-glycine","type":"exact"},{"name":"N-beta-aspartylglycine","type":"exact"},{"name":"N4-(carboxymethyl)-asparagine","type":"exact"},{"name":"isoaspartyl glycine","type":"exact"}],"termid":"MOD:01805"}


id: PBO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in meiosis Mei2","termid":"PBO:0002558"}


id: PBO:0113174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; seven closely related but non-identical invertase genes have been described in yeast (SUC1-5, 7, 8) but only SUC2 is in the reference strain (S288C); mapped to 228.0 cM on chrVII","termid":"PBO:0113174"}


id: GO:0047801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + 2-oxoglutarate = mercaptopyruvate + L-glutamate.","definition_xrefs":["RHEA:17441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"L-cysteine transaminase activity","secondary_identifiers":["EC:2.6.1.3","Reactome:R-HSA-9012597","MetaCyc:CYSTEINE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-cysteine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"cysteine aminotransferase activity","type":"broad"},{"name":"cysteine transaminase activity","type":"exact"}],"termid":"GO:0047801"}


id: PBO:0055244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2671","termid":"PBO:0055244"}


id: PBO:0079708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 2","termid":"PBO:0079708"}


id: FYPO:0007965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which heterothallic haploid cells spontaneously form cells with diploid DNA content after failing chromosome segregation and  consequently nuclear division. The nucleus is displaced from the cell center by actin cables, preventing chromosome cut and leading to diploidisation.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased spontaneous diploidization","termid":"FYPO:0000252"},{"relation_name":"output_of","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000337","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased spontaneous diploidization due to abolished sister chromatid separation","secondary_identifiers":["PMID:33506191","PomBase:mlr"],"synonyms":[{"name":"escape from mitotic catastrophe","type":"broad"}],"termid":"FYPO:0007965"}


id: GO:0019233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. A painful stimulus is any physical or chemical event that has the potential to cause tissue damage (actual or perceived) and activates the nociceptive system.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of pain","secondary_identifiers":["Wikipedia:Nociception"],"synonyms":[{"name":"nociception","type":"related"},{"name":"perception of physiological pain","type":"narrow"}],"termid":"GO:0019233"}


id: GO:0022835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when a specific neurotransmitter has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0038023","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"transmitter-gated channel activity","synonyms":[{"name":"extracellular substance gated channel activity","type":"exact"},{"name":"neurotransmitter-gated channel activity","type":"exact"}],"termid":"GO:0022835"}


id: PBO:0005629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein (predicted)","termid":"PBO:0005629"}


id: PBO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B8 pseudogene 3","termid":"PBO:0060777"}


id: PBO:0030096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_methionine_nitrogen_source","termid":"PBO:0030096"}


id: GO:0102277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucosaminyl-(1->4)-N-acetyl-D-glucosamine + H2O = D-glucosamine + N-acetyl-D-glucosamine.","definition_xrefs":["RHEA:62164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-acetamido-4-O-(2-amino-2-deoxy-beta-D-glucopyranosyl)-2-deoxy-D-glucose exo-beta-D-glucosaminidase activity","secondary_identifiers":["MetaCyc:RXN-12544"],"termid":"GO:0102277"}


id: MONDO:0020074
data:
  {"annotated_genes":["SJAG_04513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013526"}]},"cv_name":"mondo","definition":"A rare group of disorders characterized by the development of myoclonic and tonic-clonic epileptic seizures associated with progressive degeneration of the nervous system.","definition_xrefs":["NCIT:C7636"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"excluded_subClassOf","term_name":"adolescent-onset epilepsy syndrome","termid":"MONDO:0020073"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"myoclonic epilepsy","termid":"MONDO:0100577"},{"relation_name":"is_a","term_name":"variable-age epilepsy syndrome with developmental and/or epileptic encephalopathy or progressive neurological deterioration","termid":"MONDO:0800495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"progressive myoclonus epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0751778","icd11.foundation:173613583","NANDO:1200953","Orphanet:98261","MEDGEN:199732","NANDO:2100237","OMIMPS:254800","MESH:D020191","DOID:891","SCTID:267581004","GARD:7140","NORD:1617"],"synonyms":[{"name":"PME","type":"exact"},{"name":"epilepsy, progressive myoclonic","type":"exact"},{"name":"familial progressive myoclonic epilepsy","type":"related"},{"name":"progressive myoclonic epilepsy","type":"exact"},{"name":"progressive myoclonic epilepsy (disorder) [ambiguous]","type":"exact"},{"name":"progressive myoclonus epilepsy","type":"exact"}],"termid":"MONDO:0020074","terms_by_termid":{"MONDO:0013526":null},"xrefs":{"Monarch":{"xref_id":"0020074"}}}


id: GO:0052451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the inflammatory response of a symbiont organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont inflammatory response (obsolete GO:0052451)","synonyms":[{"name":"modulation by organism of symbiont inflammatory response","type":"exact"}],"termid":"GO:0052451"}


id: FYPO:0008370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is increased during a cellular response to salt stress.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to cell surface","termid":"FYPO:0005173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to cell surface during cellular response to salt stress","termid":"FYPO:0008370"}


id: PBO:0038361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-parasitoid_of","termid":"PBO:0038361"}


id: MOD:00443
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein L-arginine residue to protonated omega-N,omega-N-dimethlyated L-arginine with secondary neutral loss of an N,N-dimethylamine molecular fragment.","definition_xrefs":["PubMed:15835918","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated omega-N,omega-N-dimethlyated L-arginine with secondary neutral loss of N,N-dimethylamine","synonyms":[{"name":"dDMA-NoMe2+Arg","type":"exact"}],"termid":"MOD:00443"}


id: PBO:0078234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 16","termid":"PBO:0078234"}


id: GO:0050566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + aspartyl-tRNA(Asn) + ATP = L-glutamate + asparaginyl-tRNA(Asn) + phosphate + ADP.","definition_xrefs":["MetaCyc:6.3.5.6-RXN","EC:6.3.5.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016874","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["RHEA:14513","Wikipedia:Asparaginyl-tRNA_synthase_(glutamine-hydrolysing)"],"synonyms":[{"name":"Asp-AdT activity","type":"related"},{"name":"Asp-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"asparaginyl-tRNA synthase (glutamine-hydrolysing)","type":"related"},{"name":"aspartyl-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"}],"termid":"GO:0050566"}


id: PBO:0042172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCN2 antisense RNA 1","termid":"PBO:0042172"}


id: GO:1905394
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a retromer complex.","definition_xrefs":["GOC:bc","GOC:TermGenie","GOC:PARL","PMID:27385586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"retromer complex binding","termid":"GO:1905394"}


id: PR:O43026
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpd3 gene.","definition_xrefs":["UniProtKB:O43026","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.12","synonyms":[{"name":"GAPDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpd3","type":"exact"}],"termid":"PR:O43026"}


id: PBO:0040563
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 3","termid":"PBO:0040563"}


id: PBO:0078501
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 3-1","termid":"PBO:0078501"}


id: PBO:0078982
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon TGA) 2-1","termid":"PBO:0078982"}


id: PBO:0117035
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MALRD1 antisense RNA 1","termid":"PBO:0117035"}


id: PBO:0058033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4254","termid":"PBO:0058033"}


id: GO:0106348
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a adenosine in U2 snRNA + S-adenosyl-L-methionine = an N6-methyl-adenosine in U2 snRNA + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:32637152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methyltransferase activity","termid":"GO:0106346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"U2 snRNA adenosine m6 methyltransferase activity","termid":"GO:0106348"}


id: PBO:0068633
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 13, pseudogene","termid":"PBO:0068633"}


id: GO:1905174
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular smooth muscle cell dedifferentiation.","definition_xrefs":["GO_REF:0000058","GOC:BHF_miRNA","PMID:19088079","GOC:rph","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell dedifferentiation","termid":"GO:1990936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell dedifferentiation","synonyms":[{"name":"regulation of vascular smooth muscle cell dedifferentiation","type":"exact"}],"termid":"GO:1905174"}


id: PBO:0017620
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Progressive Myoclonus Epilepsy","termid":"PBO:0017620"}


id: GO:1901274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-dehydro-3-deoxy-D-gluconic acid.","definition_xrefs":["UniPathway:UPA00856","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"2-dehydro-3-deoxy-D-gluconic acid metabolic process","termid":"GO:1901272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconic acid biosynthetic process","synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconic acid anabolism","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid biosynthesis","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid formation","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid synthesis","type":"exact"}],"termid":"GO:1901274"}


id: PBO:0038285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecular_weight","termid":"PBO:0038285"}


id: PBO:0117381
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSH2D and RAB8A antisense RNA 1","termid":"PBO:0117381"}


id: MONDO:0001804
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior scleritis","secondary_identifiers":["UMLS:C0155353","DOID:13794","SCTID:63454000","MEDGEN:509928","ICD9:379.03","icd11.foundation:728494077"],"termid":"MONDO:0001804","xrefs":{"Monarch":{"xref_id":"0001804"}}}


id: internal:related
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related","termid":"internal:related"}


id: GO:0061982
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id: PR:O94405
data:
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id: GO:0030489
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id: PBO:0070649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 20","termid":"PBO:0070649"}


id: PBO:0000383
data:
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id: PBO:0003485
data:
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id: PBO:0082854
data:
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id: MONDO:0018214
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014517"}]},"cv_name":"mondo","definition":"A familial epilepsy syndrome in which family members display a seizure disorder from the generalized epilepsy with febrile seizures plus spectrum which ranges from simple febrile seizures (FS) to the more severe phenotype of myoclonic-astatic epilepsy (MAE) or Dravet syndrome (DS).","definition_xrefs":["Orphanet:36387"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"hereditary generalized epilepsy","termid":"MONDO:0100576"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:699688008","MEDGEN:503203","OMIMPS:604233","UMLS:C3502809","NCIT:C122811","DOID:0060170","MESH:C565808","GARD:18641"],"synonyms":[{"name":"GEFS+","type":"exact"},{"name":"epilepsy, generalized, with febrile seizures plus","type":"exact"},{"name":"generalised epilepsy with febrile seizures-plus","type":"exact"},{"name":"generalized epilepsy with febrile seizures plus","type":"exact"},{"name":"genetic epilepsy with febrile seizures plus","type":"exact"},{"name":"genetic epilepsy with febrile seizures-plus","type":"exact"}],"termid":"MONDO:0018214","terms_by_termid":{"MONDO:0014517":null},"xrefs":{"Monarch":{"xref_id":"0018214"}}}


id: GO:0004462
data:
  {"annotated_genes":["SJAG_04726"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68546],"is_not":false,"summary":null,"term":"GO:0004462"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal.","definition_xrefs":["EC:4.4.1.5","RHEA:19069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"lactoylglutathione lyase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R02530","MetaCyc:GLYOXI-RXN","Reactome:R-HSA-5694071"],"synonyms":[{"name":"(R)-S-lactoylglutathione methylglyoxal-lyase (isomerizing) activity","type":"related"},{"name":"(R)-S-lactoylglutathione methylglyoxal-lyase (isomerizing; glutathione-forming)","type":"related"},{"name":"aldoketomutase activity","type":"related"},{"name":"glyoxalase I activity","type":"related"},{"name":"glyoxylase I","type":"related"},{"name":"ketone-aldehyde mutase activity","type":"related"},{"name":"methylglyoxalase activity","type":"related"}],"termid":"GO:0004462","terms_by_termid":{"GO:0004462":null}}


id: GO:0042000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptides or proteins produced by an organism to a location inside its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:15953025","PMID:18406478","GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation of molecules into host","termid":"GO:0044417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"translocation of peptides or proteins into host","secondary_identifiers":["GO:0051808"],"synonyms":[{"name":"translocation of peptides or proteins into other organism during symbiotic interaction","type":"broad"},{"name":"translocation of peptides or proteins into other organism involved in symbiotic interaction","type":"broad"},{"name":"transport of peptides or proteins into host","type":"exact"},{"name":"transport of peptides or proteins into other organism during symbiotic interaction","type":"broad"}],"termid":"GO:0042000"}


id: PBO:0063566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PENK antisense RNA 1","termid":"PBO:0063566"}


id: GO:1900865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any RNA modification that takes place in chloroplast.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast RNA modification","synonyms":[{"name":"RNA editing in chloroplast","type":"narrow"}],"termid":"GO:1900865"}


id: PBO:0069906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1197, pseudogene","termid":"PBO:0069906"}


id: MONDO:1010735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleroderma that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"scleroderma, non-human animal","termid":"MONDO:1010119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scleroderma, chicken","secondary_identifiers":["OMIA:001202-9031"],"termid":"MONDO:1010735","xrefs":{"Monarch":{"xref_id":"1010735"}}}


id: MONDO:0032659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucocutaneous ulceration, chronic","secondary_identifiers":["OMIM:618287","MEDGEN:1648375","UMLS:C4748997"],"synonyms":[{"name":"CMCU","type":"related"},{"name":"MUCOCUTANEOUS ULCERATION, CHRONIC","type":"related"}],"termid":"MONDO:0032659","xrefs":{"Monarch":{"xref_id":"0032659"}}}


id: MONDO:0957531
data:
  {"annotated_genes":["SJAG_03267"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86680],"is_not":false,"summary":null,"term":"MONDO:0957531"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03267":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly and movement abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1841260","OMIM:620445","UMLS:C5830624"],"termid":"MONDO:0957531","terms_by_termid":{"MONDO:0957531":null},"xrefs":{"Monarch":{"xref_id":"0957531"}}}


id: GO:0106237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,12R,14Z)-12-hydroperoxyicosa-5,8,10,14-tetraenoate.","definition_xrefs":["GOC:gap","PMID:10100631","RHEA:41336","PMID:11256953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"arachidonate 12(R)-lipoxygenase activity","termid":"GO:0106237"}


id: PBO:0083658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease required for telomere elongation; required for telomeric 5' C-rich strand resection; involved in ds-break repair and processing hairpin DNA structures with the MRX complex; function requires sumoylation and phosphorylation; exists as inactive oligomers that are transiently released into smaller active units by phosphorylation; DNA damage triggers Sae2p removal, so active Sae2p is present only transiently; sequence and functional similarity with human CtIP/RBBP8","termid":"PBO:0083658"}


id: MOD:00403
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to homoserine.","definition_xrefs":["DeltaMass:113","OMSSA:56","Unimod:10#M"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine","synonyms":[{"name":"Homoserine","type":"related"},{"name":"Homoserine formed from Met by CNBr treatment","type":"exact"},{"name":"Met->Hse","type":"related"},{"name":"ctermpephsem","type":"exact"}],"termid":"MOD:00403"}


id: PBO:0076203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 13","termid":"PBO:0076203"}


id: MONDO:0002076
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008259"}]},"cv_name":"mondo","definition":"Abnormal presence of air in the pleural cavity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleural disorder","termid":"MONDO:0002037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"pneumothorax","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0002107","ICD9:512.8","icd11.foundation:1946559257","MESH:D011030","DOID:1673","MEDGEN:19365","UMLS:C0032326","SCTID:36118008","NCIT:C38006"],"synonyms":[{"name":"pneumothorax","type":"exact"},{"name":"pneumothorax (disease)","type":"exact"}],"termid":"MONDO:0002076","terms_by_termid":{"MONDO:0008259":null},"xrefs":{"Monarch":{"xref_id":"0002076"}}}


id: PBO:0072932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 12","termid":"PBO:0072932"}


id: PBO:0083284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified gene MAE1","termid":"PBO:0083284"}


id: MONDO:1011712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alloxan-diabetes, non-human animal","secondary_identifiers":["OMIA:000029"],"termid":"MONDO:1011712","xrefs":{"Monarch":{"xref_id":"1011712"}}}


id: PBO:0016878
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific","termid":"PBO:0016878"}


id: PBO:0003974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp7 (predicted)","termid":"PBO:0003974"}


id: PBO:0029843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_acetylation","termid":"PBO:0029843"}


id: PBO:0042990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 3","termid":"PBO:0042990"}


id: MONDO:0041261
data:
  {"annotated_genes":["SJAG_01183","SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[86463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of acid-base balance","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0268029","MEDGEN:541141","SCTID:26436007"],"synonyms":[{"name":"disorder of acid-base balance","type":"exact"},{"name":"disturbance of acid-base balance","type":"related"}],"termid":"MONDO:0041261","terms_by_termid":{"MONDO:0011268":null,"MONDO:0011422":null},"xrefs":{"Monarch":{"xref_id":"0041261"}}}


id: PBO:0044742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 20","termid":"PBO:0044742"}


id: GO:2000115
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of bipolar cell polarity regulating in cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"regulates","term_name":"maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061305"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000115","terms_by_termid":{"GO:0061361":null}}


id: FYPO:0007941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is normal (i.e. indistinguishable from wild type) during  the meiotic cell cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"},{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin organization during meiotic cell cycle","synonyms":[{"name":"normal chromatin organisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007941"}


id: GO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desmosome organization","termid":"GO:0002934"},{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"desmosome assembly","termid":"GO:0002159"}


id: GO:1900887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pentadecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentadecane metabolic process","termid":"GO:1900890"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"pentadecane biosynthetic process","termid":"GO:1900634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pentadecane biosynthetic process","synonyms":[{"name":"regulation of pentadecane anabolism","type":"exact"},{"name":"regulation of pentadecane biosynthesis","type":"exact"},{"name":"regulation of pentadecane formation","type":"exact"},{"name":"regulation of pentadecane synthesis","type":"exact"}],"termid":"GO:1900887"}


id: PBO:0084835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein that may have a role in phospholipid metabolism; inner membrane protein with similarity to Mdm32p; required for normal mitochondrial morphology and inheritance; interacts genetically with MMM1, MMM2, MDM10, MDM12, and MDM34","termid":"PBO:0084835"}


id: PBO:0040981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 like 1","termid":"PBO:0040981"}


id: PBO:0081684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 606","termid":"PBO:0081684"}


id: MONDO:0041259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An myocarditis caused by infection with Corynebacterium diphtheriae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial myocarditis","termid":"MONDO:0001114"},{"relation_name":"is_a","term_name":"diphtheria","termid":"MONDO:0005504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"diphtheritic myocarditis","secondary_identifiers":["icd11.foundation:1165221541","MEDGEN:509091","SCTID:26117009","UMLS:C0152952"],"synonyms":[{"name":"Corynebacterium diphtheriae caused myocarditis","type":"exact"},{"name":"Corynebacterium diphtheriae myocarditis","type":"exact"},{"name":"diphtheritic myocarditis","type":"exact"}],"termid":"MONDO:0041259","xrefs":{"Monarch":{"xref_id":"0041259"}}}


id: PBO:0046566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 8, envelope","termid":"PBO:0046566"}


id: FYPO:0001250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin is lower than in wild type. In cells with decreased origin firing efficiency, genomic DNA replication initiates from fewer origins than wild type, and is completed in fewer, larger segments, than wild type.","definition_xrefs":["PomBase:mah","PMID:18799612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased origin firing efficiency","synonyms":[{"name":"decreased origin firing efficiency during mitotic cell cycle","type":"related"},{"name":"decreased origin firing efficiency during vegetative growth","type":"exact"},{"name":"reduced origin firing efficiency","type":"exact"}],"termid":"FYPO:0001250"}


id: _global:assayed_transcript
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and a transcript, such as a gene product or transcript type in SO, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_transcript","termid":"_global:assayed_transcript"}


id: SO:0002144
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2AZ modification where the modification is the acetylation of the residue.","definition_xrefs":["PMID:19385636","PMID:27087541","PMID:24316985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2A_acetylation_site","termid":"SO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2AZ_acetylation_site","synonyms":[{"name":"H2A.Zac","type":"exact"},{"name":"H2AZac","type":"exact"},{"name":"histone 2AZ acetylation site","type":"exact"}],"termid":"SO:0002144"}


id: GO:0035357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a ligand binding to an intracellular peroxisome proliferator activated receptor (alpha, beta or gamma) of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:18221086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"peroxisome proliferator activated receptor signaling pathway","synonyms":[{"name":"PPAR signaling pathway","type":"exact"},{"name":"peroxisome proliferator activated receptor signalling pathway","type":"exact"},{"name":"peroxisome proliferator-activated receptor signaling pathway","type":"exact"}],"termid":"GO:0035357"}


id: PBO:0053642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 690","termid":"PBO:0053642"}


id: GO:1903272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytoplasmic translational elongation through polyproline stretches.","definition_xrefs":["PMID:24923804","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytoplasmic translational elongation","termid":"GO:1900249"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation through polyproline stretches","termid":"GO:1903270"},{"relation_name":"positively_regulates","term_name":"cytoplasmic translational elongation through polyproline stretches","termid":"GO:0097622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytoplasmic translational elongation through polyproline stretches","synonyms":[{"name":"activation of cytoplasmic translational elongation through polyproline stretches","type":"narrow"},{"name":"up regulation of cytoplasmic translational elongation through polyproline stretches","type":"exact"},{"name":"up-regulation of cytoplasmic translational elongation through polyproline stretches","type":"exact"},{"name":"upregulation of cytoplasmic translational elongation through polyproline stretches","type":"exact"}],"termid":"GO:1903272"}


id: PBO:0047724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 intronic transcript 1","termid":"PBO:0047724"}


id: GO:0032997
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a subunit or subunits capable of binding the Fc portion of an immunoglobulin with additional signaling components. The complex functions as a receptor for immunoglobulin.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Fc receptor complex","synonyms":[{"name":"Fc-receptor complex","type":"exact"},{"name":"FcR complex","type":"exact"},{"name":"immunoglobulin receptor complex","type":"broad"}],"termid":"GO:0032997"}


id: PBO:0043451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 12","termid":"PBO:0043451"}


id: PBO:0039396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 1","termid":"PBO:0039396"}


id: PBO:0075644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty RTK signaling antagonist 3","termid":"PBO:0075644"}


id: PBO:0041026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'), 5'-bisphosphate nucleotidase 1","termid":"PBO:0041026"}


id: PBO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoadipate and 2-oxoglutarate transporter (predicted)","termid":"PBO:0002078"}


id: PBO:0075125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaphilin","termid":"PBO:0075125"}


id: PATO:0001878
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's consisting of two curves, in opposite directions. S-shaped.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sigmoid","synonyms":[{"name":"S-shaped","type":"exact"},{"name":"sigmoidal","type":"exact"}],"termid":"PATO:0001878"}


id: GO:0099083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Modulation of synaptic transmission by cell-cell signaling across the synaptic cleft from postsynapse to presynapse, mediated by a neuropeptide.","definition_xrefs":["PMID:19448629","GOC:bf","GOC:dos","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099083"}


id: PBO:0030736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G2_phase_during_nitrogen_starvation","termid":"PBO:0030736"}


id: PBO:0067748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 47","termid":"PBO:0067748"}


id: FYPO:0005811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the biogenesis of nuclear membrane that normally forms part of mitosis is abnormal.","definition_xrefs":["PomBase:mah","PMID:26869222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000337","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nuclear membrane biogenesis involved in mitosis","synonyms":[{"name":"abnormal membrane addition to the nuclear membrane during division","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved in mitosis during vegetative growth","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved in mitotic nuclear division","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved nuclear division during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005811"}


id: FYPO:0006463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA cleavage and polyadenylation specificity factor complex assembly is abnormal.","definition_xrefs":["PMID:27401558","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"abnormal mRNA cleavage and polyadenylation specificity factor complex assembly","synonyms":[{"name":"abnormal mRNA cleavage and polyadenylation specificity factor complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal mRNA cleavage and polyadenylation specificity factor complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006463"}


id: PBO:0027122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_zygotic_meiosis","termid":"PBO:0027122"}


id: GO:0044093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.","definition_xrefs":["GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of molecular function","termid":"GO:0044093"}


id: PBO:0044024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 alpha 3","termid":"PBO:0044024"}


id: GO:0019324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-lyxose, the L-enantiomer of aldopentose lyxo-pentose, the C-2 epimer of xylose.","definition_xrefs":["GOC:jsg","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"L-lyxose metabolic process","secondary_identifiers":["MetaCyc:LYXMET-PWY"],"synonyms":[{"name":"L-lyxose metabolism","type":"exact"}],"termid":"GO:0019324"}


id: GO:1990869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.","definition_xrefs":["PMID:11113082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to chemokine","termid":"GO:1990868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chemokine","termid":"GO:1990869"}


id: GO:0060446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of branches in the open tracheal system are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in open tracheal system development","termid":"GO:0060446"}


id: PBO:0066725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 22","termid":"PBO:0066725"}


id: FYPO:0003651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to nitrosative stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level during cellular response to nitrosative stress","synonyms":[{"name":"decreased protein accumulation during cellular response to nitrosative stress","type":"related"},{"name":"decreased protein level during cellular response to nitrosative stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to nitrosative stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0003651"}


id: GO:0046845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of a set number of cells to each primary branch in an open tracheal system, prior to the onset of cell migration. This establishes different domains of cells within the tracheal placode.","definition_xrefs":["PMID:10684581","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branched duct epithelial cell fate determination, open tracheal system","synonyms":[{"name":"branch cell fate determination","type":"broad"}],"termid":"GO:0046845"}


id: PBO:0072366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 52","termid":"PBO:0072366"}


id: MONDO:0020763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Menke-Hennekam syndrome","termid":"MONDO:0020774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menke-Hennekam syndrome 1","secondary_identifiers":["MEDGEN:1675629","OMIM:618332","UMLS:C5193034"],"synonyms":[{"name":"MKHK1","type":"related"},{"name":"Menke-Hennekam syndrome 1","type":"exact"}],"termid":"MONDO:0020763","xrefs":{"Monarch":{"xref_id":"0020763"}}}


id: MONDO:0030914
data:
  {"annotated_genes":["SJAG_01900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85563],"is_not":false,"summary":null,"term":"MONDO:0030914"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Clark-Baraitser syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:443983","DOID:0080234","OMIM:617752","MESH:C536208","OMIM:300602","UMLS:C2931130","GARD:9994","Orphanet:600731"],"synonyms":[{"name":"Baraitser syndrome","type":"related"},{"name":"Clark-Baraitser syndrome","type":"exact"},{"name":"MRD49","type":"exact"},{"name":"autosomal dominant intellectual disability 49","type":"related"},{"name":"autosomal dominant mental retardation 49","type":"related"},{"name":"intellectual disability, autosomal dominant 49","type":"exact"},{"name":"intellectual disability, tall stature, obesity, macrocephaly and typical facial features","type":"related"},{"name":"mental retardation, autosomal dominant 49","type":"related"},{"name":"mental retardation, tall stature, obesity, macrocephaly and typical facial features","type":"related"}],"termid":"MONDO:0030914","terms_by_termid":{"MONDO:0030914":null},"xrefs":{"Monarch":{"xref_id":"0030914"}}}


id: MONDO:0011911
data:
  {"annotated_genes":["SJAG_02539","SJAG_03153"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87292,87293],"is_not":false,"summary":null,"term":"MONDO:0011911"}]},"cv_name":"mondo","definition":"Craniolenticulosutural dysplasia (CLSD), also known as Boyadjiev-Jabs syndrome, is characterized by the specific association of large and late-closing fontanels, hypertelorism, early-onset cataract and mild generalized skeletal dysplasia.","definition_xrefs":["Orphanet:50814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02539":null,"SJAG_03153":null},"genotype_count":0,"is_obsolete":false,"name":"craniolenticulosutural dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:970423180","MESH:C564332","MEDGEN:334671","DOID:0070307","OMIM:607812","UMLS:C1843042","SCTID:725100001","GARD:16647"],"synonyms":[{"name":"Boyadjiev-Jabs syndrome","type":"exact"},{"name":"CLSD","type":"related"},{"name":"cranio-lenticulo-sutural dysplasia, CLSD","type":"exact"},{"name":"craniolenticulosutural dysplasia","type":"exact"}],"termid":"MONDO:0011911","terms_by_termid":{"MONDO:0011911":null},"xrefs":{"Monarch":{"xref_id":"0011911"}}}


id: PBO:0078587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60","termid":"PBO:0078587"}


id: MONDO:0017113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated bilateral hemispheric cerebellar hypoplasia is a rare cerebellar malformation characterized by hypoplasia of both cerebellar hemispheres with no other cerebellar/cerebral anomaly or other associated clinical feature. Affected patients present with mild hypotonia with motor delay, mild cognitive impairment, language delay, visuospatial and verbal memory deficits, dysdiadochokinesis, intentional tremor, and possible presence of emotional fragility and mild depression.","definition_xrefs":["Orphanet:269221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated bilateral hemispheric cerebellar hypoplasia","secondary_identifiers":["GARD:20996","MEDGEN:1657026","icd11.foundation:1366151963","UMLS:C4749791"],"termid":"MONDO:0017113","xrefs":{"Monarch":{"xref_id":"0017113"}}}


id: MONDO:0003486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma characterized by the presence of cells with hyperchromatic nuclei, scant amount of cytoplasm, and peripheral nuclear palisading.","definition_xrefs":["NCIT:C54244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"basaloid carcinoma","termid":"MONDO:0006102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"basaloid squamous cell carcinoma","secondary_identifiers":["EFO:1001940","ICDO:8083/3","MEDGEN:266085","DOID:5522","UMLS:C1266005","icd11.foundation:1738201981"],"synonyms":[{"name":"basaloid carcinoma","type":"broad"},{"name":"basaloid carcinoma (morphologic abnormality)","type":"broad"},{"name":"basaloid squamous cell carcinoma","type":"exact"},{"name":"basaloid squamous cell carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003486","xrefs":{"Monarch":{"xref_id":"0003486"}}}


id: PBO:0090884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex tRNA uridine(34) acetyltransferase subunit Elp3","termid":"PBO:0090884"}


id: PBO:0078739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRMT1 pseudogene 1","termid":"PBO:0078739"}


id: GO:0070866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex in the presence of sterols.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sterol-dependent protein binding","termid":"GO:0070866"}


id: PBO:0031171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_following_normal_mitotic_entry","termid":"PBO:0031171"}


id: MONDO:0017823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mixed functioning pituitary adenoma","termid":"MONDO:0017822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatomammotropinoma","secondary_identifiers":["NCIT:C45928","Orphanet:314769","MEDGEN:1649254","GARD:21391","UMLS:C4755297","ICD10CM:D35.2"],"synonyms":[{"name":"GH and PRL cosecreting pituitary adenoma","type":"exact"},{"name":"Growth hormone and prolactin cosecreting pituitary adenoma","type":"exact"},{"name":"Somatolactotropinoma","type":"exact"},{"name":"Somatoprolactinoma","type":"exact"}],"termid":"MONDO:0017823","xrefs":{"Monarch":{"xref_id":"0017823"}}}


id: PBO:0060823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 1","termid":"PBO:0060823"}


id: GO:0052436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the symbiont calcium-dependent protein kinase signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont calcium-dependent protein kinase pathway (obsolete GO:0052436)","synonyms":[{"name":"modulation by organism of defense-related symbiont CDPK pathway","type":"exact"},{"name":"modulation by organism of defense-related symbiont calcium-dependent protein kinase pathway","type":"exact"}],"termid":"GO:0052436"}


id: MONDO:0007317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chlorpropamide-alcohol flushing (obsolete MONDO:0007317)","secondary_identifiers":["OMIM:118430"],"synonyms":[{"name":"CHLORPROPAMIDE-alcohol flushing","type":"related"},{"name":"CPAF","type":"related"},{"name":"chlorpropamide-alcohol flushing","type":"exact"}],"termid":"MONDO:0007317","xrefs":{"Monarch":{"xref_id":"0007317"}}}


id: GO:0045821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycolytic process","termid":"GO:0006110"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide catabolic process","termid":"GO:0033123"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of ATP metabolic process","termid":"GO:1903580"},{"relation_name":"positively_regulates","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0005975","GO:0055086","GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"positive regulation of glycolytic process","synonyms":[{"name":"activation of glycolysis","type":"narrow"},{"name":"stimulation of glycolysis","type":"narrow"},{"name":"up regulation of glycolysis","type":"exact"},{"name":"up-regulation of glycolysis","type":"exact"},{"name":"upregulation of glycolysis","type":"exact"}],"termid":"GO:0045821"}


id: GO:0040012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of locomotion of a cell or organism.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of locomotion","termid":"GO:0040012"}


id: GO:0071228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor cell","termid":"GO:0071228"}


id: PR:Q10080
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.01c gene.","definition_xrefs":["UniProtKB:Q10080","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0654 protein C11D3.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.01c","synonyms":[{"name":"Spom972h-SPAC11D3.01c","type":"exact"}],"termid":"PR:Q10080"}


id: GO:1903100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate.","definition_xrefs":["GO_REF:0000068","PMID:19037259","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:1903100"}


id: FYPO:0002291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0002291)","synonyms":[{"name":"normal protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0002291"}


id: PR:O94491
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dal51 gene.","definition_xrefs":["UniProtKB:O94491","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C417.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.10","synonyms":[{"name":"Spom972h-dal51","type":"exact"}],"termid":"PR:O94491"}


id: FYPO:0007754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which phase II of mitotic spindle assembly does not occur. During phase II, the spindle is normally maintained at a constant length during mitotic metaphase.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic spindle assembly","termid":"FYPO:0001683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000054","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000337"],"is_obsolete":false,"name":"abolished mitotic spindle formation phase II","synonyms":[{"name":"abnormal mitotic spindle formation, without spindle phase II","type":"exact"},{"name":"abolished mitotic spindle assembly phase II","type":"exact"},{"name":"abolished mitotic spindle formation (spindle phase two)","type":"exact"}],"termid":"FYPO:0007754"}


id: PBO:0004399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27/L28","termid":"PBO:0004399"}


id: GO:1900478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sulfate assimilation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:7601277","PMID:7891681","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900478)","synonyms":[{"name":"activation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:1900478"}


id: PBO:0013782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase mvd1 (predicted)","termid":"PBO:0013782"}


id: MONDO:0017569
data:
  {"annotated_genes":["SJAG_00660","SJAG_00120","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87556,87555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[86951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"}]},"cv_name":"mondo","definition":"A rare autosomal recessive genetic disorder characterized by facial dysmorphism (down-slanting palpebral fissures, a broad flat nasal bridge and a small mouth) with a progeroid appearance, large and late-closing fontanel, cutis laxa (CL), joint hyperlaxity, athetoid movements and hyperreflexia, pre- and postnatal growth retardation, intellectual deficit and developmental delay, and corneal clouding and cataract.","definition_xrefs":["Orphanet:2962"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare hereditary metabolic disease with peripheral neuropathy (obsolete MONDO:0016133)","termid":"MONDO:0016133"},{"relation_name":"excluded_subClassOf","term_name":"cutis laxa","termid":"MONDO:0016175"},{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of proline metabolism","termid":"MONDO:0017355"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neurometabolic disease (obsolete MONDO:0019058)","termid":"MONDO:0019058"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic corneal dystrophy (obsolete MONDO:0020215)","termid":"MONDO:0020215"},{"relation_name":"excluded_subClassOf","term_name":"obsolete cataract associated with a metabolic disease (obsolete MONDO:0020228)","termid":"MONDO:0020228"},{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disease with cataract (obsolete MONDO:0020280)","termid":"MONDO:0020280"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"premature aging syndrome","termid":"MONDO:0019303"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025"],"is_obsolete":false,"name":"de Barsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535990","NORD:1034","UMLS:C0268354","DOID:0070143","GARD:49","PMID:18388779","SCTID:238826008","MEDGEN:82794"],"synonyms":[{"name":"De Barsy syndrome","type":"exact"},{"name":"autosomal recessive cutis laxa type III","type":"related"},{"name":"corneal clouding, cutis laxa and intellectual disability","type":"related"},{"name":"corneal clouding, cutis laxa and mental retardation","type":"related"},{"name":"cutis laxa growth deficiency syndrome","type":"related"},{"name":"cutis laxa-corneal clouding-intellectual disability syndrome","type":"exact"},{"name":"progeroid syndrome of de Barsy","type":"related"},{"name":"progeroid syndrome, De Barsy type","type":"exact"},{"name":"progeroid syndrome, de Barsy type","type":"related"}],"termid":"MONDO:0017569","terms_by_termid":{"MONDO:0009053":null,"MONDO:0013755":null},"xrefs":{"Monarch":{"xref_id":"0017569"}}}


id: GO:0044846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism reduces the indole acetic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ml","PMID:18056646"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of indole acetic acid levels in host (obsolete GO:0044846)","synonyms":[{"name":"negative regulation by symbiont of IAA levels in host","type":"exact"},{"name":"negative regulation by symbiont of auxin levels in host","type":"exact"}],"termid":"GO:0044846"}


id: GO:0070706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by removal of a single nucleotide.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA nucleotide deletion","synonyms":[{"name":"RNA nucleotide excision","type":"exact"}],"termid":"GO:0070706"}


id: PBO:0057703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1290","termid":"PBO:0057703"}


id: PBO:0087277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain protein implicated in regulating actin polymerization; able to recruit actin polymerization machinery through its SH3 domains; colocalizes with cortical actin patches and Las17p; interacts with type I myosins","termid":"PBO:0087277"}


id: FYPO:0003432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to histone H3 methylated on the lysine at position 9 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal histone H3K9me binding","synonyms":[{"name":"normal K9-methylated histone H3 binding","type":"exact"},{"name":"normal methylated histone H3K9me binding","type":"exact"}],"termid":"FYPO:0003432"}


id: SO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The minimal portion of the promoter required to properly initiate transcription in RNA polymerase II transcribed genes.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_II_core_promoter","synonyms":[{"name":"RNApol II core promoter","type":"exact"}],"termid":"SO:0001669"}


id: FYPO:0004167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing glycerol as the carbon source.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population growth on glycerol carbon source","synonyms":[{"name":"increased growth on glycerol carbon source","type":"broad"},{"name":"increased vegetative cell growth on glycerol carbon source","type":"exact"}],"termid":"FYPO:0004167"}


id: MONDO:0700206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parvoviridae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parvoviridae infectious disease, non-human animal","termid":"MONDO:0700206","xrefs":{"Monarch":{"xref_id":"0700206"}}}


id: MONDO:0018250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"diffuse palmoplantar keratoderma with painful fissures","secondary_identifiers":["MEDGEN:1660049","Orphanet:369999","GARD:17595","UMLS:C4755309"],"termid":"MONDO:0018250","xrefs":{"Monarch":{"xref_id":"0018250"}}}


id: PR:000050523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the dam1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dam1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC589.08c","termid":"PR:000050523"}


id: GO:0002421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"B cell antigen processing and presentation which is initiated by uptake of antigen via pinocytosis.","definition_xrefs":["GOC:add","PMID:7543530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"},{"relation_name":"is_a","term_name":"antigen processing and presentation following pinocytosis","termid":"GO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell antigen processing and presentation following pinocytosis","synonyms":[{"name":"B lymphocyte antigen processing and presentation following pinocytosis","type":"exact"},{"name":"B-cell antigen processing and presentation following pinocytosis","type":"exact"},{"name":"B-lymphocyte antigen processing and presentation following pinocytosis","type":"exact"}],"termid":"GO:0002421"}


id: PBO:0082496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of ADA and SAGA histone acetyltransferase complexes; modifies N-terminal lysines on histones H2B and H3; acetylates Rsc4p, a subunit of the RSC chromatin-remodeling complex, altering replication stress tolerance; relocalizes to the cytosol in response to hypoxia; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; greater involvement in repression of RNAPII-dependent transcription than in activation","termid":"PBO:0082496"}


id: GO:0071116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta1 integrin complex bound to CYR61, a cysteine-rich protein involved in angiogenesis.","definition_xrefs":["PMID:12826661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha6-beta1 integrin-CYR61 complex","synonyms":[{"name":"ITGA6-ITGB1-CYR61 complex","type":"narrow"}],"termid":"GO:0071116"}


id: PBO:0077234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMCC1 divergent transcript","termid":"PBO:0077234"}


id: PBO:0061998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 1 pseudogene","termid":"PBO:0061998"}


id: GO:0070987
data:
  {"annotated_genes":["SJAG_04791","SJAG_03906","SJAG_04190","SJAG_04089","SJAG_00611","SJAG_00153"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61114,67050,70776,99627,103197,104539],"is_not":false,"summary":null,"term":"GO:0070987"}]},"cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions but does not causes an increase in the endogenous mutation level. For S. cerevisiae, RAD30 encodes DNA polymerase eta, which incorporates two adenines. When incorporated across a thymine-thymine dimer, it does not increase the endogenous mutation level.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translesion synthesis","termid":"GO:0019985"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"error-free translesion synthesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-110320"],"termid":"GO:0070987","terms_by_termid":{"GO:0070987":null}}


id: PBO:0089455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex small subunit Toa2","termid":"PBO:0089455"}


id: PBO:0084822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein, putative acetyltransferase; similar to bacterial galactoside O-acetyltransferases; induced by oleate in OAF1/PIP2-dependent manner; promoter contains oleate response element consensus sequence; non-essential gene","termid":"PBO:0084822"}


id: GO:1901799
data:
  {"annotated_genes":["SJAG_03048","SJAG_00475","SJAG_02244","SJAG_01528","SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[77746,78397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[77642,107274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proteasomal protein catabolic process.","definition_xrefs":["PMID:21669198","GOC:TermGenie","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"negative regulation of proteolysis involved in protein catabolic process","termid":"GO:1903051"},{"relation_name":"negatively_regulates","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_01528":null,"SJAG_02244":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of proteasomal protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"down regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"down-regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down-regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"down-regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"downregulation of proteasomal protein catabolic process","type":"exact"},{"name":"downregulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"downregulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"inhibition of proteasomal protein catabolic process","type":"narrow"},{"name":"inhibition of proteasome-mediated protein catabolic process","type":"exact"},{"name":"inhibition of proteasome-mediated protein catabolism","type":"exact"},{"name":"negative regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"negative regulation of proteasome-mediated protein catabolism","type":"exact"}],"termid":"GO:1901799","terms_by_termid":{"GO:0032435":null,"GO:1904293":null,"GO:1905785":null}}


id: PBO:0004582
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.24.57","termid":"PBO:0004582"}


id: PBO:0070735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 5","termid":"PBO:0070735"}


id: GO:0140142
data:
  {"annotated_genes":["SJAG_03662","SJAG_00586","SJAG_03959","SJAG_01789","SJAG_01358","SJAG_03470","SJAG_01534","SJAG_01083","SJAG_02998","SJAG_00968","SJAG_04411","SJAG_03693","SJAG_04366","SJAG_00840","SJAG_02425","SJAG_02661","SJAG_01909"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76665,113865,117594,76496,71926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005049"},{"annotations":[93728,117595,71189,73063,72993,74097,93781,74121,75109,78133,96831,102877,114790,76672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061608"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a cargo between the nucleus and the cytoplasm by moving along with the cargo. The cargo can be either a RNA or a protein.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00586":null,"SJAG_00840":null,"SJAG_00968":null,"SJAG_01083":null,"SJAG_01358":null,"SJAG_01534":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_02425":null,"SJAG_02661":null,"SJAG_02998":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04366":null,"SJAG_04411":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"nucleocytoplasmic carrier activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0090631","GO:0061717"],"synonyms":[{"name":"miRNA transporter activity","type":"narrow"},{"name":"nucleocytoplasmic importin/exportin activity","type":"exact"},{"name":"pre-miRNA transporter activity","type":"narrow"}],"termid":"GO:0140142","terms_by_termid":{"GO:0005049":null,"GO:0061608":null}}


id: MOD:01889
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(2-succinyl)-L-cysteine, by addition of either fumaric acid or maleic acid.","definition_xrefs":["Unimod:957","PubMed:16624247","PubMed:20677745","PubMed:18448829","RESID:AA0561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-succinyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(1R)-1,2-dicarboxyethyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(2R)-2-{[(2R)-2-amino-2-carboxyethyl]sulfanyl}butanedioic acid","type":"exact"},{"name":"2-((2-amino-2-carboxyethyl)thio)butanedioic acid","type":"exact"},{"name":"2-amino-3-(1,2-dicarboxyethylthio)propanoic acid","type":"exact"},{"name":"MOD_RES S-(2-succinyl)cysteine","type":"exact"},{"name":"S-(1,2-dicarboxyethyl)cysteine","type":"exact"},{"name":"S-(2-succinyl)-L-cysteine","type":"exact"},{"name":"S-(2-succinyl)cysteine","type":"exact"},{"name":"S-[(2R)-2-succinyl]-L-cysteine","type":"exact"}],"termid":"MOD:01889"}


id: PBO:0053514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 502","termid":"PBO:0053514"}


id: PBO:0111909
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repxeat protein","termid":"PBO:0111909"}


id: PBO:0029326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation_at_mating_type_locus_during_mitotic_S_phase","termid":"PBO:0029326"}


id: PBO:0069671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 948, pseudogene","termid":"PBO:0069671"}


id: PR:O42832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent rRNA methyltransferase spb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.11","secondary_identifiers":["UniProtKB:O42832"],"synonyms":[{"name":"2'-O-ribose RNA methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosyl-L-methionine-dependent methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ3","type":"exact"}],"termid":"PR:O42832"}


id: MOD:02030
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively specifies the boundary conformation of two adjacent source amino acid residues, the second (C-term side) being a L-proline, where the carbonyl group of the amide bond of the N-side of the L-proline is positioned such that the organodiyl group is in the trans orientation (omega=180)","definition_xrefs":["PubMed:15735342","PubMed:5485910","ChEBI:83834","PubMed:15311922","PubMed:24116866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-peptidyl-L-proline","termid":"MOD:02030"}


id: MONDO:0009745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis 5 (CLN5-NCL) is a rare condition that affects the nervous system. Signs and symptoms of the condition generally develop between ages 4.5 and 7 years, although later onset cases have been reported. Affected people may experience loss of muscle coordination (ataxia), seizures that do not respond to medications, muscle twitches (myoclonus), visual impairment, and cognitive/motor decline. It occurs predominantly in the Finnish population. CLN5-NCL is caused by changes (mutations) in the CLN5 gene and is inherited in an autosomal recessive manner. Treatment options are limited to therapies that can help relieve some of the symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"late infantile neuronal ceroid lipofuscinosis","termid":"MONDO:0015674"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis","termid":"MONDO:0016295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0002525","MONDO:0005559"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis 5","secondary_identifiers":["DOID:0110728","MEDGEN:376792","Orphanet:228360","UMLS:C1850442","OMIM:256731","MESH:C575534","GARD:1223"],"synonyms":[{"name":"CLN5","type":"exact"},{"name":"CLN5 disease","type":"related"},{"name":"CLN5 disease, adult","type":"related"},{"name":"CLN5 disease, juvenile","type":"related"},{"name":"CLN5 disease, late infantile (subtype)","type":"related"},{"name":"CLN5 neuronal ceroid lipofuscinosis","type":"exact"},{"name":"Finnish Vlincl","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, 5","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, 5, variable Age at onset","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, type 5","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 5 variable age of onset","type":"exact"},{"name":"neuronal ceroid lipofuscinosis Finnish variant","type":"related"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in CLN5","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 5","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, late infantile, Finnish variant","type":"related"}],"termid":"MONDO:0009745","xrefs":{"Monarch":{"xref_id":"0009745"}}}


id: MONDO:1012893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in dogs due to a mutation in the KRT1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, dog","termid":"MONDO:1012978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, KRT1-related, dog","secondary_identifiers":["OMIA:002425-9615"],"synonyms":[{"name":"non-epidermolytic ichthyosis, dog","type":"related"}],"termid":"MONDO:1012893","xrefs":{"Monarch":{"xref_id":"1012893"}}}


id: GO:0106122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a cobalamin metabolic process.","definition_xrefs":["PMID:29056341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vitamin metabolic process","termid":"GO:0046137"},{"relation_name":"is_a","term_name":"regulation of cobalamin metabolic process","termid":"GO:0106064"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole metabolic process","termid":"GO:1901402"},{"relation_name":"negatively_regulates","term_name":"cobalamin metabolic process","termid":"GO:0009235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of cobalamin metabolic process","termid":"GO:0106122"}


id: PBO:0044085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A5","termid":"PBO:0044085"}


id: PBO:0071773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 1","termid":"PBO:0071773"}


id: PBO:0051679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INHBA antisense RNA 1","termid":"PBO:0051679"}


id: PBO:0088656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein, chaperone for V-type ATPase, BIG1 family","termid":"PBO:0088656"}


id: PBO:0084329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Key component of the RAM signaling network; required for proper cell morphogenesis and cell separation after mitosis","termid":"PBO:0084329"}


id: GO:1902566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil activation.","definition_xrefs":["GOC:TermGenie","PMID:16254138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil activation","termid":"GO:1902566"}


id: GO:0090249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the controlled self-propelled movement of a cell that contributes to somitogenic axis elongation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"cell migration involved in somitogenic axis elongation","termid":"GO:0090248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell migration involved in somitogenic axis elongation","synonyms":[{"name":"regulation of cell motility involved in somitogenic axis elongation","type":"broad"}],"termid":"GO:0090249"}


id: PBO:0053898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1186","termid":"PBO:0053898"}


id: PBO:0048950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 1","termid":"PBO:0048950"}


id: PBO:0083310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF ARG5,6/YER069W","termid":"PBO:0083310"}


id: PBO:0082502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase (II) epsilon; a chromosomal DNA replication polymerase that exhibits processivity and proofreading exonuclease activity; participates in leading-strand synthesis during DNA replication; also involved in DNA synthesis during DNA repair; interacts extensively with Mrc1p","termid":"PBO:0082502"}


id: PBO:0046264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 3","termid":"PBO:0046264"}


id: PBO:0067610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 782, pseudogene","termid":"PBO:0067610"}


id: SO:0001843
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"MERGED DEFINITION:\\nTARGET DEFINITION: A promoter element with consensus sequence TGACGTCA; bound by the ATF/CREB family of transcription factors.\\n--------------------\\nSOURCE DEFINITION: A promoter element that contains a core sequence TGACGT, bound by a protein complex that regulates transcription of genes encoding PKA pathway components.","definition_xrefs":["PMID:11483993","PMID:11483355","PMID:15448137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRE","secondary_identifiers":["SO:0001900"],"synonyms":[{"name":"ATF/CRE site","type":"exact"},{"name":"Atf1/Pcr1 recognition motif","type":"exact"},{"name":"M26 binding site","type":"exact"},{"name":"M26_binding_site","type":"exact"},{"name":"cyclic AMP response element","type":"exact"},{"name":"m26 site","type":"exact"}],"termid":"SO:0001843"}


id: GO:0047433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-methyl-2-oxopentanoate + H+ = 2-methylbutanal + CO2.","definition_xrefs":["RHEA:21108","EC:4.1.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"branched-chain-2-oxoacid decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03894","MetaCyc:4.1.1.72-RXN"],"synonyms":[{"name":"(3S)-3-methyl-2-oxopentanoate carboxy-lyase (2-methylbutanal-forming)","type":"related"},{"name":"(3S)-3-methyl-2-oxopentanoate carboxy-lyase activity","type":"related"},{"name":"BCKA","type":"related"},{"name":"branched-chain alpha-keto acid decarboxylase activity","type":"related"},{"name":"branched-chain keto acid decarboxylase activity","type":"related"},{"name":"branched-chain oxo acid decarboxylase activity","type":"related"}],"termid":"GO:0047433"}


id: FYECO:0000165
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium sulfide (Na2S) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na2S","synonyms":[{"name":"sodium sulfide added","type":"exact"}],"termid":"FYECO:0000165"}


id: PBO:0000349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Gef2","termid":"PBO:0000349"}


id: PBO:0063206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 2","termid":"PBO:0063206"}


id: PBO:0003297
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary spastic paraplegia","termid":"PBO:0003297"}


id: GO:0046585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of enniatins, any of various cyclodepsipeptide antibiotics from Fusarium species that function as ionophores.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"enniatin metabolic process","termid":"GO:0046584"},{"relation_name":"is_a","term_name":"depsipeptide biosynthetic process","termid":"GO:0050763"},{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"enniatin biosynthetic process","synonyms":[{"name":"enniatin anabolism","type":"exact"},{"name":"enniatin biosynthesis","type":"exact"},{"name":"enniatin formation","type":"exact"},{"name":"enniatin synthesis","type":"exact"}],"termid":"GO:0046585"}


id: GO:0044468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts blood coagulation in another organism via the action of a venom.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of hemostasis","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of blood coagulation","synonyms":[{"name":"envenomation perturbing blood coagulation","type":"exact"},{"name":"envenomation resulting in modulation of blood coagulation in another organism","type":"exact"},{"name":"envenomation resulting in modulation of blood coagulation in other organism","type":"exact"},{"name":"envenomation resulting in perturbation of blood coagulation","type":"exact"},{"name":"envenomation resulting in regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0044468"}


id: PBO:0086410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GPI-anchored aspartic protease; member of the yapsin family of proteases involved in cell wall growth and maintenance","termid":"PBO:0086410"}


id: MONDO:0800434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cancer, familial, susceptibility to, 2","secondary_identifiers":["MEDGEN:382627","UMLS:C2675522"],"termid":"MONDO:0800434","xrefs":{"Monarch":{"xref_id":"0800434"}}}


id: GO:1905940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gonad development.","definition_xrefs":["PMID:15342467","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of gonad development","termid":"GO:1905939"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gonad development","synonyms":[{"name":"down regulation of gonad development","type":"exact"},{"name":"down regulation of gonadogenesis","type":"exact"},{"name":"down-regulation of gonad development","type":"exact"},{"name":"down-regulation of gonadogenesis","type":"exact"},{"name":"downregulation of gonad development","type":"exact"},{"name":"downregulation of gonadogenesis","type":"exact"},{"name":"inhibition of gonad development","type":"narrow"},{"name":"inhibition of gonadogenesis","type":"narrow"},{"name":"negative regulation of gonadogenesis","type":"exact"}],"termid":"GO:1905940"}


id: GO:0007409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells.","definition_xrefs":["ISBN:0198506732","GOC:pr","GOC:pg","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonogenesis","secondary_identifiers":["GO:0007410"],"synonyms":[{"name":"axon growth","type":"narrow"},{"name":"axon morphogenesis","type":"exact"},{"name":"neuron long process generation","type":"exact"}],"termid":"GO:0007409"}


id: GO:0047994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA + H2O = 3-hydroxy-3-methylglutarate + CoA + H+.","definition_xrefs":["EC:3.1.2.5","RHEA:16305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02083","MetaCyc:HYDROXYMETHYLGLUTARYL-COA-HYDROLASE-RXN"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA hydrolase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA hydrolase activity","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl coenzyme A deacylase activity","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl coenzyme A hydrolase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A deacylase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A hydrolase activity","type":"related"}],"termid":"GO:0047994"}


id: GO:0002676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a chronic inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"regulates","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chronic inflammatory response","termid":"GO:0002676"}


id: MOD:00295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-octanoyl-L-serine.","definition_xrefs":["PubMed:10604470","Unimod:426#S","PubMed:12716131","RESID:AA0290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-octanoylated residue","termid":"MOD:00669"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-octanoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(octanoyloxy)propanoic acid","type":"exact"},{"name":"L-serine octanoate ester","type":"exact"},{"name":"LIPID O-octanoyl serine","type":"exact"},{"name":"O-octanoyl-L-serine","type":"exact"},{"name":"O-octanoylated L-serine","type":"exact"},{"name":"O3-octanoyl-L-serine","type":"exact"},{"name":"OOctSer","type":"exact"},{"name":"Octanoyl","type":"related"},{"name":"octanoyl","type":"related"}],"termid":"MOD:00295"}


id: MONDO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An otitis externa which involves infection of the external ear that has spread to involve the skull bone containing part of the ear canal, the middle ear, and the inner ear. It is caused by the bacteria Pseudomonas. This is common in people with weakened immune systems and in older people with diabetes.","definition_xrefs":["DOID:10516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otitis externa","termid":"MONDO:0004795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant otitis externa","secondary_identifiers":["MEDGEN:509950","icd11.foundation:984580942","SCTID:94146005","ICD10CM:H60.2","ICD9:380.14","UMLS:C0155395"],"termid":"MONDO:0001050","xrefs":{"Monarch":{"xref_id":"0001050"}}}


id: FYPO:0005012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H4 acetylation during vegetative growth","termid":"FYPO:0005011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H4-K5 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H4-K5 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H4K5 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H4-K5 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005012"}


id: MONDO:0035293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infection-related hemolytic uremic syndrome","termid":"MONDO:0034103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"streptococcus pneumoniae-associated hemolytic uremic syndrome","secondary_identifiers":["UMLS:C5680164","GARD:22235","ICD10CM:D58.8","Orphanet:544493","MEDGEN:1842720"],"synonyms":[{"name":"S. pneumoniae-associated HUS","type":"exact"},{"name":"SP-HUS","type":"exact"}],"termid":"MONDO:0035293","xrefs":{"Monarch":{"xref_id":"0035293"}}}


id: PBO:0073472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan beta","termid":"PBO:0073472"}


id: MONDO:0011070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any van Maldergem syndrome in which the cause of the disease is a mutation in the DCHS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"van Maldergem syndrome","termid":"MONDO:0017813"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van Maldergem syndrome 1","secondary_identifiers":["DOID:0080585","OMIM:601390","MEDGEN:1644627","UMLS:C4551950"],"synonyms":[{"name":"Cerebrofacioarticular syndrome","type":"related"},{"name":"DCHS1 van Maldergem syndrome","type":"exact"},{"name":"VAN Maldergem syndrome 1","type":"related"},{"name":"VMLDS1","type":"related"},{"name":"Van Maldergem syndrome type 1","type":"exact"},{"name":"van Maldergem syndrome 1","type":"exact"},{"name":"van Maldergem syndrome caused by mutation in DCHS1","type":"exact"}],"termid":"MONDO:0011070","xrefs":{"Monarch":{"xref_id":"0011070"}}}


id: PBO:0080519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 5, pseudogene","termid":"PBO:0080519"}


id: PBO:0068082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 388","termid":"PBO:0068082"}


id: MONDO:0012843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any childhood absence epilepsy in which the cause of the disease is a mutation in the GABRB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, childhood absence, susceptibility to, 5","secondary_identifiers":["OMIM:612269","MEDGEN:393654","UMLS:C2677087"],"synonyms":[{"name":"ECA5","type":"exact"},{"name":"GABRB3 childhood absence epilepsy","type":"related"},{"name":"childhood absence epilepsy caused by mutation in GABRB3","type":"exact"},{"name":"epilepsy, childhood absence, susceptibility to, 5","type":"exact"},{"name":"epilepsy, childhood absence, susceptibility to, type 5","type":"exact"},{"name":"susceptibility to childhood absence epilepsy 5","type":"exact"}],"termid":"MONDO:0012843","xrefs":{"Monarch":{"xref_id":"0012843"}}}


id: PBO:0075214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin gamma 2","termid":"PBO:0075214"}


id: PBO:0087255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in regulation of ion transport across plasma membrane; carboxyl terminus is essential for glucose-dependent Pma1p activation via phosphorylation of Pma1p-Ser899; enhances spermine uptake; PTK2 has a paralog, PTK1, that arose from the whole genome duplication","termid":"PBO:0087255"}


id: GO:1900940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"positively_regulates","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of (Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"activation of (Z)-nonadeca-1,14-diene metabolic process","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900940"}


id: PBO:0074016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 10","termid":"PBO:0074016"}


id: GO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell differentiation process that results in commitment of a cell to become part of the mesoderm.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in formation of primary germ layer","termid":"GO:0060795"},{"relation_name":"part_of","term_name":"mesodermal cell differentiation","termid":"GO:0048333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell fate commitment","synonyms":[{"name":"mesoderm cell fate commitment","type":"exact"}],"termid":"GO:0001710"}


id: GO:0072555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a 17-beta-ketosteroid + NADPH + H+ = a 17-beta-hydroxysteroid + NADP+.","definition_xrefs":["GOC:kad","PMID:17074428"],"gene_count":0,"genotype_count":0,"name":"obsolete 17-beta-ketosteroid reductase (NADPH) activity (obsolete GO:0072555)","synonyms":[{"name":"7beta-ketosteroid reductase activity","type":"exact"}],"termid":"GO:0072555"}


id: GO:0017128
data:
  {"annotated_genes":["SJAG_03100","SJAG_03076","SJAG_01470"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73530,101738,103912],"is_not":false,"summary":null,"term":"GO:0017128"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phospholipids from one membrane bilayer leaflet to the other, by an ATP-independent mechanism.","definition_xrefs":["GOC:cjm","PMID:20043909","PMID:20302864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"intramembrane lipid transporter activity","termid":"GO:0140303"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01470":null,"SJAG_03076":null,"SJAG_03100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140303"],"is_obsolete":false,"name":"phospholipid scramblase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0017128","terms_by_termid":{"GO:0017128":null}}


id: PR:Q9Y817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rav1 gene.","definition_xrefs":["UniProtKB:Q9Y817","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of V-ATPase in vacuolar membrane protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.10","synonyms":[{"name":"RAVE complex subunit rav1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rav1","type":"exact"}],"termid":"PR:Q9Y817"}


id: PBO:0089075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex subunit Taf9","termid":"PBO:0089075"}


id: PBO:0052463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 10","termid":"PBO:0052463"}


id: FYPO:0002322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-farnesyl diphosphate (FPP) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular FPP level","synonyms":[{"name":"decreased cellular 2-trans,6-trans-farnesyl diphosphate level","type":"exact"},{"name":"decreased cellular FPP accumulation","type":"related"},{"name":"decreased cellular FPP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular FPP level during vegetative growth","type":"exact"},{"name":"decreased cellular farnesyl diphosphate level","type":"broad"},{"name":"decreased cellular farnesyl pyrophosphate level","type":"broad"},{"name":"reduced cellular FPP level","type":"exact"}],"termid":"FYPO:0002322"}


id: GO:0042841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-glucuronate, the D-enantiomer of glucuronate.","definition_xrefs":["GOC:jl","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucuronate metabolic process","termid":"GO:0042839"},{"relation_name":"is_a","term_name":"glucuronate biosynthetic process","termid":"GO:0046399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-glucuronate biosynthetic process","synonyms":[{"name":"D-glucuronate anabolism","type":"exact"},{"name":"D-glucuronate biosynthesis","type":"exact"},{"name":"D-glucuronate formation","type":"exact"},{"name":"D-glucuronate synthesis","type":"exact"}],"termid":"GO:0042841"}


id: PATO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's location within another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"located in","termid":"PATO:0002261"}


id: PBO:0066985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 288","termid":"PBO:0066985"}


id: PBO:0011519
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in prokaryotes","termid":"PBO:0011519"}


id: FYPO:0001559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methionine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal methionine import","synonyms":[{"name":"normal L-methionine import","type":"exact"},{"name":"normal L-methionine import across plasma membrane","type":"exact"},{"name":"normal methionine import during mitotic cell cycle","type":"related"},{"name":"normal methionine import during vegetative growth","type":"exact"},{"name":"normal methionine import into cell","type":"exact"},{"name":"normal methionine uptake","type":"exact"}],"termid":"FYPO:0001559"}


id: _global:genome_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genome_of","termid":"_global:genome_of"}


id: PR:O94315
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An oxidoreductase YdbC that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C215.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.11c","secondary_identifiers":["UniProtKB:O94315"],"synonyms":[{"name":"Spom972h-ydbC","type":"exact"}],"termid":"PR:O94315"}


id: GO:0051148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of muscle cell differentiation.","definition_xrefs":["CL:0000187","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"negatively_regulates","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle cell differentiation","synonyms":[{"name":"down regulation of muscle cell differentiation","type":"exact"},{"name":"down-regulation of muscle cell differentiation","type":"exact"},{"name":"downregulation of muscle cell differentiation","type":"exact"},{"name":"inhibition of muscle cell differentiation","type":"narrow"}],"termid":"GO:0051148"}


id: SO:0000362
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone constructed from more than one mRNA. Usually an experimental artifact.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invalidated","termid":"SO:0000790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_by_chimeric_cDNA","synonyms":[{"name":"invalidated by chimeric cDNA","type":"exact"}],"termid":"SO:0000362"}


id: MONDO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or subacute inflammatory process of the central nervous system characterized histologically by multiple foci of perivascular demyelination. Symptom onset usually occurs several days after an acute viral infection or immunization, but it may coincide with the onset of infection or rarely no antecedent event can be identified. Clinical manifestations include confusion, somnolence, fever, nuchal rigidity, and involuntary movements. The illness may progress to coma and eventually be fatal. (Adams et al., Principles of Neurology, 6th ed, p921)","definition_xrefs":["MESH:D004673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-vaccinal encephalitis","secondary_identifiers":["DOID:13664","UMLS:C0751101","ICD9:323.51","MEDGEN:152946","SCTID:31367003"],"synonyms":[{"name":"encephalitis following immunisation procedures","type":"exact"},{"name":"encephalitis following immunization procedures","type":"exact"},{"name":"postvaccinal encephalomyelitis","type":"exact"}],"termid":"MONDO:0001773","xrefs":{"Monarch":{"xref_id":"0001773"}}}


id: PBO:0045259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 2 beta","termid":"PBO:0045259"}


id: PBO:0091682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA (CUT) Cti6","termid":"PBO:0091682"}


id: GO:0016610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase is tetrameric with an alpha2-beta2 structure and nitrogenase reductase is a homodimer, and both are associated with metal ions, which differ between species. Both proteins are required for the enzyme activity of the complex, the formation of oxidized ferredoxin and ammonia from reduced ferredoxin and nitrogen.","definition_xrefs":["PMID:10852721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nitrogenase complex","termid":"GO:0016610"}


id: GO:0140983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Ca2+(in) + Mn2+(out) = Ca2+(out) + Mn2+(in).","definition_xrefs":["PMID:30755481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"calcium:manganese antiporter activity","secondary_identifiers":["RHEA:73059"],"synonyms":[{"name":"manganese:calcium antiporter activity","type":"exact"}],"termid":"GO:0140983"}


id: PBO:0078386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-1","termid":"PBO:0078386"}


id: PBO:0000777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA endonuclease III","termid":"PBO:0000777"}


id: PBO:0066969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 271","termid":"PBO:0066969"}


id: PR:O60106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC14F5.10c gene.","definition_xrefs":["UniProtKB:O60106","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and RING finger protein C14F5.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.10c","synonyms":[{"name":"Spom972h-SPBC14F5.10c","type":"exact"}],"termid":"PR:O60106"}


id: GO:1902971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA duplex unwinding involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic DNA replication DNA duplex unwinding (obsolete GO:1902971)","synonyms":[{"name":"DNA duplex unwinding involved in mitotic DNA replication","type":"exact"},{"name":"DNA duplex unwinding involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902971"}


id: GO:0060076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell increases the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"excitatory synapse","secondary_identifiers":["Wikipedia:Excitatory_synapse"],"termid":"GO:0060076"}


id: PBO:0083015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defining member of the SET3 histone deacetylase complex; which is a meiosis-specific repressor of sporulation genes; necessary for efficient transcription by RNAPII; one of two yeast proteins that contains both SET and PHD domains; SET3 has a paralog, SET4, that arose from the whole genome duplication","termid":"PBO:0083015"}


id: PBO:0054803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2216","termid":"PBO:0054803"}


id: MONDO:0016545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukoencephalopathy-palmoplantar keratoderma syndrome is a rare, genetic epidermal disease characterized by early childhood-onset of punctate palmoplantar keratoderma in association with adult-onset leukoencephalopathy manifested by progressive tetrapyramidal syndrome and cognitive deterioration.","definition_xrefs":["Orphanet:2386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"leukoencephalopathy-palmoplantar keratoderma syndrome","secondary_identifiers":["GARD:3232","MEDGEN:1652044","UMLS:C4749769"],"synonyms":[{"name":"leukoencephalopathy palmoplantar keratoderma","type":"related"}],"termid":"MONDO:0016545","xrefs":{"Monarch":{"xref_id":"0016545"}}}


id: GO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tyramine + L-ascorbate + O2 = (R)-octopamine + L-dehydroascorbate + H2O.","definition_xrefs":["RHEA:57132","PMID:10745161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tyramine-beta hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14645"],"termid":"GO:0004836"}


id: GO:0010425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group, to C-5 or N-4, of a cytosine located within a CNG sequence in a DNA molecule. N stands for any nucleotide.","definition_xrefs":["GOC:tb","GOC:dph","PMID:17239600"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation on cytosine within a CNG sequence (obsolete GO:0010425)","synonyms":[{"name":"cytosine methylation within a CNG sequence","type":"exact"}],"termid":"GO:0010425"}


id: FYPO:0005904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the actomyosin contractile ring is normal (i.e. indistinguishable from wild type). Normally, proteins including actin and myosin are turned over between the contractile ring and elsewhere in the cytoplasm; exchange is faster during than before ring constriction.","definition_xrefs":["PomBase:mah","PMID:19570908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal rate of protein exchange in actomyosin contractile ring","synonyms":[{"name":"normal rate of protein exchange in actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"normal rate of protein exchange in actomyosin contractile ring during vegetative growth","type":"exact"}],"termid":"FYPO:0005904"}


id: PBO:0040412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit a2","termid":"PBO:0040412"}


id: GO:1900751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a 4-(trimethylammonio)butanoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:16365044","PMID:20829798","GOC:TermGenie","PMID:20357772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"4-(trimethylammonio)butanoate transport","synonyms":[{"name":"4-(N-trimethylamino)butyrate transport","type":"exact"},{"name":"4-butyrobetaine transport","type":"exact"},{"name":"Actinine transport","type":"related"},{"name":"C7H15NO2 transport","type":"related"},{"name":"butyrobetaine transport","type":"related"},{"name":"deoxycarnitine transport","type":"related"},{"name":"gamma-Butyrobetain transport","type":"exact"},{"name":"gamma-butyrobetaine transport","type":"exact"}],"termid":"GO:1900751"}


id: MONDO:0009910
data:
  {"annotated_genes":["SJAG_04934"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86489],"is_not":false,"summary":null,"term":"MONDO:0009910"}]},"cv_name":"mondo","definition":"Wiedemann-Rautenstrauch syndrome is a very rare disorder with features of premature aging recognizable at birth, decreased subcutaneous fat, hypotrichosis, relative macrocephaly and dysmorphism.","definition_xrefs":["Orphanet:3455"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"},{"relation_name":"is_a","term_name":"progeria","termid":"MONDO:0020732"},{"relation_name":"is_a","term_name":"POLR3A-related disorder","termid":"MONDO:0700276"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0019303","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"Wiedemann-Rautenstrauch syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:264090","SCTID:238874008","MEDGEN:140806","NORD:1852","NCIT:C121565","DOID:0081333","ICD9:259.8","MESH:C536423","UMLS:C0406586","GARD:330"],"synonyms":[{"name":"Wiedemann Rautenstrauch Syndrome","type":"exact"},{"name":"Wiedemann Rautenstrauch syndrome","type":"related"},{"name":"Wiedemann-Rautenstrauch syndrome","type":"exact"},{"name":"neonatal progeroid syndrome","type":"exact"},{"name":"progeroid syndrome neonatal","type":"related"},{"name":"progeroid syndrome, neonatal","type":"related"}],"termid":"MONDO:0009910","terms_by_termid":{"MONDO:0009910":null},"xrefs":{"Monarch":{"xref_id":"0009910"}}}


id: PBO:0067645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 819, pseudogene","termid":"PBO:0067645"}


id: PBO:0111764
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rrm RNA recognition motif","termid":"PBO:0111764"}


id: MONDO:0009296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"glycoprotein storage disease","secondary_identifiers":["OMIM:232900","SCTID:7810004","MESH:C565538","UMLS:C1856275","MEDGEN:343516"],"synonyms":[{"name":"glycoprotein storage disease","type":"exact"},{"name":"glycoprotein storage disorder","type":"exact"}],"termid":"MONDO:0009296","xrefs":{"Monarch":{"xref_id":"0009296"}}}


id: PBO:0054260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1645","termid":"PBO:0054260"}


id: PBO:0077903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase pseudogene 1","termid":"PBO:0077903"}


id: PBO:0030084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_tip","termid":"PBO:0030084"}


id: MONDO:0014432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"BBS2-related ciliopathy","termid":"MONDO:1040048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 2","secondary_identifiers":["GARD:821","MESH:C537910","OMIM:615981","UMLS:C2936863","DOID:0110124","MEDGEN:422453"],"synonyms":[{"name":"BBS","type":"related"},{"name":"BBS2","type":"exact"},{"name":"BBS2 Bardet-Biedl syndrome","type":"exact"},{"name":"Bardet-Biedl syndrome","type":"related"},{"name":"Bardet-Biedl syndrome 2","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBS2","type":"exact"},{"name":"Bardet-Biedl syndrome type 2","type":"exact"}],"termid":"MONDO:0014432","xrefs":{"Monarch":{"xref_id":"0014432"}}}


id: MONDO:0013243
data:
  {"annotated_genes":["SJAG_02919","SJAG_04567","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86638,86639,86640],"is_not":false,"summary":null,"term":"MONDO:0013243"}]},"cv_name":"mondo","definition":"Any neuronopathy, distal hereditary motor in which the cause of the disease is a mutation in the HSPB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy type 2","termid":"MONDO:0015352"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 2C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111209","MEDGEN:461969","GARD:18264","OMIM:613376","UMLS:C3150619"],"synonyms":[{"name":"HMN 2C","type":"related"},{"name":"HMN2C","type":"related"},{"name":"HSPB3 neuronopathy, distal hereditary motor","type":"exact"},{"name":"neuronopathy, distal hereditary motor caused by mutation in HSPB3","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type IIC","type":"related"},{"name":"neuropathy, distal hereditary motor, type 2C","type":"related"}],"termid":"MONDO:0013243","terms_by_termid":{"MONDO:0013243":null},"xrefs":{"Monarch":{"xref_id":"0013243"}}}


id: PBO:0046093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 4","termid":"PBO:0046093"}


id: PBO:0061488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor interacting protein 1","termid":"PBO:0061488"}


id: GO:0098718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of serine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"serine import across plasma membrane","secondary_identifiers":["GO:0061491"],"synonyms":[{"name":"serine import into cell","type":"exact"}],"termid":"GO:0098718"}


id: MONDO:0004606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pyoderma gangrenosum (obsolete MONDO:0004606)","termid":"MONDO:0004606","xrefs":{"Monarch":{"xref_id":"0004606"}}}


id: FYPO:0006892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which inositol hexakisphosphate kinase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abolished inositol hexakisphosphate kinase activity","synonyms":[{"name":"inositol hexakisphosphate kinase activity abolished","type":"exact"}],"termid":"FYPO:0006892"}


id: GO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The insertion of one or two non-coded nucleotides during the transcription of a mitochondrial rRNA. Such additions are known to occur in myxomycetes such as Physarum, Didymium, and Stemonitis.","definition_xrefs":["PMID:8306965","GOC:curators","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification","termid":"GO:0000154"},{"relation_name":"is_a","term_name":"RNA nucleotide insertion","termid":"GO:0070705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"cotranscriptional mitochondrial rRNA nucleotide insertion","termid":"GO:0002110"}


id: GO:0046197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen and synthesized by some higher plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orcinol metabolic process","termid":"GO:0018940"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orcinol biosynthetic process","synonyms":[{"name":"orcinol anabolism","type":"exact"},{"name":"orcinol biosynthesis","type":"exact"},{"name":"orcinol formation","type":"exact"},{"name":"orcinol synthesis","type":"exact"}],"termid":"GO:0046197"}


id: PBO:0030336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030336"}


id: PBO:0051485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 3","termid":"PBO:0051485"}


id: PBO:0114494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress-responsive eisosome organizer and core component; eisosomes are large immobile patch structures at the cell cortex associated with endocytosis; phosphorylated on Thr233 upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways; member of the BAR domain family","termid":"PBO:0114494"}


id: PBO:0031606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase","termid":"PBO:0031606"}


id: MONDO:0012196
data:
  {"annotated_genes":["SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85650],"is_not":false,"summary":null,"term":"MONDO:0012196"}]},"cv_name":"mondo","definition":"Any auditory neuropathy in which the cause of the disease is a mutation in the DIAPH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"},{"relation_name":"is_a","term_name":"auditory neuropathy","termid":"MONDO:0021944"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant auditory neuropathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18127","DOID:0060690","MEDGEN:322984","UMLS:C1836743","MESH:C563790","OMIM:609129"],"synonyms":[{"name":"AUNA1","type":"exact"},{"name":"DIAPH3 auditory neuropathy","type":"exact"},{"name":"NSDAN","type":"exact"},{"name":"auditory neuropathy caused by mutation in DIAPH3","type":"exact"},{"name":"auditory neuropathy, autosomal dominant, 1","type":"related"},{"name":"auditory neuropathy, autosomal dominant, type 1","type":"exact"},{"name":"auditory neuropathy, nonsyndromic dominant","type":"related"},{"name":"autosomal dominant auditory neuropathy type 1","type":"exact"},{"name":"nonsyndromic dominant auditory neuropathy","type":"exact"}],"termid":"MONDO:0012196","terms_by_termid":{"MONDO:0012196":null},"xrefs":{"Monarch":{"xref_id":"0012196"}}}


id: PBO:0080572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and HMG-box DNA binding protein 1","termid":"PBO:0080572"}


id: MONDO:0033554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 73b with defective neutrophil chemotaxis and lymphopenia","secondary_identifiers":["UMLS:C5436549","DOID:0112061","MEDGEN:1740566","OMIM:618986"],"synonyms":[{"name":"IMD73B","type":"exact"},{"name":"immunodeficiency 73b with defective neutrophil chemotaxis and lymphopenia","type":"exact"}],"termid":"MONDO:0033554","xrefs":{"Monarch":{"xref_id":"0033554"}}}


id: PBO:0045092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 3","termid":"PBO:0045092"}


id: GO:0048009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to an insulin-like growth factor receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"insulin-like growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-2404192"],"synonyms":[{"name":"IGF receptor signaling pathway","type":"exact"},{"name":"IGF receptor signalling pathway","type":"exact"}],"termid":"GO:0048009"}


id: FYECO:0000351
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which terconazol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ terconazole","termid":"FYECO:0000351"}


id: PBO:0042266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 1","termid":"PBO:0042266"}


id: PBO:0043126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding family member 4","termid":"PBO:0043126"}


id: MONDO:0000535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tonsil squamous cell carcinoma (obsolete MONDO:0000535)","termid":"MONDO:0000535","xrefs":{"Monarch":{"xref_id":"0000535"}}}


id: MONDO:0006566
data:
  {"annotated_genes":["SJAG_05011","SJAG_01878","SJAG_01474","SJAG_03158","SJAG_04565","SJAG_03352","SJAG_00580","SJAG_04167","SJAG_00104","SJAG_04865","SJAG_02698","SJAG_01938","SJAG_03349","SJAG_02488"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007048"},{"annotations":[85852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[86343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[86058,86057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[85357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"},{"annotations":[87056,87058,87057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"},{"annotations":[87423,87424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"},{"annotations":[86472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013868"},{"annotations":[86334,86335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","definition":"A skin disorder consisting of hypertrophy of the stratum corneum of the skin.","definition_xrefs":["NCIT:C34745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"keratinization disease","termid":"MONDO:0045011"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00580":null,"SJAG_01474":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_03158":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_04167":null,"SJAG_04565":null,"SJAG_04865":null,"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:9625","DOID:161","UMLS:C0022593","SCTID:254666005","MESH:D007642","EFO:1000720"],"synonyms":[{"name":"keratoderma","type":"exact"}],"termid":"MONDO:0006566","terms_by_termid":{"MONDO:0007048":null,"MONDO:0007858":null,"MONDO:0008293":null,"MONDO:0008416":null,"MONDO:0009440":null,"MONDO:0013868":null,"MONDO:0014131":null,"MONDO:0014713":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0006566"}}}


id: MONDO:0017101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated focal cortical dysplasia type II","termid":"MONDO:0011818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia type IIa","secondary_identifiers":["UMLS:C1846386","GARD:17270","Orphanet:269001","NANDO:1200568","MEDGEN:375876"],"synonyms":[{"name":"FCD type IIa","type":"exact"}],"termid":"MONDO:0017101","xrefs":{"Monarch":{"xref_id":"0017101"}}}


id: PBO:0062216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AM member 1 pseudogene","termid":"PBO:0062216"}


id: PBO:0054740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2149","termid":"PBO:0054740"}


id: GO:2001040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to drug","termid":"GO:2001025"},{"relation_name":"is_a","term_name":"regulation of cellular response to drug","termid":"GO:2001038"},{"relation_name":"positively_regulates","term_name":"cellular response to xenobiotic stimulus","termid":"GO:0071466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to drug","termid":"GO:2001040"}


id: GO:0032119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of zinc ion (obsolete GO:0032119)","termid":"GO:0032119"}


id: MONDO:1012809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in cats due to a mutation in the MYH7 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, domestic cat","termid":"MONDO:1010459"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, MYH7-related, domestic cat","secondary_identifiers":["OMIA:002212-9685"],"synonyms":[{"name":"cardiomyopathy, hypertrophic, MYH7-related, domestic cat","type":"exact"}],"termid":"MONDO:1012809","xrefs":{"Monarch":{"xref_id":"1012809"}}}


id: GO:1904827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen sulfide biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:22034194","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of hydrogen sulfide biosynthetic process","termid":"GO:1904826"},{"relation_name":"negatively_regulates","term_name":"hydrogen sulfide biosynthetic process","termid":"GO:0070814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of hydrogen sulfide biosynthetic process","synonyms":[{"name":"down regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down regulation of hydrogen sulfide formation","type":"exact"},{"name":"down regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide formation","type":"exact"},{"name":"down-regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide anabolism","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide formation","type":"exact"},{"name":"downregulation of hydrogen sulfide synthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"inhibition of hydrogen sulfide anabolism","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthetic process","type":"narrow"},{"name":"inhibition of hydrogen sulfide formation","type":"narrow"},{"name":"inhibition of hydrogen sulfide synthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthetic process","type":"narrow"},{"name":"negative regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"negative regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulfide formation","type":"exact"},{"name":"negative regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:1904827"}


id: MONDO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Beta-thalassemias with other manifestations are a group of beta-thalassemias associated with another disorder.","definition_xrefs":["Orphanet:231386"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-thalassemia with other manifestations (obsolete MONDO:0016492)","termid":"MONDO:0016492","xrefs":{"Monarch":{"xref_id":"0016492"}}}


id: MONDO:0015972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A form of anemia (disease) that is both rare and inborn.","definition_xrefs":["MONDO:patterns/rare_genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare constitutional anemia (obsolete MONDO:0015972)","secondary_identifiers":["Orphanet:183651"],"synonyms":[{"name":"rare constitutional anemia (disease)","type":"exact"},{"name":"rare genetic anemia (disease)","type":"exact"},{"name":"rare inborn anemia (disease)","type":"exact"}],"termid":"MONDO:0015972","xrefs":{"Monarch":{"xref_id":"0015972"}}}


id: PBO:0056514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscleblind like splicing regulator 3","termid":"PBO:0056514"}


id: GO:0042316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any antibiotic that contains the condensed beta-lactamthiazolidine ring system. Penicillins are produced naturally during the growth of various microfungi of the genera Penicillium and Aspergillus.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"penicillin metabolic process","synonyms":[{"name":"penicillin metabolism","type":"exact"}],"termid":"GO:0042316"}


id: MONDO:1010503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocardial fibroelastosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial fibroelastosis, non-human animal","termid":"MONDO:1010027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocardial fibroelastosis, dog","secondary_identifiers":["OMIA:001803-9615"],"termid":"MONDO:1010503","xrefs":{"Monarch":{"xref_id":"1010503"}}}


id: PBO:0086386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative calcium channel involved in calcium release under hypotonic stress; required for uptake of FAD into endoplasmic reticulum; involved in cell wall maintenance; FLC2 has a paralog, YOR365C, that arose from the whole genome duplication","termid":"PBO:0086386"}


id: PBO:0071924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 1","termid":"PBO:0071924"}


id: PATO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000176 metabolic function (obsolete PATO:0000176)","termid":"PATO:0000176"}


id: GO:0102130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a malonyl-[acp] = S-adenosyl-L-homocysteine + a malonyl-[acp] methyl ester.","definition_xrefs":["GOC:pz","RHEA:17105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"malonyl-CoA methyltransferase activity","secondary_identifiers":["EC:2.1.1.197","MetaCyc:RXN-11475"],"termid":"GO:0102130"}


id: PBO:0043577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 1 chain","termid":"PBO:0043577"}


id: GO:0052349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of reactive oxygen species as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont reactive oxygen species production (obsolete GO:0052349)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont AOS production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont ROI production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont ROS production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont active oxygen species production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont metabolic burst","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont oxidative burst","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont reactive oxidative species production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont reactive oxygen intermediate production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont reactive oxygen species production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont respiratory burst","type":"exact"}],"termid":"GO:0052349"}


id: SO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial LSU rRNA is an RNA component of the large subunit of mitochondrial ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA","termid":"SO:0002128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_LSU_rRNA","synonyms":[{"name":"MT LSU rRNA","type":"exact"},{"name":"mitochondrial LSU rRNA","type":"exact"},{"name":"mitochondrial large subunit rRNA","type":"exact"}],"termid":"SO:0002345"}


id: GO:0034243
data:
  {"annotated_genes":["SJAG_03118","SJAG_03967","SJAG_01151","SJAG_01149","SJAG_01707","SJAG_00150","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[106373,71338,79909,117325,78404,71883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription elongation","termid":"GO:0032784"},{"relation_name":"regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01707":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0090039"],"synonyms":[{"name":"regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0034243","terms_by_termid":{"GO:0032968":null,"GO:0034244":null}}


id: PBO:0090229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase Aco1","termid":"PBO:0090229"}


id: GO:0033100
data:
  {"annotated_genes":["SJAG_01009","SJAG_00411","SJAG_02165","SJAG_02629","SJAG_00545"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94275,105635,106838,108238],"is_not":false,"summary":null,"term":"GO:0033100"},{"annotations":[78126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"}]},"cv_name":"cellular_component","definition":"A Gcn5-independent multisubunit complex that catalyzes the acetylation of histone H3. The budding yeast complex includes Sas3p, Taf30p, and Yng1p.","definition_xrefs":["PMID:10817755","PMID:17157260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00411":null,"SJAG_00545":null,"SJAG_01009":null,"SJAG_02165":null,"SJAG_02629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NuA3 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033100","terms_by_termid":{"GO:0033100":null,"GO:1990467":null}}


id: PBO:0057766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2110","termid":"PBO:0057766"}


id: GO:0005319
data:
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