# terms

id: PATO:0002278
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's participating in a joint with another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in contact with","termid":"PATO:0001961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"articulated with","termid":"PATO:0002278"}


id: PBO:0040134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 18","termid":"PBO:0040134"}


id: PBO:0047211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 221 member B","termid":"PBO:0047211"}


id: GO:0050912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of taste in which a gustatory chemical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception","termid":"GO:0050907"},{"relation_name":"part_of","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of taste","synonyms":[{"name":"perception of taste, detection of chemical stimulus","type":"exact"},{"name":"perception of taste, sensory detection of chemical stimulus","type":"exact"},{"name":"perception of taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of taste","type":"exact"},{"name":"sensory detection of taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of taste","type":"exact"},{"name":"sensory transduction of taste","type":"exact"},{"name":"taste perception","type":"broad"}],"termid":"GO:0050912"}


id: GO:0060825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands contributing to the anterior/posterior pattern of the neural plate.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060825"}


id: MONDO:0034103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic-uremic syndrome","termid":"MONDO:0001549"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"infection-related hemolytic uremic syndrome","secondary_identifiers":["GARD:22234","Orphanet:544482","MEDGEN:1826072","UMLS:C5680165"],"termid":"MONDO:0034103","xrefs":{"Monarch":{"xref_id":"0034103"}}}


id: PBO:0058353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4726","termid":"PBO:0058353"}


id: GO:1900886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tridecane biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tridecane biosynthetic process","termid":"GO:1900884"},{"relation_name":"is_a","term_name":"positive regulation of tridecane metabolic process","termid":"GO:1900895"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"positively_regulates","term_name":"tridecane biosynthetic process","termid":"GO:1900632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tridecane biosynthetic process","synonyms":[{"name":"activation of tridecane anabolism","type":"narrow"},{"name":"activation of tridecane biosynthesis","type":"narrow"},{"name":"activation of tridecane biosynthetic process","type":"narrow"},{"name":"activation of tridecane formation","type":"narrow"},{"name":"activation of tridecane synthesis","type":"narrow"},{"name":"positive regulation of tridecane anabolism","type":"exact"},{"name":"positive regulation of tridecane biosynthesis","type":"exact"},{"name":"positive regulation of tridecane formation","type":"exact"},{"name":"positive regulation of tridecane synthesis","type":"exact"},{"name":"up regulation of tridecane anabolism","type":"exact"},{"name":"up regulation of tridecane biosynthesis","type":"exact"},{"name":"up regulation of tridecane biosynthetic process","type":"exact"},{"name":"up regulation of tridecane formation","type":"exact"},{"name":"up regulation of tridecane synthesis","type":"exact"},{"name":"up-regulation of tridecane anabolism","type":"exact"},{"name":"up-regulation of tridecane biosynthesis","type":"exact"},{"name":"up-regulation of tridecane biosynthetic process","type":"exact"},{"name":"up-regulation of tridecane formation","type":"exact"},{"name":"up-regulation of tridecane synthesis","type":"exact"},{"name":"upregulation of tridecane anabolism","type":"exact"},{"name":"upregulation of tridecane biosynthesis","type":"exact"},{"name":"upregulation of tridecane biosynthetic process","type":"exact"},{"name":"upregulation of tridecane formation","type":"exact"},{"name":"upregulation of tridecane synthesis","type":"exact"}],"termid":"GO:1900886"}


id: FYPO:0007487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which insertion of the newly formed spindle pole body into the nuclear envelope does not occur during the second meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished new meiotic spindle pole body insertion into nuclear envelope during meiosis II","synonyms":[{"name":"abolished new meiotic SPB insertion into nuclear envelope during meiosis II","type":"exact"},{"name":"abolished new meiotic spindle pole body insertion into nuclear envelope during second meiotic nuclear division","type":"exact"},{"name":"abolished new spindle pole body insertion into nuclear envelope during meiosis II","type":"exact"}],"termid":"FYPO:0007487"}


id: GO:0009713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound biosynthetic process","synonyms":[{"name":"catechol anabolism","type":"related"},{"name":"catechol biosynthesis","type":"related"},{"name":"catechol biosynthetic process","type":"related"},{"name":"catechol formation","type":"related"},{"name":"catechol synthesis","type":"related"}],"termid":"GO:0009713"}


id: GO:0004617
data:
  {"annotated_genes":["SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64854],"is_not":false,"summary":null,"term":"GO:0004617"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphoglycerate + NAD+ = 3-phosphohydroxypyruvate + NADH + H+.","definition_xrefs":["EC:1.1.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phosphoglycerate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:PGLYCDEHYDROG-RXN","Reactome:R-HSA-977348","RHEA:12641"],"synonyms":[{"name":"3-phospho-D-glycerate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"3-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"3-phosphoglycerate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"3-phosphoglyceric acid dehydrogenase activity","type":"related"},{"name":"3PHP reductase activity","type":"related"},{"name":"D- and L-HGA","type":"related"},{"name":"D-3-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"D-3-phosphoglycerate:NAD+ oxidoreductase activity","type":"related"},{"name":"PGDH activity","type":"related"},{"name":"SerA","type":"related"},{"name":"SerA 3PG dehydrogenase activity","type":"related"},{"name":"alpha-KG reductase activity","type":"related"},{"name":"alpha-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"alphaKG reductase activity","type":"related"},{"name":"glycerate 3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerate-1,3-phosphate dehydrogenase activity","type":"related"},{"name":"phosphoglycerate oxidoreductase activity","type":"related"},{"name":"phosphoglyceric acid dehydrogenase activity","type":"related"}],"termid":"GO:0004617","terms_by_termid":{"GO:0004617":null}}


id: GO:0048402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the intermediate mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"intermediate mesoderm morphogenesis","termid":"GO:0048390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesoderm structural organization","synonyms":[{"name":"intermediate mesoderm structural organisation","type":"exact"}],"termid":"GO:0048402"}


id: GO:0033399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cis-zeatin, (2Z)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zeatin metabolic process","termid":"GO:0033397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cis-zeatin metabolic process","synonyms":[{"name":"cis-zeatin metabolism","type":"exact"}],"termid":"GO:0033399"}


id: PBO:0062450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 117 pseudogene","termid":"PBO:0062450"}


id: PBO:0073860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A8","termid":"PBO:0073860"}


id: PBO:0017653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication preinitiation complex assembly protein","termid":"PBO:0017653"}


id: MONDO:0017989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"His bundle tachycardia is a very rare congenital genetic tachyarrhythmia characterized by incessant tachycardia and high morbidity and mortality.","definition_xrefs":["Orphanet:3283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"His bundle tachycardia","secondary_identifiers":["MEDGEN:21066","MESH:D013613","icd11.foundation:962827983","UMLS:C0039235","NCIT:C111646","ICD9:427.89","GARD:2706","SCTID:233901002"],"synonyms":[{"name":"JET","type":"exact"},{"name":"junctional ectopic tachycardia","type":"exact"}],"termid":"MONDO:0017989","xrefs":{"Monarch":{"xref_id":"0017989"}}}


id: MONDO:0005448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver injury resulting from hepatitis C infection.","definition_xrefs":["EFO:0005129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cirrhosis of liver","termid":"MONDO:0005155"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatitis C induced liver cirrhosis","secondary_identifiers":["MEDGEN:1674707","UMLS:C4763867"],"termid":"MONDO:0005448","xrefs":{"Monarch":{"xref_id":"0005448"}}}


id: GO:0050637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + acetyl-CoA + 18 H+ + 8 malonyl-CoA + 11 NADPH = S-adenosyl-L-homocysteine + 8 CO2 + 9 CoA + dihydromonacolin L + 6 H2O + 11 NADP+.","definition_xrefs":["RHEA:18565","EC:2.3.1.161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"lovastatin nonaketide synthase activity","secondary_identifiers":["KEGG_REACTION:R07251","MetaCyc:2.3.1.161-RXN"],"synonyms":[{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing, thioester-hydrolysing)","type":"related"}],"termid":"GO:0050637"}


id: GO:0018663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dihydroxypyridine + H+ + NADH + O2 = 2,3,6-trihydroxypyridine + H2O + NAD+.","definition_xrefs":["EC:1.14.13.10","RHEA:16917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,6-dihydroxypyridine 3-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0479","KEGG_REACTION:R04130","MetaCyc:1.14.13.10-RXN"],"synonyms":[{"name":"2,6-dihydroxypyridine oxidase activity","type":"exact"},{"name":"2,6-dihydroxypyridine,NADH:oxygen oxidoreductase (3-hydroxylating)","type":"related"}],"termid":"GO:0018663"}


id: PBO:0067549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 698, pseudogene","termid":"PBO:0067549"}


id: PBO:0069449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 714, pseudogene","termid":"PBO:0069449"}


id: GO:0036302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the atrioventricular canal over time, from its formation to the mature structure. The atrioventricular canal is the part of the heart connecting the atrium to the cardiac ventricle.","definition_xrefs":["UBERON:0002087","ZFA:0001315","GOC:BHF","GOC:gr","PMID:14701881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular canal development","termid":"GO:0036302"}


id: PBO:0041841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 21","termid":"PBO:0041841"}


id: SO:1001284
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A set of units of gene expression directly regulated by a common set of one or more common regulatory gene products.","definition_xrefs":["ISBN:0198506732","PMID:32665585"],"direct_ancestors":[{"relation_name":"has_part","term_name":"unit_of_gene_expression","termid":"SO:0002300"},{"relation_name":"is_a","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulon","secondary_identifiers":["http://en.wikipedia.org/wiki/Regulon"],"termid":"SO:1001284"}


id: PBO:0075660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPTBN1 antisense RNA 1","termid":"PBO:0075660"}


id: GO:0050260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ATP + NH4 = 5-phospho-D-ribosylamine + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:13777","EC:6.3.4.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"ribose-5-phosphate-ammonia ligase activity","secondary_identifiers":["MetaCyc:RIBOSE-5-PHOSPHATE--AMMONIA-LIGASE-RXN","KEGG_REACTION:R01053"],"synonyms":[{"name":"5-phosphoribosylamine synthetase activity","type":"related"},{"name":"ammonia-ribose 5-phosphate aminotransferase activity","type":"related"},{"name":"ribose 5-phosphate aminotransferase activity","type":"related"},{"name":"ribose-5-phosphate:ammonia ligase (ADP-forming)","type":"related"}],"termid":"GO:0050260"}


id: GO:0030954
data:
  {"annotated_genes":["SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117270],"is_not":false,"summary":null,"term":"GO:0030954"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of an astral microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astral microtubule organization","termid":"GO:0030953"},{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0007010","GO:0007049","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"astral microtubule nucleation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030954","terms_by_termid":{"GO:0030954":null}}


id: PBO:0028242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vacuolated_spheroid_vegetative_cell","termid":"PBO:0028242"}


id: GO:1905042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelium regeneration.","definition_xrefs":["PMID:23221517","GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of epithelium regeneration","termid":"GO:1905041"},{"relation_name":"negatively_regulates","term_name":"epithelium regeneration","termid":"GO:1990399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelium regeneration","synonyms":[{"name":"down regulation of epithelium regeneration","type":"exact"},{"name":"down regulation of regeneration of epithelium","type":"exact"},{"name":"down-regulation of epithelium regeneration","type":"exact"},{"name":"down-regulation of regeneration of epithelium","type":"exact"},{"name":"downregulation of epithelium regeneration","type":"exact"},{"name":"downregulation of regeneration of epithelium","type":"exact"},{"name":"inhibition of epithelium regeneration","type":"narrow"},{"name":"inhibition of regeneration of epithelium","type":"narrow"},{"name":"negative regulation of regeneration of epithelium","type":"exact"}],"termid":"GO:1905042"}


id: PBO:0082314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for the F0 sector of mitochondrial F1F0 ATP synthase; mitochondrial inner membrane protein; interacts genetically with ATP6","termid":"PBO:0082314"}


id: PBO:0076823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 5B","termid":"PBO:0076823"}


id: MONDO:0100408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(16;21)(q24;q22). (A cytogenetic abnormality that refers to the translocation of the long arm (q24) of chromosome 16 and the long arm (q22) of chromosome 22. It is associated with RUNX1/CBFA2T3 fusions, myelodysplastic syndromes and acute myeloid leukemia.)","definition_xrefs":["NCIT:C168773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(16;21)(q24;q22)","synonyms":[{"name":"AML, t(16;21)(q24;q22)","type":"exact"}],"termid":"MONDO:0100408","xrefs":{"Monarch":{"xref_id":"0100408"}}}


id: PBO:0070907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 15","termid":"PBO:0070907"}


id: PBO:0086099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein related to mammalian high mobility group (HMG) proteins; nuclear protein; essential for function of H/ACA-type snoRNPs, which are involved in 18S rRNA processing","termid":"PBO:0086099"}


id: MONDO:1011476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis multiplex congenita that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita, non-human animal","termid":"MONDO:1011455"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita, sheep","secondary_identifiers":["OMIA:001465-9940"],"termid":"MONDO:1011476","xrefs":{"Monarch":{"xref_id":"1011476"}}}


id: MONDO:0008614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of tumorigenicity 3","secondary_identifiers":["OMIM:191181","MEDGEN:348673","UMLS:C1860658"],"synonyms":[{"name":"ST3","type":"exact"},{"name":"cervical carcinoma","type":"related"},{"name":"cervical carcinoma, tumor-suppressor Gene involved 1N","type":"related"},{"name":"suppressor of tumorigenicity 3","type":"exact"},{"name":"tumor-suppressor Gene, Hela cell type","type":"related"}],"termid":"MONDO:0008614","xrefs":{"Monarch":{"xref_id":"0008614"}}}


id: PBO:0028113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_G418","termid":"PBO:0028113"}


id: GO:1901270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipooligosaccharide.","definition_xrefs":["UniPathway:UPA00501","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide catabolic process","synonyms":[{"name":"lipooligosaccharide breakdown","type":"exact"},{"name":"lipooligosaccharide catabolism","type":"exact"},{"name":"lipooligosaccharide degradation","type":"exact"}],"termid":"GO:1901270"}


id: GO:0007571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A developmental process that arises as the cell progresses toward the end of its lifespan and cause changes cellular metabolism, resulting in a decline in cell function; for example, one aspect of general metabolic decline is a decrease in the efficiency of protein synthesis.","definition_xrefs":["GOC:jh","GOC:mah","PMID:9891807"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent general metabolic decline (obsolete GO:0007571)","synonyms":[{"name":"age-dependent decreased translational activity","type":"narrow"},{"name":"age-dependent increased protein content","type":"narrow"},{"name":"age-dependent yeast cell size increase","type":"related"},{"name":"nucleolar size increase","type":"narrow"}],"termid":"GO:0007571"}


id: MONDO:0012362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PLN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1P","secondary_identifiers":["OMIM:609909","DOID:0110439","GARD:15469","MEDGEN:322782","MESH:C563690","UMLS:C1835928"],"synonyms":[{"name":"CMD1P","type":"exact"},{"name":"PLN familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1P","type":"exact"},{"name":"cardiomyopathy, dilated, type 1P","type":"exact"},{"name":"dilated cardiomyopathy type 1P","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PLN","type":"exact"}],"termid":"MONDO:0012362","xrefs":{"Monarch":{"xref_id":"0012362"}}}


id: PBO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex phosphatidylinositol pseudokinase Tra1","termid":"PBO:0003810"}


id: MONDO:0016524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An alteration in limb growth caused by congenital vascular malformations in childhood.","definition_xrefs":["PMID:8305978"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital vascular bone syndrome (obsolete MONDO:0016524)","secondary_identifiers":["icd11.foundation:825559961","Orphanet:235832"],"termid":"MONDO:0016524","xrefs":{"Monarch":{"xref_id":"0016524"}}}


id: PBO:0076565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3F","termid":"PBO:0076565"}


id: FYPO:0005366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitosis","synonyms":[{"name":"abolished protein phosphorylation during M phase of mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during mitotic M phase","type":"related"},{"name":"protein phosphorylation abolished during mitosis","type":"exact"}],"termid":"FYPO:0005366"}


id: PBO:0054915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2329","termid":"PBO:0054915"}


id: GO:0070713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an guanosine-cytidine dinucleotide.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA guanosine-cytidine insertion","synonyms":[{"name":"RNA GC insertion","type":"exact"}],"termid":"GO:0070713"}


id: PBO:0043016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule L1 like","termid":"PBO:0043016"}


id: PBO:0070038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1335, pseudogene","termid":"PBO:0070038"}


id: GO:0050365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophanamide + H2O = L-tryptophan + NH4.","definition_xrefs":["RHEA:11012","EC:3.5.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"tryptophanamidase activity","secondary_identifiers":["KEGG_REACTION:R00682","MetaCyc:TRYPTOPHANAMIDASE-RXN"],"synonyms":[{"name":"L-tryptophan aminopeptidase","type":"broad"},{"name":"L-tryptophanamide amidohydrolase activity","type":"related"},{"name":"tryptophan aminopeptidase","type":"broad"}],"termid":"GO:0050365"}


id: PATO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000023 relative compatability (obsolete PATO:0000023)","termid":"PATO:0000023"}


id: PBO:0039076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 4","termid":"PBO:0039076"}


id: SO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of an SVA mobile element.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVA_deletion","synonyms":[{"name":"SVA deletion","type":"exact"}],"termid":"SO:0002068"}


id: MONDO:1012291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal hepatitis, non-human animal","termid":"MONDO:1011779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal hepatitis, dog","secondary_identifiers":["OMIA:001094-9615"],"termid":"MONDO:1012291","xrefs":{"Monarch":{"xref_id":"1012291"}}}


id: GO:0099582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any neurotransmitter receptor activity that is involved in regulating the concentration of calcium in the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neurotransmitter receptor activity involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"neurotransmitter receptor activity involved in regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099582"}


id: PBO:0048046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 4","termid":"PBO:0048046"}


id: MONDO:1010026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Budd-Chiari syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"liver disorder, non-human animal","termid":"MONDO:1012967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Budd-Chiari syndrome, non-human animal","secondary_identifiers":["OMIA:001203"],"termid":"MONDO:1010026","xrefs":{"Monarch":{"xref_id":"1010026"}}}


id: PBO:0083710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in a late step of GPI anchor assembly; involved in the addition of phosphoethanolamine to the multiply mannosylated glycosylphosphatidylinositol (GPI) intermediate; human PIG-Fp is a functional homolog","termid":"PBO:0083710"}


id: MONDO:0044200
data:
  {"annotated_genes":["SJAG_00677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014168"}]},"cv_name":"mondo","definition":"T-B+ severe combined immunodeficiency (SCID) is a group of rare monogenic primary immunodeficiency disorders characterized by a lack of functional peripheral T lymphocytes with presence of B lymphocytes, resulting in early-onset severe respiratory viral, bacterial or fungal infections, diarrhea and failure to thrive.","definition_xrefs":["Orphanet:317416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842847","UMLS:C5679894","GARD:21405"],"synonyms":[{"name":"T-B+ SCID","type":"exact"},{"name":"T-cell negative B-cell positive SCID","type":"exact"}],"termid":"MONDO:0044200","terms_by_termid":{"MONDO:0014168":null},"xrefs":{"Monarch":{"xref_id":"0044200"}}}


id: MONDO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A systemic mycosis that arises from infection in an immunologically normal host.","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mycosis","termid":"MONDO:0000256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary systemic mycosis","secondary_identifiers":["DOID:0050292"],"termid":"MONDO:0000308","xrefs":{"Monarch":{"xref_id":"0000308"}}}


id: PATO:0000973
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's disposition to admit the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porosity","termid":"PATO:0000973"}


id: GO:1901694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of compound eye retinal cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","PMID:12021768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"positive regulation of compound eye retinal cell programmed cell death","termid":"GO:0046672"},{"relation_name":"is_a","term_name":"regulation of compound eye retinal cell apoptotic process","termid":"GO:1901692"},{"relation_name":"positively_regulates","term_name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye retinal cell apoptotic process","secondary_identifiers":["GO:0046675"],"synonyms":[{"name":"activation of compound eye retinal cell apoptotic process","type":"narrow"},{"name":"induction of compound eye retinal cell programmed cell death","type":"related"},{"name":"up regulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"up-regulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"upregulation of compound eye retinal cell apoptotic process","type":"exact"}],"termid":"GO:1901694"}


id: MONDO:0020141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious disease with dementia (obsolete MONDO:0020141)","secondary_identifiers":["Orphanet:98542"],"termid":"MONDO:0020141","xrefs":{"Monarch":{"xref_id":"0020141"}}}


id: MONDO:0019847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital adrenal hypoplasia of maternal cause (obsolete MONDO:0019847)","secondary_identifiers":["Orphanet:95701"],"termid":"MONDO:0019847","xrefs":{"Monarch":{"xref_id":"0019847"}}}


id: SO:0001282
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylcytidine","secondary_identifiers":["RNAMOD:021"],"synonyms":[{"name":"5-methylcytidine","type":"exact"},{"name":"five methylcytidine","type":"exact"},{"name":"m5C","type":"exact"}],"termid":"SO:0001282"}


id: GO:0052633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-aconitate + H2O = isocitrate.","definition_xrefs":["EC:4.2.1.3","MetaCyc:ACONITATEHYDR-RXN","GOC:vw","GOC:pde"],"gene_count":0,"genotype_count":0,"name":"obsolete isocitrate hydro-lyase (cis-aconitate-forming) activity (obsolete GO:0052633)","synonyms":[{"name":"aconitate hydratase activity","type":"broad"},{"name":"cis-aconitase activity","type":"broad"},{"name":"citrate hydro-lyase activity","type":"broad"},{"name":"citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"broad"},{"name":"citrate(isocitrate) hydro-lyase activity","type":"broad"}],"termid":"GO:0052633"}


id: PBO:0088795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase Oct1","termid":"PBO:0088795"}


id: PBO:0071786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribophorin II","termid":"PBO:0071786"}


id: PBO:0111861
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain","termid":"PBO:0111861"}


id: PBO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine-diphosphatase Gda1","termid":"PBO:0001128"}


id: PBO:0042730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein I","termid":"PBO:0042730"}


id: PBO:0044058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin S","termid":"PBO:0044058"}


id: GO:0070658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new neuromast sensory hair cells to replace those lost or destroyed by injury.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell differentiation","termid":"GO:0048886"},{"relation_name":"is_a","term_name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"},{"relation_name":"part_of","term_name":"neuromast regeneration","termid":"GO:0070657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast hair cell differentiation involved in neuromast regeneration","termid":"GO:0070658"}


id: PBO:0083855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Expressed copy (at MATa) of a1; homeobox-domain protein that, along with alpha2, represses transcription of haploid-specific genes in diploid cells; MATa1 pre-mRNA splicing requires Bud13p and Ist3p; a1 sequence is not present in SGD because the sequenced S288C strain is MATalpha, not MATa","termid":"PBO:0083855"}


id: MONDO:0044655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"}],"gene_count":0,"genotype_count":0,"name":"obsolete c12orf65-related combined oxidative phosphorylation defect (obsolete MONDO:0044655)","secondary_identifiers":["Orphanet:497623"],"synonyms":[{"name":"C12ORF65-related COXPD","type":"exact"}],"termid":"MONDO:0044655","xrefs":{"Monarch":{"xref_id":"0044655"}}}


id: MONDO:0957984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 2j","secondary_identifiers":["OMIM:620635","MEDGEN:1846005","UMLS:C5882725"],"termid":"MONDO:0957984","xrefs":{"Monarch":{"xref_id":"0957984"}}}


id: GO:0042301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphate ion.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphate ion binding","termid":"GO:0042301"}


id: FYPO:0001742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which isochromosome formation occurs more frequently than in wild type cells. In isochromosome formation, one chromosome arm is lost and the other arm is duplicated in its place.","definition_xrefs":["PMID:18923422","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gross chromosomal rearrangement","termid":"FYPO:0001740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased isochromosome formation","synonyms":[{"name":"increased occurrence of isochromosome formation","type":"exact"}],"termid":"FYPO:0001742"}


id: PBO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated WD repeat protein Atg18a","termid":"PBO:0036312"}


id: PBO:0057231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 410","termid":"PBO:0057231"}


id: PBO:0012252
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of SIP Complex","termid":"PBO:0012252"}


id: PBO:0049963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 9","termid":"PBO:0049963"}


id: PBO:0113463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of  tail-anchored proteins proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for meiotic nuclear division; Get1p and Get2p form an aqueous channel for protein translocation and insertion into the membrane","termid":"PBO:0113463"}


id: PBO:0111742
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLEYA domain","termid":"PBO:0111742"}


id: MONDO:0010096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tardive dyskinesia","secondary_identifiers":["SCTID:102449007","UMLS:C0686347","MESH:D000071057","MEDGEN:151939","HP:0040141","OMIM:272620"],"synonyms":[{"name":"tardive dyskinesia","type":"exact"},{"name":"tardive dyskinesia (disease)","type":"exact"}],"termid":"MONDO:0010096","xrefs":{"Monarch":{"xref_id":"0010096"}}}


id: PBO:0056653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 20","termid":"PBO:0056653"}


id: MONDO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple mitochondrial dysfunctions syndrome (obsolete MONDO:0000143)","termid":"MONDO:0000143","xrefs":{"Monarch":{"xref_id":"0000143"}}}


id: FYPO:0003734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alcohol dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal alcohol dehydrogenase activity","termid":"FYPO:0003733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased alcohol dehydrogenase activity","synonyms":[{"name":"decreased alcohol dehydrogenase (NAD) activity","type":"exact"},{"name":"reduced alcohol dehydrogenase activity","type":"exact"}],"termid":"FYPO:0003734"}


id: GO:0070107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070107"}


id: PBO:0039542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 39","termid":"PBO:0039542"}


id: PBO:0002998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHE domain cation binding protein (predicted)","termid":"PBO:0002998"}


id: PBO:0091686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP2/UBAP2L","termid":"PBO:0091686"}


id: MONDO:0020704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, neuromuscular disorder characterized by muscle hyperirritability triggered by stretch, percussion or movement. Patients present wave-like, electrically-silent muscle contractions (rippling), muscle mounding, painful muscle stiffness and muscle hypertrophy, usually with elevated serum creatine kinase.","definition_xrefs":["Orphanet:97238"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"caveolinopathy","termid":"MONDO:0016146"},{"relation_name":"is_a","term_name":"rippling muscle disease","termid":"MONDO:0011634"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"inherited rippling muscle disease","secondary_identifiers":["MedDRA:10069417"],"synonyms":[{"name":"RMD","type":"broad"},{"name":"rippling muscle disease","type":"broad"}],"termid":"MONDO:0020704","xrefs":{"Monarch":{"xref_id":"0020704"}}}


id: PBO:0066889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 189","termid":"PBO:0066889"}


id: PBO:0045764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase, short chain 1","termid":"PBO:0045764"}


id: MONDO:0003023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the aorta.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic malignant tumor","termid":"MONDO:0004539"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"aorta angiosarcoma","secondary_identifiers":["UMLS:C1332312","NCIT:C5376","DOID:4510","MEDGEN:231071"],"synonyms":[{"name":"angiosarcoma (disease) of aorta","type":"exact"},{"name":"angiosarcoma of aorta","type":"exact"},{"name":"angiosarcoma of the aorta","type":"exact"},{"name":"aorta angiosarcoma (disease)","type":"exact"},{"name":"aortic angiosarcoma","type":"exact"},{"name":"aortic hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma of aorta","type":"exact"},{"name":"hemangiosarcoma of the aorta","type":"exact"}],"termid":"MONDO:0003023","xrefs":{"Monarch":{"xref_id":"0003023"}}}


id: GO:1903291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATP catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:BHF","PMID:10636900","GOC:TermGenie","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ATP catabolic process (obsolete GO:1903291)","synonyms":[{"name":"activation of ATP breakdown","type":"narrow"},{"name":"activation of ATP catabolic process","type":"narrow"},{"name":"activation of ATP catabolism","type":"narrow"},{"name":"activation of ATP degradation","type":"narrow"},{"name":"activation of ATP hydrolysis","type":"narrow"},{"name":"positive regulation of ATP breakdown","type":"exact"},{"name":"positive regulation of ATP catabolism","type":"exact"},{"name":"positive regulation of ATP degradation","type":"exact"},{"name":"positive regulation of ATP hydrolysis","type":"narrow"},{"name":"up regulation of ATP breakdown","type":"exact"},{"name":"up regulation of ATP catabolic process","type":"exact"},{"name":"up regulation of ATP catabolism","type":"exact"},{"name":"up regulation of ATP degradation","type":"exact"},{"name":"up regulation of ATP hydrolysis","type":"narrow"},{"name":"up-regulation of ATP breakdown","type":"exact"},{"name":"up-regulation of ATP catabolic process","type":"exact"},{"name":"up-regulation of ATP catabolism","type":"exact"},{"name":"up-regulation of ATP degradation","type":"exact"},{"name":"up-regulation of ATP hydrolysis","type":"narrow"},{"name":"upregulation of ATP breakdown","type":"exact"},{"name":"upregulation of ATP catabolic process","type":"exact"},{"name":"upregulation of ATP catabolism","type":"exact"},{"name":"upregulation of ATP degradation","type":"exact"},{"name":"upregulation of ATP hydrolysis","type":"narrow"}],"termid":"GO:1903291"}


id: PBO:0083471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PRY2","termid":"PBO:0083471"}


id: GO:0061974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of initial connective tissue surrounding cartilage into bone.","definition_xrefs":["PMID:21901110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endochondral bone morphogenesis","termid":"GO:0060350"},{"relation_name":"is_a","term_name":"membrane bone morphogenesis","termid":"GO:0061973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perichondral bone morphogenesis","termid":"GO:0061974"}


id: PBO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein","termid":"PBO:0000146"}


id: PBO:0075064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-27","termid":"PBO:0075064"}


id: MONDO:0024626
data:
  {"annotated_genes":["SJAG_01351","SJAG_04743","SJAG_00739"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[86537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[86390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"},{"annotations":[87038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic cell dysfunction","termid":"MONDO:0024627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00739":null,"SJAG_01351":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"defective phagocytic cell engulfment","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0398742","SCTID:234585008","MEDGEN:585050"],"synonyms":[{"name":"defective phagocytic cell killing","type":"exact"}],"termid":"MONDO:0024626","terms_by_termid":{"MONDO:0009284":null,"MONDO:0009947":null,"MONDO:0010600":null,"MONDO:0044208":null},"xrefs":{"Monarch":{"xref_id":"0024626"}}}


id: PBO:0017426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_integral_part","termid":"PBO:0017426"}


id: PBO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Aut12 (predicted)","termid":"PBO:0000504"}


id: GO:0033058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another along an axis.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"directional locomotion","termid":"GO:0033058"}


id: GO:0000905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a spore-bearing structure by fungus where spores will arise from asexual reproduction.","definition_xrefs":["GOC:clt","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocarp development","termid":"GO:0030584"},{"relation_name":"part_of","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocarp development involved in asexual reproduction","synonyms":[{"name":"conidium development","type":"narrow"},{"name":"fruiting body formation involved in asexual reproduction","type":"broad"},{"name":"haploid fruiting","type":"related"},{"name":"homokaryotic fruiting","type":"related"},{"name":"imperfect stage fruiting body development","type":"narrow"},{"name":"monokaryotic fruiting","type":"related"}],"termid":"GO:0000905"}


id: GO:0060315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051280"},{"relation_name":"is_a","term_name":"regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060314"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060315"}


id: PBO:0052745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 37","termid":"PBO:0052745"}


id: PBO:0031099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_M_phase","termid":"PBO:0031099"}


id: PBO:0030224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_morphology_during_vegetative_growth","termid":"PBO:0030224"}


id: PBO:0074963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-5","termid":"PBO:0074963"}


id: GO:0002603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002582"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002601"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"}],"termid":"GO:0002603"}


id: MONDO:0014247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, autosomal dominant disorder caused by mutation in the SCN11A gene. It is characterized by intense episodic pain mainly affecting the distal lower extremities in early childhood. The pain diminishes with age.","definition_xrefs":["NCIT:C125390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"familial episodic pain syndrome","termid":"MONDO:0018319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"familial episodic pain syndrome with predominantly lower limb involvement","secondary_identifiers":["OMIM:615552","MEDGEN:816229","UMLS:C3809899","GARD:17619","Orphanet:391392","DOID:0111731"],"synonyms":[{"name":"FEPS3","type":"related"},{"name":"episodic pain syndrome, familial, 3","type":"related"},{"name":"episodic pain syndrome, familial, type 3","type":"exact"}],"termid":"MONDO:0014247","xrefs":{"Monarch":{"xref_id":"0014247"}}}


id: PBO:0070682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 53","termid":"PBO:0070682"}


id: PATO:0000875
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000875 irritable (obsolete PATO:0000875)","termid":"PATO:0000875"}


id: PBO:0040935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 6","termid":"PBO:0040935"}


id: PR:P46595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P46595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.02","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc4","type":"exact"},{"name":"ubiquitin carrier protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P46595"}


id: PBO:0108677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colon, intestine and stomach enriched 1","termid":"PBO:0108677"}


id: GO:0004171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: [eIF5A-precursor]-lysine + spermidine = [eIF5A-precursor]-deoxyhypusine + propane-1,3-diamine.","definition_xrefs":["EC:2.5.1.46"],"gene_count":0,"genotype_count":0,"name":"obsolete deoxyhypusine synthase activity (obsolete GO:0004171)","synonyms":[{"name":"[eIF-5A]-deoxyhypusine synthase","type":"related"},{"name":"deoxyhypusine synthase activity","type":"exact"}],"termid":"GO:0004171"}


id: PBO:0033799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_subtelomeric_heterochromatin","termid":"PBO:0033799"}


id: GO:0032369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of lipid localization","termid":"GO:1905953"},{"relation_name":"negatively_regulates","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid transport","synonyms":[{"name":"down regulation of lipid transport","type":"exact"},{"name":"down-regulation of lipid transport","type":"exact"},{"name":"downregulation of lipid transport","type":"exact"},{"name":"inhibition of lipid transport","type":"narrow"}],"termid":"GO:0032369"}


id: GO:2000524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T cell costimulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of T cell costimulation","termid":"GO:2000523"},{"relation_name":"negatively_regulates","term_name":"T cell costimulation","termid":"GO:0031295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T cell costimulation","synonyms":[{"name":"negative regulation of T cell co-stimulation","type":"exact"},{"name":"negative regulation of T lymphocyte costimulation","type":"exact"},{"name":"negative regulation of T-cell co-stimulation","type":"exact"},{"name":"negative regulation of T-cell costimulation","type":"exact"},{"name":"negative regulation of T-lymphocyte costimulation","type":"exact"}],"termid":"GO:2000524"}


id: PBO:0064423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 1","termid":"PBO:0064423"}


id: PBO:0066917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 219","termid":"PBO:0066917"}


id: PBO:0003721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp11","termid":"PBO:0003721"}


id: PATO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractility quality inhering in a bearer by virtue of the bearer's inability of contracting or being contracted.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractility","termid":"PATO:0001579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-contractile","termid":"PATO:0001691"}


id: PR:000050546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr2 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PMID:27227887","PPRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe)","termid":"PR:000050544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr2/GTP+","pombase_gene_id":"SPCC777.05","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein gtr2, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gtr2/GTP+","type":"exact"},{"name":"gtr2/GTP+","type":"exact"},{"name":"Gtr2/GTP+","type":"exact"}],"termid":"PR:000050546"}


id: CHEBI:38338
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopyrimidine","termid":"CHEBI:38338"}


id: PBO:0048482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 4","termid":"PBO:0048482"}


id: MONDO:0012354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"P2Y12 defect is a rare hemorrhagic disorder characterized by mild to moderate bleeding diathesis with easy bruising, mucosal bleedings, and excessive post-operative hemorrhage due to defect of the platelet P2Y12 receptor resulting in selective impairment of platelet responses to adenosine diphosphate.","definition_xrefs":["Orphanet:36355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 8","secondary_identifiers":["OMIM:609821","NANDO:2200669","MEDGEN:344008","GARD:12478","UMLS:C1853278","MESH:C565220","DOID:0060692","SCTID:725291001"],"synonyms":[{"name":"ADP platelet receptor P2Y12 defect","type":"exact"},{"name":"BDPLT8","type":"related"},{"name":"P2Y12 defect","type":"exact"},{"name":"bleeding disorder due to P2Rx1 defect, somatic","type":"related"},{"name":"bleeding disorder due to P2Ry12 defect","type":"related"},{"name":"bleeding disorder, platelet-type 8","type":"related"},{"name":"bleeding disorder, platelet-type, 8","type":"related"},{"name":"platelet-type bleeding disorder 8","type":"exact"}],"termid":"MONDO:0012354","xrefs":{"Monarch":{"xref_id":"0012354"}}}


id: GO:0010929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of auxin mediated signaling pathway. Auxin mediated signaling pathway is the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of auxin mediated signaling pathway","termid":"GO:0010928"},{"relation_name":"positively_regulates","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of auxin mediated signaling pathway","synonyms":[{"name":"positive regulation of auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0010929"}


id: GO:0050251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinol = 11-cis-retinol.","definition_xrefs":["RHEA:19141","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"retinol isomerase activity","secondary_identifiers":["KEGG_REACTION:R02369","Reactome:R-HSA-2465926"],"synonyms":[{"name":"all-trans-retinol 11-cis-trans-isomerase activity","type":"exact"},{"name":"all-trans-retinol isomerase activity","type":"exact"}],"termid":"GO:0050251"}


id: GO:0047231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + UDP-D-glucose = 5'-O-beta-D-glucosylpyridoxine + H+ + UDP.","definition_xrefs":["EC:2.4.1.160","RHEA:20177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"pyridoxine 5'-O-beta-D-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01912","MetaCyc:2.4.1.160-RXN"],"synonyms":[{"name":"UDP-glucose-pyridoxine glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:pyridoxine 5'-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:pyridoxine 5'-O-beta-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:pyridoxine 5'-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-pyridoxine 5'-beta-glucosyltransferase activity","type":"related"}],"termid":"GO:0047231"}


id: PBO:0050941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 12, pseudogene","termid":"PBO:0050941"}


id: GO:0030937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XVII) chains; type XVII collagen triple helices span the plasma membrane and associate with hemidesmosomes and the basal lamina where they bind laminin.","definition_xrefs":["ISBN:0721639976","PMID:19693541","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane collagen trimer","termid":"GO:0030936"},{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"is_a","term_name":"hemidesmosome associated protein complex","termid":"GO:0098733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"collagen type XVII trimer","termid":"GO:0030937"}


id: PATO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process inhering in a biological process by virtue of the process unfolding in a location without oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity of a process to oxygen","termid":"PATO:0001458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic (for occurrence)","termid":"PATO:0001460"}


id: PBO:0113424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Saccharopine dehydrogenase (NAD+, L-lysine-forming); catalyzes the conversion of saccharopine to L-lysine, which is the final step in the lysine biosynthesis pathway; contains mRNA binding activity; required for targeting of Pls1p to the peroxisomal matrix in the absence of lysine","termid":"PBO:0113424"}


id: MONDO:0008248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pigmented purpuric eruption","secondary_identifiers":["SCTID:20343006","MESH:C537186","OMIM:172900","MEDGEN:96058","UMLS:C0406515"],"synonyms":[{"name":"Schamberg disease","type":"related"},{"name":"Schamberg purpura","type":"related"},{"name":"familial pigmented purpuric eruption","type":"related"},{"name":"pigmented purpura","type":"related"},{"name":"pigmented purpuric dermatosis","type":"related"},{"name":"pigmented purpuric eruption","type":"exact"},{"name":"progressive pigmented purpura","type":"related"}],"termid":"MONDO:0008248","xrefs":{"Monarch":{"xref_id":"0008248"}}}


id: GO:0016137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoside metabolic process","secondary_identifiers":["GO:0016140"],"synonyms":[{"name":"O-glycoside metabolic process","type":"exact"},{"name":"O-glycoside metabolism","type":"exact"},{"name":"glycoside metabolism","type":"exact"}],"termid":"GO:0016137"}


id: PBO:0084256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol phosphatase involved in inositol pyrophosphate metabolism; hydrolyzes the beta-phosphate from the 5-diphosphate group of PP-InsPs including: 5PP-IP5 (IP7), 1,5PP-IP4 (IP8) and 5-PP-InsP4; functions as an anti-prion (anti-[PSI]) component; member of the atypical dual-specificity subgroup of the protein tyrosine-phosphatase (PTP) superfamily; localizes to the cytoplasm","termid":"PBO:0084256"}


id: GO:0043197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, membranous protrusion from a dendrite that forms a postsynaptic compartment, typically receiving input from a single presynapse. They function as partially isolated biochemical and an electrical compartments. Spine morphology is variable:they can be thin, stubby, mushroom, or branched, with a continuum of intermediate morphologies. They typically terminate in a bulb shape, linked to the dendritic shaft by a restriction. Spine remodeling is though to be involved in synaptic plasticity.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"},{"relation_name":"is_a","term_name":"postsynapse","termid":"GO:0098794"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine","secondary_identifiers":["NIF_Subcellular:sao1799103720","Wikipedia:Dendritic_spine"],"synonyms":[{"name":"branched dendritic spine","type":"narrow"},{"name":"dendrite spine","type":"exact"},{"name":"mushroom dendritic spine","type":"narrow"},{"name":"sessile dendritic spine","type":"narrow"},{"name":"stubby dendritic spine","type":"narrow"},{"name":"thin dendritic spine","type":"narrow"}],"termid":"GO:0043197"}


id: PBO:0079598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2E2 divergent transcript","termid":"PBO:0079598"}


id: PBO:0018165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase, tRNA N6-threonyl-carbamoyl-adenosine (t6A), a modification protein Pgp1","termid":"PBO:0018165"}


id: PBO:0013021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP subunit Sap114","termid":"PBO:0013021"}


id: PBO:0028403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquinone_binding","termid":"PBO:0028403"}


id: PBO:0048151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE and coiled-coil domain autophagy adaptor 1","termid":"PBO:0048151"}


id: PBO:0027607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_anaphase","termid":"PBO:0027607"}


id: MONDO:0002474
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85991,85992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009824"}]},"cv_name":"mondo","definition":"A hereditary disorder characterized by excessive oxalate production, leading to hyperoxaluria.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"excluded_subClassOf","term_name":"disorder of glyoxylate metabolism","termid":"MONDO:0017703"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"primary hyperoxaluria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:271.8","MedDRA:10020703","Orphanet:416","DOID:2977","GARD:16530","MEDGEN:5697","NCIT:C123158","MESH:D006960","OMIMPS:259900","NANDO:2200503","NORD:1608","SCTID:17901006","UMLS:C0020501"],"synonyms":[{"name":"hyperoxaluria, primary","type":"exact"},{"name":"primary hyperoxaluria","type":"exact"}],"termid":"MONDO:0002474","terms_by_termid":{"MONDO:0009824":null},"xrefs":{"Monarch":{"xref_id":"0002474"}}}


id: MONDO:0011376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal familial ventricular fibrillation","termid":"MONDO:0100234"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"ventricular fibrillation, paroxysmal familial, type 1","secondary_identifiers":["UMLS:C2751898","MESH:C567851","OMIM:603829","SCTID:233915000","MEDGEN:414502"],"synonyms":[{"name":"IVF","type":"related"},{"name":"VF1","type":"exact"},{"name":"ventricular fibrillation during myocardial infarction, susceptibility to","type":"related"},{"name":"ventricular fibrillation, familial, 1","type":"exact"},{"name":"ventricular fibrillation, paroxysmal familial, 1","type":"exact"},{"name":"ventricular fibrillation, paroxysmal familial, type 1","type":"exact"}],"termid":"MONDO:0011376","xrefs":{"Monarch":{"xref_id":"0011376"}}}


id: PBO:0049043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 34","termid":"PBO:0049043"}


id: PR:P79063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic peptide chain release factor subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01942","PANTHER:PTHR10113:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic peptide chain release factor subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.01","secondary_identifiers":["UniProtKB:P79063"],"synonyms":[{"name":"Spom972h-ETF1","type":"exact"},{"name":"eRF1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic release factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79063"}


id: MOD:01406
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-threonine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:11320328","RESID:AA0483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-threonine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S,2R)-1-amino-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01406"}


id: PBO:0091693
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human TXNL1","termid":"PBO:0091693"}


id: GO:1990748
data:
  {"annotated_genes":["SJAG_02599","SJAG_04403","SJAG_04404","SJAG_02247","SJAG_02106","SJAG_06611","SJAG_00179","SJAG_04632","SJAG_01216","SJAG_01344","SJAG_01457","SJAG_03797","SJAG_00903","SJAG_04063","SJAG_01351","SJAG_03303","SJAG_05256","SJAG_03623","SJAG_02973","SJAG_03166","SJAG_01612","SJAG_04399","SJAG_02960","SJAG_03653","SJAG_04823","SJAG_00419","SJAG_00489","SJAG_04953","SJAG_03476","SJAG_03108","SJAG_01404","SJAG_02276","SJAG_03316","SJAG_04608","SJAG_04125","SJAG_01596","SJAG_01162","SJAG_00668","SJAG_00614","SJAG_03497","SJAG_05181","SJAG_00365","SJAG_01734","SJAG_04242","SJAG_01199","SJAG_02988","SJAG_03494","SJAG_01628","SJAG_02010","SJAG_00988","SJAG_02515","SJAG_01973","SJAG_01651","SJAG_00270","SJAG_02630","SJAG_01995","SJAG_00141","SJAG_04516","SJAG_03288","SJAG_02907","SJAG_04726","SJAG_00219","SJAG_04674","SJAG_04788"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88292,88297,88394,90438,92767,93452,93453,95006,95280,97424,98688,99336,99523,100168,100646,103111,103184,103939,109040,112619,113341,113793,113831,114931,115032,118510,118932,119073],"is_not":false,"summary":null,"term":"GO:1990748"},{"annotations":[113063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110095"},{"annotations":[118535,71172,97335,93633,97373,108753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098849"},{"annotations":[114072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140114"},{"annotations":[100323,95520,109159,117697,118621,105370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[105373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140041"},{"annotations":[102537,87721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070458"},{"annotations":[68468,69048,65603,107121,63723,57588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098869"},{"annotations":[95857,78479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"},{"annotations":[65292,74649,69217,61023,89304,89725,58080,93463,99595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"},{"annotations":[106931,95888,100327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110052"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of a toxic substance. These may include transport of the toxic substance away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"},{"relation_name":"part_of","term_name":"cellular response to toxic substance","termid":"GO:0097237"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00179":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00668":null,"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01457":null,"SJAG_01596":null,"SJAG_01612":null,"SJAG_01628":null,"SJAG_01651":null,"SJAG_01734":null,"SJAG_01973":null,"SJAG_01995":null,"SJAG_02010":null,"SJAG_02106":null,"SJAG_02247":null,"SJAG_02276":null,"SJAG_02515":null,"SJAG_02599":null,"SJAG_02630":null,"SJAG_02907":null,"SJAG_02960":null,"SJAG_02973":null,"SJAG_02988":null,"SJAG_03108":null,"SJAG_03166":null,"SJAG_03288":null,"SJAG_03303":null,"SJAG_03316":null,"SJAG_03476":null,"SJAG_03494":null,"SJAG_03497":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_03797":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04242":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04404":null,"SJAG_04516":null,"SJAG_04608":null,"SJAG_04632":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1990748","terms_by_termid":{"GO:0019430":null,"GO:0046294":null,"GO:0061692":null,"GO:0070458":null,"GO:0098849":null,"GO:0098869":null,"GO:0110052":null,"GO:0110095":null,"GO:0140041":null,"GO:0140114":null,"GO:1990748":null}}


id: PATO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A displaced angular placement quality inhering in a body part by virtue of the bearer's movement away from the medial plane of the body.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced to","termid":"PATO:0002168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abduction","termid":"PATO:0002131"}


id: MONDO:0006738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cutaneous tumor of eccrine sweat gland origin. It is most commonly found on the extremities and is usually benign. There is no indication that heredity or external agents cause these tumors.","definition_xrefs":["MESH:D018250"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eccrine sweat gland cancer","termid":"MONDO:0005506"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"eccrine acrospiroma","secondary_identifiers":["EFO:1000912","ONCOTREE:PORO","SCTID:253020008","MEDGEN:104915","NCIT:C27273","SCTID:400099008","NCIT:C7568","UMLS:C0206671","DOID:5442"],"synonyms":[{"name":"Hidradenomas","type":"related"},{"name":"Hidradenomas, solid-cystic","type":"related"},{"name":"Hidradrenoma, clear-cell","type":"related"},{"name":"Hidradrenoma, nodular","type":"related"},{"name":"Hidradrenomas, clear-cell","type":"related"},{"name":"Hidradrenomas, nodular","type":"related"},{"name":"acrospiroma, eccrine","type":"related"},{"name":"acrospiromas","type":"related"},{"name":"acrospiromas, eccrine","type":"related"},{"name":"clear cell Hidradrenoma","type":"related"},{"name":"clear-cell Hidradrenoma","type":"related"},{"name":"clear-cell Hidradrenomas","type":"related"},{"name":"eccrine Acrospiromas","type":"related"},{"name":"eccrine acrospiroma","type":"exact"},{"name":"eccrine hidradenoma","type":"exact"},{"name":"eccrine hidradenoma of skin","type":"exact"},{"name":"eccrine poroma","type":"exact"},{"name":"hidradenoma","type":"related"},{"name":"hidradenoma, solid-cystic","type":"related"},{"name":"nodular Hidradrenoma","type":"related"},{"name":"nodular Hidradrenomas","type":"related"},{"name":"poroma","type":"exact"},{"name":"poroma (acrospiroma)","type":"exact"},{"name":"poroma/acrospiroma","type":"related"},{"name":"solid cystic hidradenoma","type":"related"},{"name":"solid-cystic Hidradenomas","type":"related"},{"name":"solid-cystic hidradenoma","type":"related"}],"termid":"MONDO:0006738","xrefs":{"Monarch":{"xref_id":"0006738"}}}


id: PBO:0048130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 10","termid":"PBO:0048130"}


id: MONDO:0017720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of recessively inherited diseases characterized by the intralysosomal accumulation of G(M2) GANGLIOSIDE in the neuronal cells. Subtypes include mutations of enzymes in the BETA-N-ACETYLHEXOSAMINIDASES system or G(M2) ACTIVATOR PROTEIN leading to disruption of normal degradation of GANGLIOSIDES, a subclass of ACIDIC GLYCOSPHINGOLIPIDS.","definition_xrefs":["Orphanet:309152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis","termid":"MONDO:0017719"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0002561","MONDO:0002525"],"is_obsolete":false,"name":"GM2 gangliosidosis","secondary_identifiers":["GARD:21323","NANDO:2200559","ICD10CM:E75.0","NANDO:1200070","MEDGEN:78656","DOID:3321","SCTID:33316007","UMLS:C0268274","icd11.foundation:1513691830","MESH:D020143"],"synonyms":[{"name":"GM2-gangliosidosis, B, B1, AB variant","type":"related"},{"name":"GM>2< gangliosidosis","type":"exact"},{"name":"gangliosidosis GM2","type":"exact"}],"termid":"MONDO:0017720","xrefs":{"Monarch":{"xref_id":"0017720"}}}


id: PBO:0048471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell nuclear acidic peptidase","termid":"PBO:0048471"}


id: GO:0016914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A gonadotrophic glycoprotein hormone secreted, in mammals, by the anterior pituitary gland; consists of alpha and beta subunits, the latter of which confers hormonal specificity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gonadotropin complex","termid":"GO:0061696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"follicle-stimulating hormone complex","synonyms":[{"name":"FSH complex","type":"exact"},{"name":"follicle stimulating hormone complex","type":"exact"}],"termid":"GO:0016914"}


id: PATO:0001012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001012 relative intensity value (obsolete PATO:0001012)","termid":"PATO:0001012"}


id: GO:0110066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mitotic telomere clustering during interphase.","definition_xrefs":["GOC:vw","PMID:25778919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of interphase mitotic telomere clustering","termid":"GO:0110065"},{"relation_name":"negatively_regulates","term_name":"interphase mitotic telomere clustering","termid":"GO:0120110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of interphase mitotic telomere clustering","synonyms":[{"name":"negative regulation of mitotic telomere clustering during interphase","type":"exact"},{"name":"telomere dispersion during interphase","type":"exact"}],"termid":"GO:0110066"}


id: PBO:0048086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 7","termid":"PBO:0048086"}


id: PBO:0058957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 1","termid":"PBO:0058957"}


id: PR:Q8WZK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8WZK1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp21, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.09c","synonyms":[{"name":"Spom972h-mrp21","type":"exact"}],"termid":"PR:Q8WZK1"}


id: MONDO:0016509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcornea-posterior megalolenticonus-persistent fetal vasculature-coloboma syndrome","secondary_identifiers":["GARD:10938","UMLS:C4751163","Orphanet:231736","MEDGEN:1667341"],"synonyms":[{"name":"MPPC syndrome","type":"exact"},{"name":"microcornea posterior megalolenticonus persistent fetal vasculature coloboma","type":"related"},{"name":"microcornea posterior megalolenticonus persistent foetal vasculature coloboma","type":"related"}],"termid":"MONDO:0016509","xrefs":{"Monarch":{"xref_id":"0016509"}}}


id: GO:0007245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (mating sensu Saccharomyces) (obsolete GO:0007245)","synonyms":[{"name":"activation of MAPKKK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007245"}


id: MONDO:0003926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma that involves the pleura.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nerve schwannoma","termid":"MONDO:0004820"},{"relation_name":"is_a","term_name":"pleural neoplasm","termid":"MONDO:0021065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurilemmoma of the pleura","secondary_identifiers":["UMLS:C1335435","DOID:6564","NCIT:C5418","MEDGEN:233863"],"synonyms":[{"name":"neurilemmoma of pleura","type":"exact"},{"name":"pleura schwannoma","type":"exact"},{"name":"pleural neurilemmoma","type":"exact"},{"name":"pleural schwannoma","type":"exact"},{"name":"schwannoma of pleura","type":"exact"},{"name":"schwannoma of the pleura","type":"exact"}],"termid":"MONDO:0003926","xrefs":{"Monarch":{"xref_id":"0003926"}}}


id: FYPO:0004558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, has an abnormal morphology, and in which actin cortical patch localization is abnormal.","definition_xrefs":["PMID:9765059","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"},{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0005447","FYPO:0001320","FYPO:0004803","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","synonyms":[{"name":"inviable after spore germination, undivided cell, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal F-actin patch localization","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localisation","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin patch localization","type":"exact"},{"name":"inviable following spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"inviable germinated spore, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"lethal after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"}],"termid":"FYPO:0004558"}


id: PBO:0072749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A10","termid":"PBO:0072749"}


id: GO:0085023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type VII secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type VII secretion system (obsolete GO:0085023)","termid":"GO:0085023"}


id: PR:O42947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16H5.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.12c","synonyms":[{"name":"Spom972h-SPBC16H5.12c","type":"exact"}],"termid":"PR:O42947"}


id: PBO:0074179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 2","termid":"PBO:0074179"}


id: PBO:0044386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 13","termid":"PBO:0044386"}


id: GO:0004919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-9 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-9 receptor activity","synonyms":[{"name":"IL-9 receptor activity","type":"exact"},{"name":"IL-9R","type":"exact"}],"termid":"GO:0004919"}


id: MONDO:0019097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hemorrhagic disorder due to a platelet anomaly which occurs from birth.","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to a constitutional platelet anomaly (obsolete MONDO:0019097)","secondary_identifiers":["Orphanet:71202"],"synonyms":[{"name":"rare bleeding disorder due to a constitutional platelet anomaly","type":"exact"},{"name":"rare bleeding disorder due to a constitutional thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare coagulopathy due to a constitutional platelet anomaly","type":"exact"},{"name":"rare coagulopathy due to a constitutional thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare hemorrhagic disorder due to a constitutional platelet anomaly","type":"exact"},{"name":"rare hemorrhagic disorder due to a constitutional thrombopathy and/or thrombocytopenia","type":"exact"}],"termid":"MONDO:0019097","xrefs":{"Monarch":{"xref_id":"0019097"}}}


id: PBO:0000586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-F0 ATPase assembly protein (predicted)","termid":"PBO:0000586"}


id: GO:1902695
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of metallochaperone activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","PMID:10426947","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"metallochaperone complex","termid":"GO:1902695"}


id: FYPO:0003243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth the occurrence of splicing of introns longer than about 45 nucleotides is decreased.","definition_xrefs":["PomBase:mah","PMID:23754748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA splicing","termid":"FYPO:0003040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased splicing of long introns","synonyms":[{"name":"decreased splicing of long introns during mitotic cell cycle","type":"related"},{"name":"decreased splicing of long introns during vegetative growth","type":"exact"},{"name":"reduced splicing of long introns","type":"exact"}],"termid":"FYPO:0003243"}


id: PBO:0005581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase pseudogene","termid":"PBO:0005581"}


id: FYPO:0005452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one of two different alleles of a gene is lost more frequently than normal after a double-strand break forms nearby.","definition_xrefs":["PomBase:mah","PMID:17724078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased break-induced loss of heterozygosity","synonyms":[{"name":"increased break-induced loss of heterozygosity during mitotic cell cycle","type":"related"},{"name":"increased break-induced loss of heterozygosity during vegetative growth","type":"exact"}],"termid":"FYPO:0005452"}


id: GO:0032373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"positively_regulates","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sterol transport","synonyms":[{"name":"activation of sterol transport","type":"narrow"},{"name":"stimulation of sterol transport","type":"narrow"},{"name":"up regulation of sterol transport","type":"exact"},{"name":"up-regulation of sterol transport","type":"exact"},{"name":"upregulation of sterol transport","type":"exact"}],"termid":"GO:0032373"}


id: FYPO:0005246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing melibiose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0005447","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on melibiose carbon source","synonyms":[{"name":"decreased growth on melibiose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on melibiose carbon source","type":"exact"},{"name":"reduced cell growth on melibiose carbon source","type":"related"},{"name":"slow cell growth on melibiose carbon source","type":"narrow"}],"termid":"FYPO:0005246"}


id: PBO:0052950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase suppressor of ras 1 pseudogene 1","termid":"PBO:0052950"}


id: MONDO:0004067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the gallbladder. It is characterized by the presence of extracellular mucin that constitutes more than fifty-percent of the tumor.","definition_xrefs":["NCIT:C5744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"gallbladder adenocarcinoma","termid":"MONDO:0006215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"gallbladder mucinous adenocarcinoma","secondary_identifiers":["DOID:6998","MEDGEN:234292","UMLS:C1333750"],"synonyms":[{"name":"colloid carcinoma of gallbladder","type":"exact"},{"name":"colloid carcinoma of the gallbladder","type":"exact"},{"name":"colloidal carcinoma of gallbladder","type":"exact"},{"name":"colloidal carcinoma of the gallbladder","type":"exact"},{"name":"gall bladder mucinous adenocarcinoma","type":"exact"},{"name":"gallbladder colloid carcinoma","type":"exact"},{"name":"gallbladder colloidal carcinoma","type":"exact"},{"name":"gallbladder mucinous adenocarcinoma","type":"exact"},{"name":"gallbladder mucinous carcinoma","type":"related"},{"name":"mucinous carcinoma of gallbladder","type":"exact"},{"name":"mucinous carcinoma of the gallbladder","type":"exact"}],"termid":"MONDO:0004067","xrefs":{"Monarch":{"xref_id":"0004067"}}}


id: PBO:0078384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three prime repair exonuclease 1","termid":"PBO:0078384"}


id: GO:0021602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cranial nerves are generated and organized. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial nerve morphogenesis","termid":"GO:0021602"}


id: PBO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase Tpt1 (predicted)","termid":"PBO:0002449"}


id: PR:000045537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1","termid":"PR:000027715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1289.03c","synonyms":[{"name":"Spom-spi1","type":"exact"}],"termid":"PR:000045537"}


id: PBO:0078521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 11","termid":"PBO:0078521"}


id: PBO:0062470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 161 pseudogene","termid":"PBO:0062470"}


id: PBO:0069766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1049, pseudogene","termid":"PBO:0069766"}


id: GO:0003779
data:
  {"annotated_genes":["SJAG_02245","SJAG_02431","SJAG_02566","SJAG_00152","SJAG_02700","SJAG_03011","SJAG_01268","SJAG_04982","SJAG_00938","SJAG_04001","SJAG_01943","SJAG_02396","SJAG_03703","SJAG_03455","SJAG_00521","SJAG_03465","SJAG_03025","SJAG_03229","SJAG_03119","SJAG_01384","SJAG_04621","SJAG_02075","SJAG_00970","SJAG_04703","SJAG_04100","SJAG_03086","SJAG_03380","SJAG_04886","SJAG_01894","SJAG_01754","SJAG_03088","SJAG_01993","SJAG_04141","SJAG_01964","SJAG_00677","SJAG_00279","SJAG_04498","SJAG_01598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61625,62577,66178,68276,69650,69693,70084,70613,71498],"is_not":false,"summary":null,"term":"GO:0003779"},{"annotations":[73756,70711,75921,71278,70315,75098,71872,76948,77761,78080,78488,79370,80042,80296,80528,76035,76984,79497,74740,78156,79313,70325,76681,76762,79958,75270,76378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051015"},{"annotations":[77554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003786"},{"annotations":[76033,72393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003785"}]},"cv_name":"molecular_function","definition":"Binding to monomeric or multimeric forms of actin, including actin filaments.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01598":null,"SJAG_01754":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02245":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03229":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_03465":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04141":null,"SJAG_04498":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04886":null,"SJAG_04982":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"actin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null},"synonyms":[{"name":"membrane associated actin binding","type":"narrow"}],"termid":"GO:0003779","terms_by_termid":{"GO:0003779":null,"GO:0003785":null,"GO:0003786":null,"GO:0051015":null}}


id: PATO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001130 ratio value (obsolete PATO:0001130)","termid":"PATO:0001130"}


id: MONDO:0700153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the lung in dogs and is characterized by the presence of malignant glandular epithelial cells.","definition_xrefs":["NCIT:C129299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099"},{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine lung adenocarcinoma","termid":"MONDO:0700153","xrefs":{"Monarch":{"xref_id":"0700153"}}}


id: PR:O14189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC10F6.17c gene.","definition_xrefs":["UniProtKB:O14189","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog C10F6.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.17c","synonyms":[{"name":"Spom972h-SPAC10F6.17c","type":"exact"},{"name":"pyruvate dehydrogenase (Lipoamide) phosphatase C10F6.17c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14189"}


id: GO:0009342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses glutamate synthase (NADPH) activity.","definition_xrefs":["PMID:4565085","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase complex","termid":"GO:0031026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutamate synthase complex (NADPH)","termid":"GO:0009342"}


id: GO:0061273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric distal tubule are generated and organized. The mesonephric distal tubule is a mesonephric nephron tubule that begins at the macula densa and extends to the mesonephric connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"},{"relation_name":"is_a","term_name":"distal tubule morphogenesis","termid":"GO:0072156"},{"relation_name":"part_of","term_name":"mesonephric distal tubule development","termid":"GO:0061274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric distal tubule morphogenesis","termid":"GO:0061273"}


id: PBO:0044231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain containing 2","termid":"PBO:0044231"}


id: GO:1903559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-cyano-L-alanine.","definition_xrefs":["PMID:24100226","GO_REF:0000068","GOC:kmv","PMID:24843024","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile catabolic process","termid":"GO:0050899"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"3-cyano-L-alanine metabolic process","termid":"GO:1903558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-cyano-L-alanine catabolic process","synonyms":[{"name":"3-cyano-L-alanine breakdown","type":"exact"},{"name":"3-cyano-L-alanine catabolism","type":"exact"},{"name":"3-cyano-L-alanine degradation","type":"exact"}],"termid":"GO:1903559"}


id: GO:0007553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development, including the metamorphosis of immature forms and the development of the reproductive system and the maturation of oocytes in adult females.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of ecdysteroid metabolic process","synonyms":[{"name":"regulation of ecdysteroid metabolism","type":"exact"}],"termid":"GO:0007553"}


id: GO:0006044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylglucosamine metabolic process","synonyms":[{"name":"N-acetylglucosamine metabolism","type":"exact"}],"termid":"GO:0006044"}


id: MONDO:0002989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm composed of fibroblastic spindle cells in a whorled storiform pattern. It is characterized by the presence of foam cells, inflammatory cells, hemosiderin deposition and stromal hemorrhage.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytoma","termid":"MONDO:0005509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign fibrous histiocytoma","secondary_identifiers":["ICDO:8830/0","MESH:D018219","DOID:4415","MEDGEN:60199","NCIT:C3739","UMLS:C0206644"],"synonyms":[{"name":"benign fibrous histiocytoma","type":"exact"},{"name":"benign fibrous histiocytoma (morphologic abnormality)","type":"exact"},{"name":"fibrous histiocytoma","type":"exact"},{"name":"fibrous histiocytoma NOS (morphologic abnormality)","type":"exact"},{"name":"fibroxanthoma","type":"exact"},{"name":"fibroxanthoma NOS (morphologic abnormality)","type":"exact"},{"name":"histiocytoma, fibrous, benign","type":"exact"}],"termid":"MONDO:0002989","xrefs":{"Monarch":{"xref_id":"0002989"}}}


id: FYPO:0005133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the ascospore wall is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to ascospore wall","synonyms":[{"name":"decreased protein localisation to ascospore wall","type":"exact"},{"name":"decreased protein localization to spore wall","type":"exact"},{"name":"reduced protein localization to ascospore wall","type":"exact"}],"termid":"FYPO:0005133"}


id: PBO:0003503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase (predicted)","termid":"PBO:0003503"}


id: _global:is_magnitude_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_magnitude_of","termid":"_global:is_magnitude_of"}


id: MONDO:0012596
data:
  {"annotated_genes":["SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86847],"is_not":false,"summary":null,"term":"MONDO:0012596"}]},"cv_name":"mondo","definition":"Phosphoserine aminotransferase deficiency is an extremely rare form of serine deficiency syndrome characterized clinically in the two reported cases to date by acquired microcephaly, psychomotor retardation, intractable seizures and hypertonia.","definition_xrefs":["Orphanet:284417"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"neurometabolic disorder due to serine deficiency","termid":"MONDO:0018162"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"PSAT deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:718603002","GARD:13273","MEDGEN:410026","MESH:C567032","UMLS:C1970253","OMIM:610992","DOID:0050723"],"synonyms":[{"name":"PSAT deficiency","type":"exact"},{"name":"PSATD","type":"related"},{"name":"phosphoserine aminotransferase deficiency","type":"exact"}],"termid":"MONDO:0012596","terms_by_termid":{"MONDO:0012596":null},"xrefs":{"Monarch":{"xref_id":"0012596"}}}


id: FYPO:0007983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during mitotic interphase in which some microtubule bundles are not anchored to the nuclear membrane. See PMID:15068790","definition_xrefs":["PomBase:mlr","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"microtubule bundles detached from the nuclear envelope","termid":"FYPO:0007983"}


id: FYPO:0006021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:28366642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","termid":"FYPO:0007536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during vegetative growth","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes","type":"exact"}],"termid":"FYPO:0006021"}


id: PBO:0074448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small leucine rich protein 1","termid":"PBO:0074448"}


id: MONDO:0018438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"eosinophilic gastrointestinal disease","secondary_identifiers":["NANDO:2200807","MEDGEN:1826142","Orphanet:402029","UMLS:C5680014","NANDO:1200454","GARD:21714"],"synonyms":[{"name":"EGID","type":"exact"},{"name":"primary eosinophilic gastrointestinal disease","type":"exact"}],"termid":"MONDO:0018438","xrefs":{"Monarch":{"xref_id":"0018438"}}}


id: PBO:0085283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane signal receptor for peroxisomal matrix proteins; receptor for the C-terminal tripeptide signal sequence (PTS1) of peroxisomal matrix proteins; required for peroxisomal matrix protein import; also proposed to have PTS1-receptor independent functions","termid":"PBO:0085283"}


id: PBO:0044993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphanous related formin 1","termid":"PBO:0044993"}


id: MONDO:0002910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the common peroneal nerve or its branches, the deep and superficial peroneal nerves. Lesions of the deep peroneal nerve are associated with paralysis of dorsiflexion of the ankle and toes and loss of sensation from the web space between the first and second toe. Lesions of the superficial peroneal nerve result in weakness or paralysis of the peroneal muscles (which evert the foot) and loss of sensation over the dorsal and lateral surface of the leg. Traumatic injury to the common peroneal nerve near the head of the fibula is a relatively common cause of this condition. (From Joynt, Clinical Neurology, 1995, Ch51, p31)","definition_xrefs":["MESH:D020427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"peroneal neuropathy","secondary_identifiers":["DOID:4201","NCIT:C27596","MEDGEN:148182","UMLS:C0747533"],"synonyms":[{"name":"peroneal neuropathy","type":"exact"}],"termid":"MONDO:0002910","xrefs":{"Monarch":{"xref_id":"0002910"}}}


id: PBO:0053245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 1","termid":"PBO:0053245"}


id: MONDO:0850267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute megakaryocytic leukemia that is characterized by fusion oncogenes involving transcriptional regulators in childhood.","definition_xrefs":["DOID:0080794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute megakaryoblastic leukemia","termid":"MONDO:0018872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"childhood acute megakaryoblastic leukemia","secondary_identifiers":["MEDGEN:79023","UMLS:C0279650","NCIT:C7972"],"termid":"MONDO:0850267","xrefs":{"Monarch":{"xref_id":"0850267"}}}


id: PBO:0072316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 2","termid":"PBO:0072316"}


id: GO:0005085
data:
  {"annotated_genes":["SJAG_03246","SJAG_01367","SJAG_04653","SJAG_00858","SJAG_02307","SJAG_04771","SJAG_05210","SJAG_04982","SJAG_01415","SJAG_03678","SJAG_03002","SJAG_02833","SJAG_04491","SJAG_01659","SJAG_01030","SJAG_02819","SJAG_01025","SJAG_04010","SJAG_05184","SJAG_03488","SJAG_03704","SJAG_02248","SJAG_02486","SJAG_01309","SJAG_02493","SJAG_00143","SJAG_03581","SJAG_02027","SJAG_04837","SJAG_04615","SJAG_06588","SJAG_02004","SJAG_00216","SJAG_00514","SJAG_03089","SJAG_03705","SJAG_02645","SJAG_00064","SJAG_03600","SJAG_01699","SJAG_00807","SJAG_03142","SJAG_01576","SJAG_02529","SJAG_02160","SJAG_02368","SJAG_04464","SJAG_02471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56959,57027,57309,57456,57758,58107,61298,62231,63386,64810,65348,66622,68951,69613,69909,70349,71888,72261,72401,72685,72735,74256,74281,74524,75025,75730,77787,78518,78553,78920,79206,79830,80752,91329,91520,92441,93099,94370,94646,97632,98049,98293,99429,106742,107321,108634,115864,116831],"is_not":false,"summary":null,"term":"GO:0005085"}]},"cv_name":"molecular_function","definition":"Stimulates the exchange of GDP to GTP on a signaling GTPase, changing its conformation to its active form. Guanine nucleotide exchange factors (GEFs) act by stimulating the release of guanosine diphosphate (GDP) to allow binding of guanosine triphosphate (GTP), which is more abundant in the cell under normal cellular physiological conditions.","definition_xrefs":["PMID:23303910","GOC:mah","PMID:27218782","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase regulator activity","termid":"GO:0030695"},{"relation_name":"negatively_regulates","term_name":"GDP binding","termid":"GO:0019003"},{"relation_name":"positively_regulates","term_name":"GTP binding","termid":"GO:0005525"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00143":null,"SJAG_00216":null,"SJAG_00514":null,"SJAG_00807":null,"SJAG_00858":null,"SJAG_01025":null,"SJAG_01030":null,"SJAG_01309":null,"SJAG_01367":null,"SJAG_01415":null,"SJAG_01576":null,"SJAG_01659":null,"SJAG_01699":null,"SJAG_02004":null,"SJAG_02027":null,"SJAG_02160":null,"SJAG_02248":null,"SJAG_02307":null,"SJAG_02368":null,"SJAG_02471":null,"SJAG_02486":null,"SJAG_02493":null,"SJAG_02529":null,"SJAG_02645":null,"SJAG_02819":null,"SJAG_02833":null,"SJAG_03002":null,"SJAG_03089":null,"SJAG_03142":null,"SJAG_03246":null,"SJAG_03488":null,"SJAG_03581":null,"SJAG_03600":null,"SJAG_03678":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_04010":null,"SJAG_04464":null,"SJAG_04491":null,"SJAG_04615":null,"SJAG_04653":null,"SJAG_04771":null,"SJAG_04837":null,"SJAG_04982":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_06588":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0003924"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0003824","GO:0016787","GO:0003924"],"is_obsolete":false,"name":"guanyl-nucleotide exchange factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5637808","Reactome:R-HSA-8964604","Reactome:R-HSA-9017491","Reactome:R-HSA-9640167","Reactome:R-HSA-2485180","Reactome:R-HSA-399995","Reactome:R-HSA-8876188","Reactome:R-HSA-9666430","Reactome:R-HSA-5655277","Reactome:R-HSA-8877311","Reactome:R-HSA-8877475","Reactome:R-HSA-418856","Reactome:R-HSA-5654413","Reactome:R-HSA-8876190","Reactome:R-HSA-8851827","Reactome:R-HSA-8851899","Reactome:R-HSA-9014433","Reactome:R-HSA-9026891","Reactome:R-HSA-9665009","Reactome:R-HSA-5218829","Reactome:R-HSA-5694409","GO:0017112","Reactome:R-HSA-392054","Reactome:R-HSA-749453","Reactome:R-HSA-8877813","Reactome:R-HSA-9639286","Reactome:R-HSA-9665700","Reactome:R-HSA-5218850","Reactome:R-HSA-1433471","Reactome:R-HSA-420883","Reactome:R-HSA-400092","GO:0030676","Reactome:R-HSA-8876616","Reactome:R-HSA-419166","Reactome:R-HSA-9619803","Reactome:R-HSA-5655241","Reactome:R-HSA-1250463","Reactome:R-HSA-8877451","Reactome:R-HSA-1433415","Reactome:R-HSA-177938","Reactome:R-HSA-392870","Reactome:R-HSA-3965444","Reactome:R-HSA-3928628","Reactome:R-HSA-418579","Reactome:R-HSA-825631","Reactome:R-HSA-180687","Reactome:R-HSA-8850041","Reactome:R-HSA-8876193","Reactome:R-HSA-8877308","Reactome:R-HSA-8877998","Reactome:R-HSA-9018747","Reactome:R-HSA-8876837","Reactome:R-HSA-114544","Reactome:R-HSA-2424476","Reactome:R-HSA-9695853","Reactome:R-HSA-8848618","Reactome:R-HSA-3928633","Reactome:R-HSA-5686318","Reactome:R-HSA-751029","Reactome:R-HSA-194518","Reactome:R-HSA-3928632","Reactome:R-HSA-2179407","Reactome:R-HSA-9751201","Reactome:R-HSA-9036301","Reactome:R-HSA-9607304","Reactome:R-HSA-6811429","GO:0005086","Reactome:R-HSA-416588","Reactome:R-HSA-9018768","GO:0005088","Reactome:R-HSA-9666428","Reactome:R-HSA-445064","Reactome:R-HSA-5686071","Reactome:R-HSA-205039","Reactome:R-HSA-418850","GO:0016219","Reactome:R-HSA-5672965","Reactome:R-HSA-8875591","Reactome:R-HSA-8982637","Reactome:R-HSA-9018804","Reactome:R-HSA-8875318","Reactome:R-HSA-9665408","Reactome:R-HSA-9680385","GO:0008321","Reactome:R-HSA-210977","Reactome:R-HSA-5654647","Reactome:R-HSA-9018825","Reactome:R-HSA-9703441","Reactome:R-HSA-442291","Reactome:R-HSA-939265","Reactome:R-HSA-8982640","Reactome:R-HSA-9032798","Reactome:R-HSA-9624845","Reactome:R-HSA-1250383","Reactome:R-HSA-2029445","Reactome:R-HSA-354173","GO:0019839","Reactome:R-HSA-442732","Reactome:R-HSA-4093336","Reactome:R-HSA-8851877","Reactome:R-HSA-8876454","Reactome:R-HSA-9018817","Reactome:R-HSA-8877760","Reactome:R-HSA-9665404","Reactome:R-HSA-9013435","Reactome:R-HSA-5655347","Reactome:R-HSA-2730840","Reactome:R-HSA-169904","Reactome:R-HSA-1168636","Reactome:R-HSA-392195","Reactome:R-HSA-109817","Reactome:R-HSA-6811418","Reactome:R-HSA-8980691","Reactome:R-HSA-9013109","Reactome:R-HSA-9013159","Reactome:R-HSA-3928592","Reactome:R-HSA-379044","Reactome:R-HSA-5617816","Reactome:R-HSA-8875320","Reactome:R-HSA-9665707","Reactome:R-HSA-9670436","Reactome:R-HSA-379048","Reactome:R-HSA-9672163","Reactome:R-HSA-9013023","GO:0005090","Reactome:R-HSA-109807","Reactome:R-HSA-5654402","Reactome:R-HSA-5623521","GO:0017034","Reactome:R-HSA-1225957","GO:0005089","Reactome:R-HSA-428917","Reactome:R-HSA-9032067","Reactome:R-HSA-5637806","Reactome:R-HSA-187746","Reactome:R-HSA-203977","Reactome:R-HSA-2029467","Reactome:R-HSA-9664991","Reactome:R-HSA-8875568","Reactome:R-HSA-380073","Reactome:R-HSA-442273","Reactome:R-HSA-5218839","Reactome:R-HSA-8877612","Reactome:R-HSA-2424477","Reactome:R-HSA-5654392","Reactome:R-HSA-389350","Reactome:R-HSA-9672170","Reactome:R-HSA-177945","Reactome:R-HSA-5654426","Reactome:R-HSA-428750","Reactome:R-HSA-9029158","Reactome:R-HSA-1306972","Reactome:R-HSA-9033292","GO:0016220","GO:0017132","Reactome:R-HSA-1250498","Reactome:R-HSA-3928642","Reactome:R-HSA-5623508","Reactome:R-HSA-9634418","Reactome:R-HSA-2029451","Reactome:R-HSA-171026","Reactome:R-HSA-3928612","Reactome:R-HSA-399938","Reactome:R-HSA-3928651","Reactome:R-HSA-5654600","Reactome:R-HSA-5655326","Reactome:R-HSA-170979","Reactome:R-HSA-9013143","Reactome:R-HSA-389348","Reactome:R-HSA-350769","Reactome:R-HSA-416530","Reactome:R-HSA-9014296","Reactome:R-HSA-428535","Reactome:R-HSA-5654618","Reactome:R-HSA-156913","Reactome:R-HSA-8876191","Reactome:R-HSA-6807868","Reactome:R-HSA-5654663","Reactome:R-HSA-9660824","Reactome:R-HSA-1225951","GO:0008433","Reactome:R-HSA-9693111","Reactome:R-HSA-8876615","GO:0005087","Reactome:R-HSA-186834","Reactome:R-HSA-442314","Reactome:R-HSA-6811414"],"synonyms":[{"name":"ARF guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"GDP-dissociation stimulator activity","type":"exact"},{"name":"GDS","type":"exact"},{"name":"GEF","type":"exact"},{"name":"GNRP","type":"narrow"},{"name":"Rab guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rac guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ral guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ran guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rap guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ras guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rho guanine nucleotide exchange factor","type":"exact"},{"name":"Rho guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"RhoGEF","type":"exact"},{"name":"Sar guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"cAMP-dependent guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"guanyl-nucleotide release factor activity","type":"exact"},{"name":"guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:0005085","terms_by_termid":{"GO:0005085":null}}


id: GO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxyguanosine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine biosynthetic process","termid":"GO:0042452"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyguanosine salvage","termid":"GO:0006180"}


id: GO:0060814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a mRNA is transported to and maintained in the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"posterior mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"posterior mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060814"}


id: PBO:0068036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 341","termid":"PBO:0068036"}


id: PBO:0048697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS3 antisense RNA 2","termid":"PBO:0048697"}


id: PBO:0078919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 8-1","termid":"PBO:0078919"}


id: PBO:0077462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184C divergent transcript","termid":"PBO:0077462"}


id: MONDO:0019509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous leukocytoclastic angiitis is a small-vessel vasculitis presenting with palpable purpura and urticarial lesions which predate the purpuric lesions most frequently observed on the legs. Systemic symptoms including fever, cough, hemoptysis, sinusitis, arthralgia, arthritis, myalgia, abdominal pain, diarrhea, hematochezia, paresthesia, weakness, and hematuria may be observed. Skin biopsy reveals exudates rich in neutrophils, endothelial damage, fibrin deposition, and leukocytoclasis in postcapillary venules of small vessels. Cutaneous leukocytoclastic angiitis can be idiopathic (in up to 50% of cases) or secondary to infections, medications (such as antituberculosis medication), collagen vascular diseases, or neoplasms.","definition_xrefs":["Orphanet:889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex mediated vasculitis","termid":"MONDO:0015491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous leukocytoclastic angiitis","secondary_identifiers":["MEDGEN:881641","icd11.foundation:71458216","GARD:7851","NCIT:C122919","SCTID:718217000","UMLS:C4049638"],"synonyms":[{"name":"cutaneous hypersensitivity vasculitis","type":"exact"},{"name":"cutaneous leukocytoclastic vasculitis","type":"exact"},{"name":"cutaneous small vessel vasculitis","type":"exact"},{"name":"cutaneous small-vessel vasculitis","type":"exact"},{"name":"hypersensitivity angiitis","type":"exact"},{"name":"leukocytoclastic angiitis","type":"related"}],"termid":"MONDO:0019509","xrefs":{"Monarch":{"xref_id":"0019509"}}}


id: PBO:0066297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member Y, pseudogene","termid":"PBO:0066297"}


id: PBO:0005203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane insertion protein Get4 (predicted)","termid":"PBO:0005203"}


id: PBO:0041666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK2 associated cullin domain 1","termid":"PBO:0041666"}


id: PBO:0108764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, nutrient sensing, zf-GATA-type Gaf1","termid":"PBO:0108764"}


id: FYPO:0003663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA pyrophosphohydrolase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA pyrophosphohydrolase activity","termid":"FYPO:0003663"}


id: PBO:0086690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by cell wall perturbation","termid":"PBO:0086690"}


id: FYPO:0005799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule plus ends remain in contact with the cell cortex at cell tips for a shorter time than normal.","definition_xrefs":["PMID:11007487","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"decreased microtubule dwell time at cell tip","synonyms":[{"name":"decreased microtubule dwell time at cell end","type":"exact"},{"name":"decreased microtubule dwell time at cell tip during mitotic cell cycle","type":"related"},{"name":"decreased microtubule dwell time at cell tip during vegetative growth","type":"exact"},{"name":"decreased microtubule plus end dwell time at cell tip","type":"exact"},{"name":"reduced microtubule dwell time at cell tip","type":"exact"}],"termid":"FYPO:0005799"}


id: PBO:0083873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein required for both the G1/S and G2/M phase transitions; modular substrate specificity factor which associates with core SCF (Cdc53p, Skp1p and Hrt1p/Rbx1p) to form the SCFCdc4 complex; SCFCdc4 acts as a ubiquitin-protein ligase directing ubiquitination of cyclin-dependent kinase (CDK) phosphorylated substrates, such as: Sic1p, Far1p, Cdc6p, Clb6p, and Cln3p","termid":"PBO:0083873"}


id: PBO:0090389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase-like, unknown specificity","termid":"PBO:0090389"}


id: FYPO:0004202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which spliced forms of RNAs transcribed from dg repeats in the centromere outer repeat region are present at lower levels than normal.","definition_xrefs":["PomBase:mah","PMID:25274039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased centromeric outer repeat transcript level","termid":"FYPO:0003094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased spliced cen-dg RNA level","synonyms":[{"name":"decreased level of spliced cen-dg RNA","type":"exact"},{"name":"decreased level of spliced cen-dg transcripts","type":"exact"},{"name":"decreased level of spliced centromeric dg repeat RNA","type":"exact"},{"name":"decreased level of spliced centromeric dg repeat transcripts","type":"exact"},{"name":"decreased spliced cen-dg RNA accumulation","type":"related"},{"name":"decreased spliced cen-dg RNA level during mitotic cell cycle","type":"related"},{"name":"decreased spliced cen-dg RNA level during vegetative growth","type":"exact"},{"name":"decreased spliced cen-dg transcript level","type":"exact"},{"name":"reduced spliced cen-dg RNA level","type":"exact"}],"termid":"FYPO:0004202"}


id: MONDO:0012651
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87069],"is_not":false,"summary":null,"term":"MONDO:0012651"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 58 is a rare, complex subtype of hereditary spastic paraplegia characterized by variable onset of slowly progressive lower limb spasticity and weakness and prominent cerebellar ataxia, associated with gait disturbances, dysarthria, increased deep tendon reflexes and extensor plantar responses. Additional features may include involuntary movements (i.e. clonus, tremor, fasciculations, chorea), decreased vibration sense, oculomotor abnormalities (e.g. nystagmus) and distal amyotrophy in the upper and lower limbs.","definition_xrefs":["Orphanet:397946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic ataxia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:611302","UMLS:C1969796","DOID:0050941","MEDGEN:370750","MESH:C566969","GARD:17644"],"synonyms":[{"name":"KIF1C spastic ataxia","type":"exact"},{"name":"SPAX2","type":"exact"},{"name":"SPG58","type":"exact"},{"name":"autosomal recessive spastic ataxia type 2","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 58","type":"related"},{"name":"spastic ataxia 2","type":"exact"},{"name":"spastic ataxia 2, autosomal recessive","type":"related"},{"name":"spastic ataxia caused by mutation in KIF1C","type":"exact"},{"name":"spastic ataxia type 2","type":"exact"}],"termid":"MONDO:0012651","terms_by_termid":{"MONDO:0012651":null},"xrefs":{"Monarch":{"xref_id":"0012651"}}}


id: RO:HOM0000045
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that is characterized by topological discordance between a gene tree and a species tree attributable to the phylogenetic sorting of genetic polymorphisms across successive nodes in a species tree.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_hemiplasy_relationship_with","synonyms":[{"name":"hemiplasous to","type":"exact"}],"termid":"RO:HOM0000045"}


id: PBO:0005815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm8 (predicted)","termid":"PBO:0005815"}


id: PBO:0086933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles","termid":"PBO:0086933"}


id: GO:0004425
data:
  {"annotated_genes":["SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79561],"is_not":false,"summary":null,"term":"GO:0004425"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate = 1-(indol-3-yl)glycerol 3-phosphate + CO2 + H2O.","definition_xrefs":["EC:4.1.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"indole-3-glycerol-phosphate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:IGPSYN-RXN","RHEA:23476"],"synonyms":[{"name":"1-(2-carboxyphenylamino)-1-deoxy-D-ribulose-5-phosphate carboxy-lyase (cyclizing)","type":"related"},{"name":"1-(2-carboxyphenylamino)-1-deoxy-D-ribulose-5-phosphate carboxy-lyase [cyclizing; 1-C-(3-indolyl)-glycerol-3-phosphate-forming]","type":"related"},{"name":"indole-3-glycerophosphate synthase activity","type":"related"},{"name":"indoleglycerol phosphate synthase activity","type":"related"},{"name":"indoleglycerol phosphate synthetase activity","type":"related"}],"termid":"GO:0004425","terms_by_termid":{"GO:0004425":null}}


id: GO:1902018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cilium assembly.","definition_xrefs":["PMID:17719545","GOC:TermGenie","GOC:dph","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of cilium assembly","synonyms":[{"name":"down regulation of ciliogenesis","type":"exact"},{"name":"down regulation of cilium assembly","type":"exact"},{"name":"down regulation of cilium biogenesis","type":"related"},{"name":"down-regulation of ciliogenesis","type":"exact"},{"name":"down-regulation of cilium assembly","type":"exact"},{"name":"down-regulation of cilium biogenesis","type":"related"},{"name":"downregulation of ciliogenesis","type":"exact"},{"name":"downregulation of cilium assembly","type":"exact"},{"name":"downregulation of cilium biogenesis","type":"related"},{"name":"inhibition of ciliogenesis","type":"exact"},{"name":"inhibition of cilium assembly","type":"narrow"},{"name":"inhibition of cilium biogenesis","type":"related"},{"name":"negative regulation of ciliogenesis","type":"exact"},{"name":"negative regulation of cilium biogenesis","type":"related"}],"termid":"GO:1902018"}


id: MONDO:0002677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm composed of fibroblasts, and characterized by collagen production and usually a herringbone architectural pattern.","definition_xrefs":["NCIT:C9429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"conventional fibrosarcoma","secondary_identifiers":["DOID:3517","MEDGEN:232393","UMLS:C1333156"],"synonyms":[{"name":"classic fibrosarcoma","type":"exact"},{"name":"classical fibrosarcoma","type":"exact"},{"name":"conventional fibrosarcoma","type":"exact"}],"termid":"MONDO:0002677","xrefs":{"Monarch":{"xref_id":"0002677"}}}


id: PR:Q9HDU6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pan5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-dehydropantoate 2-reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.09c","synonyms":[{"name":"KPA reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"KPR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pan5","type":"exact"},{"name":"ketopantoate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDU6"}


id: MONDO:0014614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital stationary night blindness characterized by autosomal recessive inheritance that has material basis in homozygous mutation in the GNAT1 gene on chromosome 3p21.","definition_xrefs":["DOID:0110714","PMID:22190596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"congenital stationary night blindness 1G","secondary_identifiers":["OMIM:616389","GARD:16099","UMLS:C4225345","MEDGEN:906532"],"synonyms":[{"name":"CSNB1G","type":"exact"},{"name":"congenital stationary night blindness type 1G","type":"exact"},{"name":"night blindness, congenital stationary, type 1G","type":"related"}],"termid":"MONDO:0014614","xrefs":{"Monarch":{"xref_id":"0014614"}}}


id: PBO:0005590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad5","termid":"PBO:0005590"}


id: PBO:0085661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in negative regulation of iron regulon transcription; forms an iron independent complex with Fra2p, Grx3p, and Grx4p; cytosolic; mutant fails to repress transcription of iron regulon and is defective in spore formation","termid":"PBO:0085661"}


id: PBO:0070988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 12","termid":"PBO:0070988"}


id: PBO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase subunit Rfp2","termid":"PBO:0001115"}


id: PBO:0042370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD180 molecule","termid":"PBO:0042370"}


id: GO:0008275
data:
  {"annotated_genes":["SJAG_01215","SJAG_02609","SJAG_07018","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101303,109166,109921,110903],"is_not":false,"summary":null,"term":"GO:0008275"}]},"cv_name":"cellular_component","definition":"A complex usually comprising two gamma-tubulin molecules and two conserved non-tubulin proteins. Some gamma-tubulin small complexes are thought to be the repeating unit making up the core of the gamma-tubulin ring complex.","definition_xrefs":["PMID:11297925","PMID:12134075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex","termid":"GO:0000930"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"gamma-tubulin small complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000928","GO:0000927","GO:0061495"],"synonyms":[{"name":"Tub4 complex","type":"narrow"},{"name":"gamma-tubulin small complex, centrosomal","type":"narrow"},{"name":"gamma-tubulin small complex, mitotic spindle pole body","type":"narrow"},{"name":"gamma-tubulin small complex, spindle pole body","type":"narrow"},{"name":"gammaTuSC","type":"exact"}],"termid":"GO:0008275","terms_by_termid":{"GO:0008275":null}}


id: MONDO:0007256
data:
  {"annotated_genes":["SJAG_02049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86965],"is_not":false,"summary":null,"term":"MONDO:0007256"}]},"cv_name":"mondo","definition":"A malignant tumor that arises from hepatocytes. Hepatocellular carcinoma is relatively rare in the United States but very common in all African countries south of the Sahara and in Southeast Asia. Most cases are seen in patients over the age of 50 years, but this tumor can also occur in younger individuals and even in children. Hepatocellular carcinoma is more common in males than females and is associated with hepatitis B, hepatitis C, chronic alcohol abuse and cirrhosis. Serum elevation of alpha-fetoprotein occurs in a large percentage of patients with hepatocellular carcinoma. Grossly, hepatocellular carcinoma may present as a single mass, as multiple nodules, or as diffuse liver involvement. Microscopically, there is a wide range of differentiation from tumor to tumor (well differentiated to poorly differentiated tumors). Hepatocellular carcinomas quickly metastasize to regional lymph nodes and lung. The overall median survival of untreated liver cell carcinoma is about 4 months. The most effective treatment of hepatocellular carcinoma is complete resection of the tumor. Lately, an increasing number of tumors have been treated with liver transplantation.","definition_xrefs":["NCIT:C3099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02049":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatocellular carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0000182","MedDRA:10049010","NANDO:2200047","ONCOTREE:HCC","GARD:16773","NORD:1907","OMIM:114550","Orphanet:88673","MESH:D006528","DOID:686","UMLS:C2239176","ICDO:8170/3","MEDGEN:389187","DOID:684","icd11.foundation:1294035808"],"synonyms":[{"name":"HCC","type":"exact"},{"name":"adult hepatoma","type":"narrow"},{"name":"adult primary hepatocellular carcinoma","type":"narrow"},{"name":"cancer, hepatocellular","type":"exact"},{"name":"carcinoma of liver","type":"exact"},{"name":"carcinoma of liver cells","type":"exact"},{"name":"carcinoma of the liver cells","type":"exact"},{"name":"carcinoma, hepatocellular, malignant","type":"exact"},{"name":"hepatoblastoma","type":"related"},{"name":"hepatoblastoma caused by somatic mutation","type":"related"},{"name":"hepatoblastoma, somatic","type":"exact"},{"name":"hepatocellular adenocarcinoma","type":"exact"},{"name":"hepatocellular cancer","type":"exact"},{"name":"hepatocellular cancer, somatic","type":"exact"},{"name":"hepatocellular carcinoma","type":"exact"},{"name":"hepatocellular carcinoma, childhood type, somatic","type":"exact"},{"name":"hepatocellular carcinoma, somatic","type":"exact"},{"name":"hepatoma","type":"exact"},{"name":"liver and intrahepatic bile duct carcinoma","type":"related"},{"name":"liver cancer","type":"related"},{"name":"liver carcinoma","type":"exact"},{"name":"liver cell cancer (hepatocellular carcinoma)","type":"exact"},{"name":"liver cell carcinoma","type":"exact"},{"name":"primary carcinoma of liver cells","type":"exact"},{"name":"primary carcinoma of the liver cells","type":"exact"}],"termid":"MONDO:0007256","terms_by_termid":{"MONDO:0007256":null},"xrefs":{"Monarch":{"xref_id":"0007256"}}}


id: PBO:0074092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 7","termid":"PBO:0074092"}


id: GO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of synaptic vesicle membrane (obsolete GO:0030285)","synonyms":[{"name":"integral to synaptic vesicle membrane","type":"narrow"}],"termid":"GO:0030285"}


id: GO:0004506
data:
  {"annotated_genes":["SJAG_00370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77542],"is_not":false,"summary":null,"term":"GO:0004506"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + squalene = (S)-2,3-epoxysqualene + H2O + NADP+.","definition_xrefs":["RHEA:25282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"squalene monooxygenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-191299","KEGG_REACTION:R02874","EC:1.14.14.17","MetaCyc:SQUALENE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"squalene 2,3-oxidocyclase activity","type":"related"},{"name":"squalene epoxidase activity","type":"related"},{"name":"squalene hydroxylase activity","type":"related"},{"name":"squalene oxydocyclase activity","type":"related"},{"name":"squalene,NADPH:oxygen oxidoreductase (2,3-epoxidizing) activity","type":"exact"},{"name":"squalene-2,3-epoxidase activity","type":"related"},{"name":"squalene-2,3-epoxide cyclase activity","type":"related"}],"termid":"GO:0004506","terms_by_termid":{"GO:0004506":null}}


id: GO:1904900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myosin II filament organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22761445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"negative regulation of myosin II filament organization","synonyms":[{"name":"down regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"down regulation of myosin II filament organisation","type":"exact"},{"name":"down regulation of myosin II filament organization","type":"exact"},{"name":"down regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"down-regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"down-regulation of myosin II filament organisation","type":"exact"},{"name":"down-regulation of myosin II filament organization","type":"exact"},{"name":"down-regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"downregulation of myosin II filament assembly or disassembly","type":"related"},{"name":"downregulation of myosin II filament organisation","type":"exact"},{"name":"downregulation of myosin II filament organization","type":"exact"},{"name":"downregulation of myosin II polymerization or depolymerization","type":"related"},{"name":"inhibition of myosin II filament assembly or disassembly","type":"related"},{"name":"inhibition of myosin II filament organisation","type":"narrow"},{"name":"inhibition of myosin II filament organization","type":"narrow"},{"name":"inhibition of myosin II polymerization or depolymerization","type":"related"},{"name":"negative regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"negative regulation of myosin II filament organisation","type":"exact"},{"name":"negative regulation of myosin II polymerization or depolymerization","type":"related"}],"termid":"GO:1904900"}


id: GO:0034406
data:
  {"annotated_genes":["SJAG_04668","SJAG_04483","SJAG_00610","SJAG_04462","SJAG_01255","SJAG_02222","SJAG_01288","SJAG_04659","SJAG_01453","SJAG_04771","SJAG_00876","SJAG_03587","SJAG_01290","SJAG_02192","SJAG_00218","SJAG_01835","SJAG_01787","SJAG_03646","SJAG_05285","SJAG_05001","SJAG_03123","SJAG_01171","SJAG_04666","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[73411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[74843,71250,113494,106432,116148,73413,76195,91919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[78585,102961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[95429,108387,102264,102263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[92744,87833],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[103165,91094,105670,106244,92728,118237,118367],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01171":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0034406","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0046810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F11 antisense RNA 1","termid":"PBO:0046810"}


id: PBO:0041345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 62","termid":"PBO:0041345"}


id: GO:0046433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-aminoethylphosphonate, most abundant and ubiquitous of naturally occurring phosphonates. It is typically found as a conjugate of glycans, lipids, and proteins, which in turn perform essential biochemical functions in specialized lower organisms.","definition_xrefs":["GOC:ai","PMID:12107130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-aminoethylphosphonate metabolic process","synonyms":[{"name":"2-aminoethylphosphonate metabolism","type":"exact"},{"name":"2-phosphonoethylamine metabolic process","type":"exact"},{"name":"2-phosphonoethylamine metabolism","type":"exact"},{"name":"ciliatine metabolic process","type":"exact"},{"name":"ciliatine metabolism","type":"exact"}],"termid":"GO:0046433"}


id: PBO:0047036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 99 member A","termid":"PBO:0047036"}


id: PBO:0109259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120 member B","termid":"PBO:0109259"}


id: PBO:0057025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-2","termid":"PBO:0057025"}


id: MONDO:0060577
data:
  {"annotated_genes":["SJAG_04762"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85541],"is_not":false,"summary":null,"term":"MONDO:0060577"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04762":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, ataxia, and seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22576","MEDGEN:1613354","OMIM:617709","UMLS:C4540188"],"synonyms":[{"name":"NEDMAS","type":"related"},{"name":"neurodevelopmental disorder with microcephaly, ataxia, and seizures","type":"exact"}],"termid":"MONDO:0060577","terms_by_termid":{"MONDO:0060577":null},"xrefs":{"Monarch":{"xref_id":"0060577"}}}


id: FYPO:0004920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a catalytic activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of molecular function","termid":"FYPO:0004919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of catalytic activity","synonyms":[{"name":"normal regulation of catalytic activity during mitotic cell cycle","type":"related"},{"name":"normal regulation of catalytic activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004920"}


id: MONDO:0012431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital diaphragmatic hernia in which the cause of the disease is a mutation in the ZFPM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diaphragmatic hernia","termid":"MONDO:0005711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic hernia 3","secondary_identifiers":["OMIM:610187","MEDGEN:347546","MESH:C565710","GARD:15474","UMLS:C1857781"],"synonyms":[{"name":"DIH3","type":"related"},{"name":"ZFPM2 congenital diaphragmatic hernia","type":"exact"},{"name":"congenital diaphragmatic hernia caused by mutation in ZFPM2","type":"exact"},{"name":"diaphragmatic hernia 3","type":"exact"},{"name":"diaphragmatic hernia type 3","type":"exact"}],"termid":"MONDO:0012431","xrefs":{"Monarch":{"xref_id":"0012431"}}}


id: PBO:0081992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 22","termid":"PBO:0081992"}


id: MONDO:0958110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"atrophic papulosis","secondary_identifiers":["Orphanet:656071"],"termid":"MONDO:0958110","xrefs":{"Monarch":{"xref_id":"0958110"}}}


id: PBO:0046087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 12","termid":"PBO:0046087"}


id: PBO:0063371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prenylcysteine oxidase 1","termid":"PBO:0063371"}


id: PBO:0056831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056831"}


id: PBO:0086113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for clearance of inclusion bodies; localizes to the inclusion bodies formed under protein misfolding stress; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress; IML2 has a paralog, YKR018C, that arose from the whole genome duplication","termid":"PBO:0086113"}


id: PBO:0073274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN9 divergent transcript","termid":"PBO:0073274"}


id: PBO:0088817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER stress response thioredoxin family membrane disulfide oxidoreductase","termid":"PBO:0088817"}


id: PBO:0044747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 25","termid":"PBO:0044747"}


id: PR:Q9P7R3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component MTR3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03895","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component mtr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.08c","secondary_identifiers":["UniProtKB:Q9P7R3"],"synonyms":[{"name":"Spom972h-EXOSC6","type":"exact"}],"termid":"PR:Q9P7R3"}


id: MONDO:0859168
data:
  {"annotated_genes":["SJAG_01665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86659],"is_not":false,"summary":null,"term":"MONDO:0859168"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, myofibrillar, 12, infantile-onset, with cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794147","OMIM:619424","UMLS:C5561937"],"termid":"MONDO:0859168","terms_by_termid":{"MONDO:0859168":null},"xrefs":{"Monarch":{"xref_id":"0859168"}}}


id: PBO:0080130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 9, pseudogene","termid":"PBO:0080130"}


id: MONDO:0014240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any periventricular nodular heterotopia in which the cause of the disease is a mutation in the ERMARD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periventricular nodular heterotopia","termid":"MONDO:0020341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"periventricular nodular heterotopia 6","secondary_identifiers":["GARD:15983","MEDGEN:816202","UMLS:C3809872","OMIM:615544"],"synonyms":[{"name":"ERMARD periventricular nodular heterotopia","type":"exact"},{"name":"PVNH6","type":"related"},{"name":"periventricular nodular heterotopia 6","type":"exact"},{"name":"periventricular nodular heterotopia caused by mutation in ERMARD","type":"exact"},{"name":"periventricular nodular heterotopia type 6","type":"exact"}],"termid":"MONDO:0014240","xrefs":{"Monarch":{"xref_id":"0014240"}}}


id: MONDO:0000709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Crohn disease involving a pathogenic inflammatory response in the ileum.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small bowel Crohn disease","termid":"MONDO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"Crohn ileitis","secondary_identifiers":["ICD9:558.9","MESH:D007079","CSP:1248-5305","DOID:0060189","UMLS:C0267380","SCTID:52457000","NDFRT:N0000001662","NCIT:C35329","MedDRA:10021312","MEDGEN:82754"],"synonyms":[{"name":"Crohn's ileitis","type":"exact"},{"name":"ileitis","type":"related"}],"termid":"MONDO:0000709","xrefs":{"Monarch":{"xref_id":"0000709"}}}


id: GO:2001160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K79 methylation.","definition_xrefs":["PMID:12876294"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K79 methylation (obsolete GO:2001160)","synonyms":[{"name":"regulation of histone H3 K79 methylation","type":"exact"},{"name":"regulation of histone H3K79me","type":"exact"},{"name":"regulation of histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:2001160"}


id: GO:0000103
data:
  {"annotated_genes":["SJAG_01192","SJAG_00084","SJAG_04953","SJAG_04060","SJAG_01693","SJAG_03475","SJAG_05027","SJAG_01702","SJAG_01786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58870,66976,75320,79297,88084,98122,117807],"is_not":false,"summary":null,"term":"GO:0000103"},{"annotations":[100326,80261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019379"}]},"cv_name":"biological_process","definition":"The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00084":null,"SJAG_01192":null,"SJAG_01693":null,"SJAG_01702":null,"SJAG_01786":null,"SJAG_03475":null,"SJAG_04060":null,"SJAG_04953":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfate assimilation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0019378"],"synonyms":[{"name":"sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"sulphate assimilation","type":"exact"},{"name":"sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"}],"termid":"GO:0000103","terms_by_termid":{"GO:0000103":null,"GO:0019379":null}}


id: PBO:0045918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 13","termid":"PBO:0045918"}


id: MONDO:0013695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary nonpolyposis colon cancer in which the cause of the disease is a mutation in the TGFBR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Lynch syndrome","termid":"MONDO:0005835"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0000426"],"is_obsolete":false,"name":"colorectal cancer, hereditary nonpolyposis, type 6","secondary_identifiers":["DOID:0070273","MESH:C566039","OMIM:614331","UMLS:C1860896","GARD:15789","MEDGEN:348732"],"synonyms":[{"name":"HNPCC6","type":"related"},{"name":"TGFBR2 hereditary nonpolyposis colon cancer","type":"exact"},{"name":"colon cancer, hereditary nonpolyposis, type 6","type":"related"},{"name":"colorectal cancer, hereditary nonpolyposis, type 6","type":"exact"},{"name":"hereditary nonpolyposis colon cancer caused by mutation in TGFBR2","type":"exact"}],"termid":"MONDO:0013695","xrefs":{"Monarch":{"xref_id":"0013695"}}}


id: MONDO:0016815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Leigh syndrome with leukodystrophy (obsolete MONDO:0016815)","secondary_identifiers":["Orphanet:255241"],"synonyms":[{"name":"Leigh disease with leukodystrophy","type":"exact"},{"name":"infantile subacute necrotizing encephalopathy with leukodystrophy","type":"exact"}],"termid":"MONDO:0016815","xrefs":{"Monarch":{"xref_id":"0016815"}}}


id: MONDO:0007449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermo-odonto dysplasia belongs to the group of tricho-odonto-onychial dysplasias. It is characterized by signs of variable severity: dry and thin skin, dental anomalies, nail alteration and trichodysplasia. Fourteen cases have been described so far. Autosomal dominant transmission is likely.","definition_xrefs":["Orphanet:1660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermo-odonto dysplasia","secondary_identifiers":["MESH:C565103","GARD:1816","MEDGEN:377602","OMIM:125640","UMLS:C1852144","SCTID:721091003"],"synonyms":[{"name":"DERMOODONTODYSPLASIA","type":"related"},{"name":"dermo odontodysplasia","type":"related"},{"name":"dermo-odonto dysplasia","type":"exact"},{"name":"dermo-odonto-dysplasia","type":"related"},{"name":"dermoodonto dysplasia","type":"related"},{"name":"ectodermal dysplasia, hair-nail-Tooth type","type":"related"}],"termid":"MONDO:0007449","xrefs":{"Monarch":{"xref_id":"0007449"}}}


id: GO:0003218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac ventricle formation","termid":"GO:0003211"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left ventricle formation","termid":"GO:0003218"}


id: MONDO:0019646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital megacalycosis","termid":"MONDO:0019639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"unilateral congenital megacalycosis","secondary_identifiers":["MEDGEN:1842948","Orphanet:93176","GARD:19179","UMLS:C5681456"],"termid":"MONDO:0019646","xrefs":{"Monarch":{"xref_id":"0019646"}}}


id: PBO:0075140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptides B and B1","termid":"PBO:0075140"}


id: null:chado_properties:version
data:
  {"annotation_feature_type":"gene","cv_name":"chado_properties","definition":"Chado schema version","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"version","termid":"null:chado_properties:version"}


id: PBO:0004596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2A subunit (predicted)","termid":"PBO:0004596"}


id: MONDO:0000987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by a change in the gallbladder wall due to excess cholesterol.","definition_xrefs":["Wikipedia:Cholesterolosis_of_gallbladder"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"cholesterolosis of gallbladder","secondary_identifiers":["icd11.foundation:2109132211","DOID:10254","ICD10CM:K82.4","ICD9:575.6","MEDGEN:509042","UMLS:C0152456","SCTID:61565001"],"synonyms":[{"name":"strawberry gallbladder","type":"exact"}],"termid":"MONDO:0000987","xrefs":{"Monarch":{"xref_id":"0000987"}}}


id: FYPO:0008132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which calcium signaling is increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased calcium signaling","synonyms":[{"name":"increased calcium signalling","type":"exact"}],"termid":"FYPO:0008132"}


id: GO:1905610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA cap binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:PARL","PMID:23409027","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA cap binding (obsolete GO:1905610)","termid":"GO:1905610"}


id: MONDO:0044320
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87036,87037],"is_not":false,"summary":null,"term":"MONDO:0044320"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 79","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617460","GARD:16231","MEDGEN:1386200","UMLS:C4479526"],"synonyms":[{"name":"RP79","type":"related"},{"name":"retinitis pigmentosa 79","type":"exact"}],"termid":"MONDO:0044320","terms_by_termid":{"MONDO:0044320":null},"xrefs":{"Monarch":{"xref_id":"0044320"}}}


id: MONDO:0016538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotonia-cystinuria syndrome type 1 (obsolete MONDO:0016538)","termid":"MONDO:0016538","xrefs":{"Monarch":{"xref_id":"0016538"}}}


id: PBO:0001437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof14","termid":"PBO:0001437"}


id: GO:1904399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to heparan sulfate.","definition_xrefs":["GO_REF:0000067","PMID:8567685","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heparan sulfate binding","termid":"GO:1904399"}


id: PBO:0044040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 12","termid":"PBO:0044040"}


id: PR:Q9P6I5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanylate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23117:SF1","OMA:SCHPO02351","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.05","secondary_identifiers":["UniProtKB:Q9P6I5"],"synonyms":[{"name":"GMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GUK1","type":"exact"}],"termid":"PR:Q9P6I5"}


id: FYPO:0005874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of medial membrane band assembly is decreased. Medial membrane band assembly is the assembly of a sterol-rich region of the plasma membrane at the cell surface overlying the contractile ring.","definition_xrefs":["PomBase:mah","GO:0032130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000032","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of medial membrane band assembly","synonyms":[{"name":"decreased rate of medial membrane band assembly during mitotic cell cycle","type":"related"},{"name":"decreased rate of medial membrane band assembly during vegetative growth","type":"exact"},{"name":"decreased rate of medial membrane band formation","type":"exact"},{"name":"reduced rate of medial membrane band assembly","type":"exact"}],"termid":"FYPO:0005874"}


id: PBO:0083249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by fungal homology and RT-PCR","termid":"PBO:0083249"}


id: PBO:0069243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 498, pseudogene","termid":"PBO:0069243"}


id: PBO:0051047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-26","termid":"PBO:0051047"}


id: PATO:0001228
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001228 dull (obsolete PATO:0001228)","termid":"PATO:0001228"}


id: GO:1902213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prolactin signaling pathway.","definition_xrefs":["PMID:11773439","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of prolactin signaling pathway","termid":"GO:1902211"},{"relation_name":"positively_regulates","term_name":"prolactin signaling pathway","termid":"GO:0038161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of prolactin signaling pathway","synonyms":[{"name":"activation of PRL signaling pathway","type":"narrow"},{"name":"activation of prolactin signaling pathway","type":"narrow"},{"name":"activation of prolactin-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of PRL signaling pathway","type":"exact"},{"name":"positive regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"up regulation of PRL signaling pathway","type":"exact"},{"name":"up regulation of prolactin signaling pathway","type":"exact"},{"name":"up regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"up-regulation of PRL signaling pathway","type":"exact"},{"name":"up-regulation of prolactin signaling pathway","type":"exact"},{"name":"up-regulation of prolactin-mediated signaling pathway","type":"exact"},{"name":"upregulation of PRL signaling pathway","type":"exact"},{"name":"upregulation of prolactin signaling pathway","type":"exact"},{"name":"upregulation of prolactin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902213"}


id: PBO:0004541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,6-beta-glucosidase Exg1","termid":"PBO:0004541"}


id: PBO:0111831
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein","termid":"PBO:0111831"}


id: GO:0098963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a messenger ribonucleoprotein complex along microtubules in nerve cell dendrites.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic transport","termid":"GO:0098935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"dendritic transport of messenger ribonucleoprotein complex","synonyms":[{"name":"dendritic transport of mRNA RNP complex","type":"exact"}],"termid":"GO:0098963"}


id: MONDO:0031040
data:
  {"annotated_genes":["SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86202],"is_not":false,"summary":null,"term":"MONDO:0031040"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005066"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620010","UMLS:C5774311","MEDGEN:1824084"],"synonyms":[{"name":"PFIC12","type":"exact"},{"name":"cholestasis, isolated low-ggt","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 12","type":"exact"}],"termid":"MONDO:0031040","terms_by_termid":{"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0031040"}}}


id: PBO:0087785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sugar alcohol phosphatase; polyol phosphatase that hydrolyzes sorbitol-6-phosphate, ribitol-5-phosphate, and (D)-glycerol-3-phosphate, maintaining phosphoglucose isomerase (PGI) activity in the presence of PGI-inhibitory sugar alcohols; expression correlated with growth rate; GFP-fusion protein localizes to the cytoplasm and nucleus; homozygous diploid mutant displays increased glycogen accumulation; member of the haloacid dehalogenase (HAD) superfamily","termid":"PBO:0087785"}


id: PBO:0073346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 8","termid":"PBO:0073346"}


id: PBO:0017851
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leukodystrophy","termid":"PBO:0017851"}


id: FYPO:0003183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing phleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on phleomycin","synonyms":[{"name":"normal cell population growth in presence of phleomycin","type":"exact"},{"name":"normal cell population growth on phleomycin","type":"exact"},{"name":"normal cellular response to phleomycin","type":"related"},{"name":"normal vegetative cell population growth on phleomycin","type":"exact"}],"termid":"FYPO:0003183"}


id: PBO:0078657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 10-1","termid":"PBO:0078657"}


id: GO:0070591
data:
  {"annotated_genes":["SJAG_04236","SJAG_04184","SJAG_03483","SJAG_03587","SJAG_00974","SJAG_04238","SJAG_03057","SJAG_01321","SJAG_04868","SJAG_03013","SJAG_04483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104487,109395,114411,118110,118118],"is_not":false,"summary":null,"term":"GO:0070591"},{"annotations":[94787],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[88531,90572,89025,92093],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[73411],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of an ascospore wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall biogenesis","termid":"GO:0009272"},{"relation_name":"is_a","term_name":"spore wall biogenesis","termid":"GO:0070590"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0030437","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"ascospore wall biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070591","terms_by_termid":{"GO:0030476":null,"GO:0034412":null,"GO:0034413":null,"GO:0070591":null}}


id: PBO:0060219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein 1","termid":"PBO:0060219"}


id: PBO:0083325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SPT15/YER148W","termid":"PBO:0083325"}


id: SO:0000763
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000763 fosmid_clone (obsolete SO:0000763)","termid":"SO:0000763"}


id: PBO:0029872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation","termid":"PBO:0029872"}


id: GO:0032260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus received in the context of the jasmonic acid- and ethylene (ethene)-dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to jasmonic acid","termid":"GO:0009753"},{"relation_name":"part_of","term_name":"jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"response to jasmonic acid stimulus during jasmonic acid and ethylene-dependent systemic resistance","type":"related"}],"termid":"GO:0032260"}


id: PBO:0057287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 507","termid":"PBO:0057287"}


id: PBO:0074006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 7","termid":"PBO:0074006"}


id: PBO:0069719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 999, pseudogene","termid":"PBO:0069719"}


id: PBO:0062660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 1","termid":"PBO:0062660"}


id: PBO:0057162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320a","termid":"PBO:0057162"}


id: FYPO:0004230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to UV","synonyms":[{"name":"normal protein phosphorylation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to ultraviolet light","type":"related"}],"termid":"FYPO:0004230"}


id: GO:0019897
data:
  {"annotated_genes":["SJAG_02444","SJAG_03081","SJAG_02605","SJAG_02233","SJAG_04026"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031234"},{"annotations":[74617,75638,106820,80697],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:curators","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null,"SJAG_02605":null,"SJAG_03081":null,"SJAG_04026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"extrinsic component of plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000157"],"synonyms":[{"name":"extrinsic to plasma membrane","type":"exact"},{"name":"juxtamembrane","type":"broad"},{"name":"peripheral plasma membrane protein","type":"exact"}],"termid":"GO:0019897","terms_by_termid":{"GO:0005834":null,"GO:0031234":null}}


id: MONDO:0004783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete panhypopituitarism (obsolete MONDO:0004783)","termid":"MONDO:0004783","xrefs":{"Monarch":{"xref_id":"0004783"}}}


id: MONDO:0011412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that is characterized by intraneuronal inclusions of mutant neuroserpin resulting in progressive encephalopathy, dementia and seizures and has material basis in a mutation in the SERPINI1 gene inherited in an in autosomal dominant pattern.","definition_xrefs":["DOID:0050831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial encephalopathy with neuroserpin inclusion bodies","secondary_identifiers":["NORD:1123","icd11.foundation:453919434","SCTID:702421006","UMLS:C1858680","GARD:10037","MEDGEN:346965","Orphanet:85110","MESH:C536841","OMIM:604218","ICD9:348.39"],"synonyms":[{"name":"FENIB","type":"exact"},{"name":"encephalopathy, familial, with Collins bodies","type":"related"},{"name":"encephalopathy, familial, with neuroserpin inclusion bodies","type":"related"}],"termid":"MONDO:0011412","xrefs":{"Monarch":{"xref_id":"0011412"}}}


id: PBO:0045606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 17 (pseudogene)","termid":"PBO:0045606"}


id: GO:0052218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near a second organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052218)","synonyms":[{"name":"positive energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052218"}


id: PBO:0077967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 19-1","termid":"PBO:0077967"}


id: GO:0070337
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99686],"is_not":false,"summary":null,"term":"GO:0070337"}]},"cv_name":"molecular_function","definition":"Binding to a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.","definition_xrefs":["GOC:mah","PMID:15189154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flap-structured DNA binding","termid":"GO:0070336"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"3'-flap-structured DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070337","terms_by_termid":{"GO:0070337":null}}


id: PBO:0084551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric region; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme","termid":"PBO:0084551"}


id: MONDO:0012053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry, 2","secondary_identifiers":["GARD:10033","MEDGEN:325285","DOID:0080965","OMIM:608542","UMLS:C1837894","MESH:C536360"],"synonyms":[{"name":"ANIB2","type":"exact"},{"name":"aneurysm, intracranial BERRY, 2","type":"related"}],"termid":"MONDO:0012053","xrefs":{"Monarch":{"xref_id":"0012053"}}}


id: MONDO:1011998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary open angle glaucoma, non-human animal","secondary_identifiers":["OMIA:002046"],"termid":"MONDO:1011998","xrefs":{"Monarch":{"xref_id":"1011998"}}}


id: GO:0034717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Gemin6, Gemin7, and unrip (STRAP), and can bind to snRNAs; may play a role in snRNP assembly.","definition_xrefs":["GOC:mah","PMID:17640873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Gemin6-Gemin7-unrip complex","termid":"GO:0034717"}


id: GO:0002582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"}],"termid":"GO:0002582"}


id: PBO:0088587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex WD repeat protein Prp17","termid":"PBO:0088587"}


id: GO:0051265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diolein + mono-olein = triolein + glycerol. Mono-olein, also known as mono-oleoylglycerol, is the monoglyceride formed from oleic acid, 9-octodecenoic acid; diolein is also known as dioleoylglycerol, and triolein as trioleoylglycerol and olein.","definition_xrefs":["GOC:ai","PMID:15364929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"diolein transacylation activity","synonyms":[{"name":"DOG transacylation","type":"exact"},{"name":"acyl-CoA-independent diolein transacylation","type":"exact"},{"name":"dioleoylglycerol O-acyltransferase activity","type":"exact"},{"name":"dioleoylglycerol transacylase activity","type":"exact"}],"termid":"GO:0051265"}


id: PBO:0047727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FN1 divergent transcript","termid":"PBO:0047727"}


id: PR:Q10241
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmb1 gene.","definition_xrefs":["UniProtKB:Q10241","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mismatch-binding protein cmb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.11c","synonyms":[{"name":"Spom972h-cmb1","type":"exact"}],"termid":"PR:Q10241"}


id: PBO:0011516
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbinds SPAC11H11.04 with force 120 pN at probe speed 1.74 um/s","termid":"PBO:0011516"}


id: PBO:0054971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2385","termid":"PBO:0054971"}


id: MONDO:0004069
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id: PBO:0055281
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id: PBO:0077859
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id: PBO:0014234
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id: MONDO:0011983
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id: MONDO:0003382
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id: MONDO:0009152
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id: PBO:0061168
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id: PBO:0034724
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id: PBO:0043249
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id: GO:0034390
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id: PBO:0074232
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id: PBO:0057321
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id: GO:0045893
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id: GO:1900399
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id: MONDO:0019110
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id: FYPO:0006326
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortical nodes is decreased in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to medial cortex during vegetative growth","termid":"FYPO:0002557"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to medial cortical node","synonyms":[{"name":"decreased protein localisation to medial cortical node","type":"exact"},{"name":"decreased protein localization to cytokinetic nodes","type":"related"},{"name":"decreased protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"decreased protein recruitment to medial cortical node","type":"related"},{"name":"reduced protein localization to medial cortical node","type":"exact"}],"termid":"FYPO:0006326"}


id: PBO:0029381
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id: MONDO:1010092
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"},{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, non-human animal","secondary_identifiers":["OMIA:000038"],"termid":"MONDO:1010092","xrefs":{"Monarch":{"xref_id":"1010092"}}}


id: MONDO:0016624
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id: PBO:0029766
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id: MONDO:0037858
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id: MONDO:0006889
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which the foreskin of an uncircumcised male is retracted and cannot be pulled back over the glans penis. It results in painful swelling of the glans penis and, if is not corrected, may lead to gangrene.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phimosis","termid":"MONDO:0006904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraphimosis","secondary_identifiers":["ICD10CM:N47.2","MESH:D010263","icd11.foundation:452889019","MedDRA:10033890","DOID:5334","SCTID:13758004","UMLS:C0030483","EFO:1001086","MEDGEN:14611","NCIT:C34893"],"termid":"MONDO:0006889","xrefs":{"Monarch":{"xref_id":"0006889"}}}


id: GO:0097186
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id: GO:0071525
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrrolysine, N6-{[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine.","definition_xrefs":["PMID:17204561","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"pyrrolysine metabolic process","synonyms":[{"name":"monomethylamine methyltransferase cofactor lysine adduct metabolic process","type":"exact"},{"name":"pyrrolysine metabolism","type":"exact"}],"termid":"GO:0071525"}


id: PBO:0055105
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2523","termid":"PBO:0055105"}


id: MONDO:0020281
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metabolic disease with pigmentary retinitis (obsolete MONDO:0020281)","secondary_identifiers":["Orphanet:98713"],"termid":"MONDO:0020281","xrefs":{"Monarch":{"xref_id":"0020281"}}}


id: GO:0060338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a type I interferon-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"type I interferon-mediated signaling pathway","termid":"GO:0060337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of type I interferon-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-912694"],"synonyms":[{"name":"regulation of type I interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0060338"}


id: GO:1904610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',4,4',5-pentachlorobiphenyl stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23196670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',4,4',5-pentachlorobiphenyl","synonyms":[{"name":"response to PCB 126","type":"exact"}],"termid":"GO:1904610"}


id: GO:0042432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole metabolic process","termid":"GO:0042431"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole biosynthetic process","synonyms":[{"name":"indole anabolism","type":"exact"},{"name":"indole biosynthesis","type":"exact"},{"name":"indole formation","type":"exact"},{"name":"indole synthesis","type":"exact"}],"termid":"GO:0042432"}


id: PBO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family","termid":"PBO:0000261"}


id: GO:0050804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"modulation of chemical synaptic transmission","synonyms":[{"name":"modulation of synaptic transmission","type":"broad"},{"name":"regulation of chemical synaptic transmission","type":"exact"},{"name":"regulation of synaptic transmission","type":"exact"}],"termid":"GO:0050804"}


id: GO:0022877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + fructose(out) = protein histidine + fructose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity","synonyms":[{"name":"fructose PTS transporter activity","type":"exact"}],"termid":"GO:0022877"}


id: PBO:0069907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1198, pseudogene","termid":"PBO:0069907"}


id: PBO:0078934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 2-1","termid":"PBO:0078934"}


id: GO:0008828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dATP + H2O = dAMP + H+ + diphosphate.","definition_xrefs":["RHEA:28334","GOC:pde","PMID:11139615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0047429"],"is_obsolete":false,"name":"dATP diphosphatase activity","secondary_identifiers":["MetaCyc:RXN0-384","GO:0044713","GO:0044714","EC:3.6.1.56"],"synonyms":[{"name":"2-hydroxy-(d)ATP pyrophosphatase activity","type":"exact"},{"name":"2-hydroxy-(deoxy)adenosine-triphosphate pyrophosphatase activity","type":"exact"},{"name":"2-hydroxy-ATP pyrophosphatase activity","type":"related"},{"name":"2-hydroxy-adenosine triphosphate pyrophosphatase activity","type":"related"},{"name":"dATP pyrophosphohydrolase activity","type":"exact"}],"termid":"GO:0008828"}


id: MONDO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the spinal cord. Causes include viral infections, autoimmune disorders, vascular disorders, and toxic agents. Symptoms include weakness, paresthesia, sensory loss, pain, and incontinence.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord disorder","termid":"MONDO:0002545"},{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelitis","secondary_identifiers":["SCTID:41370002","MEDGEN:10230","icd11.foundation:1993728609","DOID:322","MESH:D009187","ICD9:323.9","UMLS:C0026975","EFO:1001472","NCIT:C26832"],"synonyms":[{"name":"inflammation of spinal cord","type":"exact"},{"name":"spinal cord inflammation","type":"exact"}],"termid":"MONDO:0002565","xrefs":{"Monarch":{"xref_id":"0002565"}}}


id: GO:1900500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of butyryl-CoA catabolic process to butyrate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"butyryl-CoA catabolic process to butyrate","termid":"GO:0044581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0006790","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"regulation of butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:1900500"}


id: FYPO:0006066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more alpha/beta tubulin heterodimers does not occur. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"abolished tubulin heterodimer binding","synonyms":[{"name":"abolished protein-protein interaction with tubulin dimer","type":"exact"},{"name":"abolished protein-protein interaction with tubulin heterodimer","type":"exact"},{"name":"abolished tubulin dimer binding","type":"exact"},{"name":"tubulin heterodimer binding abolished","type":"exact"}],"termid":"FYPO:0006066"}


id: FYPO:0000626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initiation of premeiotic DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication initiation","termid":"FYPO:0000176"},{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal initiation of premeiotic DNA replication","synonyms":[{"name":"abnormal initiation of meiotic DNA synthesis","type":"related"},{"name":"abnormal initiation of premeiotic DNA synthesis","type":"related"},{"name":"abnormal meiotic DNA replication initiation","type":"related"},{"name":"abnormal premeiotic DNA replication initiation","type":"exact"}],"termid":"FYPO:0000626"}


id: GO:0051286
data:
  {"annotated_genes":["SJAG_03608","SJAG_03353","SJAG_04462","SJAG_00652","SJAG_04258","SJAG_05290","SJAG_01448","SJAG_01993","SJAG_00185","SJAG_01290","SJAG_04620","SJAG_03119","SJAG_00514","SJAG_02087","SJAG_02202","SJAG_01288","SJAG_04050","SJAG_03581","SJAG_01898","SJAG_02716","SJAG_02968","SJAG_03646","SJAG_01437","SJAG_00700","SJAG_00137","SJAG_00993","SJAG_02368","SJAG_03453","SJAG_01268","SJAG_02379","SJAG_04706","SJAG_02566","SJAG_02169","SJAG_04781","SJAG_00870","SJAG_03444","SJAG_01373","SJAG_01071","SJAG_04522","SJAG_00030","SJAG_00331","SJAG_01384","SJAG_02241","SJAG_04901","SJAG_00101","SJAG_00397","SJAG_00216","SJAG_00140","SJAG_00805","SJAG_04167","SJAG_02004","SJAG_04315","SJAG_04322","SJAG_00424","SJAG_02333","SJAG_01114","SJAG_02916","SJAG_04982","SJAG_04566","SJAG_04828","SJAG_02718","SJAG_03748","SJAG_01697","SJAG_03536","SJAG_01660","SJAG_01718","SJAG_00667","SJAG_04455","SJAG_00845","SJAG_04980","SJAG_02924","SJAG_00264","SJAG_03643","SJAG_03753","SJAG_03754","SJAG_01171","SJAG_01943","SJAG_01215","SJAG_03229","SJAG_04591","SJAG_02062","SJAG_02581","SJAG_04724","SJAG_01353","SJAG_04624","SJAG_04723","SJAG_01453","SJAG_03486","SJAG_02331","SJAG_05285","SJAG_01888","SJAG_03126","SJAG_01003","SJAG_04479","SJAG_01894","SJAG_01095","SJAG_03606","SJAG_04960","SJAG_05001","SJAG_04637","SJAG_02320","SJAG_01799","SJAG_00162","SJAG_01794","SJAG_04666","SJAG_00589","SJAG_04012","SJAG_02700","SJAG_04509","SJAG_02511","SJAG_00236","SJAG_02338","SJAG_00596","SJAG_01855","SJAG_00368","SJAG_00546","SJAG_00445","SJAG_02152","SJAG_01189","SJAG_01885","SJAG_00434","SJAG_01017","SJAG_04935","SJAG_02838","SJAG_01732","SJAG_05264","SJAG_02486","SJAG_01983","SJAG_04765","SJAG_03655","SJAG_04268","SJAG_02045","SJAG_02797","SJAG_04668","SJAG_02412","SJAG_03915","SJAG_02222","SJAG_04100","SJAG_00724","SJAG_00280","SJAG_04058","SJAG_04931","SJAG_03432","SJAG_03246","SJAG_02258","SJAG_01360","SJAG_00677","SJAG_02943","SJAG_04358","SJAG_03375","SJAG_01196","SJAG_02576","SJAG_00575","SJAG_01787","SJAG_04771","SJAG_04051","SJAG_02277","SJAG_01631","SJAG_04776","SJAG_01388","SJAG_01754","SJAG_04044","SJAG_00521","SJAG_03086","SJAG_04001","SJAG_01118","SJAG_02278","SJAG_02380","SJAG_00268","SJAG_01835","SJAG_04878","SJAG_02132","SJAG_00610","SJAG_01770","SJAG_05198","SJAG_01167","SJAG_02695","SJAG_00018","SJAG_00938","SJAG_01978","SJAG_04905","SJAG_00152","SJAG_03011","SJAG_03625","SJAG_03380","SJAG_00279","SJAG_00028","SJAG_04595","SJAG_02392","SJAG_00851","SJAG_05179","SJAG_00587","SJAG_04703","SJAG_00104","SJAG_03746","SJAG_02729","SJAG_00333","SJAG_04829","SJAG_04690","SJAG_00661","SJAG_02957","SJAG_01350","SJAG_03172","SJAG_03705","SJAG_04787","SJAG_03379","SJAG_02989","SJAG_00800","SJAG_02166","SJAG_01738","SJAG_00317","SJAG_00063","SJAG_02104","SJAG_03145","SJAG_03637","SJAG_02753","SJAG_01345","SJAG_00773","SJAG_02602","SJAG_02228","SJAG_04673","SJAG_02760","SJAG_01964","SJAG_02351","SJAG_02322","SJAG_03331","SJAG_03938","SJAG_04609","SJAG_04887","SJAG_02657","SJAG_01456","SJAG_02684","SJAG_02075","SJAG_03596","SJAG_02114","SJAG_03357","SJAG_03760","SJAG_01925","SJAG_02572","SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87771,88308,88556,88574,88615,88939,89272,89930,90026,90145,90533,90797,90798,90799,90800,90801,90802,90803,90804,90805,91283,91479,91797,91913,92427,92506,92582,92591,92652,92860,93356,93977,94054,94706,94720,95271,95319,95572,96019,97345,97873,98551,99140,99229,99607,99910,100002,100522,100712,101240,101271,101669,101790,102067,102542,103058,103159,103628,103843,104844,104936,105046,105304,105484,105499,105667,105942,106599,106807,107013,107502,107542,108090,108376,108612,108684,109652,109692,109838,109846,110491,111697,111755,111798,111822,112003,112799,113327,113540,113773,113989,113992,114100,114158,114496,115969,116408,117060,117160,117832,118053,118657,118658,118854,119076,119116,119194,119203,119305,119549,119792,119793],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[91085,87842,88467,97179,95731,98042,110425,91159,100216,111981,104964,88781,103564,111686,113402,92222,100492,114363,96588,95685,102955,103282,107174,97289,96626,100059,102975,91696,103804,99296,108653,112191,95524,112628,88373,91387,107357,99635,99153,96162,111186,87826,94180,107333,89651,104058,93884,104007],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051285"},{"annotations":[119158,116496,114479,106423,118960,92731,91035,70552,111079,113372,112275,116134,90175,94892,88195,91064,116804,118226],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902716"},{"annotations":[101247,111080,112276,118227],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140472"},{"annotations":[106912],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106186"},{"annotations":[100081,75837,119535,94198,112495,104189,95262,119531,88785,95736,100495,119541,119539,119537,119533,116890],"is_not":false,"rel_nam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region at the end of the longest axis of a cylindrical or elongated cell.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell 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tip","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:30726171":null,"PMID:36148799":null},"synonyms":[{"name":"cell end","type":"exact"}],"termid":"GO:0051286","terms_by_termid":{"GO:0001411":null,"GO:0031520":null,"GO:0035838":null,"GO:0035839":null,"GO:0035840":null,"GO:0035841":null,"GO:0035842":null,"GO:0043332":null,"GO:0051285":null,"GO:0051286":null,"GO:0051329":null,"GO:0070867":null,"GO:0106186":null,"GO:0140472":null,"GO:1902716":null,"GO:1902929":null,"GO:1990819":null}}


id: GO:0072213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric capsule over time, from its formation to the mature structure. The metanephric capsule is the tough fibrous layer surrounding the metanephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule development","termid":"GO:0072127"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric capsule development","termid":"GO:0072213"}


id: GO:0052818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heteroglycan + GDP-mannose = (1->3)-alpha-D-mannosylheteroglycan + GDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete heteroglycan 3-alpha-mannosyltransferase activity (obsolete GO:0052818)","synonyms":[{"name":"heteropolysaccharide 3-alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0052818"}


id: PBO:0068964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 208, pseudogene","termid":"PBO:0068964"}


id: GO:0010795
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquinone biosynthesis. Ubiquinone biosynthesis consists of the chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006744"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006744","GO:0044281"],"is_obsolete":false,"name":"regulation of ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010795","terms_by_termid":{"GO:1904775":null}}


id: PBO:0068119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 426","termid":"PBO:0068119"}


id: PBO:0054886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2300","termid":"PBO:0054886"}


id: PBO:0029316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_mating_type_locus","termid":"PBO:0029316"}


id: PBO:0079423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 6","termid":"PBO:0079423"}


id: FYPO:0007142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after exposure to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability following cellular response to ionizing radiation","synonyms":[{"name":"decreased viability following cellular response to ionizing radiation","type":"exact"},{"name":"loss of cell population viability following cellular response to ionizing radiation","type":"exact"},{"name":"loss of viability following cellular response to IR","type":"exact"},{"name":"loss of viability following cellular response to gamma radiation","type":"narrow"},{"name":"loss of viability following ionizing radiation exposure","type":"exact"},{"name":"reduced viability following cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0007142"}


id: PR:P41410
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair and recombination protein RAD54-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01537","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.03c","secondary_identifiers":["UniProtKB:P41410"],"synonyms":[{"name":"RAD54 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RAD54L","type":"exact"}],"termid":"PR:P41410"}


id: PBO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 gamma subunit","termid":"PBO:0002862"}


id: PATO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001089 elasticity value (obsolete PATO:0001089)","termid":"PATO:0001089"}


id: PBO:0073608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid acetylesterase","termid":"PBO:0073608"}


id: FYPO:0007772
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119680,119681,119687,119688,119915,119922,119923,119930],"is_not":false,"summary":null,"term":"FYPO:0007772"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which reformation of the nuclear envelope after mitotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah","PMID:32109380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01745":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_05207":null},"genotype_count":5,"genotypes_by_uniquename":{"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of mitotic nuclear membrane reassembly","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_01242","SJAG_05207","SJAG_03892","SJAG_01745","SJAG_03891"],"single_locus_genotype_uniquenames":["alx1delta","cmp7delta","lem2delta","vps4delta","vps32delta"],"synonyms":[{"name":"delayed mitotic nuclear membrane reassembly","type":"exact"},{"name":"delayed onset of mitotic nuclear envelope reassembly","type":"related"},{"name":"delayed onset of mitotic nuclear membrane reassembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitotic nuclear membrane reassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007772","terms_by_termid":{"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0045717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 3 pseudogene 1","termid":"PBO:0045717"}


id: FYPO:0000238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell fails to resume growth after several days in G0 phase. The inviable cells show some features characteristic of apoptosis, including loss of DNA.","definition_xrefs":["PMID:19197239","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable cell upon G0 to G1 transition","synonyms":[{"name":"abolished mitotic competence upon G0 to G1 transition","type":"related"},{"name":"die in G0 with an apoptotic-like phenotype","type":"related"},{"name":"inviable cell upon exit from cell quiescence","type":"exact"},{"name":"inviable cell upon exit from quiescence","type":"exact"},{"name":"lethal in cell upon G0 to G1 transition","type":"exact"}],"termid":"FYPO:0000238"}


id: GO:1905606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of presynapse assembly.","definition_xrefs":["GOC:bc","GO_REF:0000058","GOC:PARL","PMID:25533483","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"regulation of presynapse organization","termid":"GO:0099174"},{"relation_name":"regulates","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of presynapse assembly","synonyms":[{"name":"regulation of presynapse biogenesis","type":"exact"},{"name":"regulation of presynaptic terminal assembly","type":"exact"}],"termid":"GO:1905606"}


id: FYPO:0005928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the polyubiquitination of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein ubiquitination during vegetative growth","termid":"FYPO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein polyubiquitination during vegetative growth","synonyms":[{"name":"abolished protein polyubiquitination during mitotic cell cycle","type":"related"},{"name":"abolished protein polyubiquitinylation during vegetative growth","type":"related"},{"name":"abolished protein polyubiquitylation during vegetative growth","type":"exact"},{"name":"protein polyubiquitination abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005928"}


id: FYPO:0001753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow normally (i.e. indistinguishably from wild type) under anaerobic conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal anaerobic cell population growth","synonyms":[{"name":"normal anaerobic growth","type":"broad"}],"termid":"FYPO:0001753"}


id: PBO:0069257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 512, pseudogene","termid":"PBO:0069257"}


id: MONDO:0010150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from any of the following anatomic sites: lip and oral cavity, nasal cavity, paranasal sinuses, pharynx, larynx, and salivary glands.","definition_xrefs":["NCIT:C34447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"head and neck squamous cell carcinoma","secondary_identifiers":["EFO:0000181","DOID:5520","MEDGEN:257911","OMIM:275355","ONCOTREE:HNSC","MedDRA:10060121","GARD:8503","SCTID:716659002","MESH:C535575","UMLS:C1168401","Orphanet:67037"],"synonyms":[{"name":"HNSCC","type":"exact"},{"name":"SCCHN","type":"exact"},{"name":"carcinoma of the head and neck","type":"narrow"},{"name":"craniocervical region squamous cell carcinoma","type":"exact"},{"name":"head and neck squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of head and neck","type":"exact"},{"name":"squamous cell carcinoma of the head and neck","type":"exact"},{"name":"squamous cell carcinoma, head and neck","type":"related"},{"name":"squamous cell carcinoma, head and neck, somatic","type":"exact"},{"name":"squamous cell carcinomas of head and neck","type":"exact"}],"termid":"MONDO:0010150","xrefs":{"Monarch":{"xref_id":"0010150"}}}


id: PBO:0054114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1479","termid":"PBO:0054114"}


id: FYPO:0000103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to copper ions. Cells stop growing (and may die) at a concentration of copper ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to copper","synonyms":[{"name":"hypersensitive to copper","type":"exact"},{"name":"sensitive to copper during mitotic cell cycle","type":"related"},{"name":"sensitive to copper during vegetative growth","type":"exact"},{"name":"sensitive to copper ions","type":"exact"}],"termid":"FYPO:0000103"}


id: PBO:0015707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated ATP-dependent RNA helicase Prp28 (predicted)","termid":"PBO:0015707"}


id: GO:0102335
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N'-diacetyl-alpha-D-bacillosaminyl-diphospho-tri-trans,hepta-cis-undecaprenol + UDP-N-acetyl-D-galactosamine = N-acetyl-D-galactosaminyl-alpha-(1->3)-N,N'-diacetyl-alpha-D-bacillosaminyl-diphospho-tri-trans,hepta-cis-undecaprenol + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N,N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13274","RHEA:34511"],"termid":"GO:0102335"}


id: PBO:0063054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase domain containing associated with muscle regeneration 1","termid":"PBO:0063054"}


id: GO:0042275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA via processes such as template switching, which does not remove the replication-blocking lesions but does not increase the endogenous mutation rate.","definition_xrefs":["GOC:elh","GOC:jl","PMID:11459630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postreplication repair","termid":"GO:0006301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"error-free postreplication DNA repair","synonyms":[{"name":"error-free PRR","type":"exact"},{"name":"error-free replication restart","type":"related"}],"termid":"GO:0042275"}


id: FYPO:0006599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006599"}


id: GO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pollen tube over time, from its initial formation to a mature structure.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube development","termid":"GO:0048868"}


id: GO:0015265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of urea through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transmembrane transporter activity","termid":"GO:0015204"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"urea channel activity","secondary_identifiers":["Reactome:R-HSA-507875","Reactome:R-HSA-507873"],"termid":"GO:0015265"}


id: MONDO:0004681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders that affect a person's ability to learn or process specific types of information which is in contrast to his/her apparent level of intellect.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"learning disability","secondary_identifiers":["SCTID:1855002","UMLS:C0751265","MESH:D007859","NCIT:C89334","DOID:8927","ICD9:315.2","MEDGEN:199623"],"synonyms":[{"name":"Academic skill disorder","type":"exact"},{"name":"learning disorder","type":"exact"}],"termid":"MONDO:0004681","xrefs":{"Monarch":{"xref_id":"0004681"}}}


id: GO:0060147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the inactivation of gene expression by a posttranscriptional mechanism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"regulates","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of post-transcriptional gene silencing","synonyms":[{"name":"regulation of posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0060147"}


id: PBO:0054658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2064","termid":"PBO:0054658"}


id: PBO:0071223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 64","termid":"PBO:0071223"}


id: PBO:0089363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase activity, implicated in cellular detoxification","termid":"PBO:0089363"}


id: MONDO:0007953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental anomaly, affecting primarily the anterior part of the maxilla and nasal complex.","definition_xrefs":["Orphanet:1248"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"nasal cavity disorder","termid":"MONDO:0002232"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Binder syndrome","secondary_identifiers":["MEDGEN:66318","DOID:14683","UMLS:C0220692","GARD:6992","OMIM:155050","SCTID:715985008","MESH:C536036"],"synonyms":[{"name":"Binder syndrome","type":"exact"},{"name":"MAXILLONASAL dysplasia, BINDER type","type":"related"},{"name":"Maxillonasal dysostosis","type":"exact"},{"name":"binder syndrome","type":"exact"},{"name":"binder type maxillonasal dysplasia","type":"exact"},{"name":"maxillonasal dysplasia","type":"related"}],"termid":"MONDO:0007953","xrefs":{"Monarch":{"xref_id":"0007953"}}}


id: PBO:0034717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine Igo1","termid":"PBO:0034717"}


id: MOD:00923
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Cy5 CyDye DIGE Fluor saturation dye","synonyms":[{"name":"Cy5 CyDye DIGE Fluor saturation dye","type":"related"},{"name":"CyDye-Cy5","type":"related"}],"termid":"MOD:00923"}


id: PBO:0081782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 709","termid":"PBO:0081782"}


id: PBO:0053078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lebercilin LCA5","termid":"PBO:0053078"}


id: GO:1905523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage migration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25749876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"positively_regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage migration","synonyms":[{"name":"activation of macrophage migration","type":"narrow"},{"name":"up regulation of macrophage migration","type":"exact"},{"name":"up-regulation of macrophage migration","type":"exact"},{"name":"upregulation of macrophage migration","type":"exact"}],"termid":"GO:1905523"}


id: GO:0035910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ascending aorta are generated and organized. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["MA:0002570","Wikipedia:Ascending_aorta","GOC:dgh","UBERON:0001496","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"ascending aorta development","termid":"GO:0035905"},{"relation_name":"part_of","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascending aorta morphogenesis","termid":"GO:0035910"}


id: PBO:0005381
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombe glycoprotease","termid":"PBO:0005381"}


id: SO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region that is prone to expansions and/or contractions.","direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_repeat","termid":"SO:0000705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_instability_region","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:repeat_instability_region","type":"exact"},{"name":"repeat instability region","type":"exact"}],"termid":"SO:0002202"}


id: PR:Q9UT25
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9.02c gene.","definition_xrefs":["UniProtKB:Q9UT25","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C9.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.02c","synonyms":[{"name":"Spom972h-SPAC9.02c","type":"exact"}],"termid":"PR:Q9UT25"}


id: PBO:0062457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 130 pseudogene","termid":"PBO:0062457"}


id: GO:1903231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A translation repressor activity that acts by base-pairing with an mRNA. The binding can result in targeting the mRNA for degradation or interfering with mRNA translation, hence resulting in posttranscriptional gene silencing.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:20533884","PMID:18197166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"},{"relation_name":"is_a","term_name":"translation repressor activity","termid":"GO:0030371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0045182","GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"mRNA base-pairing translational repressor activity","secondary_identifiers":["GO:0150100"],"synonyms":[{"name":"RNA binding involved in PTGS","type":"broad"},{"name":"RNA binding involved in cosuppression","type":"broad"},{"name":"RNA binding involved in post-transcriptional gene silencing","type":"broad"},{"name":"RNA binding involved in posttranscriptional gene silencing","type":"broad"},{"name":"RNA binding involved in quelling","type":"broad"},{"name":"mRNA base-pairing post-transcriptional repressor activity","type":"related"},{"name":"mRNA base-pairing posttranscriptional repressor activity","type":"exact"},{"name":"mRNA binding involved in PTGS","type":"exact"},{"name":"mRNA binding involved in cosuppression","type":"related"},{"name":"mRNA binding involved in post-transcriptional gene silencing","type":"exact"},{"name":"mRNA binding involved in posttranscriptional gene silencing","type":"exact"},{"name":"mRNA binding involved in quelling","type":"exact"},{"name":"mRNA binding translation repressor activity","type":"broad"},{"name":"translational inhibitor activity via mRNA base-pairing","type":"exact"}],"termid":"GO:1903231"}


id: MONDO:0000045
data:
  {"annotated_genes":["SJAG_01926"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026731"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01926":null},"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism, congenital, nongoitrous","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:275200"],"termid":"MONDO:0000045","terms_by_termid":{"MONDO:0026731":null},"xrefs":{"Monarch":{"xref_id":"0000045"}}}


id: PBO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_vegetative_cell","termid":"PBO:0030785"}


id: GO:0075278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of telium development, a process that leads to the formation of a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of telium development","termid":"GO:0075276"},{"relation_name":"negatively_regulates","term_name":"telium development","termid":"GO:0075275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of telium development","termid":"GO:0075278"}


id: PR:G2TRS5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC713.13 gene.","definition_xrefs":["UniProtKB:G2TRS5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C713.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.13","synonyms":[{"name":"Spom972h-SPBC713.13","type":"exact"}],"termid":"PR:G2TRS5"}


id: PBO:0028730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_L-ergothioneine_level","termid":"PBO:0028730"}


id: PBO:0043864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crumbs cell polarity complex component 2","termid":"PBO:0043864"}


id: GO:0085044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host organism cuticle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cuticle","synonyms":[{"name":"catabolism of host cuticle","type":"exact"},{"name":"degradation of host cuticle","type":"related"},{"name":"disassembly by symbiont of host cuticle","type":"related"}],"termid":"GO:0085044"}


id: FYPO:0003900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a triphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal triphosphatase activity","termid":"FYPO:0003899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased triphosphatase activity","synonyms":[{"name":"reduced triphosphatase activity","type":"exact"}],"termid":"FYPO:0003900"}


id: GO:0043034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.","definition_xrefs":["GOC:mtg_muscle","ISBN:0198506732","GOC:jl","PMID:6405378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"costamere","secondary_identifiers":["Wikipedia:Costamere"],"termid":"GO:0043034"}


id: PBO:0031042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_organization","termid":"PBO:0031042"}


id: MONDO:0002549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma that involves the hypoglossal nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"},{"relation_name":"is_a","term_name":"hypoglossal nerve neoplasm","termid":"MONDO:0002550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schwannoma of twelfth cranial nerve","secondary_identifiers":["MEDGEN:235581","NCIT:C5434","UMLS:C1335928","DOID:3197"],"synonyms":[{"name":"hypoglossal nerve neurilemmoma","type":"exact"},{"name":"hypoglossal nerve schwannoma","type":"exact"},{"name":"hypoglossal neurilemmoma","type":"exact"},{"name":"hypoglossal schwannoma","type":"exact"},{"name":"neurilemmoma of hypoglossal nerve","type":"exact"},{"name":"neurilemmoma of the hypoglossal nerve","type":"exact"},{"name":"neurilemmoma of the twelfth cranial nerve","type":"exact"},{"name":"neurilemmoma of twelfth cranial nerve","type":"exact"},{"name":"schwannoma of hypoglossal nerve","type":"exact"},{"name":"schwannoma of the hypoglossal nerve","type":"exact"},{"name":"schwannoma of the twelfth cranial nerve","type":"exact"},{"name":"schwannoma of twelfth cranial nerve","type":"exact"},{"name":"twelfth cranial nerve neurilemmoma","type":"exact"},{"name":"twelfth cranial nerve schwannoma","type":"exact"}],"termid":"MONDO:0002549","xrefs":{"Monarch":{"xref_id":"0002549"}}}


id: PBO:0110386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3123","termid":"PBO:0110386"}


id: GO:0016241
data:
  {"annotated_genes":["SJAG_04435","SJAG_05289","SJAG_02433","SJAG_02723","SJAG_04496","SJAG_01716","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[108978,108887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[97947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[75764,106588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[89845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macroautophagy.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_02433":null,"SJAG_02723":null,"SJAG_03851":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of starvation-induced autophagy","type":"exact"}],"termid":"GO:0016241","terms_by_termid":{"GO:0016239":null,"GO:0016242":null,"GO:0140501":null,"GO:1901098":null,"GO:2000786":null}}


id: PBO:0082118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetylglutamate synthase (glutamate N-acetyltransferase); mitochondrial enzyme that catalyzes the first step in the biosynthesis of the arginine precursor ornithine; forms a complex with Arg5,6p","termid":"PBO:0082118"}


id: GO:0043195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters. The axon terminus is considered to be the whole region of thickening and the terminal bouton is a specialized region of it.","definition_xrefs":["PMID:8409967","GOC:nln","GOC:dph","GOC:mc","PMID:10218156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynapse","termid":"GO:0098793"},{"relation_name":"part_of","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"terminal bouton","secondary_identifiers":["NIF_Subcellular:sao187426937"],"synonyms":[{"name":"bouton","type":"exact"},{"name":"presynaptic bouton","type":"exact"},{"name":"synaptic bouton","type":"exact"},{"name":"terminal button","type":"exact"}],"termid":"GO:0043195"}


id: FYPO:0001008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the actomyosin contractile ring is absent from the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"actomyosin contractile ring absent","synonyms":[{"name":"actomyosin contractile ring absent during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring absent during vegetative growth","type":"exact"},{"name":"actomyosin contractile ring absent from cell","type":"exact"},{"name":"actomyosin contractile ring actin absent","type":"narrow"},{"name":"contractile ring absent","type":"exact"},{"name":"cytokinetic contractile ring absent","type":"exact"}],"termid":"FYPO:0001008"}


id: MONDO:0005246
data:
  {"annotated_genes":["SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"}]},"cv_name":"mondo","definition":"An acute or chronic inflammation of the bone and its structures due to infection with pyogenic bacteria.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"bone inflammation disease","termid":"MONDO:0002614"},{"relation_name":"is_a","term_name":"bone marrow disorder","termid":"MONDO:0003225"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"osteomyelitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C27577","ICD9:730.11","ICD9:730.0","ICD9:730.20","MESH:D010019","ICD9:730.01","DOID:1019","EFO:0003102","ICD9:730.96","ICD9:730.97","ICD9:730.28","HP:0002754","SCTID:60168000","ICD9:730.93","ICD9:730.94","GARD:7286","ICD9:730.92","UMLS:C0029443","ICD9:730.1","ICD9:730.10","MEDGEN:10497"],"synonyms":[{"name":"osteomyelitis","type":"exact"},{"name":"osteomyelitis (disease)","type":"exact"}],"termid":"MONDO:0005246","terms_by_termid":{"MONDO:0012316":null},"xrefs":{"Monarch":{"xref_id":"0005246"}}}


id: PBO:0068698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 79, pseudogene","termid":"PBO:0068698"}


id: FYPO:0002990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of leucine into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal leucine import","termid":"FYPO:0001139"},{"relation_name":"is_a","term_name":"increased amino acid import during vegetative growth","termid":"FYPO:0003169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased leucine import","synonyms":[{"name":"increased L-leucine import across plasma membrane","type":"exact"},{"name":"increased leucine import during mitotic cell cycle","type":"related"},{"name":"increased leucine import during vegetative growth","type":"exact"},{"name":"increased leucine import into cell","type":"exact"},{"name":"increased leucine uptake","type":"exact"}],"termid":"FYPO:0002990"}


id: MONDO:0012459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 6","secondary_identifiers":["MEDGEN:377855","OMIM:610262","UMLS:C1853226"],"synonyms":[{"name":"Hyt6","type":"related"},{"name":"hypertension, essential, kidney function-related","type":"related"},{"name":"hypertension, essential, susceptibility to, 6","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 6","type":"exact"}],"termid":"MONDO:0012459","xrefs":{"Monarch":{"xref_id":"0012459"}}}


id: PBO:0064276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H2","termid":"PBO:0064276"}


id: PBO:0027018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomeric_repeat_sequence","termid":"PBO:0027018"}


id: FYPO:0003258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased amino acid import during vegetative growth","termid":"FYPO:0003169"},{"relation_name":"is_a","term_name":"abnormal proline import","termid":"FYPO:0003256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased proline import","synonyms":[{"name":"increased L-proline import","type":"narrow"},{"name":"increased L-proline import across plasma membrane","type":"exact"},{"name":"increased proline import during mitotic cell cycle","type":"related"},{"name":"increased proline import during vegetative growth","type":"exact"},{"name":"increased proline import into cell","type":"exact"},{"name":"increased proline uptake","type":"exact"}],"termid":"FYPO:0003258"}


id: MONDO:0017166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of salivary glands (obsolete MONDO:0017166)","secondary_identifiers":["Orphanet:276142"],"termid":"MONDO:0017166","xrefs":{"Monarch":{"xref_id":"0017166"}}}


id: PBO:0073929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 2","termid":"PBO:0073929"}


id: PBO:0113747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHC pseudogene 3","termid":"PBO:0113747"}


id: PBO:0090921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane mannan endo-1,6-alpha-mannosidase Dfg501","termid":"PBO:0090921"}


id: GO:0033871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3'-phosphoadenylyl sulfate + alpha-D-glucosaminyl-(heparan sulfate)(n) = 3-sulfo-alpha-D-glucosaminyl-(heparan sulfate)(n) + adenosine 3',5'-bisphosphate + H+. Modifies selected glucosamine residues preceded by GlcA2S.","definition_xrefs":["EC:2.8.2.29"],"gene_count":0,"genotype_count":0,"name":"obsolete heparan sulfate 3-sulfotransferase 2 activity (obsolete GO:0033871)","synonyms":[{"name":"[heparan sulfate]-glucosamine 3-sulfotransferase 2 activity","type":"exact"},{"name":"heparin-glucosamine 3-sulfotransferase 2 activity","type":"related"}],"termid":"GO:0033871"}


id: PBO:0082048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-O-ribose methyltransferase; methylates the 2'-O-ribose of tRNA-Phe, tRNA-Trp, and tRNA-Leu at positions C32 and N34 of tRNA anticodon loop; crucial biological role likely modification of tRNA-Phe; interacts with Trm732p and Rtt10p in 2'-O-methylation of C32 and N34 substrate tRNAs, respectively; yeast null mutant can be functionally complemented by human FTSJ1, mutations in which have been implicated in nonsyndromic X-linked intellectual disability (NSXLID)","termid":"PBO:0082048"}


id: PBO:0089860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane stretch-activated calcium ion channel Yam8","termid":"PBO:0089860"}


id: MONDO:0100331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to a nerve agent or gas.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve agent poisoning","termid":"MONDO:0100331","xrefs":{"Monarch":{"xref_id":"0100331"}}}


id: GO:0009924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: octadecanal = heptadecane + CO.","definition_xrefs":["GOC:tb","EC:4.1.99.5"],"gene_count":0,"genotype_count":0,"name":"obsolete octadecanal decarbonylase activity (obsolete GO:0009924)","synonyms":[{"name":"octadecanal alkane-lyase activity","type":"exact"}],"termid":"GO:0009924"}


id: PBO:0089926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body assembly WD repeat protein","termid":"PBO:0089926"}


id: GO:0106371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + primary fluorescent chlorophyll catabolite + reduced [NADPH--hemoprotein reductase] = formate + 2 H+ + oxidized [NADPH--hemoprotein reductase] + primary fluorescent dioxobilin-type chlorophyll catabolite.","definition_xrefs":["RHEA:67172","PMID:23723324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fluorescent chlorophyll catabolite monooxygenase (deformylase) activity","termid":"GO:0106371"}


id: PBO:0063871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C","termid":"PBO:0063871"}


id: MONDO:1012961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cancer that occurs in dogs due to a somatic mutation in the TP53 gene.","definition_xrefs":["PMID:37414794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, TP53-related, dog","secondary_identifiers":["OMIA:001990-9615"],"termid":"MONDO:1012961","xrefs":{"Monarch":{"xref_id":"1012961"}}}


id: PBO:0073485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin synthase 2","termid":"PBO:0073485"}


id: MONDO:0012328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichilemmal cyst","secondary_identifiers":["icd11.foundation:150930710","OMIM:609649","UMLS:C2266788","SCTID:254677004","MEDGEN:389216"],"synonyms":[{"name":"Pilar cyst","type":"related"},{"name":"TRICY1","type":"related"},{"name":"Tricholemmal cyst","type":"related"},{"name":"trichilemmal cyst 1","type":"related"}],"termid":"MONDO:0012328","xrefs":{"Monarch":{"xref_id":"0012328"}}}


id: MONDO:0011458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the AIPL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"AIPL1-related retinopathy","termid":"MONDO:0100438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Leber congenital amaurosis 4","secondary_identifiers":["ICD10CM:H35.5","MEDGEN:346808","GARD:9662","OMIM:604393","UMLS:C1858386","MESH:C565778","DOID:0110332"],"synonyms":[{"name":"AIPL1 Leber congenital amaurosis","type":"exact"},{"name":"LCA4","type":"exact"},{"name":"Leber congenital amaurosis 4","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in AIPL1","type":"exact"},{"name":"Leber congenital amaurosis type 4","type":"exact"},{"name":"amaurosis congenita of Leber, type 4","type":"related"},{"name":"cone-rod dystrophy","type":"broad"},{"name":"cone-rod dystrophy, Aipl1-related","type":"related"},{"name":"retinitis pigmentosa, juvenile","type":"related"},{"name":"retinitis pigmentosa, juvenile, Aipl1-related","type":"related"}],"termid":"MONDO:0011458","xrefs":{"Monarch":{"xref_id":"0011458"}}}


id: GO:1903741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["GOC:rn","GOC:TermGenie","GO_REF:0000059","PMID:22334681"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidate phosphatase activity (obsolete GO:1903741)","synonyms":[{"name":"down regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"down regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"down regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"down regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"down regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"down-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"down-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"downregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"downregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"downregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"downregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"downregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"downregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"downregulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"inhibition of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatic acid phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"inhibition of phosphatidate phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"negative regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"negative regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"negative regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"negative regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903741"}


id: MONDO:0009069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Saguenay-Lac-St. Jean (SLSJ) type congenital lactic acidosis, a French Canadian form of Leigh syndrome, is a mitochondrial disease characterized by chronic metabolic acidosis, hypotonia, facial dysmorphism and delayed development.","definition_xrefs":["Orphanet:70472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"Leigh syndrome","termid":"MONDO:0009723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005244","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"congenital lactic acidosis, Saguenay-Lac-Saint-Jean type","secondary_identifiers":["OMIM:220111","SCTID:718219002","UMLS:C1857355","MESH:C537004","MEDGEN:387801","DOID:0111180","GARD:8370"],"synonyms":[{"name":"COX deficiency, French-Canadian type","type":"exact"},{"name":"Cox deficiency, French Canadian type","type":"related"},{"name":"Cox deficiency, Saguenay Lac saint Jean type","type":"related"},{"name":"Cox deficiency, Saguenay-Lac-Saint-Jean type","type":"related"},{"name":"LSFC","type":"related"},{"name":"Leigh syndrome, French Canadian type","type":"related"},{"name":"Leigh syndrome, French-Canadian type","type":"exact"},{"name":"Leigh syndrome, Saguenay Lac saint Jean type","type":"related"},{"name":"Leigh syndrome, Saguenay-Lac-Saint-Jean type","type":"exact"},{"name":"SLSJ-COX deficiency","type":"exact"},{"name":"congenital lactic acidosis, Saguenay-Lac-Saint-Jean type","type":"exact"},{"name":"cytochrome C oxidase deficiency, French Canadian type","type":"related"},{"name":"cytochrome C oxidase deficiency, French-Canadian type","type":"exact"},{"name":"cytochrome oxidase deficiency, Saguenay-Lac-Saint-Jean type","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 5, (French-Canadian)","type":"exact"}],"termid":"MONDO:0009069","xrefs":{"Monarch":{"xref_id":"0009069"}}}


id: GO:0045901
data:
  {"annotated_genes":["SJAG_02812","SJAG_02189"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66588,68825],"is_not":false,"summary":null,"term":"GO:0045901"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translational elongation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"positively_regulates","term_name":"translational elongation","termid":"GO:0006414"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translational elongation","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of translational elongation","type":"narrow"},{"name":"stimulation of translational elongation","type":"narrow"},{"name":"up regulation of translational elongation","type":"exact"},{"name":"up-regulation of translational elongation","type":"exact"},{"name":"upregulation of translational elongation","type":"exact"}],"termid":"GO:0045901","terms_by_termid":{"GO:0045901":null}}


id: MONDO:0030689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, demyelinating, IIA 1H","secondary_identifiers":["OMIM:619764","UMLS:C5676926","MEDGEN:1804752"],"synonyms":[{"name":"CMT1H","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, IIA 1H","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, IIA 1H","type":"exact"},{"name":"hereditary motor and sensory neuropathy, 1h","type":"exact"},{"name":"neuropathy, hereditary, with or without age-related macular degeneration","type":"exact"}],"termid":"MONDO:0030689","xrefs":{"Monarch":{"xref_id":"0030689"}}}


id: GO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glycine + ascorbate + O2 = peptidyl(2-hydroxyglycine) + dehydroascorbate + H2O.","definition_xrefs":["EC:1.14.17.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"peptidylglycine monooxygenase activity","secondary_identifiers":["MetaCyc:PEPTIDYLGLYCINE-MONOOXYGENASE-RXN","RHEA:21452"],"synonyms":[{"name":"PAM activity","type":"related"},{"name":"PAM-A","type":"related"},{"name":"PAM-B","type":"related"},{"name":"peptide alpha-amidating enzyme","type":"related"},{"name":"peptide alpha-amide synthase activity","type":"related"},{"name":"peptide-alpha-amide synthetase activity","type":"related"},{"name":"peptidyl alpha-amidating enzyme activity","type":"related"},{"name":"peptidylglycine 2-hydroxylase activity","type":"exact"},{"name":"peptidylglycine alpha-amidating monooxygenase activity","type":"related"},{"name":"peptidylglycine alpha-hydroxylase activity","type":"related"},{"name":"peptidylglycine,ascorbate:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"synthase, peptide alpha-amide","type":"related"}],"termid":"GO:0004504"}


id: MONDO:1012221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic hepatic encephalopathy, non-human animal","termid":"MONDO:1011777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic hepatic encephalopathy, dog","secondary_identifiers":["OMIA:000816-9615"],"termid":"MONDO:1012221","xrefs":{"Monarch":{"xref_id":"1012221"}}}


id: GO:0045505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an intermediate chain of the dynein complex.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dynein intermediate chain binding","termid":"GO:0045505"}


id: GO:0019656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the enzymatic breakdown of D-glucose to D-lactate and ethanol, yielding energy in the form of adenosine triphosphate (ATP) at the rate of one ATP per glucose molecule.","definition_xrefs":["GOC:jl","MetaCyc:P122-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"glucose catabolic process to lactate","termid":"GO:0019659"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"glucose catabolic process to D-lactate and ethanol","synonyms":[{"name":"glucose fermentation to D-lactate and ethanol","type":"exact"},{"name":"heterofermentation","type":"exact"},{"name":"heterofermentative lactate fermentation","type":"exact"},{"name":"heterofermentative pathway","type":"exact"},{"name":"heterolactate fermentation","type":"exact"},{"name":"heterolactic fermentation","type":"exact"}],"termid":"GO:0019656"}


