# genes

id: SJAG_00128
data:
  {"cv_annotations":{"biological_process":[{"annotations":[93678],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[93675],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[80483],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[69835],"is_not":false,"summary":null,"term":"GO:0019774"}],"molecular_function":[{"annotations":[93679],"is_not":false,"summary":null,"term":"GO:0004175"}],"mondo":[{"annotations":[86061],"is_not":false,"summary":null,"term":"MONDO:0859287"}]},"dbxrefs":["InterPro:IPR023333","UniProtKB/TrEMBL:B6JXI7","InterPro:IPR016050","GOA:B6JXI7","EnsemblGenomes-Gn:SJAG_00128","InterPro:IPR029055","InterPro:IPR035202","EnsemblGenomes-Tr:EEB05131","InterPro:IPR001353"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pgm2","uniquename":"SJAG_00134"},{"name":"atp5","uniquename":"SJAG_00133"},{"uniquename":"SJAG_00132"},{"name":"pdi5","uniquename":"SJAG_00131"},{"uniquename":"SJAG_00129"},{"name":"pam1","uniquename":"SJAG_00128"},{"uniquename":"SJAG_00127"},{"name":"ecm29","uniquename":"SJAG_00126"},{"name":"sdu1","uniquename":"SJAG_00125"},{"uniquename":"SJAG_00124"},{"uniquename":"SJAG_00121"}],"genes_by_uniquename":{"HGNC:9537":null,"SJAG_00128":null,"SPAC22F8.06":null,"YBL041W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Proteasome subunit","id":"PF00227","interpro_description":"Proteasome, subunit alpha/beta","interpro_id":"IPR001353","interpro_name":"Proteasome_sua/b","locations":[{"end":157,"start":10}],"match_end":157,"match_start":10,"name":"Proteasome"},{"dbname":"PROSITE_PATTERNS","description":"Proteasome beta-type subunits signature.","id":"PS00854","interpro_description":"Proteasome beta-type subunit, conserved site","interpro_id":"IPR016050","interpro_name":"Proteasome_bsu_CS","locations":[{"end":64,"start":17}],"match_end":64,"match_start":17,"name":"PROTEASOME_BETA_1"},{"dbname":"PROSITE_PROFILES","description":"Proteasome beta-type subunit profile.","id":"PS51476","interpro_description":"Proteasome B-type subunit","interpro_id":"IPR023333","interpro_name":"Proteasome_suB-type","locations":[{"end":193,"start":13}],"match_end":193,"match_start":13,"name":"PROTEASOME_BETA_2"},{"dbname":"FUNFAM","description":"Proteasome subunit beta type-6","id":"G3DSA:3.60.20.10:FF:000027","locations":[{"end":193,"start":5}],"match_end":193,"match_start":5},{"dbname":"SUPERFAMILY","id":"SSF56235","interpro_description":"Nucleophile aminohydrolases, N-terminal","interpro_id":"IPR029055","interpro_name":"Ntn_hydrolases_N","locations":[{"end":192,"start":8}],"match_end":192,"match_start":8,"name":"N-terminal nucleophile aminohydrolases (Ntn hydrolases)"},{"dbname":"GENE3D","id":"G3DSA:3.60.20.10","interpro_description":"Nucleophile aminohydrolases, N-terminal","interpro_id":"IPR029055","interpro_name":"Ntn_hydrolases_N","locations":[{"end":193,"start":5}],"match_end":193,"match_start":5,"name":"Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"},{"dbname":"PANTHER","id":"PTHR32194","interpro_description":"Proteasome B-type subunit","interpro_id":"IPR023333","interpro_name":"Proteasome_suB-type","locations":[{"end":192,"start":3}],"match_end":192,"match_start":3,"name":"METALLOPROTEASE TLDD"}],"location":{"chromosome_name":"supercont5.1","end_pos":4000256,"start_pos":3999646,"strand":"forward"},"name":"pam1","ortholog_annotations":[{"gene_uniquename":"SJAG_00128","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9537","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00128","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22F8.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00128","ortholog_taxonid":4932,"ortholog_uniquename":"YBL041W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00128","ortholog_taxonid":4932,"ortholog_uniquename":"YBL041W","reference_uniquename":"PMID:26896847"}],"product":"20S proteasome complex subunit beta 6 Pam1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004175"]}},"subset_termids":["GO:0005634","GO:0008233","GO:0005829","MONDO:0700092","GO:0030163","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004175":null,"GO:0005634":null,"GO:0005829":null,"GO:0019774":null,"GO:0043161":null,"MONDO:0859287":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00128.1"],"transcripts_by_uniquename":{"SJAG_00128.1":null},"uniprot_identifier":"B6JXI7","uniquename":"SJAG_00128"}


id: SJAG_00129
data:
  {"cv_annotations":{"biological_process":[{"annotations":[68780],"is_not":false,"summary":null,"term":"GO:0005992"}],"cellular_component":[{"annotations":[79674],"is_not":false,"summary":null,"term":"GO:0005946"},{"annotations":[93672],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[93674],"is_not":false,"summary":null,"term":"GO:0003825"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05132","InterPro:IPR003337","InterPro:IPR023214","InterPro:IPR036412","UniProtKB/TrEMBL:B6JXI8","EnsemblGenomes-Gn:SJAG_00129","InterPro:IPR001830","GOA:B6JXI8"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":148,"start":108}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pca1","uniquename":"SJAG_00135"},{"name":"pgm2","uniquename":"SJAG_00134"},{"name":"atp5","uniquename":"SJAG_00133"},{"uniquename":"SJAG_00132"},{"name":"pdi5","uniquename":"SJAG_00131"},{"uniquename":"SJAG_00129"},{"name":"pam1","uniquename":"SJAG_00128"},{"uniquename":"SJAG_00127"},{"name":"ecm29","uniquename":"SJAG_00126"},{"name":"sdu1","uniquename":"SJAG_00125"},{"uniquename":"SJAG_00124"}],"genes_by_uniquename":{"SJAG_00129":null,"SPAC22F8.05":null,"YML100W":null,"YMR261C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Trehalose-phosphatase","id":"PF02358","interpro_description":"Trehalose-phosphatase","interpro_id":"IPR003337","interpro_name":"Trehalose_PPase","locations":[{"end":887,"start":657}],"match_end":887,"match_start":657,"name":"Trehalose_PPase"},{"dbname":"PFAM","description":"Glycosyltransferase family 20","id":"PF00982","interpro_description":"Glycosyl transferase, family 20","interpro_id":"IPR001830","interpro_name":"Glyco_trans_20","locations":[{"end":622,"start":169}],"match_end":622,"match_start":169,"name":"Glyco_transf_20"},{"dbname":"CDD","description":"GT20_TPS","id":"cd03788","interpro_description":"Glycosyl transferase, family 20","interpro_id":"IPR001830","interpro_name":"Glyco_trans_20","locations":[{"end":622,"start":181}],"match_end":622,"match_start":181,"name":"GT20_TPS"},{"dbname":"FUNFAM","description":"Alpha,alpha-trehalose phosphate synthase subunit, putative","id":"G3DSA:3.40.50.2000:FF:000099","locations":[{"end":407,"start":155}],"match_end":407,"match_start":155},{"dbname":"FUNFAM","description":"Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1","id":"G3DSA:3.30.70.1020:FF:000001","locations":[{"end":824,"start":745}],"match_end":824,"match_start":745},{"dbname":"SUPERFAMILY","id":"SSF56784","interpro_description":"HAD-like superfamily","interpro_id":"IPR036412","interpro_name":"HAD-like_sf","locations":[{"end":903,"start":654}],"match_end":903,"match_start":654,"name":"HAD-like"},{"dbname":"SUPERFAMILY","id":"SSF53756","locations":[{"end":623,"start":180}],"match_end":623,"match_start":180,"name":"UDP-Glycosyltransferase/glycogen phosphorylase"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.2000","locations":[{"end":606,"start":162}],"match_end":606,"match_start":162,"name":"Glycogen Phosphorylase B;"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.1020","locations":[{"end":824,"start":745}],"match_end":824,"match_start":745},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1000","interpro_description":"HAD superfamily","interpro_id":"IPR023214","interpro_name":"HAD_sf","locations":[{"end":744,"start":657},{"end":886,"start":825}],"match_end":886,"match_start":657},{"dbname":"PANTHER","id":"PTHR10788","interpro_description":"Glycosyl transferase, family 20","interpro_id":"IPR001830","interpro_name":"Glyco_trans_20","locations":[{"end":900,"start":161}],"match_end":900,"match_start":161,"name":"TREHALOSE-6-PHOSPHATE SYNTHASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":148,"start":108}],"match_end":148,"match_start":108,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":141,"start":120}],"match_end":141,"match_start":120,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3999176,"start_pos":3996462,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00129","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22F8.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00129","ortholog_taxonid":4932,"ortholog_uniquename":"YML100W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00129","ortholog_taxonid":4932,"ortholog_uniquename":"YML100W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00129","ortholog_taxonid":4932,"ortholog_uniquename":"YMR261C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00129","ortholog_taxonid":4932,"ortholog_uniquename":"YMR261C","reference_uniquename":"PMID:26896847"}],"product":"alpha,alpha-trehalose-phosphate synthase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003825"]}},"subset_termids":["GO:0005975","GO:0016757","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003825":null,"GO:0005829":null,"GO:0005946":null,"GO:0005992":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00129.1"],"transcripts_by_uniquename":{"SJAG_00129.1":null},"uniprot_identifier":"B6JXI8","uniquename":"SJAG_00129"}


id: SJAG_00131
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":600,"start":24}}],"cv_annotations":{"biological_process":[{"annotations":[116186],"is_not":false,"summary":null,"term":"GO:0036503"}],"cellular_component":[{"annotations":[116184],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[116185],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[116187],"is_not":false,"summary":null,"term":"GO:0003756"}],"sequence":[{"annotations":[81005],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["InterPro:IPR013766","EnsemblGenomes-Tr:EEB05133","EnsemblGenomes-Gn:SJAG_00131","InterPro:IPR036249","UniProtKB/TrEMBL:B6JXI9","GOA:B6JXI9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vma2","uniquename":"SJAG_00136"},{"name":"pca1","uniquename":"SJAG_00135"},{"name":"pgm2","uniquename":"SJAG_00134"},{"name":"atp5","uniquename":"SJAG_00133"},{"uniquename":"SJAG_00132"},{"name":"pdi5","uniquename":"SJAG_00131"},{"uniquename":"SJAG_00129"},{"name":"pam1","uniquename":"SJAG_00128"},{"uniquename":"SJAG_00127"},{"name":"ecm29","uniquename":"SJAG_00126"},{"name":"sdu1","uniquename":"SJAG_00125"}],"genes_by_uniquename":{"SJAG_00131":null,"SPCC1840.08c":null,"YIL005W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Thioredoxin","id":"PF00085","interpro_description":"Thioredoxin domain","interpro_id":"IPR013766","interpro_name":"Thioredoxin_domain","locations":[{"end":241,"start":165}],"match_end":241,"match_start":165,"name":"Thioredoxin"},{"dbname":"CDD","description":"PDI_a_family","id":"cd02961","locations":[{"end":226,"start":142}],"match_end":226,"match_start":142,"name":"PDI_a_family"},{"dbname":"SUPERFAMILY","id":"SSF52833","interpro_description":"Thioredoxin-like superfamily","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like_sf","locations":[{"end":225,"start":148}],"match_end":225,"match_start":148,"name":"Thioredoxin-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.30.10","locations":[{"end":246,"start":123}],"match_end":246,"match_start":123,"name":"Glutaredoxin"},{"dbname":"PANTHER","id":"PTHR46426","interpro_description":"Protein disulfide-isomerase TMX3","interpro_id":"IPR052250","interpro_name":"PDI_TMX3","locations":[{"end":519,"start":166}],"match_end":519,"match_start":166,"name":"PROTEIN DISULFIDE-ISOMERASE TMX3"}],"location":{"chromosome_name":"supercont5.1","end_pos":3994944,"start_pos":3993142,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":69,"start":60}},{"range":{"end":577,"start":553}}],"name":"pdi5","ortholog_annotations":[{"gene_uniquename":"SJAG_00131","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1840.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00131","ortholog_taxonid":4932,"ortholog_uniquename":"YIL005W","reference_uniquename":"PMID:29761456"}],"product":"protein disulfide isomerase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":23,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003756"]}},"subset_termids":["GO:0016853","GO:0140096","GO:0005794","GO:0030163","GO:0005789","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003756":null,"GO:0005789":null,"GO:0005794":null,"GO:0036503":null,"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":578,"start":556}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00131.1"],"transcripts_by_uniquename":{"SJAG_00131.1":null},"uniprot_identifier":"B6JXI9","uniquename":"SJAG_00131"}


id: SJAG_00132
data:
  {"cv_annotations":{"biological_process":[{"annotations":[116180],"is_not":false,"summary":null,"term":"GO:0006112"},{"annotations":[116181],"is_not":false,"summary":null,"term":"GO:0006798"}],"cellular_component":[{"annotations":[116178],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[116179],"is_not":false,"summary":null,"term":"GO:0000328"}],"molecular_function":[{"annotations":[116182],"is_not":false,"summary":null,"term":"GO:0000298"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05134","UniProtKB/TrEMBL:B6JXJ0","InterPro:IPR004843","EnsemblGenomes-Gn:SJAG_00132","GOA:B6JXJ0","InterPro:IPR029052"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ypp1","uniquename":"SJAG_00137"},{"name":"vma2","uniquename":"SJAG_00136"},{"name":"pca1","uniquename":"SJAG_00135"},{"name":"pgm2","uniquename":"SJAG_00134"},{"name":"atp5","uniquename":"SJAG_00133"},{"uniquename":"SJAG_00132"},{"name":"pdi5","uniquename":"SJAG_00131"},{"uniquename":"SJAG_00129"},{"name":"pam1","uniquename":"SJAG_00128"},{"uniquename":"SJAG_00127"},{"name":"ecm29","uniquename":"SJAG_00126"}],"genes_by_uniquename":{"SJAG_00132":null,"SPCC1840.07c":null,"YNL217W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Calcineurin-like phosphoesterase","id":"PF00149","interpro_description":"Calcineurin-like phosphoesterase domain, ApaH type","interpro_id":"IPR004843","interpro_name":"Calcineurin-like_PHP_ApaH","locations":[{"end":285,"start":63}],"match_end":285,"match_start":63,"name":"Metallophos"},{"dbname":"SUPERFAMILY","id":"SSF56300","interpro_description":"Metallo-dependent phosphatase-like","interpro_id":"IPR029052","interpro_name":"Metallo-depent_PP-like","locations":[{"end":318,"start":63}],"match_end":318,"match_start":63,"name":"Metallo-dependent phosphatases"},{"dbname":"GENE3D","id":"G3DSA:3.60.21.10","interpro_description":"Metallo-dependent phosphatase-like","interpro_id":"IPR029052","interpro_name":"Metallo-depent_PP-like","locations":[{"end":336,"start":29}],"match_end":336,"match_start":29},{"dbname":"PANTHER","id":"PTHR46546","locations":[{"end":163,"start":6}],"match_end":163,"match_start":6,"name":"SHEWANELLA-LIKE PROTEIN PHOSPHATASE 1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3992797,"start_pos":3991693,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00132","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1840.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00132","ortholog_taxonid":4932,"ortholog_uniquename":"YNL217W","reference_uniquename":"PMID:29761456"}],"product":"vacuolar endopolyphosphatase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0000298"]}},"subset_termids":["GO:0005773","GO:0006091","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000298":null,"GO:0000328":null,"GO:0005783":null,"GO:0006112":null,"GO:0006798":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":26,"start":4}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00132.1"],"transcripts_by_uniquename":{"SJAG_00132.1":null},"uniprot_identifier":"B6JXJ0","uniquename":"SJAG_00132"}


id: SJAG_00133
data:
  {"cv_annotations":{"biological_process":[{"annotations":[116174],"is_not":false,"summary":null,"term":"GO:0042776"},{"annotations":[68639],"is_not":false,"summary":null,"term":"GO:1902600"}],"cellular_component":[{"annotations":[116172],"is_not":false,"summary":null,"term":"GO:0099617"},{"annotations":[116173],"is_not":false,"summary":null,"term":"GO:0045259"}],"molecular_function":[{"annotations":[79540],"is_not":false,"summary":null,"term":"GO:0046933"},{"annotations":[116177],"is_not":false,"summary":null,"term":"GO:0005198"}],"mondo":[{"annotations":[86874],"is_not":false,"summary":null,"term":"MONDO:0957255"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05135","InterPro:IPR026015","GOA:B6JXJ1","EnsemblGenomes-Gn:SJAG_00133","InterPro:IPR000711","UniProtKB/TrEMBL:B6JXJ1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00138"},{"name":"ypp1","uniquename":"SJAG_00137"},{"name":"vma2","uniquename":"SJAG_00136"},{"name":"pca1","uniquename":"SJAG_00135"},{"name":"pgm2","uniquename":"SJAG_00134"},{"name":"atp5","uniquename":"SJAG_00133"},{"uniquename":"SJAG_00132"},{"name":"pdi5","uniquename":"SJAG_00131"},{"uniquename":"SJAG_00129"},{"name":"pam1","uniquename":"SJAG_00128"},{"uniquename":"SJAG_00127"}],"genes_by_uniquename":{"HGNC:850":null,"SJAG_00133":null,"SPCC1840.06":null,"YDR298C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ATP synthase delta (OSCP) subunit","id":"PF00213","interpro_description":"ATPase, OSCP/delta subunit","interpro_id":"IPR000711","interpro_name":"ATPase_OSCP/dsu","locations":[{"end":214,"start":44}],"match_end":214,"match_start":44,"name":"OSCP"},{"dbname":"PRINTS","description":"ATP synthase delta subunit signature","id":"PR00125","interpro_description":"ATPase, OSCP/delta subunit","interpro_id":"IPR000711","interpro_name":"ATPase_OSCP/dsu","locations":[{"end":61,"start":42},{"end":136,"start":111},{"end":207,"start":174}],"match_end":207,"match_start":42,"name":"ATPASEDELTA"},{"dbname":"SUPERFAMILY","id":"SSF47928","interpro_description":"F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily","interpro_id":"IPR026015","interpro_name":"ATP_synth_OSCP/delta_N_sf","locations":[{"end":142,"start":38}],"match_end":142,"match_start":38,"name":"N-terminal domain of the delta subunit of the F1F0-ATP synthase"},{"dbname":"GENE3D","id":"G3DSA:1.10.520.20","interpro_description":"F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily","interpro_id":"IPR026015","interpro_name":"ATP_synth_OSCP/delta_N_sf","locations":[{"end":134,"start":41}],"match_end":134,"match_start":41},{"dbname":"PANTHER","id":"PTHR11910","interpro_description":"ATPase, OSCP/delta subunit","interpro_id":"IPR000711","interpro_name":"ATPase_OSCP/dsu","locations":[{"end":216,"start":28}],"match_end":216,"match_start":28,"name":"ATP SYNTHASE DELTA CHAIN"},{"dbname":"HAMAP","description":"ATP synthase subunit delta [atpD].","id":"MF_01416","interpro_description":"ATPase, OSCP/delta subunit","interpro_id":"IPR000711","interpro_name":"ATPase_OSCP/dsu","locations":[{"end":216,"start":38}],"match_end":216,"match_start":38,"name":"ATP_synth_delta_bact"},{"dbname":"NCBIFAM","description":"ATP synthase F1 subunit delta","id":"TIGR01145","interpro_description":"ATPase, OSCP/delta subunit","interpro_id":"IPR000711","interpro_name":"ATPase_OSCP/dsu","locations":[{"end":214,"start":45}],"match_end":214,"match_start":45,"name":"ATP_synt_delta"},{"dbname":"NCBIFAM","description":"F0F1 ATP synthase subunit delta","id":"NF004402","locations":[{"end":215,"start":46}],"match_end":215,"match_start":46,"name":"PRK05758.2-2"}],"location":{"chromosome_name":"supercont5.1","end_pos":3991353,"start_pos":3990590,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":151,"start":143}}],"name":"atp5","ortholog_annotations":[{"gene_uniquename":"SJAG_00133","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:850","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00133","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1840.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00133","ortholog_taxonid":4932,"ortholog_uniquename":"YDR298C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00133","ortholog_taxonid":4932,"ortholog_uniquename":"YDR298C","reference_uniquename":"PMID:26896847"}],"product":"F1-FO ATP synthase peripheral stalk subunit OSCP Atp5","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0046933","GO:0005198"]}},"subset_termids":["GO:0022857","GO:0006091","GO:0005198","GO:0016874","GO:0055086","GO:0055085","GO:0005739","MONDO:0005066","MONDO:0004069"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005198":null,"GO:0042776":null,"GO:0045259":null,"GO:0046933":null,"GO:0099617":null,"GO:1902600":null,"MONDO:0957255":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00133.1"],"transcripts_by_uniquename":{"SJAG_00133.1":null},"uniprot_identifier":"B6JXJ1","uniquename":"SJAG_00133"}


id: SJAG_00134
data:
  {"cv_annotations":{"biological_process":[{"annotations":[116167],"is_not":false,"summary":null,"term":"GO:0006006"},{"annotations":[73829],"is_not":false,"summary":null,"term":"GO:0006166"}],"cellular_component":[{"annotations":[116165],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[116166],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[61385],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[116170],"is_not":false,"summary":null,"term":"GO:0004614"},{"annotations":[73828],"is_not":false,"summary":null,"term":"GO:0008973"}],"mondo":[{"annotations":[85943],"is_not":false,"summary":null,"term":"MONDO:0859347"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JXJ2","GOA:B6JXJ2","InterPro:IPR005846","EnsemblGenomes-Tr:EEB05136","EnsemblGenomes-Gn:SJAG_00134","InterPro:IPR016055","InterPro:IPR036900","InterPro:IPR005841","InterPro:IPR005844","InterPro:IPR005845","InterPro:IPR016066"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tpr1","uniquename":"SJAG_00139"},{"uniquename":"SJAG_00138"},{"name":"ypp1","uniquename":"SJAG_00137"},{"name":"vma2","uniquename":"SJAG_00136"},{"name":"pca1","uniquename":"SJAG_00135"},{"name":"pgm2","uniquename":"SJAG_00134"},{"name":"atp5","uniquename":"SJAG_00133"},{"uniquename":"SJAG_00132"},{"name":"pdi5","uniquename":"SJAG_00131"},{"uniquename":"SJAG_00129"},{"name":"pam1","uniquename":"SJAG_00128"}],"genes_by_uniquename":{"HGNC:20898":null,"HGNC:8906":null,"SJAG_00134":null,"SPCC1840.05c":null,"YMR278W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II","id":"PF02879","interpro_description":"Alpha-D-phosphohexomutase, alpha/beta/alpha domain II","interpro_id":"IPR005845","interpro_name":"A-D-PHexomutase_a/b/a-II","locations":[{"end":317,"start":221}],"match_end":317,"match_start":221,"name":"PGM_PMM_II"},{"dbname":"PFAM","description":"Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III","id":"PF02880","interpro_description":"Alpha-D-phosphohexomutase, alpha/beta/alpha domain III","interpro_id":"IPR005846","interpro_name":"A-D-PHexomutase_a/b/a-III","locations":[{"end":452,"start":327}],"match_end":452,"match_start":327,"name":"PGM_PMM_III"},{"dbname":"PFAM","description":"Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I","id":"PF02878","interpro_description":"Alpha-D-phosphohexomutase, alpha/beta/alpha domain I","interpro_id":"IPR005844","interpro_name":"A-D-PHexomutase_a/b/a-I","locations":[{"end":183,"start":45}],"match_end":183,"match_start":45,"name":"PGM_PMM_I"},{"dbname":"CDD","description":"PGM2","id":"cd05799","locations":[{"end":570,"start":44}],"match_end":570,"match_start":44,"name":"PGM2"},{"dbname":"PROSITE_PATTERNS","description":"Phosphoglucomutase and phosphomannomutase phosphoserine signature.","id":"PS00710","interpro_description":"Alpha-D-phosphohexomutase, conserved site","interpro_id":"IPR016066","interpro_name":"A-D-PHexomutase_CS","locations":[{"end":152,"start":143}],"match_end":152,"match_start":143,"name":"PGM_PMM"},{"dbname":"PRINTS","description":"Phosphoglucomutase/phosphomannomutase family signature","id":"PR00509","interpro_description":"Alpha-D-phosphohexomutase superfamily","interpro_id":"IPR005841","interpro_name":"Alpha-D-phosphohexomutase_SF","locations":[{"end":156,"start":142},{"end":250,"start":231},{"end":314,"start":299}],"match_end":314,"match_start":142,"name":"PGMPMM"},{"dbname":"FUNFAM","description":"Pgm3p","id":"G3DSA:3.40.120.10:FF:000035","locations":[{"end":192,"start":21}],"match_end":192,"match_start":21},{"dbname":"SUPERFAMILY","id":"SSF55957","interpro_description":"Alpha-D-phosphohexomutase, C-terminal domain superfamily","interpro_id":"IPR036900","interpro_name":"A-D-PHexomutase_C_sf","locations":[{"end":574,"start":521}],"match_end":574,"match_start":521,"name":"Phosphoglucomutase, C-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF53738","interpro_description":"Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III","interpro_id":"IPR016055","interpro_name":"A-D-PHexomutase_a/b/a-I/II/III","locations":[{"end":217,"start":35},{"end":454,"start":220}],"match_end":454,"match_start":35,"name":"Phosphoglucomutase, first 3 domains"},{"dbname":"GENE3D","id":"G3DSA:3.40.120.10","locations":[{"end":219,"start":25},{"end":318,"start":234},{"end":453,"start":324}],"match_end":453,"match_start":25},{"dbname":"GENE3D","id":"G3DSA:3.30.310.50","locations":[{"end":572,"start":488}],"match_end":572,"match_start":488},{"dbname":"PANTHER","id":"PTHR45745","locations":[{"end":586,"start":1}],"match_end":586,"match_start":1,"name":"PHOSPHOMANNOMUTASE 45A"}],"location":{"chromosome_name":"supercont5.1","end_pos":3989751,"start_pos":3987988,"strand":"reverse"},"name":"pgm2","ortholog_annotations":[{"gene_uniquename":"SJAG_00134","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20898","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00134","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8906","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00134","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1840.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00134","ortholog_taxonid":4932,"ortholog_uniquename":"YMR278W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00134","ortholog_taxonid":4932,"ortholog_uniquename":"YMR278W","reference_uniquename":"PMID:26896847"}],"product":"phosphoglucomutase Pgm2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000287"],"not-binding":["GO:0008973","GO:0004614"]}},"subset_termids":["GO:0016853","GO:0055086","GO:0005829","GO:0005634","MONDO:0700092","GO:0005975"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000287":null,"GO:0004614":null,"GO:0005634":null,"GO:0005829":null,"GO:0006006":null,"GO:0006166":null,"GO:0008973":null,"MONDO:0859347":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00134.1"],"transcripts_by_uniquename":{"SJAG_00134.1":null},"uniprot_identifier":"B6JXJ2","uniquename":"SJAG_00134"}


id: SJAG_00135
data:
  {"cv_annotations":{"biological_process":[{"annotations":[116163],"is_not":false,"summary":null,"term":"GO:0006515"}],"cellular_component":[{"annotations":[116161],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[116162],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[74558],"is_not":false,"summary":null,"term":"GO:0004197"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05137","EnsemblGenomes-Gn:SJAG_00135","GOA:B6JXJ3","InterPro:IPR029030","UniProtKB/TrEMBL:B6JXJ3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":124,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ssm4","uniquename":"SJAG_00140"},{"name":"tpr1","uniquename":"SJAG_00139"},{"uniquename":"SJAG_00138"},{"name":"ypp1","uniquename":"SJAG_00137"},{"name":"vma2","uniquename":"SJAG_00136"},{"name":"pca1","uniquename":"SJAG_00135"},{"name":"pgm2","uniquename":"SJAG_00134"},{"name":"atp5","uniquename":"SJAG_00133"},{"uniquename":"SJAG_00132"},{"name":"pdi5","uniquename":"SJAG_00131"},{"uniquename":"SJAG_00129"}],"genes_by_uniquename":{"SJAG_00135":null,"SPCC1840.04":null,"YOR197W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Caspase domain","id":"PF00656","interpro_description":"Peptidase C14, caspase domain","interpro_id":"IPR011600","interpro_name":"Pept_C14_caspase","locations":[{"end":424,"start":138}],"match_end":424,"match_start":138,"name":"Peptidase_C14"},{"dbname":"SUPERFAMILY","id":"SSF52129","interpro_description":"Caspase-like domain superfamily","interpro_id":"IPR029030","interpro_name":"Caspase-like_dom_sf","locations":[{"end":288,"start":134},{"end":409,"start":350}],"match_end":409,"match_start":134,"name":"Caspase-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.12660","locations":[{"end":310,"start":113},{"end":433,"start":322}],"match_end":433,"match_start":113},{"dbname":"PANTHER","id":"PTHR48104","interpro_description":"Metacaspase","interpro_id":"IPR050452","interpro_name":"Metacaspase","locations":[{"end":431,"start":135}],"match_end":431,"match_start":135,"name":"METACASPASE-4"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":124,"start":1}],"match_end":124,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":24,"start":12}],"match_end":24,"match_start":12,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":59,"start":46}],"match_end":59,"match_start":46,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3987791,"start_pos":3986151,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":23,"start":6}},{"range":{"end":39,"start":35}},{"range":{"end":102,"start":82}},{"range":{"end":328,"start":317}},{"range":{"end":404,"start":387}}],"name":"pca1","ortholog_annotations":[{"gene_uniquename":"SJAG_00135","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1840.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00135","ortholog_taxonid":4932,"ortholog_uniquename":"YOR197W","reference_uniquename":"PMID:29761456"}],"product":"metacaspase Pca1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004197"]}},"subset_termids":["GO:0008233","GO:0005829","GO:0005634","GO:0030163","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004197":null,"GO:0005634":null,"GO:0005829":null,"GO:0006515":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00135.1"],"transcripts_by_uniquename":{"SJAG_00135.1":null},"uniprot_identifier":"B6JXJ3","uniquename":"SJAG_00135"}


id: SJAG_00136
data:
  {"cv_annotations":{"biological_process":[{"annotations":[67799],"is_not":false,"summary":null,"term":"GO:0046034"},{"annotations":[67802],"is_not":false,"summary":null,"term":"GO:1902600"},{"annotations":[78840],"is_not":false,"summary":null,"term":"GO:0007035"}],"cellular_component":[{"annotations":[99235],"is_not":false,"summary":null,"term":"GO:0000221"}],"molecular_function":[{"annotations":[67800],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[99240],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[78839],"is_not":false,"summary":null,"term":"GO:0046961"}],"mondo":[{"annotations":[87405],"is_not":false,"summary":null,"term":"MONDO:0007420"},{"annotations":[85657],"is_not":false,"summary":null,"term":"MONDO:0009968"},{"annotations":[85446],"is_not":false,"summary":null,"term":"MONDO:0014646"}]},"dbxrefs":["InterPro:IPR004100","GOA:B6JXJ4","InterPro:IPR020003","InterPro:IPR022879","EnsemblGenomes-Gn:SJAG_00136","EnsemblGenomes-Tr:EEB05138","InterPro:IPR027417","InterPro:IPR000194","InterPro:IPR005723","UniProtKB/TrEMBL:B6JXJ4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"but1","uniquename":"SJAG_00141"},{"name":"ssm4","uniquename":"SJAG_00140"},{"name":"tpr1","uniquename":"SJAG_00139"},{"uniquename":"SJAG_00138"},{"name":"ypp1","uniquename":"SJAG_00137"},{"name":"vma2","uniquename":"SJAG_00136"},{"name":"pca1","uniquename":"SJAG_00135"},{"name":"pgm2","uniquename":"SJAG_00134"},{"name":"atp5","uniquename":"SJAG_00133"},{"uniquename":"SJAG_00132"},{"name":"pdi5","uniquename":"SJAG_00131"}],"genes_by_uniquename":{"HGNC:853":null,"HGNC:854":null,"SJAG_00136":null,"SPAC637.05c":null,"YBR127C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ATP synthase alpha/beta family, beta-barrel domain","id":"PF02874","interpro_description":"ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain","interpro_id":"IPR004100","interpro_name":"ATPase_F1/V1/A1_a/bsu_N","locations":[{"end":106,"start":40}],"match_end":106,"match_start":40,"name":"ATP-synt_ab_N"},{"dbname":"PFAM","description":"ATP synthase alpha/beta family, nucleotide-binding domain","id":"PF00006","interpro_description":"ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain","interpro_id":"IPR000194","interpro_name":"ATPase_F1/V1/A1_a/bsu_nucl-bd","locations":[{"end":390,"start":163}],"match_end":390,"match_start":163,"name":"ATP-synt_ab"},{"dbname":"PFAM","description":"C-terminal domain of V and A type ATP synthase","id":"PF22919","interpro_description":"ATP synthase A/B type, C-terminal domain","interpro_id":"IPR055190","interpro_name":"ATP-synt_VA_C","locations":[{"end":495,"start":396}],"match_end":495,"match_start":396,"name":"ATP-synt_VA_C"},{"dbname":"CDD","description":"ATP-synt_V_A-type_beta_C","id":"cd18112","locations":[{"end":494,"start":400}],"match_end":494,"match_start":400,"name":"ATP-synt_V_A-type_beta_C"},{"dbname":"CDD","description":"ATP-synt_V_A-type_beta_N","id":"cd18118","locations":[{"end":107,"start":37}],"match_end":107,"match_start":37,"name":"ATP-synt_V_A-type_beta_N"},{"dbname":"CDD","description":"V_A-ATPase_B","id":"cd01135","locations":[{"end":398,"start":108}],"match_end":398,"match_start":108,"name":"V_A-ATPase_B"},{"dbname":"PROSITE_PATTERNS","description":"ATP synthase alpha and beta subunits signature.","id":"PS00152","interpro_description":"ATPase, alpha/beta subunit, nucleotide-binding domain, active site","interpro_id":"IPR020003","interpro_name":"ATPase_a/bsu_AS","locations":[{"end":390,"start":381}],"match_end":390,"match_start":381,"name":"ATPASE_ALPHA_BETA"},{"dbname":"FUNFAM","description":"V-type proton ATPase subunit B, brain","id":"G3DSA:3.40.50.12240:FF:000001","locations":[{"end":502,"start":45}],"match_end":502,"match_start":45},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":396,"start":110}],"match_end":396,"match_start":110,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.12240","locations":[{"end":502,"start":45}],"match_end":502,"match_start":45},{"dbname":"PANTHER","id":"PTHR43389","interpro_description":"V-type ATP synthase regulatory subunit B/beta","interpro_id":"IPR022879","interpro_name":"V-ATPase_su_B/beta","locations":[{"end":500,"start":34}],"match_end":500,"match_start":34,"name":"V-TYPE PROTON ATPASE SUBUNIT B"},{"dbname":"PIRSF","id":"PIRSF039114","interpro_description":"V-type ATP synthase regulatory subunit B/beta","interpro_id":"IPR022879","interpro_name":"V-ATPase_su_B/beta","locations":[{"end":505,"start":27}],"match_end":505,"match_start":27,"name":"V-ATPsynth_beta/V-ATPase_B"},{"dbname":"HAMAP","description":"V-type ATP synthase beta chain [atpB].","id":"MF_00310","interpro_description":"V-type ATP synthase regulatory subunit B/beta","interpro_id":"IPR022879","interpro_name":"V-ATPase_su_B/beta","locations":[{"end":499,"start":34}],"match_end":499,"match_start":34,"name":"ATP_synth_B_arch"},{"dbname":"NCBIFAM","description":"V-type ATP synthase subunit B","id":"NF003235","locations":[{"end":500,"start":36}],"match_end":500,"match_start":36,"name":"PRK04196.1"},{"dbname":"NCBIFAM","description":"V-type ATPase subunit B","id":"TIGR01040","interpro_description":"ATPase, V1 complex, subunit B","interpro_id":"IPR005723","interpro_name":"ATPase_V1-cplx_bsu","locations":[{"end":500,"start":36}],"match_end":500,"match_start":36,"name":"V-ATPase_V1_B"}],"location":{"chromosome_name":"supercont5.1","end_pos":3984860,"start_pos":3983107,"strand":"reverse"},"name":"vma2","ortholog_annotations":[{"gene_uniquename":"SJAG_00136","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:853","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00136","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:854","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00136","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC637.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00136","ortholog_taxonid":4932,"ortholog_uniquename":"YBR127C","reference_uniquename":"PMID:29761456"}],"product":"V-type ATPase V1 subunit B","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0046961","GO:0016887"]}},"subset_termids":["GO:0005773","MONDO:0006025","GO:0055086","GO:0055085","GO:0022857","MONDO:0005240","GO:0016887"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000221":null,"GO:0005524":null,"GO:0007035":null,"GO:0016887":null,"GO:0046034":null,"GO:0046961":null,"GO:1902600":null,"MONDO:0007420":null,"MONDO:0009968":null,"MONDO:0014646":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00136.1"],"transcripts_by_uniquename":{"SJAG_00136.1":null},"uniprot_identifier":"B6JXJ4","uniquename":"SJAG_00136"}


id: SJAG_00137
data:
  {"cv_annotations":{"biological_process":[{"annotations":[99232],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[99233],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[99228],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[99229],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[99230],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[99231],"is_not":false,"summary":null,"term":"GO:0005886"}],"mondo":[{"annotations":[85402],"is_not":false,"summary":null,"term":"MONDO:0800030"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00137","InterPro:IPR011990","InterPro:IPR019734","InterPro:IPR013026","EnsemblGenomes-Tr:EEB05139","UniProtKB/TrEMBL:B6JXJ5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ckb1","uniquename":"SJAG_00142"},{"name":"but1","uniquename":"SJAG_00141"},{"name":"ssm4","uniquename":"SJAG_00140"},{"name":"tpr1","uniquename":"SJAG_00139"},{"uniquename":"SJAG_00138"},{"name":"ypp1","uniquename":"SJAG_00137"},{"name":"vma2","uniquename":"SJAG_00136"},{"name":"pca1","uniquename":"SJAG_00135"},{"name":"pgm2","uniquename":"SJAG_00134"},{"name":"atp5","uniquename":"SJAG_00133"},{"uniquename":"SJAG_00132"}],"genes_by_uniquename":{"HGNC:19750":null,"HGNC:19858":null,"SJAG_00137":null,"SPAC637.04":null,"YGR198W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROSITE_PROFILES","description":"TPR repeat profile.","id":"PS50005","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":740,"start":707}],"match_end":740,"match_start":707,"name":"TPR"},{"dbname":"SMART","id":"SM00028","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":531,"start":498},{"end":740,"start":673},{"end":815,"start":782}],"match_end":815,"match_start":498,"name":"tpr_5"},{"dbname":"SUPERFAMILY","id":"SSF48452","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":559,"start":485},{"end":812,"start":672}],"match_end":812,"match_start":485,"name":"TPR-like"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":563,"start":382},{"end":823,"start":628}],"match_end":823,"match_start":382,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR23083","interpro_description":"Endocytosis and PI4K-regulating protein","interpro_id":"IPR051722","interpro_name":"Endocytosis_PI4K-reg_protein","locations":[{"end":644,"start":5}],"match_end":644,"match_start":5,"name":"TETRATRICOPEPTIDE REPEAT PROTEIN, TPR"}],"location":{"chromosome_name":"supercont5.1","end_pos":3982829,"start_pos":3980108,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":97,"start":85}},{"range":{"end":182,"start":173}},{"range":{"end":736,"start":724}}],"name":"ypp1","ortholog_annotations":[{"gene_uniquename":"SJAG_00137","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19750","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00137","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19858","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00137","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC637.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00137","ortholog_taxonid":4932,"ortholog_uniquename":"YGR198W","reference_uniquename":"PMID:29761456"}],"product":"phosphatidylinositol-4 kinase plasma membrane scaffold Erf3 partner Ypp1","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0005886","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0005886":null,"GO:0006886":null,"GO:0006897":null,"GO:0032153":null,"GO:0051286":null,"MONDO:0800030":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00137.1"],"transcripts_by_uniquename":{"SJAG_00137.1":null},"uniprot_identifier":"B6JXJ5","uniquename":"SJAG_00137"}


id: SJAG_00138
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[99227],"is_not":false,"summary":null,"term":"GO:0016020"}]},"dbxrefs":["GOA:B6JXJ6","UniProtKB/TrEMBL:B6JXJ6","InterPro:IPR013920","EnsemblGenomes-Gn:SJAG_00138","EnsemblGenomes-Tr:EEB05140"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ric1","uniquename":"SJAG_00143"},{"name":"ckb1","uniquename":"SJAG_00142"},{"name":"but1","uniquename":"SJAG_00141"},{"name":"ssm4","uniquename":"SJAG_00140"},{"name":"tpr1","uniquename":"SJAG_00139"},{"uniquename":"SJAG_00138"},{"name":"ypp1","uniquename":"SJAG_00137"},{"name":"vma2","uniquename":"SJAG_00136"},{"name":"pca1","uniquename":"SJAG_00135"},{"name":"pgm2","uniquename":"SJAG_00134"},{"name":"atp5","uniquename":"SJAG_00133"}],"genes_by_uniquename":{"SJAG_00138":null,"SPAC637.03":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Fungal protein of unknown function (DUF1774)","id":"PF08611","interpro_description":"Protein of unknown function DUF1774, fungi","interpro_id":"IPR013920","interpro_name":"DUF1774_fun","locations":[{"end":262,"start":173}],"match_end":262,"match_start":173,"name":"DUF1774"},{"dbname":"PANTHER","id":"PTHR37992","interpro_description":"Protein of unknown function DUF1774, fungi","interpro_id":"IPR013920","interpro_name":"DUF1774_fun","locations":[{"end":265,"start":6}],"match_end":265,"match_start":6,"name":"EXPRESSED PROTEIN"}],"location":{"chromosome_name":"supercont5.1","end_pos":3979321,"start_pos":3978521,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00138","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC637.03","reference_uniquename":"PMID:21511999"}],"product":"DUF1774 family multi-spanning conserved fungal membrane protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0016020":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":32,"start":13}},{"assigned_by":"TMHMM","range":{"end":74,"start":52}},{"assigned_by":"TMHMM","range":{"end":103,"start":81}},{"assigned_by":"TMHMM","range":{"end":127,"start":108}},{"assigned_by":"TMHMM","range":{"end":165,"start":148}},{"assigned_by":"TMHMM","range":{"end":202,"start":180}},{"assigned_by":"TMHMM","range":{"end":244,"start":222}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00138.1"],"transcripts_by_uniquename":{"SJAG_00138.1":null},"uniprot_identifier":"B6JXJ6","uniquename":"SJAG_00138"}


id: SJAG_00139
data:
  {"coiled_coil_coords":[{"range":{"end":541,"start":521}},{"range":{"end":921,"start":874}}],"cv_annotations":{"biological_process":[{"annotations":[95537],"is_not":false,"summary":null,"term":"GO:0006362"},{"annotations":[95538],"is_not":false,"summary":null,"term":"GO:0006368"}],"cellular_component":[{"annotations":[78962],"is_not":false,"summary":null,"term":"GO:0016593"}],"molecular_function":[{"annotations":[78961],"is_not":false,"summary":null,"term":"GO:0000993"}]},"dbxrefs":["GOA:B6JXJ7","EnsemblGenomes-Gn:SJAG_00139","InterPro:IPR019734","EnsemblGenomes-Tr:EEB05141","UniProtKB/TrEMBL:B6JXJ7","InterPro:IPR031101","InterPro:IPR011990","InterPro:IPR013026","InterPro:IPR001440"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":1044,"start":827}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"grp1","uniquename":"SJAG_00144"},{"name":"ric1","uniquename":"SJAG_00143"},{"name":"ckb1","uniquename":"SJAG_00142"},{"name":"but1","uniquename":"SJAG_00141"},{"name":"ssm4","uniquename":"SJAG_00140"},{"name":"tpr1","uniquename":"SJAG_00139"},{"uniquename":"SJAG_00138"},{"name":"ypp1","uniquename":"SJAG_00137"},{"name":"vma2","uniquename":"SJAG_00136"},{"name":"pca1","uniquename":"SJAG_00135"},{"name":"pgm2","uniquename":"SJAG_00134"}],"genes_by_uniquename":{"HGNC:16850":null,"SJAG_00139":null,"SPAC27D7.14c":null,"YOL145C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Tetratricopeptide repeat","id":"PF13181","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":726,"start":701}],"match_end":726,"match_start":701,"name":"TPR_8"},{"dbname":"PFAM","description":"Tetratricopeptide repeat","id":"PF13424","locations":[{"end":539,"start":472}],"match_end":539,"match_start":472,"name":"TPR_12"},{"dbname":"PFAM","description":"Tetratricopeptide repeat","id":"PF00515","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":356,"start":324}],"match_end":356,"match_start":324,"name":"TPR_1"},{"dbname":"PFAM","description":"Tetratricopeptide repeat","id":"PF13432","locations":[{"end":204,"start":156}],"match_end":204,"match_start":156,"name":"TPR_16"},{"dbname":"PROSITE_PROFILES","description":"TPR repeat region circular profile.","id":"PS50293","locations":[{"end":357,"start":324}],"match_end":357,"match_start":324,"name":"TPR_REGION"},{"dbname":"PROSITE_PROFILES","description":"TPR repeat profile.","id":"PS50005","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":357,"start":324},{"end":732,"start":699}],"match_end":732,"match_start":324,"name":"TPR"},{"dbname":"SMART","id":"SM00028","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":83,"start":50},{"end":206,"start":173},{"end":241,"start":208},{"end":286,"start":254},{"end":391,"start":324},{"end":506,"start":473},{"end":545,"start":512},{"end":665,"start":623},{"end":732,"start":699},{"end":775,"start":735}],"match_end":775,"match_start":50,"name":"tpr_5"},{"dbname":"SUPERFAMILY","id":"SSF48452","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":102,"start":51},{"end":403,"start":155},{"end":545,"start":444},{"end":841,"start":639}],"match_end":841,"match_start":51,"name":"TPR-like"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":105,"start":36},{"end":420,"start":158},{"end":633,"start":442},{"end":924,"start":639}],"match_end":924,"match_start":36,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR14027","interpro_description":"RNA polymerase-associated protein Ctr9","interpro_id":"IPR031101","interpro_name":"Ctr9","locations":[{"end":1034,"start":16}],"match_end":1034,"match_start":16,"name":"RNA POLYMERASE-ASSOCIATED PROTEIN CTR9"},{"dbname":"COILS","id":"Coil","locations":[{"end":541,"start":521},{"end":921,"start":874}],"match_end":921,"match_start":521,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":1044,"start":827}],"match_end":1044,"match_start":827,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":920,"start":868},{"end":965,"start":948},{"end":1044,"start":1022}],"match_end":1044,"match_start":868,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":947,"start":938},{"end":975,"start":966}],"match_end":975,"match_start":938,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3977775,"start_pos":3974543,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":905,"start":870}},{"range":{"end":991,"start":928}},{"range":{"end":1033,"start":1022}}],"name":"tpr1","ortholog_annotations":[{"gene_uniquename":"SJAG_00139","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16850","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00139","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC27D7.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00139","ortholog_taxonid":4932,"ortholog_uniquename":"YOL145C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00139","ortholog_taxonid":4932,"ortholog_uniquename":"YOL145C","reference_uniquename":"PMID:26896847"}],"product":"RNA polymerase II associated Paf1 complex subunit Tpr1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000993"]}},"subset_termids":["GO:0005654","GO:0006351","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000993":null,"GO:0006362":null,"GO:0006368":null,"GO:0016593":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00139.1"],"transcripts_by_uniquename":{"SJAG_00139.1":null},"uniprot_identifier":"B6JXJ7","uniquename":"SJAG_00139"}


id: SJAG_00140
data:
  {"coiled_coil_coords":[{"range":{"end":182,"start":155}},{"range":{"end":220,"start":193}},{"range":{"end":276,"start":235}},{"range":{"end":363,"start":312}},{"range":{"end":394,"start":374}},{"range":{"end":471,"start":430}},{"range":{"end":508,"start":481}}],"cv_annotations":{"biological_process":[{"annotations":[95532],"is_not":false,"summary":null,"term":"GO:0030989"},{"annotations":[76675],"is_not":false,"summary":null,"term":"GO:0000132"},{"annotations":[76677],"is_not":false,"summary":null,"term":"GO:0000743"}],"cellular_component":[{"annotations":[95524],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[95525],"is_not":false,"summary":null,"term":"GO:1903754"},{"annotations":[95527],"is_not":false,"summary":null,"term":"GO:0005869"},{"annotations":[95528],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[95530],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[95531],"is_not":false,"summary":null,"term":"GO:0110092"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00140","InterPro:IPR036859","EnsemblGenomes-Tr:EEB05142","UniProtKB/TrEMBL:B6JXJ8","InterPro:IPR000938"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":109,"start":83}},{"range":{"end":151,"start":131}},{"range":{"end":849,"start":802}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mei2","uniquename":"SJAG_00145"},{"name":"grp1","uniquename":"SJAG_00144"},{"name":"ric1","uniquename":"SJAG_00143"},{"name":"ckb1","uniquename":"SJAG_00142"},{"name":"but1","uniquename":"SJAG_00141"},{"name":"ssm4","uniquename":"SJAG_00140"},{"name":"tpr1","uniquename":"SJAG_00139"},{"uniquename":"SJAG_00138"},{"name":"ypp1","uniquename":"SJAG_00137"},{"name":"vma2","uniquename":"SJAG_00136"},{"name":"pca1","uniquename":"SJAG_00135"}],"genes_by_uniquename":{"HGNC:10461":null,"HGNC:24314":null,"HGNC:2586":null,"HGNC:26108":null,"SJAG_00140":null,"SPAC27D7.13c":null,"YPL174C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CAP-Gly domain","id":"PF01302","interpro_description":"CAP Gly-rich domain","interpro_id":"IPR000938","interpro_name":"CAP-Gly_domain","locations":[{"end":69,"start":7}],"match_end":69,"match_start":7,"name":"CAP_GLY"},{"dbname":"PROSITE_PATTERNS","description":"CAP-Gly domain signature.","id":"PS00845","interpro_description":"CAP Gly-rich domain","interpro_id":"IPR000938","interpro_name":"CAP-Gly_domain","locations":[{"end":54,"start":23}],"match_end":54,"match_start":23,"name":"CAP_GLY_1"},{"dbname":"PROSITE_PROFILES","description":"CAP-Gly domain profile.","id":"PS50245","interpro_description":"CAP Gly-rich domain","interpro_id":"IPR000938","interpro_name":"CAP-Gly_domain","locations":[{"end":65,"start":23}],"match_end":65,"match_start":23,"name":"CAP_GLY_2"},{"dbname":"SMART","id":"SM01052","interpro_description":"CAP Gly-rich domain","interpro_id":"IPR000938","interpro_name":"CAP-Gly_domain","locations":[{"end":70,"start":6}],"match_end":70,"match_start":6,"name":"CAP_GLY_2"},{"dbname":"SUPERFAMILY","id":"SSF74924","interpro_description":"CAP Gly-rich domain superfamily","interpro_id":"IPR036859","interpro_name":"CAP-Gly_dom_sf","locations":[{"end":97,"start":4}],"match_end":97,"match_start":4,"name":"Cap-Gly domain"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.190","interpro_description":"CAP Gly-rich domain superfamily","interpro_id":"IPR036859","interpro_name":"CAP-Gly_dom_sf","locations":[{"end":91,"start":3}],"match_end":91,"match_start":3},{"dbname":"PANTHER","id":"PTHR18916","locations":[{"end":378,"start":15}],"match_end":378,"match_start":15,"name":"DYNACTIN 1-RELATED MICROTUBULE-BINDING"},{"dbname":"COILS","id":"Coil","locations":[{"end":182,"start":155},{"end":220,"start":193},{"end":276,"start":235},{"end":363,"start":312},{"end":394,"start":374},{"end":471,"start":430},{"end":508,"start":481}],"match_end":508,"match_start":155,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":109,"start":83},{"end":151,"start":131},{"end":849,"start":802}],"match_end":849,"match_start":83,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":109,"start":93},{"end":849,"start":825}],"match_end":849,"match_start":93,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3973898,"start_pos":3970760,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":184,"start":169}},{"range":{"end":321,"start":309}},{"range":{"end":425,"start":408}},{"range":{"end":870,"start":855}},{"range":{"end":903,"start":873}}],"name":"ssm4","ortholog_annotations":[{"gene_uniquename":"SJAG_00140","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10461","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00140","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24314","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00140","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2586","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00140","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26108","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00140","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC27D7.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00140","ortholog_taxonid":4932,"ortholog_uniquename":"YPL174C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00140","ortholog_taxonid":4932,"ortholog_uniquename":"YPL174C","reference_uniquename":"PMID:26896847"}],"product":"dynactin microtubule-binding subunit, p150-Glued Ssm4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005816","GO:0007163","GO:0000747","GO:0015630","GO:0015629","GO:0072686","GO:0005938","GO:0005634","GO:0140013","GO:0000226"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000132":null,"GO:0000743":null,"GO:0005869":null,"GO:0030989":null,"GO:0035974":null,"GO:0051285":null,"GO:0072686":null,"GO:0110092":null,"GO:1903754":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00140.1"],"transcripts_by_uniquename":{"SJAG_00140.1":null},"uniprot_identifier":"B6JXJ8","uniquename":"SJAG_00140"}


id: SJAG_00141
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95520],"is_not":false,"summary":null,"term":"GO:0061692"},{"annotations":[95522],"is_not":false,"summary":null,"term":"GO:0042744"}],"cellular_component":[{"annotations":[95518],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[95519],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[95523],"is_not":false,"summary":null,"term":"GO:0008379"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JXJ9","InterPro:IPR000866","InterPro:IPR036249","EnsemblGenomes-Gn:SJAG_00141","EnsemblGenomes-Tr:EEB05143","GOA:B6JXJ9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"apc14","uniquename":"SJAG_00146"},{"name":"mei2","uniquename":"SJAG_00145"},{"name":"grp1","uniquename":"SJAG_00144"},{"name":"ric1","uniquename":"SJAG_00143"},{"name":"ckb1","uniquename":"SJAG_00142"},{"name":"but1","uniquename":"SJAG_00141"},{"name":"ssm4","uniquename":"SJAG_00140"},{"name":"tpr1","uniquename":"SJAG_00139"},{"uniquename":"SJAG_00138"},{"name":"ypp1","uniquename":"SJAG_00137"},{"name":"vma2","uniquename":"SJAG_00136"}],"genes_by_uniquename":{"SJAG_00141":null,"SPAC27D7.12c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SUPERFAMILY","id":"SSF52833","interpro_description":"Thioredoxin-like superfamily","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like_sf","locations":[{"end":228,"start":121}],"match_end":228,"match_start":121,"name":"Thioredoxin-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.30.10","locations":[{"end":235,"start":91}],"match_end":235,"match_start":91,"name":"Glutaredoxin"}],"location":{"chromosome_name":"supercont5.1","end_pos":3970423,"start_pos":3969713,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":38,"start":22}}],"name":"but1","ortholog_annotations":[{"gene_uniquename":"SJAG_00141","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC27D7.12c","reference_uniquename":"PMID:21511999"}],"product":"thioredoxin family protein But1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008379"]}},"subset_termids":["GO:0051920","GO:0005634","GO:0016491","GO:0005829","GO:0098754"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008379":null,"GO:0042744":null,"GO:0061692":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00141.1"],"transcripts_by_uniquename":{"SJAG_00141.1":null},"uniprot_identifier":"B6JXJ9","uniquename":"SJAG_00141"}


id: SJAG_00142
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91507],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[91508],"is_not":false,"summary":null,"term":"GO:0090053"},{"annotations":[91509],"is_not":false,"summary":null,"term":"GO:0090055"},{"annotations":[78455],"is_not":false,"summary":null,"term":"GO:0006359"},{"annotations":[91511],"is_not":false,"summary":null,"term":"GO:0007165"}],"cellular_component":[{"annotations":[78452],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[91503],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[78453],"is_not":false,"summary":null,"term":"GO:0005956"},{"annotations":[78454],"is_not":false,"summary":null,"term":"GO:0034456"}],"molecular_function":[{"annotations":[91513],"is_not":false,"summary":null,"term":"GO:0043539"}],"mondo":[{"annotations":[87140],"is_not":false,"summary":null,"term":"MONDO:0032889"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00142","EnsemblGenomes-Tr:EEB05144","GOA:B6JXK0","InterPro:IPR016149","InterPro:IPR035991","InterPro:IPR000704","UniProtKB/TrEMBL:B6JXK0"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"smd1","uniquename":"SJAG_00147"},{"name":"apc14","uniquename":"SJAG_00146"},{"name":"mei2","uniquename":"SJAG_00145"},{"name":"grp1","uniquename":"SJAG_00144"},{"name":"ric1","uniquename":"SJAG_00143"},{"name":"ckb1","uniquename":"SJAG_00142"},{"name":"but1","uniquename":"SJAG_00141"},{"name":"ssm4","uniquename":"SJAG_00140"},{"name":"tpr1","uniquename":"SJAG_00139"},{"uniquename":"SJAG_00138"},{"name":"ypp1","uniquename":"SJAG_00137"}],"genes_by_uniquename":{"HGNC:2460":null,"SJAG_00142":null,"SPAC1851.03":null,"YGL019W":null,"YOR039W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Casein kinase II regulatory subunit","id":"PF01214","interpro_description":"Casein kinase II, regulatory subunit","interpro_id":"IPR000704","interpro_name":"Casein_kinase_II_reg-sub","locations":[{"end":195,"start":16}],"match_end":195,"match_start":16,"name":"CK_II_beta"},{"dbname":"SMART","id":"SM01085","interpro_description":"Casein kinase II, regulatory subunit","interpro_id":"IPR000704","interpro_name":"Casein_kinase_II_reg-sub","locations":[{"end":195,"start":15}],"match_end":195,"match_start":15,"name":"CK_II_beta_2"},{"dbname":"PRINTS","description":"Casein kinase II regulatory subunit family signature","id":"PR00472","interpro_description":"Casein kinase II, regulatory subunit","interpro_id":"IPR000704","interpro_name":"Casein_kinase_II_reg-sub","locations":[{"end":46,"start":15},{"end":105,"start":84},{"end":152,"start":109},{"end":176,"start":159}],"match_end":176,"match_start":15,"name":"CASNKINASEII"},{"dbname":"FUNFAM","description":"Casein kinase II subunit beta","id":"G3DSA:1.10.1820.10:FF:000005","locations":[{"end":109,"start":8}],"match_end":109,"match_start":8},{"dbname":"FUNFAM","description":"Casein kinase II subunit beta","id":"G3DSA:2.20.25.20:FF:000001","locations":[{"end":183,"start":110}],"match_end":183,"match_start":110},{"dbname":"SUPERFAMILY","id":"SSF57798","interpro_description":"Casein kinase II subunit beta-like","interpro_id":"IPR035991","interpro_name":"Casein_kinase_II_beta-like","locations":[{"end":205,"start":15}],"match_end":205,"match_start":15,"name":"Casein kinase II beta subunit"},{"dbname":"GENE3D","id":"G3DSA:1.10.1820.10","interpro_description":"Casein kinase II, regulatory subunit, N-terminal","interpro_id":"IPR016149","interpro_name":"Casein_kin_II_reg-sub_N","locations":[{"end":109,"start":8}],"match_end":109,"match_start":8,"name":"protein kinase ck2 holoenzyme, chain C, domain 1"},{"dbname":"GENE3D","id":"G3DSA:2.20.25.20","locations":[{"end":184,"start":110}],"match_end":184,"match_start":110},{"dbname":"PANTHER","id":"PTHR11740","interpro_description":"Casein kinase II, regulatory subunit","interpro_id":"IPR000704","interpro_name":"Casein_kinase_II_reg-sub","locations":[{"end":218,"start":6}],"match_end":218,"match_start":6,"name":"CASEIN KINASE II SUBUNIT BETA"}],"location":{"chromosome_name":"supercont5.1","end_pos":3968254,"start_pos":3967325,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":12,"start":4}},{"range":{"end":76,"start":56}}],"name":"ckb1","ortholog_annotations":[{"gene_uniquename":"SJAG_00142","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2460","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00142","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1851.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00142","ortholog_taxonid":4932,"ortholog_uniquename":"YGL019W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00142","ortholog_taxonid":4932,"ortholog_uniquename":"YOR039W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00142","ortholog_taxonid":4932,"ortholog_uniquename":"YOR039W","reference_uniquename":"PMID:26896847"}],"product":"CK2 family regulatory subunit Ckb1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0043539"]}},"subset_termids":["GO:0140096","GO:0006355","GO:0030684","GO:0098772","GO:0016301","MONDO:0700092","GO:0005816","GO:0015630","GO:0005634","GO:0004672","GO:0005730","GO:0006351","GO:0030234","GO:0006325","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0005737":null,"GO:0005956":null,"GO:0006359":null,"GO:0007165":null,"GO:0034456":null,"GO:0043539":null,"GO:0044732":null,"GO:0090053":null,"GO:0090055":null,"MONDO:0032889":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00142.1"],"transcripts_by_uniquename":{"SJAG_00142.1":null},"uniprot_identifier":"B6JXK0","uniquename":"SJAG_00142"}


id: SJAG_00143
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76108],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[91518],"is_not":false,"summary":null,"term":"GO:1904515"},{"annotations":[76107],"is_not":false,"summary":null,"term":"GO:0042147"}],"cellular_component":[{"annotations":[76106],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76105],"is_not":false,"summary":null,"term":"GO:0000139"},{"annotations":[76109],"is_not":false,"summary":null,"term":"GO:0034066"}],"molecular_function":[{"annotations":[91520],"is_not":false,"summary":null,"term":"GO:0005085"}],"mondo":[{"annotations":[87016],"is_not":false,"summary":null,"term":"MONDO:0032901"}]},"dbxrefs":["GOA:B6JXK1","InterPro:IPR036322","UniProtKB/TrEMBL:B6JXK1","EnsemblGenomes-Tr:EEB05145","EnsemblGenomes-Gn:SJAG_00143","InterPro:IPR040096","InterPro:IPR009771"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrps26","uniquename":"SJAG_00148"},{"name":"smd1","uniquename":"SJAG_00147"},{"name":"apc14","uniquename":"SJAG_00146"},{"name":"mei2","uniquename":"SJAG_00145"},{"name":"grp1","uniquename":"SJAG_00144"},{"name":"ric1","uniquename":"SJAG_00143"},{"name":"ckb1","uniquename":"SJAG_00142"},{"name":"but1","uniquename":"SJAG_00141"},{"name":"ssm4","uniquename":"SJAG_00140"},{"name":"tpr1","uniquename":"SJAG_00139"},{"uniquename":"SJAG_00138"}],"genes_by_uniquename":{"HGNC:17686":null,"SJAG_00143":null,"SPAC1851.04c":null,"YLR039C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RIC1","id":"PF07064","interpro_description":"Ribosome control protein 1","interpro_id":"IPR009771","interpro_name":"Ribosome_control_1","locations":[{"end":983,"start":774}],"match_end":983,"match_start":774,"name":"RIC1"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":125,"start":39},{"end":324,"start":233},{"end":563,"start":447}],"match_end":563,"match_start":39,"name":"WD40 repeat-like"},{"dbname":"PANTHER","id":"PTHR22746","interpro_description":"RAB6A-GEF complex partner protein 1","interpro_id":"IPR040096","interpro_name":"Ric1","locations":[{"end":995,"start":1}],"match_end":995,"match_start":1,"name":"RAB6A-GEF COMPLEX PARTNER PROTEIN 1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3966878,"start_pos":3963807,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":347,"start":330}},{"range":{"end":629,"start":617}},{"range":{"end":748,"start":743}},{"range":{"end":836,"start":824}},{"range":{"end":962,"start":951}}],"name":"ric1","ortholog_annotations":[{"gene_uniquename":"SJAG_00143","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17686","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00143","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1851.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00143","ortholog_taxonid":4932,"ortholog_uniquename":"YLR039C","reference_uniquename":"PMID:29761456"}],"product":"Rab-specific(Ryh1/Ypt6) Ric1-Rgp1 guanyl-nucleotide exchange factor subunit Ric1/Sat4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005085"]}},"subset_termids":["GO:0016192","GO:0005085","GO:0003924","GO:0098772","GO:0005794","GO:0030234","GO:0005829","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005085":null,"GO:0005829":null,"GO:0006886":null,"GO:0034066":null,"GO:0042147":null,"GO:1904515":null,"MONDO:0032901":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00143.1"],"transcripts_by_uniquename":{"SJAG_00143.1":null},"uniprot_identifier":"B6JXK1","uniquename":"SJAG_00143"}


id: SJAG_00144
data:
  {"coiled_coil_coords":[{"range":{"end":70,"start":43}},{"range":{"end":163,"start":101}},{"range":{"end":301,"start":267}},{"range":{"end":396,"start":341}},{"range":{"end":483,"start":432}},{"range":{"end":530,"start":486}}],"cv_annotations":{"biological_process":[{"annotations":[95473],"is_not":false,"summary":null,"term":"GO:0043001"},{"annotations":[95474],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[95471],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[95472],"is_not":false,"summary":null,"term":"GO:0005794"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JXK2","EnsemblGenomes-Gn:SJAG_00144","EnsemblGenomes-Tr:EEB05146","InterPro:IPR000237"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":267,"start":181}},{"range":{"end":556,"start":528}},{"range":{"end":632,"start":598}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"meu22","uniquename":"SJAG_00149"},{"name":"mrps26","uniquename":"SJAG_00148"},{"name":"smd1","uniquename":"SJAG_00147"},{"name":"apc14","uniquename":"SJAG_00146"},{"name":"mei2","uniquename":"SJAG_00145"},{"name":"grp1","uniquename":"SJAG_00144"},{"name":"ric1","uniquename":"SJAG_00143"},{"name":"ckb1","uniquename":"SJAG_00142"},{"name":"but1","uniquename":"SJAG_00141"},{"name":"ssm4","uniquename":"SJAG_00140"},{"name":"tpr1","uniquename":"SJAG_00139"}],"genes_by_uniquename":{"SJAG_00144":null,"SPAC27D7.02c":null,"YLR309C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GRIP domain","id":"PF01465","interpro_description":"GRIP domain","interpro_id":"IPR000237","interpro_name":"GRIP_dom","locations":[{"end":673,"start":633}],"match_end":673,"match_start":633,"name":"GRIP"},{"dbname":"PROSITE_PROFILES","description":"GRIP domain profile.","id":"PS50913","interpro_description":"GRIP domain","interpro_id":"IPR000237","interpro_name":"GRIP_dom","locations":[{"end":676,"start":628}],"match_end":676,"match_start":628,"name":"GRIP"},{"dbname":"SMART","id":"SM00755","interpro_description":"GRIP domain","interpro_id":"IPR000237","interpro_name":"GRIP_dom","locations":[{"end":676,"start":631}],"match_end":676,"match_start":631,"name":"1grip"},{"dbname":"SUPERFAMILY","id":"SSF58100","locations":[{"end":167,"start":75}],"match_end":167,"match_start":75,"name":"Bacterial hemolysins"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.1490","locations":[{"end":603,"start":416}],"match_end":603,"match_start":416},{"dbname":"COILS","id":"Coil","locations":[{"end":70,"start":43},{"end":163,"start":101},{"end":301,"start":267},{"end":396,"start":341},{"end":483,"start":432},{"end":530,"start":486}],"match_end":530,"match_start":43,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":267,"start":181},{"end":556,"start":528},{"end":632,"start":598}],"match_end":632,"match_start":181,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":251,"start":233},{"end":622,"start":599}],"match_end":622,"match_start":233,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":202,"start":185}],"match_end":202,"match_start":185,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3963412,"start_pos":3961379,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":561,"start":539}},{"range":{"end":670,"start":656}}],"name":"grp1","ortholog_annotations":[{"gene_uniquename":"SJAG_00144","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC27D7.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00144","ortholog_taxonid":4932,"ortholog_uniquename":"YLR309C","reference_uniquename":"PMID:29761456"}],"product":"Golgi GRIP domain protein Grp1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005794","GO:0016192","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0005829":null,"GO:0006886":null,"GO:0043001":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00144.1"],"transcripts_by_uniquename":{"SJAG_00144.1":null},"uniprot_identifier":"B6JXK2","uniquename":"SJAG_00144"}


id: SJAG_00145
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95481],"is_not":false,"summary":null,"term":"GO:0051728"},{"annotations":[95482],"is_not":false,"summary":null,"term":"GO:0140538"},{"annotations":[95484],"is_not":false,"summary":null,"term":"GO:1905191"}],"cellular_component":[{"annotations":[95476],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[95477],"is_not":false,"summary":null,"term":"GO:0033620"},{"annotations":[95478],"is_not":false,"summary":null,"term":"GO:0000228"},{"annotations":[95480],"is_not":false,"summary":null,"term":"GO:0034064"}],"molecular_function":[{"annotations":[95485],"is_not":false,"summary":null,"term":"GO:0106222"},{"annotations":[95486],"is_not":false,"summary":null,"term":"GO:0008266"},{"annotations":[95487],"is_not":false,"summary":null,"term":"GO:0140311"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00145","InterPro:IPR007201","InterPro:IPR012677","InterPro:IPR034862","InterPro:IPR035979","GOA:B6JXK3","UniProtKB/TrEMBL:B6JXK3","EnsemblGenomes-Tr:EEB05147","InterPro:IPR000504"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":121,"start":33}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mcs6","uniquename":"SJAG_00150"},{"name":"meu22","uniquename":"SJAG_00149"},{"name":"mrps26","uniquename":"SJAG_00148"},{"name":"smd1","uniquename":"SJAG_00147"},{"name":"apc14","uniquename":"SJAG_00146"},{"name":"mei2","uniquename":"SJAG_00145"},{"name":"grp1","uniquename":"SJAG_00144"},{"name":"ric1","uniquename":"SJAG_00143"},{"name":"ckb1","uniquename":"SJAG_00142"},{"name":"but1","uniquename":"SJAG_00141"},{"name":"ssm4","uniquename":"SJAG_00140"}],"genes_by_uniquename":{"SJAG_00145":null,"SPAC27D7.03c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":303,"start":239}],"match_end":303,"match_start":239,"name":"RRM_1"},{"dbname":"PFAM","description":"RNA recognition motif 2","id":"PF04059","interpro_description":"Mei2-like, C-terminal RNA recognition motif","interpro_id":"IPR007201","interpro_name":"Mei2-like_Rrm_C","locations":[{"end":728,"start":632}],"match_end":728,"match_start":632,"name":"RRM_2"},{"dbname":"CDD","description":"RRM3_MEI2_fungi","id":"cd12532","interpro_description":"Fungal Mei2-like, RNA recognition motif 3","interpro_id":"IPR034862","interpro_name":"Fungal_Mei2-like_RRM3","locations":[{"end":721,"start":632}],"match_end":721,"match_start":632,"name":"RRM3_MEI2_fungi"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":312,"start":237}],"match_end":312,"match_start":237,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":308,"start":238},{"end":404,"start":336}],"match_end":404,"match_start":238,"name":"rrm1_1"},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":408,"start":236},{"end":718,"start":634}],"match_end":718,"match_start":236,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":324,"start":229},{"end":426,"start":332}],"match_end":426,"match_start":229},{"dbname":"PANTHER","id":"PTHR23189","locations":[{"end":745,"start":48}],"match_end":745,"match_start":48,"name":"RNA RECOGNITION MOTIF-CONTAINING"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":121,"start":33}],"match_end":121,"match_start":33,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":43,"start":33},{"end":70,"start":55},{"end":120,"start":97}],"match_end":120,"match_start":33,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":80,"start":71}],"match_end":80,"match_start":71,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3960288,"start_pos":3957642,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":42,"start":28}},{"range":{"end":69,"start":54}},{"range":{"end":119,"start":96}},{"range":{"end":160,"start":144}},{"range":{"end":209,"start":192}},{"range":{"end":425,"start":403}}],"name":"mei2","ortholog_annotations":[{"gene_uniquename":"SJAG_00145","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC27D7.03c","reference_uniquename":"PMID:21511999"}],"product":"RNA-binding protein involved in meiosis Mei2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008266","GO:0106222"],"not-binding":["GO:0140311"]}},"subset_termids":["GO:0005634","GO:0140313","GO:0005829","GO:0140311","GO:0005694","GO:0000747"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000228":null,"GO:0005829":null,"GO:0008266":null,"GO:0033620":null,"GO:0034064":null,"GO:0051728":null,"GO:0106222":null,"GO:0140311":null,"GO:0140538":null,"GO:1905191":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00145.1"],"transcripts_by_uniquename":{"SJAG_00145.1":null},"uniprot_identifier":"B6JXK3","uniquename":"SJAG_00145"}


id: SJAG_00146
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95491],"is_not":false,"summary":null,"term":"GO:0031145"},{"annotations":[95492],"is_not":false,"summary":null,"term":"GO:0051306"}],"cellular_component":[{"annotations":[95488],"is_not":false,"summary":null,"term":"GO:0005680"},{"annotations":[95489],"is_not":false,"summary":null,"term":"GO:0072324"},{"annotations":[95490],"is_not":false,"summary":null,"term":"GO:0005737"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05148","EnsemblGenomes-Gn:SJAG_00146","UniProtKB/TrEMBL:B6JXK4"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":42,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00151"},{"name":"mcs6","uniquename":"SJAG_00150"},{"name":"meu22","uniquename":"SJAG_00149"},{"name":"mrps26","uniquename":"SJAG_00148"},{"name":"smd1","uniquename":"SJAG_00147"},{"name":"apc14","uniquename":"SJAG_00146"},{"name":"mei2","uniquename":"SJAG_00145"},{"name":"grp1","uniquename":"SJAG_00144"},{"name":"ric1","uniquename":"SJAG_00143"},{"name":"ckb1","uniquename":"SJAG_00142"},{"name":"but1","uniquename":"SJAG_00141"}],"genes_by_uniquename":{"SJAG_00146":null,"SPAC27D7.05c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":42,"start":1}],"match_end":42,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":11,"start":1}],"match_end":11,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3955837,"start_pos":3955469,"strand":"forward"},"name":"apc14","ortholog_annotations":[{"gene_uniquename":"SJAG_00146","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC27D7.05c","reference_uniquename":"PMID:21511999"}],"product":"anaphase-promoting complex subunit Apc14","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0000070","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005680":null,"GO:0005737":null,"GO:0031145":null,"GO:0051306":null,"GO:0072324":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00146.1"],"transcripts_by_uniquename":{"SJAG_00146.1":null},"uniprot_identifier":"B6JXK4","uniquename":"SJAG_00146"}


id: SJAG_00147
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95507],"is_not":false,"summary":null,"term":"GO:0000395"},{"annotations":[77424],"is_not":false,"summary":null,"term":"GO:0000387"}],"cellular_component":[{"annotations":[77433],"is_not":false,"summary":null,"term":"GO:0071013"},{"annotations":[77425],"is_not":false,"summary":null,"term":"GO:0000243"},{"annotations":[95495],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77430],"is_not":false,"summary":null,"term":"GO:0034715"},{"annotations":[95498],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[77432],"is_not":false,"summary":null,"term":"GO:0071011"},{"annotations":[77431],"is_not":false,"summary":null,"term":"GO:0034719"},{"annotations":[77427],"is_not":false,"summary":null,"term":"GO:0005685"},{"annotations":[77428],"is_not":false,"summary":null,"term":"GO:0005686"},{"annotations":[95503],"is_not":false,"summary":null,"term":"GO:0071004"},{"annotations":[77429],"is_not":false,"summary":null,"term":"GO:0005687"},{"annotations":[95505],"is_not":false,"summary":null,"term":"GO:0046540"},{"annotations":[77426],"is_not":false,"summary":null,"term":"GO:0005682"}],"molecular_function":[{"annotations":[95510],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00147","InterPro:IPR010920","InterPro:IPR027141","InterPro:IPR001163","UniProtKB/TrEMBL:B6JXK5","GOA:B6JXK5","InterPro:IPR034102","EnsemblGenomes-Tr:EEB05149"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":114,"start":80}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"end4","uniquename":"SJAG_00152"},{"uniquename":"SJAG_00151"},{"name":"mcs6","uniquename":"SJAG_00150"},{"name":"meu22","uniquename":"SJAG_00149"},{"name":"mrps26","uniquename":"SJAG_00148"},{"name":"smd1","uniquename":"SJAG_00147"},{"name":"apc14","uniquename":"SJAG_00146"},{"name":"mei2","uniquename":"SJAG_00145"},{"name":"grp1","uniquename":"SJAG_00144"},{"name":"ric1","uniquename":"SJAG_00143"},{"name":"ckb1","uniquename":"SJAG_00142"}],"genes_by_uniquename":{"HGNC:11158":null,"SJAG_00147":null,"SPAC27D7.07c":null,"YGR074W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"LSM domain","id":"PF01423","interpro_description":"Sm domain, eukaryotic/archaea-type","interpro_id":"IPR001163","interpro_name":"Sm_dom_euk/arc","locations":[{"end":69,"start":5}],"match_end":69,"match_start":5,"name":"LSM"},{"dbname":"CDD","description":"Sm_D1","id":"cd01724","interpro_description":"Small nuclear ribonucleoprotein D1","interpro_id":"IPR034102","interpro_name":"Sm_D1","locations":[{"end":93,"start":2}],"match_end":93,"match_start":2,"name":"Sm_D1"},{"dbname":"PROSITE_PROFILES","description":"Sm domain profile.","id":"PS52002","interpro_description":"Sm domain","interpro_id":"IPR047575","interpro_name":"Sm","locations":[{"end":74,"start":2}],"match_end":74,"match_start":2,"name":"SM"},{"dbname":"SMART","id":"SM00651","interpro_description":"Sm domain, eukaryotic/archaea-type","interpro_id":"IPR001163","interpro_name":"Sm_dom_euk/arc","locations":[{"end":70,"start":5}],"match_end":70,"match_start":5,"name":"Sm3"},{"dbname":"FUNFAM","description":"Small nuclear ribonucleoprotein Sm D1","id":"G3DSA:2.30.30.100:FF:000016","locations":[{"end":83,"start":1}],"match_end":83,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF50182","interpro_description":"LSM domain superfamily","interpro_id":"IPR010920","interpro_name":"LSM_dom_sf","locations":[{"end":113,"start":4}],"match_end":113,"match_start":4,"name":"Sm-like ribonucleoproteins"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.100","locations":[{"end":85,"start":1}],"match_end":85,"match_start":1},{"dbname":"PANTHER","id":"PTHR23338","interpro_description":"Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3","interpro_id":"IPR027141","interpro_name":"LSm4/Sm_D1/D3","locations":[{"end":111,"start":4}],"match_end":111,"match_start":4,"name":"SMALL NUCLEAR RIBONUCLEOPROTEIN SM"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":114,"start":80}],"match_end":114,"match_start":80,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":114,"start":87}],"match_end":114,"match_start":87,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3955186,"start_pos":3954755,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":112,"start":94}}],"name":"smd1","ortholog_annotations":[{"gene_uniquename":"SJAG_00147","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11158","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00147","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC27D7.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00147","ortholog_taxonid":4932,"ortholog_uniquename":"YGR074W","reference_uniquename":"PMID:29761456"}],"product":"Sm snRNP core protein Smd1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729"]}},"subset_termids":["GO:0016071","GO:0005634","GO:0065003","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000243":null,"GO:0000387":null,"GO:0000395":null,"GO:0003729":null,"GO:0005682":null,"GO:0005685":null,"GO:0005686":null,"GO:0005687":null,"GO:0005829":null,"GO:0034715":null,"GO:0034719":null,"GO:0046540":null,"GO:0071004":null,"GO:0071011":null,"GO:0071013":null,"GO:0071014":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00147.1"],"transcripts_by_uniquename":{"SJAG_00147.1":null},"uniprot_identifier":"B6JXK5","uniquename":"SJAG_00147"}


id: SJAG_00148
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106363],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[106361],"is_not":false,"summary":null,"term":"GO:0005763"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00148","UniProtKB/TrEMBL:B6JXK6","EnsemblGenomes-Tr:EEB05150"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rev3","uniquename":"SJAG_00153"},{"name":"end4","uniquename":"SJAG_00152"},{"uniquename":"SJAG_00151"},{"name":"mcs6","uniquename":"SJAG_00150"},{"name":"meu22","uniquename":"SJAG_00149"},{"name":"mrps26","uniquename":"SJAG_00148"},{"name":"smd1","uniquename":"SJAG_00147"},{"name":"apc14","uniquename":"SJAG_00146"},{"name":"mei2","uniquename":"SJAG_00145"},{"name":"grp1","uniquename":"SJAG_00144"},{"name":"ric1","uniquename":"SJAG_00143"}],"genes_by_uniquename":{"HGNC:14045":null,"SJAG_00148":null,"SPBC19F8.05":null,"YOR158W":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":3954580,"start_pos":3953987,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":118,"start":100}},{"range":{"end":169,"start":157}}],"name":"mrps26","ortholog_annotations":[{"gene_uniquename":"SJAG_00148","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14045","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00148","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19F8.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00148","ortholog_taxonid":4932,"ortholog_uniquename":"YOR158W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit S26","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005739","GO:0140053"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005763":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00148.1"],"transcripts_by_uniquename":{"SJAG_00148.1":null},"uniprot_identifier":"B6JXK6","uniquename":"SJAG_00148"}


id: SJAG_00149
data:
  {"cv_annotations":{"biological_process":[{"annotations":[80254],"is_not":false,"summary":null,"term":"GO:0003333"}],"cellular_component":[{"annotations":[106364],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[80253],"is_not":false,"summary":null,"term":"GO:0015171"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JXK7","GOA:B6JXK7","InterPro:IPR004841","EnsemblGenomes-Gn:SJAG_00149","EnsemblGenomes-Tr:EEB05151","InterPro:IPR002293","InterPro:IPR004840"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rim2","uniquename":"SJAG_00154"},{"name":"rev3","uniquename":"SJAG_00153"},{"name":"end4","uniquename":"SJAG_00152"},{"uniquename":"SJAG_00151"},{"name":"mcs6","uniquename":"SJAG_00150"},{"name":"meu22","uniquename":"SJAG_00149"},{"name":"mrps26","uniquename":"SJAG_00148"},{"name":"smd1","uniquename":"SJAG_00147"},{"name":"apc14","uniquename":"SJAG_00146"},{"name":"mei2","uniquename":"SJAG_00145"},{"name":"grp1","uniquename":"SJAG_00144"}],"genes_by_uniquename":{"HGNC:11064":null,"HGNC:11066":null,"HGNC:23092":null,"SJAG_00149":null,"SPBC19F8.06c":null,"YBR068C":null,"YBR069C":null,"YCL025C":null,"YDR046C":null,"YDR508C":null,"YGR191W":null,"YKR039W":null,"YNL268W":null,"YNL270C":null,"YOL020W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Amino acid permease","id":"PF00324","interpro_description":"Amino acid permease/ SLC12A domain","interpro_id":"IPR004841","interpro_name":"AA-permease/SLC12A_dom","locations":[{"end":529,"start":72}],"match_end":529,"match_start":72,"name":"AA_permease"},{"dbname":"PROSITE_PATTERNS","description":"Amino acid permeases signature.","id":"PS00218","interpro_description":"Amino acid permease, conserved site","interpro_id":"IPR004840","interpro_name":"Amino_acid_permease_CS","locations":[{"end":128,"start":97}],"match_end":128,"match_start":97,"name":"AMINO_ACID_PERMEASE_1"},{"dbname":"FUNFAM","description":"Amino acid permease","id":"G3DSA:1.20.1740.10:FF:000001","locations":[{"end":532,"start":63}],"match_end":532,"match_start":63},{"dbname":"GENE3D","id":"G3DSA:1.20.1740.10","locations":[{"end":535,"start":63}],"match_end":535,"match_start":63,"name":"Amino acid/polyamine transporter I"},{"dbname":"PANTHER","id":"PTHR43341","interpro_description":"Amino Acid-Polyamine-Organocation Superfamily YAT","interpro_id":"IPR050524","interpro_name":"APC_YAT","locations":[{"end":543,"start":55}],"match_end":543,"match_start":55,"name":"AMINO ACID PERMEASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3953802,"start_pos":3952045,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":232,"start":214}}],"name":"meu22","ortholog_annotations":[{"gene_uniquename":"SJAG_00149","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11064","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11066","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23092","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19F8.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":4932,"ortholog_uniquename":"YBR068C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":4932,"ortholog_uniquename":"YBR069C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":4932,"ortholog_uniquename":"YCL025C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":4932,"ortholog_uniquename":"YDR046C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":4932,"ortholog_uniquename":"YDR508C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":4932,"ortholog_uniquename":"YGR191W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":4932,"ortholog_uniquename":"YKR039W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":4932,"ortholog_uniquename":"YNL268W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":4932,"ortholog_uniquename":"YNL270C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00149","ortholog_taxonid":4932,"ortholog_uniquename":"YOL020W","reference_uniquename":"PMID:29761456"}],"product":"plasma membrane amino acid transmembrane transporter Meu22","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0015171"]}},"subset_termids":["GO:0055085","GO:0022857","GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003333":null,"GO:0005886":null,"GO:0015171":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":95,"start":76}},{"assigned_by":"TMHMM","range":{"end":127,"start":105}},{"assigned_by":"TMHMM","range":{"end":162,"start":140}},{"assigned_by":"TMHMM","range":{"end":199,"start":177}},{"assigned_by":"TMHMM","range":{"end":228,"start":206}},{"assigned_by":"TMHMM","range":{"end":280,"start":258}},{"assigned_by":"TMHMM","range":{"end":320,"start":301}},{"assigned_by":"TMHMM","range":{"end":372,"start":350}},{"assigned_by":"TMHMM","range":{"end":418,"start":399}},{"assigned_by":"TMHMM","range":{"end":444,"start":422}},{"assigned_by":"TMHMM","range":{"end":495,"start":473}},{"assigned_by":"TMHMM","range":{"end":524,"start":505}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00149.1"],"transcripts_by_uniquename":{"SJAG_00149.1":null},"uniprot_identifier":"B6JXK7","uniquename":"SJAG_00149"}


id: SJAG_00150
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":134,"start":134}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":26,"start":18}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":41,"start":41}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":42,"start":42}}],"cv_annotations":{"biological_process":[{"annotations":[106373],"is_not":false,"summary":null,"term":"GO:0032968"},{"annotations":[106374],"is_not":false,"summary":null,"term":"GO:0060261"}],"cellular_component":[{"annotations":[106367],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[106369],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76593],"is_not":false,"summary":null,"term":"GO:0070985"}],"molecular_function":[{"annotations":[64884],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[76588],"is_not":false,"summary":null,"term":"GO:0004693"},{"annotations":[106381],"is_not":false,"summary":null,"term":"GO:0140836"},{"annotations":[106382],"is_not":false,"summary":null,"term":"GO:0016251"}]},"dbxrefs":["InterPro:IPR037770","InterPro:IPR000719","InterPro:IPR011009","InterPro:IPR017441","EnsemblGenomes-Tr:EEB05152","InterPro:IPR008271","EnsemblGenomes-Gn:SJAG_00150","GOA:B6JXK8","UniProtKB/TrEMBL:B6JXK8"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl21b","uniquename":"SJAG_00155"},{"name":"rim2","uniquename":"SJAG_00154"},{"name":"rev3","uniquename":"SJAG_00153"},{"name":"end4","uniquename":"SJAG_00152"},{"uniquename":"SJAG_00151"},{"name":"mcs6","uniquename":"SJAG_00150"},{"name":"meu22","uniquename":"SJAG_00149"},{"name":"mrps26","uniquename":"SJAG_00148"},{"name":"smd1","uniquename":"SJAG_00147"},{"name":"apc14","uniquename":"SJAG_00146"},{"name":"mei2","uniquename":"SJAG_00145"}],"genes_by_uniquename":{"HGNC:1778":null,"SJAG_00150":null,"SPBC19F8.07":null,"YDL108W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":293,"start":12}],"match_end":293,"match_start":12,"name":"Pkinase"},{"dbname":"CDD","description":"STKc_CDK7","id":"cd07841","interpro_description":"Cyclin-dependent kinase 7","interpro_id":"IPR037770","interpro_name":"CDK7","locations":[{"end":306,"start":12}],"match_end":306,"match_start":12,"name":"STKc_CDK7"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":142,"start":130}],"match_end":142,"match_start":130,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PATTERNS","description":"Protein kinases ATP-binding region signature.","id":"PS00107","interpro_description":"Protein kinase, ATP binding site","interpro_id":"IPR017441","interpro_name":"Protein_kinase_ATP_BS","locations":[{"end":42,"start":18}],"match_end":42,"match_start":18,"name":"PROTEIN_KINASE_ATP"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":293,"start":12}],"match_end":293,"match_start":12,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":293,"start":12}],"match_end":293,"match_start":12,"name":"serkin_6"},{"dbname":"FUNFAM","description":"CMGC/CDK/CDK7 protein kinase","id":"G3DSA:3.30.200.20:FF:000554","locations":[{"end":92,"start":8}],"match_end":92,"match_start":8},{"dbname":"FUNFAM","description":"Putative cyclin-dependent kinase 7","id":"G3DSA:1.10.510.10:FF:000097","locations":[{"end":309,"start":93}],"match_end":309,"match_start":93},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":297,"start":11}],"match_end":297,"match_start":11,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":92,"start":2}],"match_end":92,"match_start":2,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":307,"start":93}],"match_end":307,"match_start":93,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"PANTHER","id":"PTHR24056","interpro_description":"Cyclin-dependent kinase","interpro_id":"IPR050108","interpro_name":"CDK","locations":[{"end":297,"start":12}],"match_end":297,"match_start":12,"name":"CELL DIVISION PROTEIN KINASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3951477,"start_pos":3950473,"strand":"reverse"},"name":"mcs6","ortholog_annotations":[{"gene_uniquename":"SJAG_00150","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1778","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00150","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19F8.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00150","ortholog_taxonid":4932,"ortholog_uniquename":"YDL108W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00150","ortholog_taxonid":4932,"ortholog_uniquename":"YDL108W","reference_uniquename":"PMID:26896847"}],"product":"transcription factor TFIIH associated cyclin-dependent protein kinase Mcs6","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004693","GO:0140836","GO:0016251"]}},"subset_termids":["GO:0140223","GO:0004672","GO:0005634","GO:0016301","GO:0005829","GO:0006355","GO:0006351","GO:0140096","GO:0005654","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0004693":null,"GO:0005524":null,"GO:0005829":null,"GO:0016251":null,"GO:0032968":null,"GO:0060261":null,"GO:0070985":null,"GO:0140836":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00150.1"],"transcripts_by_uniquename":{"SJAG_00150.1":null},"uniprot_identifier":"B6JXK8","uniquename":"SJAG_00150"}


id: SJAG_00151
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[99651],"is_not":false,"summary":null,"term":"GO:0005783"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00151","GOA:B6JXK9","EnsemblGenomes-Tr:EEB05153","UniProtKB/TrEMBL:B6JXK9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"srb8","uniquename":"SJAG_00156"},{"name":"rpl21b","uniquename":"SJAG_00155"},{"name":"rim2","uniquename":"SJAG_00154"},{"name":"rev3","uniquename":"SJAG_00153"},{"name":"end4","uniquename":"SJAG_00152"},{"uniquename":"SJAG_00151"},{"name":"mcs6","uniquename":"SJAG_00150"},{"name":"meu22","uniquename":"SJAG_00149"},{"name":"mrps26","uniquename":"SJAG_00148"},{"name":"smd1","uniquename":"SJAG_00147"},{"name":"apc14","uniquename":"SJAG_00146"}],"genes_by_uniquename":{"SJAG_00151":null,"SPAC688.12c":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":3950299,"start_pos":3949832,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00151","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC688.12c","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":43,"start":26}},{"assigned_by":"TMHMM","range":{"end":81,"start":63}},{"assigned_by":"TMHMM","range":{"end":125,"start":103}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00151.1"],"transcripts_by_uniquename":{"SJAG_00151.1":null},"uniprot_identifier":"B6JXK9","uniquename":"SJAG_00151"}


id: SJAG_00152
data:
  {"coiled_coil_coords":[{"range":{"end":424,"start":342}},{"range":{"end":566,"start":441}},{"range":{"end":598,"start":571}},{"range":{"end":894,"start":871}},{"range":{"end":1097,"start":1077}}],"cv_annotations":{"biological_process":[{"annotations":[78081],"is_not":false,"summary":null,"term":"GO:0048268"},{"annotations":[78079],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[99646],"is_not":false,"summary":null,"term":"GO:0030950"}],"cellular_component":[{"annotations":[78076],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[99635],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[78075],"is_not":false,"summary":null,"term":"GO:0030136"},{"annotations":[99640],"is_not":false,"summary":null,"term":"GO:0031097"},{"annotations":[99641],"is_not":false,"summary":null,"term":"GO:0035841"},{"annotations":[99642],"is_not":false,"summary":null,"term":"GO:0035840"}],"molecular_function":[{"annotations":[78080],"is_not":false,"summary":null,"term":"GO:0051015"},{"annotations":[78073],"is_not":false,"summary":null,"term":"GO:0035615"},{"annotations":[78072],"is_not":false,"summary":null,"term":"GO:0032051"},{"annotations":[99648],"is_not":false,"summary":null,"term":"GO:0106006"},{"annotations":[78074],"is_not":false,"summary":null,"term":"GO:0043325"},{"annotations":[78078],"is_not":false,"summary":null,"term":"GO:0080025"}]},"dbxrefs":["InterPro:IPR030224","InterPro:IPR013809","InterPro:IPR002558","EnsemblGenomes-Gn:SJAG_00152","UniProtKB/TrEMBL:B6JXL0","InterPro:IPR011417","GOA:B6JXL0","InterPro:IPR008942","InterPro:IPR035964","EnsemblGenomes-Tr:EEB05154"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":321,"start":264}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rng10","uniquename":"SJAG_05179"},{"name":"srb8","uniquename":"SJAG_00156"},{"name":"rpl21b","uniquename":"SJAG_00155"},{"name":"rim2","uniquename":"SJAG_00154"},{"name":"rev3","uniquename":"SJAG_00153"},{"name":"end4","uniquename":"SJAG_00152"},{"uniquename":"SJAG_00151"},{"name":"mcs6","uniquename":"SJAG_00150"},{"name":"meu22","uniquename":"SJAG_00149"},{"name":"mrps26","uniquename":"SJAG_00148"},{"name":"smd1","uniquename":"SJAG_00147"}],"genes_by_uniquename":{"HGNC:18415":null,"HGNC:4913":null,"SJAG_00152":null,"SPAC688.11":null,"YNL243W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ANTH domain","id":"PF07651","interpro_description":"AP180 N-terminal homology (ANTH) domain","interpro_id":"IPR011417","interpro_name":"ANTH_dom","locations":[{"end":269,"start":16}],"match_end":269,"match_start":16,"name":"ANTH"},{"dbname":"PFAM","description":"I/LWEQ domain","id":"PF01608","interpro_description":"I/LWEQ domain","interpro_id":"IPR002558","interpro_name":"ILWEQ_dom","locations":[{"end":1100,"start":950}],"match_end":1100,"match_start":950,"name":"I_LWEQ"},{"dbname":"CDD","description":"ANTH_N_Sla2p","id":"cd17007","locations":[{"end":130,"start":16}],"match_end":130,"match_start":16,"name":"ANTH_N_Sla2p"},{"dbname":"PROSITE_PROFILES","description":"ENTH domain profile.","id":"PS50942","interpro_description":"ENTH domain","interpro_id":"IPR013809","interpro_name":"ENTH","locations":[{"end":137,"start":8}],"match_end":137,"match_start":8,"name":"ENTH"},{"dbname":"PROSITE_PROFILES","description":"I/LWEQ domain profile.","id":"PS50945","interpro_description":"I/LWEQ domain","interpro_id":"IPR002558","interpro_name":"ILWEQ_dom","locations":[{"end":1102,"start":858}],"match_end":1102,"match_start":858,"name":"I_LWEQ"},{"dbname":"SMART","id":"SM00307","interpro_description":"I/LWEQ domain","interpro_id":"IPR002558","interpro_name":"ILWEQ_dom","locations":[{"end":1102,"start":902}],"match_end":1102,"match_start":902,"name":"ILWEQ_1"},{"dbname":"SMART","id":"SM00273","interpro_description":"ENTH domain","interpro_id":"IPR013809","interpro_name":"ENTH","locations":[{"end":137,"start":14}],"match_end":137,"match_start":14,"name":"enth_2"},{"dbname":"SUPERFAMILY","id":"SSF48464","interpro_description":"ENTH/VHS","interpro_id":"IPR008942","interpro_name":"ENTH_VHS","locations":[{"end":132,"start":14}],"match_end":132,"match_start":14,"name":"ENTH/VHS domain"},{"dbname":"SUPERFAMILY","id":"SSF89009","locations":[{"end":268,"start":165}],"match_end":268,"match_start":165,"name":"GAT-like domain"},{"dbname":"SUPERFAMILY","id":"SSF109885","interpro_description":"I/LWEQ domain superfamily","interpro_id":"IPR035964","interpro_name":"I/LWEQ_dom_sf","locations":[{"end":1048,"start":863}],"match_end":1048,"match_start":863,"name":"I/LWEQ domain"},{"dbname":"GENE3D","id":"G3DSA:1.20.1410.10","locations":[{"end":1061,"start":853}],"match_end":1061,"match_start":853,"name":"I/LWEQ domain"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.90","interpro_description":"ENTH/VHS","interpro_id":"IPR008942","interpro_name":"ENTH_VHS","locations":[{"end":134,"start":3}],"match_end":134,"match_start":3},{"dbname":"PANTHER","id":"PTHR10407","interpro_description":"Sla2 family","interpro_id":"IPR030224","interpro_name":"Sla2_fam","locations":[{"end":1101,"start":5}],"match_end":1101,"match_start":5,"name":"HUNTINGTIN INTERACTING PROTEIN 1"},{"dbname":"COILS","id":"Coil","locations":[{"end":424,"start":342},{"end":566,"start":441},{"end":598,"start":571},{"end":894,"start":871},{"end":1097,"start":1077}],"match_end":1097,"match_start":342,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":321,"start":264}],"match_end":321,"match_start":264,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3949535,"start_pos":3946221,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":364,"start":337}},{"range":{"end":379,"start":367}},{"range":{"end":418,"start":391}},{"range":{"end":1007,"start":998}}],"name":"end4","ortholog_annotations":[{"gene_uniquename":"SJAG_00152","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18415","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00152","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4913","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00152","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC688.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00152","ortholog_taxonid":4932,"ortholog_uniquename":"YNL243W","reference_uniquename":"PMID:29761456"}],"product":"clathrin adaptor End4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0032051","GO:0043325","GO:0051015","GO:0080025"],"not-binding":["GO:0035615","GO:0106006"]}},"subset_termids":["GO:0015629","GO:0005938","GO:0030036","GO:0031410","GO:0030479","GO:0060090","GO:0003779","GO:0016192","GO:0007163","GO:0065003","GO:0008289"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006897":null,"GO:0030136":null,"GO:0030479":null,"GO:0030950":null,"GO:0031097":null,"GO:0032051":null,"GO:0035615":null,"GO:0035840":null,"GO:0035841":null,"GO:0043325":null,"GO:0048268":null,"GO:0051015":null,"GO:0051285":null,"GO:0080025":null,"GO:0106006":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00152.1"],"transcripts_by_uniquename":{"SJAG_00152.1":null},"uniprot_identifier":"B6JXL0","uniquename":"SJAG_00152"}


id: SJAG_00153
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78039],"is_not":false,"summary":null,"term":"GO:0000724"},{"annotations":[99627],"is_not":false,"summary":null,"term":"GO:0070987"},{"annotations":[78037],"is_not":false,"summary":null,"term":"GO:0042276"},{"annotations":[99629],"is_not":false,"summary":null,"term":"GO:0043504"}],"cellular_component":[{"annotations":[99622],"is_not":false,"summary":null,"term":"GO:0000262"},{"annotations":[99623],"is_not":false,"summary":null,"term":"GO:0043596"},{"annotations":[78038],"is_not":false,"summary":null,"term":"GO:0016035"}],"molecular_function":[{"annotations":[66675],"is_not":false,"summary":null,"term":"GO:0051539"},{"annotations":[66669],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[78036],"is_not":false,"summary":null,"term":"GO:0003887"},{"annotations":[66673],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR042087","EnsemblGenomes-Tr:EEB05155","InterPro:IPR023211","InterPro:IPR025687","UniProtKB/TrEMBL:B6JXL1","InterPro:IPR006172","InterPro:IPR006133","InterPro:IPR036397","InterPro:IPR006134","InterPro:IPR012337","EnsemblGenomes-Gn:SJAG_00153","GOA:B6JXL1","InterPro:IPR017964","InterPro:IPR030559"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":446,"start":372}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"slx4","uniquename":"SJAG_05180"},{"name":"rng10","uniquename":"SJAG_05179"},{"name":"srb8","uniquename":"SJAG_00156"},{"name":"rpl21b","uniquename":"SJAG_00155"},{"name":"rim2","uniquename":"SJAG_00154"},{"name":"rev3","uniquename":"SJAG_00153"},{"name":"end4","uniquename":"SJAG_00152"},{"uniquename":"SJAG_00151"},{"name":"mcs6","uniquename":"SJAG_00150"},{"name":"meu22","uniquename":"SJAG_00149"},{"name":"mrps26","uniquename":"SJAG_00148"}],"genes_by_uniquename":{"HGNC:9968":null,"SJAG_00153":null,"SPAC688.10":null,"YPL167C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DNA polymerase family B, exonuclease domain","id":"PF03104","interpro_description":"DNA-directed DNA polymerase, family B, exonuclease domain","interpro_id":"IPR006133","interpro_name":"DNA-dir_DNA_pol_B_exonuc","locations":[{"end":806,"start":686}],"match_end":806,"match_start":686,"name":"DNA_pol_B_exo1"},{"dbname":"PFAM","description":"DNA polymerase delta catalytic subunit-like, N-terminal domain","id":"PF24055","interpro_description":"DNA polymerase delta/zeta catalytic subunit, N-terminal domain","interpro_id":"IPR056435","interpro_name":"DPOD/Z_N","locations":[{"end":145,"start":61}],"match_end":145,"match_start":61,"name":"POL3_N"},{"dbname":"PFAM","description":"C4-type zinc-finger of DNA polymerase delta","id":"PF14260","interpro_description":"C4-type zinc-finger of DNA polymerase delta","interpro_id":"IPR025687","interpro_name":"Znf-C4pol","locations":[{"end":1441,"start":1364}],"match_end":1441,"match_start":1364,"name":"zf-C4pol"},{"dbname":"PFAM","description":"DNA polymerase family B","id":"PF00136","interpro_description":"DNA-directed DNA polymerase, family B, multifunctional domain","interpro_id":"IPR006134","interpro_name":"DNA-dir_DNA_pol_B_multi_dom","locations":[{"end":1318,"start":873}],"match_end":1318,"match_start":873,"name":"DNA_pol_B"},{"dbname":"CDD","description":"POLBc_zeta","id":"cd05534","locations":[{"end":1323,"start":880}],"match_end":1323,"match_start":880,"name":"POLBc_zeta"},{"dbname":"CDD","description":"DNA_polB_zeta_exo","id":"cd05778","locations":[{"end":853,"start":629}],"match_end":853,"match_start":629,"name":"DNA_polB_zeta_exo"},{"dbname":"PROSITE_PATTERNS","description":"DNA polymerase family B signature.","id":"PS00116","interpro_description":"DNA-directed DNA polymerase, family B, conserved site","interpro_id":"IPR017964","interpro_name":"DNA-dir_DNA_pol_B_CS","locations":[{"end":1106,"start":1098}],"match_end":1106,"match_start":1098,"name":"DNA_POLYMERASE_B"},{"dbname":"SMART","id":"SM00486","interpro_description":"DNA-directed DNA polymerase, family B","interpro_id":"IPR006172","interpro_name":"DNA-dir_DNA_pol_B","locations":[{"end":1110,"start":628}],"match_end":1110,"match_start":628,"name":"polmehr3"},{"dbname":"PRINTS","description":"DNA-directed DNA-polymerase family B signature","id":"PR00106","interpro_description":"DNA-directed DNA polymerase, family B","interpro_id":"IPR006172","interpro_name":"DNA-dir_DNA_pol_B","locations":[{"end":945,"start":932},{"end":1052,"start":1040},{"end":1104,"start":1096}],"match_end":1104,"match_start":932,"name":"DNAPOLB"},{"dbname":"FUNFAM","description":"DNA polymerase zeta","id":"G3DSA:1.10.287.690:FF:000002","locations":[{"end":1057,"start":1000}],"match_end":1057,"match_start":1000},{"dbname":"FUNFAM","description":"DNA polymerase","id":"G3DSA:1.10.132.60:FF:000007","locations":[{"end":1339,"start":1173}],"match_end":1339,"match_start":1173},{"dbname":"SUPERFAMILY","id":"SSF56672","interpro_description":"DNA/RNA polymerase superfamily","interpro_id":"IPR043502","interpro_name":"DNA/RNA_pol_sf","locations":[{"end":1330,"start":919}],"match_end":1330,"match_start":919,"name":"DNA/RNA polymerases"},{"dbname":"SUPERFAMILY","id":"SSF53098","interpro_description":"Ribonuclease H-like superfamily","interpro_id":"IPR012337","interpro_name":"RNaseH-like_sf","locations":[{"end":187,"start":40},{"end":901,"start":615}],"match_end":901,"match_start":40,"name":"Ribonuclease H-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.690","locations":[{"end":1057,"start":999}],"match_end":1057,"match_start":999,"name":"Helix hairpin bin"},{"dbname":"GENE3D","id":"G3DSA:1.10.132.60","interpro_description":"DNA polymerase family B, thumb domain","interpro_id":"IPR042087","interpro_name":"DNA_pol_B_thumb","locations":[{"end":1334,"start":1174}],"match_end":1334,"match_start":1174},{"dbname":"GENE3D","id":"G3DSA:3.90.1600.10","interpro_description":"DNA polymerase, palm domain superfamily","interpro_id":"IPR023211","interpro_name":"DNA_pol_palm_dom_sf","locations":[{"end":979,"start":918},{"end":1161,"start":1060}],"match_end":1161,"match_start":918,"name":"Palm domain of DNA polymerase"},{"dbname":"GENE3D","id":"G3DSA:3.30.342.10","locations":[{"end":194,"start":30}],"match_end":194,"match_start":30,"name":"DNA Polymerase, chain B, domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.30.420.10","interpro_description":"Ribonuclease H superfamily","interpro_id":"IPR036397","interpro_name":"RNaseH_sf","locations":[{"end":915,"start":633}],"match_end":915,"match_start":633},{"dbname":"PANTHER","id":"PTHR45812","interpro_description":"DNA polymerase zeta catalytic subunit","interpro_id":"IPR030559","interpro_name":"PolZ_Rev3","locations":[{"end":295,"start":26}],"match_end":295,"match_start":26,"name":"DNA POLYMERASE ZETA CATALYTIC SUBUNIT"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":446,"start":372}],"match_end":446,"match_start":372,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":385,"start":373}],"match_end":385,"match_start":373,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":417,"start":401},{"end":446,"start":425}],"match_end":446,"match_start":401,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3945696,"start_pos":3941259,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":384,"start":372}},{"range":{"end":655,"start":645}},{"range":{"end":1412,"start":1394}}],"name":"rev3","ortholog_annotations":[{"gene_uniquename":"SJAG_00153","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9968","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00153","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC688.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00153","ortholog_taxonid":4932,"ortholog_uniquename":"YPL167C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00153","ortholog_taxonid":4932,"ortholog_uniquename":"YPL167C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial DNA polymerase, zeta catalytic subunit Rev3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270","GO:0051539","GO:0003677"],"not-binding":["GO:0003887"]}},"subset_termids":["GO:0006310","GO:0006281","GO:0016779","GO:0007005","GO:0005634","GO:0005739","GO:0005694","GO:0140097"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000262":null,"GO:0000724":null,"GO:0003677":null,"GO:0003887":null,"GO:0008270":null,"GO:0016035":null,"GO:0042276":null,"GO:0043504":null,"GO:0043596":null,"GO:0051539":null,"GO:0070987":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00153.1"],"transcripts_by_uniquename":{"SJAG_00153.1":null},"uniprot_identifier":"B6JXL1","uniquename":"SJAG_00153"}


id: SJAG_00154
data:
  {"cv_annotations":{"biological_process":[{"annotations":[79537],"is_not":false,"summary":null,"term":"GO:0000002"},{"annotations":[79538],"is_not":false,"summary":null,"term":"GO:1990519"}],"cellular_component":[{"annotations":[68628],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[79539],"is_not":false,"summary":null,"term":"GO:0015218"}],"mondo":[{"annotations":[85892],"is_not":false,"summary":null,"term":"MONDO:0859362"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JXL2","EnsemblGenomes-Gn:SJAG_00154","InterPro:IPR002067","InterPro:IPR018108","EnsemblGenomes-Tr:EEB05156","GOA:B6JXL2","InterPro:IPR023395"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gst3","uniquename":"SJAG_05181"},{"name":"slx4","uniquename":"SJAG_05180"},{"name":"rng10","uniquename":"SJAG_05179"},{"name":"srb8","uniquename":"SJAG_00156"},{"name":"rpl21b","uniquename":"SJAG_00155"},{"name":"rim2","uniquename":"SJAG_00154"},{"name":"rev3","uniquename":"SJAG_00153"},{"name":"end4","uniquename":"SJAG_00152"},{"uniquename":"SJAG_00151"},{"name":"mcs6","uniquename":"SJAG_00150"},{"name":"meu22","uniquename":"SJAG_00149"}],"genes_by_uniquename":{"HGNC:25554":null,"HGNC:29681":null,"SJAG_00154":null,"SPAC688.09":null,"YBR192W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mitochondrial carrier protein","id":"PF00153","interpro_description":"Mitochondrial substrate/solute carrier","interpro_id":"IPR018108","interpro_name":"Mitochondrial_sb/sol_carrier","locations":[{"end":121,"start":16},{"end":219,"start":129},{"end":330,"start":240}],"match_end":330,"match_start":16,"name":"Mito_carr"},{"dbname":"PROSITE_PROFILES","description":"Solute carrier (Solcar) repeat profile.","id":"PS50920","interpro_description":"Mitochondrial substrate/solute carrier","interpro_id":"IPR018108","interpro_name":"Mitochondrial_sb/sol_carrier","locations":[{"end":119,"start":15},{"end":217,"start":129},{"end":328,"start":239}],"match_end":328,"match_start":15,"name":"SOLCAR"},{"dbname":"PRINTS","description":"Mitochondrial carrier protein signature","id":"PR00926","interpro_description":"Mitochondrial carrier protein","interpro_id":"IPR002067","interpro_name":"Mit_carrier","locations":[{"end":47,"start":20},{"end":114,"start":94},{"end":162,"start":144},{"end":270,"start":248}],"match_end":270,"match_start":20,"name":"MITOCARRIER"},{"dbname":"SUPERFAMILY","id":"SSF103506","interpro_description":"Mitochondrial carrier domain superfamily","interpro_id":"IPR023395","interpro_name":"Mt_carrier_dom_sf","locations":[{"end":325,"start":17}],"match_end":325,"match_start":17,"name":"Mitochondrial carrier"},{"dbname":"GENE3D","id":"G3DSA:1.50.40.10","interpro_description":"Mitochondrial carrier domain superfamily","interpro_id":"IPR023395","interpro_name":"Mt_carrier_dom_sf","locations":[{"end":331,"start":3}],"match_end":331,"match_start":3,"name":"Mitochondrial carrier domain"},{"dbname":"PANTHER","id":"PTHR45829","interpro_description":"Solute carrier family 25 member 33/36-like","interpro_id":"IPR049562","interpro_name":"SLC25A33/36-like","locations":[{"end":329,"start":14}],"match_end":329,"match_start":14,"name":"MITOCHONDRIAL CARRIER PROTEIN RIM2"}],"location":{"chromosome_name":"supercont5.1","end_pos":3940836,"start_pos":3939779,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":16,"start":9}},{"range":{"end":258,"start":244}}],"name":"rim2","ortholog_annotations":[{"gene_uniquename":"SJAG_00154","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25554","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00154","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29681","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00154","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC688.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00154","ortholog_taxonid":4932,"ortholog_uniquename":"YBR192W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00154","ortholog_taxonid":4932,"ortholog_uniquename":"YBR192W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial carrier, pyrimidine nucleotide Rim2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0015218"]}},"subset_termids":["MONDO:0005066","GO:0007005","GO:0022857","GO:0005739","MONDO:0037792","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000002":null,"GO:0005743":null,"GO:0015218":null,"GO:1990519":null,"MONDO:0859362":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00154.1"],"transcripts_by_uniquename":{"SJAG_00154.1":null},"uniprot_identifier":"B6JXL2","uniquename":"SJAG_00154"}


id: SJAG_00155
data:
  {"coiled_coil_coords":[{"range":{"end":122,"start":102}}],"cv_annotations":{"biological_process":[{"annotations":[109861],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[75713],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[109859],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[75712],"is_not":false,"summary":null,"term":"GO:0003735"}],"mondo":[{"annotations":[86766],"is_not":false,"summary":null,"term":"MONDO:0014384"}]},"dbxrefs":["InterPro:IPR001147","UniProtKB/TrEMBL:B6JXL3","InterPro:IPR018259","EnsemblGenomes-Gn:SJAG_00155","GOA:B6JXL3","InterPro:IPR008991","InterPro:IPR036948","EnsemblGenomes-Tr:EEB05157"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00158"},{"name":"gst3","uniquename":"SJAG_05181"},{"name":"slx4","uniquename":"SJAG_05180"},{"name":"rng10","uniquename":"SJAG_05179"},{"name":"srb8","uniquename":"SJAG_00156"},{"name":"rpl21b","uniquename":"SJAG_00155"},{"name":"rim2","uniquename":"SJAG_00154"},{"name":"rev3","uniquename":"SJAG_00153"},{"name":"end4","uniquename":"SJAG_00152"},{"uniquename":"SJAG_00151"},{"name":"mcs6","uniquename":"SJAG_00150"}],"genes_by_uniquename":{"HGNC:10313":null,"SJAG_00155":null,"SPAC959.08":null,"SPBC365.03c":null,"YBR191W":null,"YPL079W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L21e","id":"PF01157","interpro_description":"Large ribosomal subunit protein eL21","interpro_id":"IPR001147","interpro_name":"Ribosomal_eL21","locations":[{"end":101,"start":1}],"match_end":101,"match_start":1,"name":"Ribosomal_L21e"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L21e signature.","id":"PS01171","interpro_description":"Large ribosomal subunit protein eL21, conserved site","interpro_id":"IPR018259","interpro_name":"Ribosomal_eL21_CS","locations":[{"end":62,"start":37}],"match_end":62,"match_start":37,"name":"RIBOSOMAL_L21E"},{"dbname":"FUNFAM","description":"60S ribosomal protein L21","id":"G3DSA:2.30.30.70:FF:000001","locations":[{"end":98,"start":1}],"match_end":98,"match_start":1},{"dbname":"FUNFAM","description":"60S ribosomal protein L21","id":"G3DSA:6.10.250.3260:FF:000001","locations":[{"end":160,"start":99}],"match_end":160,"match_start":99},{"dbname":"SUPERFAMILY","id":"SSF50104","interpro_description":"Translation protein SH3-like domain superfamily","interpro_id":"IPR008991","interpro_name":"Translation_prot_SH3-like_sf","locations":[{"end":100,"start":2}],"match_end":100,"match_start":2,"name":"Translation proteins SH3-like domain"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.70","interpro_description":"Large ribosomal subunit protein eL21 superfamily","interpro_id":"IPR036948","interpro_name":"Ribosomal_eL21_sf","locations":[{"end":98,"start":1}],"match_end":98,"match_start":1,"name":"Ribosomal protein L21"},{"dbname":"GENE3D","id":"G3DSA:6.10.250.3260","locations":[{"end":160,"start":99}],"match_end":160,"match_start":99},{"dbname":"PANTHER","id":"PTHR20981","interpro_description":"Large ribosomal subunit protein eL21","interpro_id":"IPR001147","interpro_name":"Ribosomal_eL21","locations":[{"end":159,"start":1}],"match_end":159,"match_start":1,"name":"60S RIBOSOMAL PROTEIN L21"},{"dbname":"COILS","id":"Coil","locations":[{"end":122,"start":102}],"match_end":122,"match_start":102,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3939394,"start_pos":3938912,"strand":"forward"},"name":"rpl21b","ortholog_annotations":[{"gene_uniquename":"SJAG_00155","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10313","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00155","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10313","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00155","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC959.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00155","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC365.03c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00155","ortholog_taxonid":4932,"ortholog_uniquename":"YBR191W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00155","ortholog_taxonid":4932,"ortholog_uniquename":"YBR191W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00155","ortholog_taxonid":4932,"ortholog_uniquename":"YBR191W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00155","ortholog_taxonid":4932,"ortholog_uniquename":"YPL079W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00155","ortholog_taxonid":4932,"ortholog_uniquename":"YPL079W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00155","ortholog_taxonid":4932,"ortholog_uniquename":"YPL079W","reference_uniquename":"PMID:26896847"}],"product":"60S ribosomal protein L21","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0002181","GO:0005829","GO:0030684","GO:0022626"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0022625":null,"GO:0030684":null,"MONDO:0014384":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00155.1"],"transcripts_by_uniquename":{"SJAG_00155.1":null},"uniprot_identifier":"B6JXL3","uniquename":"SJAG_00155"}


id: SJAG_00156
data:
  {"cv_annotations":{"biological_process":[{"annotations":[99615],"is_not":false,"summary":null,"term":"GO:0022408"},{"annotations":[99616],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[67352],"is_not":false,"summary":null,"term":"GO:0016592"}],"molecular_function":[{"annotations":[99617],"is_not":false,"summary":null,"term":"GO:0003713"}],"mondo":[{"annotations":[87247],"is_not":false,"summary":null,"term":"MONDO:0010477"},{"annotations":[86289],"is_not":false,"summary":null,"term":"MONDO:0012997"},{"annotations":[87456],"is_not":false,"summary":null,"term":"MONDO:0010590"},{"annotations":[85728],"is_not":false,"summary":null,"term":"MONDO:0030030"},{"annotations":[85379],"is_not":false,"summary":null,"term":"MONDO:0010655"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JXL4","GOA:B6JXL4","EnsemblGenomes-Gn:SJAG_00156","EnsemblGenomes-Tr:EEB05158","InterPro:IPR019035"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tfa2","uniquename":"SJAG_00159"},{"uniquename":"SJAG_00158"},{"name":"gst3","uniquename":"SJAG_05181"},{"name":"slx4","uniquename":"SJAG_05180"},{"name":"rng10","uniquename":"SJAG_05179"},{"name":"srb8","uniquename":"SJAG_00156"},{"name":"rpl21b","uniquename":"SJAG_00155"},{"name":"rim2","uniquename":"SJAG_00154"},{"name":"rev3","uniquename":"SJAG_00153"},{"name":"end4","uniquename":"SJAG_00152"},{"uniquename":"SJAG_00151"}],"genes_by_uniquename":{"HGNC:11957":null,"HGNC:16050":null,"SJAG_00156":null,"SPAC688.08":null,"YCR081W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Transcription mediator complex subunit Med12","id":"PF09497","interpro_description":"Mediator complex, subunit Med12","interpro_id":"IPR019035","interpro_name":"Mediator_Med12","locations":[{"end":173,"start":111}],"match_end":173,"match_start":111,"name":"Med12"},{"dbname":"SMART","id":"SM01281","interpro_description":"Mediator complex, subunit Med12","interpro_id":"IPR019035","interpro_name":"Mediator_Med12","locations":[{"end":173,"start":110}],"match_end":173,"match_start":110,"name":"Med12_2"},{"dbname":"PANTHER","id":"PTHR46567","locations":[{"end":554,"start":53}],"match_end":554,"match_start":53,"name":"MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12"}],"location":{"chromosome_name":"supercont5.1","end_pos":3938448,"start_pos":3934876,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":633,"start":621}},{"range":{"end":796,"start":782}},{"range":{"end":928,"start":915}}],"name":"srb8","ortholog_annotations":[{"gene_uniquename":"SJAG_00156","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11957","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00156","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16050","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00156","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC688.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00156","ortholog_taxonid":4932,"ortholog_uniquename":"YCR081W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00156","ortholog_taxonid":4932,"ortholog_uniquename":"YCR081W","reference_uniquename":"PMID:26896847"}],"product":"mediator complex subunit Med12","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003713"]}},"subset_termids":["GO:0007155","MONDO:0002320","GO:0060090","GO:0003713","GO:0006351","GO:0003712","GO:0005634","GO:0006355"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003713":null,"GO:0016592":null,"GO:0022408":null,"GO:0045944":null,"MONDO:0010477":null,"MONDO:0010590":null,"MONDO:0010655":null,"MONDO:0012997":null,"MONDO:0030030":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00156.1"],"transcripts_by_uniquename":{"SJAG_00156.1":null},"uniprot_identifier":"B6JXL4","uniquename":"SJAG_00156"}


id: SJAG_00158
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":224,"start":224}},{"assigned_by":"UniProtKB","range":{"end":391,"start":391}},{"assigned_by":"UniProtKB","range":{"end":417,"start":417}}],"cv_annotations":{"biological_process":[{"annotations":[115405],"is_not":false,"summary":null,"term":"GO:0008204"}],"cellular_component":[{"annotations":[115404],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[75475],"is_not":false,"summary":null,"term":"GO:0004771"}],"mondo":[{"annotations":[85659],"is_not":false,"summary":null,"term":"MONDO:0019149"},{"annotations":[85917],"is_not":false,"summary":null,"term":"MONDO:0019148"}]},"dbxrefs":["GOA:B6JXL8","EnsemblGenomes-Tr:EEB05162","InterPro:IPR000073","UniProtKB/TrEMBL:B6JXL8","InterPro:IPR025483","EnsemblGenomes-Gn:SJAG_00158","InterPro:IPR029058"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00163"},{"uniquename":"SJAG_00162"},{"uniquename":"SJAG_00161"},{"name":"clr5","uniquename":"SJAG_00160"},{"name":"tfa2","uniquename":"SJAG_00159"},{"uniquename":"SJAG_00158"},{"name":"gst3","uniquename":"SJAG_05181"},{"name":"slx4","uniquename":"SJAG_05180"},{"name":"rng10","uniquename":"SJAG_05179"},{"name":"srb8","uniquename":"SJAG_00156"},{"name":"rpl21b","uniquename":"SJAG_00155"}],"genes_by_uniquename":{"HGNC:21773":null,"HGNC:23444":null,"HGNC:23455":null,"HGNC:6617":null,"HGNC:6622":null,"SJAG_00158":null,"SPCC1672.09":null,"YKL140W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Partial alpha/beta-hydrolase lipase region","id":"PF04083","interpro_description":"Partial AB-hydrolase lipase domain","interpro_id":"IPR006693","interpro_name":"AB_hydrolase_lipase","locations":[{"end":148,"start":82}],"match_end":148,"match_start":82,"name":"Abhydro_lipase"},{"dbname":"FUNFAM","description":"Triglyceride lipase-cholesterol esterase","id":"G3DSA:3.40.50.1820:FF:000095","locations":[{"end":440,"start":72}],"match_end":440,"match_start":72},{"dbname":"SUPERFAMILY","id":"SSF53474","interpro_description":"Alpha/Beta hydrolase fold","interpro_id":"IPR029058","interpro_name":"AB_hydrolase_fold","locations":[{"end":439,"start":78}],"match_end":439,"match_start":78,"name":"alpha/beta-Hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1820","interpro_description":"Alpha/Beta hydrolase fold","interpro_id":"IPR029058","interpro_name":"AB_hydrolase_fold","locations":[{"end":440,"start":71}],"match_end":440,"match_start":71,"name":"alpha/beta hydrolase"},{"dbname":"PANTHER","id":"PTHR11005","locations":[{"end":439,"start":74}],"match_end":439,"match_start":74,"name":"LYSOSOMAL ACID LIPASE-RELATED"},{"dbname":"PIRSF","id":"PIRSF000862","interpro_description":"Lipase, eukaryotic","interpro_id":"IPR025483","interpro_name":"Lipase_euk","locations":[{"end":443,"start":35}],"match_end":443,"match_start":35,"name":"Steryl_ester_lip"}],"location":{"chromosome_name":"supercont5.1","end_pos":3928752,"start_pos":3927215,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00158","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21773","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00158","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23444","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00158","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23455","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00158","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6617","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00158","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6622","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00158","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1672.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00158","ortholog_taxonid":4932,"ortholog_uniquename":"YKL140W","reference_uniquename":"PMID:29761456"}],"product":"triglyceride lipase-cholesterol esterase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004771"]}},"subset_termids":["GO:0016788","MONDO:0002525","MONDO:0005066","GO:0006629","MONDO:0002561"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004771":null,"GO:0005737":null,"GO:0008204":null,"MONDO:0019148":null,"MONDO:0019149":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":39,"start":17}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00158.1"],"transcripts_by_uniquename":{"SJAG_00158.1":null},"uniprot_identifier":"B6JXL8","uniquename":"SJAG_00158"}


id: SJAG_00159
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76529],"is_not":false,"summary":null,"term":"GO:0006367"}],"cellular_component":[{"annotations":[115399],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[76528],"is_not":false,"summary":null,"term":"GO:0005673"}],"molecular_function":[{"annotations":[64816],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[115403],"is_not":false,"summary":null,"term":"GO:0016251"},{"annotations":[76527],"is_not":false,"summary":null,"term":"GO:0001097"}],"mondo":[{"annotations":[85952],"is_not":false,"summary":null,"term":"MONDO:0014841"}]},"dbxrefs":["InterPro:IPR040501","UniProtKB/TrEMBL:B6JXL9","GOA:B6JXL9","EnsemblGenomes-Gn:SJAG_00159","EnsemblGenomes-Tr:EEB05163","InterPro:IPR016656","InterPro:IPR003166"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":62,"start":32}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00164"},{"uniquename":"SJAG_00163"},{"uniquename":"SJAG_00162"},{"uniquename":"SJAG_00161"},{"name":"clr5","uniquename":"SJAG_00160"},{"name":"tfa2","uniquename":"SJAG_00159"},{"uniquename":"SJAG_00158"},{"name":"gst3","uniquename":"SJAG_05181"},{"name":"slx4","uniquename":"SJAG_05180"},{"name":"rng10","uniquename":"SJAG_05179"},{"name":"srb8","uniquename":"SJAG_00156"}],"genes_by_uniquename":{"HGNC:4651":null,"SJAG_00159":null,"SPCC1672.08c":null,"YKR062W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"TFA2 Winged helix domain 2","id":"PF18121","interpro_description":"TFA2, Winged helix domain 2","interpro_id":"IPR040501","interpro_name":"TFA2_Winged_2","locations":[{"end":201,"start":141}],"match_end":201,"match_start":141,"name":"TFA2_Winged_2"},{"dbname":"PFAM","description":"TFIIE beta subunit core domain","id":"PF02186","interpro_description":"Transcription factor TFIIE beta subunit, DNA-binding domain","interpro_id":"IPR003166","interpro_name":"TFIIE_bsu_DNA-bd","locations":[{"end":140,"start":80}],"match_end":140,"match_start":80,"name":"TFIIE_beta"},{"dbname":"PFAM","description":"Tfa2 E-tether","id":"PF22254","interpro_description":"Transcription initiation factor IIE subunit beta, E-tether","interpro_id":"IPR054600","interpro_name":"TFA2_E-tether","locations":[{"end":238,"start":208}],"match_end":238,"match_start":208,"name":"TFA2_E-tether"},{"dbname":"CDD","description":"TFIIE_beta_winged_helix","id":"cd07977","interpro_description":"Transcription factor TFIIE beta subunit, DNA-binding domain","interpro_id":"IPR003166","interpro_name":"TFIIE_bsu_DNA-bd","locations":[{"end":141,"start":72}],"match_end":141,"match_start":72,"name":"TFIIE_beta_winged_helix"},{"dbname":"PROSITE_PROFILES","description":"TFIIE beta central core DNA-binding domain profile.","id":"PS51351","interpro_description":"Transcription factor TFIIE beta subunit, DNA-binding domain","interpro_id":"IPR003166","interpro_name":"TFIIE_bsu_DNA-bd","locations":[{"end":141,"start":66}],"match_end":141,"match_start":66,"name":"TFIIE_BETA_C"},{"dbname":"PANTHER","id":"PTHR12716","interpro_description":"Transcription initiation factor TFIIE, beta subunit","interpro_id":"IPR016656","interpro_name":"TFIIE-bsu","locations":[{"end":280,"start":1}],"match_end":280,"match_start":1,"name":"TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT"},{"dbname":"PIRSF","id":"PIRSF016398","interpro_description":"Transcription initiation factor TFIIE, beta subunit","interpro_id":"IPR016656","interpro_name":"TFIIE-bsu","locations":[{"end":284,"start":1}],"match_end":284,"match_start":1,"name":"TFIIE-beta"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":62,"start":32}],"match_end":62,"match_start":32,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":50,"start":37}],"match_end":50,"match_start":37,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3926876,"start_pos":3925913,"strand":"reverse"},"name":"tfa2","ortholog_annotations":[{"gene_uniquename":"SJAG_00159","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4651","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00159","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1672.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00159","ortholog_taxonid":4932,"ortholog_uniquename":"YKR062W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00159","ortholog_taxonid":4932,"ortholog_uniquename":"YKR062W","reference_uniquename":"PMID:26896847"}],"product":"transcription factor TFIIE beta subunit, TFIIEB, Tfa2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0001097","GO:0003677"],"not-binding":["GO:0016251"]}},"subset_termids":["GO:0005634","GO:0006351","MONDO:0005093","GO:0005730","GO:0140223","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001097":null,"GO:0003677":null,"GO:0005673":null,"GO:0005730":null,"GO:0006367":null,"GO:0016251":null,"MONDO:0014841":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00159.1"],"transcripts_by_uniquename":{"SJAG_00159.1":null},"uniprot_identifier":"B6JXL9","uniquename":"SJAG_00159"}


id: SJAG_00160
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95844],"is_not":false,"summary":null,"term":"GO:0030466"}],"cellular_component":[{"annotations":[95842],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[95843],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05164","UniProtKB/TrEMBL:B6JXM0","EnsemblGenomes-Gn:SJAG_00160","InterPro:IPR025676"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":201,"start":152}},{"range":{"end":355,"start":331}},{"range":{"end":635,"start":614}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00165"},{"uniquename":"SJAG_00164"},{"uniquename":"SJAG_00163"},{"uniquename":"SJAG_00162"},{"uniquename":"SJAG_00161"},{"name":"clr5","uniquename":"SJAG_00160"},{"name":"tfa2","uniquename":"SJAG_00159"},{"uniquename":"SJAG_00158"},{"name":"gst3","uniquename":"SJAG_05181"},{"name":"slx4","uniquename":"SJAG_05180"},{"name":"rng10","uniquename":"SJAG_05179"}],"genes_by_uniquename":{"SJAG_00160":null,"SPAC29B12.08":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Clr5 domain","id":"PF14420","interpro_description":"Clr5 domain","interpro_id":"IPR025676","interpro_name":"Clr5_dom","locations":[{"end":53,"start":1}],"match_end":53,"match_start":1,"name":"Clr5"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":201,"start":152},{"end":355,"start":331},{"end":635,"start":614}],"match_end":635,"match_start":152,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":161,"start":152},{"end":201,"start":189},{"end":355,"start":341}],"match_end":355,"match_start":152,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3925475,"start_pos":3923274,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":127,"start":115}},{"range":{"end":178,"start":161}},{"range":{"end":631,"start":613}}],"name":"clr5","ortholog_annotations":[{"gene_uniquename":"SJAG_00160","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29B12.08","reference_uniquename":"PMID:21511999"}],"product":"Clr5 protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0006325"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0030466":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00160.1"],"transcripts_by_uniquename":{"SJAG_00160.1":null},"uniprot_identifier":"B6JXM0","uniquename":"SJAG_00160"}


id: SJAG_00161
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":209,"start":23}}],"cv_annotations":{"cellular_component":[{"annotations":[59443],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101129],"is_not":false,"summary":null,"term":"GO:0005783"}],"sequence":[{"annotations":[81068],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05165","InterPro:IPR019435","UniProtKB/TrEMBL:B6JXM1","EnsemblGenomes-Gn:SJAG_00161"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl35Aa","uniquename":"SJAG_00166"},{"uniquename":"SJAG_00165"},{"uniquename":"SJAG_00164"},{"uniquename":"SJAG_00163"},{"uniquename":"SJAG_00162"},{"uniquename":"SJAG_00161"},{"name":"clr5","uniquename":"SJAG_00160"},{"name":"tfa2","uniquename":"SJAG_00159"},{"uniquename":"SJAG_00158"},{"name":"gst3","uniquename":"SJAG_05181"},{"name":"slx4","uniquename":"SJAG_05180"}],"genes_by_uniquename":{"SJAG_00161":null,"SPAC977.05c":null,"SPBC1348.06c":null,"SPBPB2B2.15":null,"YGL258W":null,"YOR387C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Yeast-specific zinc responsive","id":"PF10339","interpro_description":"Velum formation protein 1-like","interpro_id":"IPR019435","interpro_name":"Vel1-like","locations":[{"end":209,"start":7}],"match_end":209,"match_start":7,"name":"Vel1p"}],"location":{"chromosome_name":"supercont5.1","end_pos":3921875,"start_pos":3921246,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00161","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC977.05c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00161","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1348.06c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00161","ortholog_taxonid":4896,"ortholog_uniquename":"SPBPB2B2.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00161","ortholog_taxonid":4932,"ortholog_uniquename":"YGL258W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00161","ortholog_taxonid":4932,"ortholog_uniquename":"YGL258W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00161","ortholog_taxonid":4932,"ortholog_uniquename":"YGL258W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00161","ortholog_taxonid":4932,"ortholog_uniquename":"YGL258W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00161","ortholog_taxonid":4932,"ortholog_uniquename":"YOR387C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00161","ortholog_taxonid":4932,"ortholog_uniquename":"YOR387C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00161","ortholog_taxonid":4932,"ortholog_uniquename":"YOR387C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00161","ortholog_taxonid":4932,"ortholog_uniquename":"YOR387C","reference_uniquename":"PMID:26896847"}],"product":"Velum formation protein 1-like conserved fungal family","references_by_uniquename":{"GO_REF:0000044":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":22,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"subset_termids":["GO:0005783","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005829":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00161.1"],"transcripts_by_uniquename":{"SJAG_00161.1":null},"uniprot_identifier":"B6JXM1","uniquename":"SJAG_00161"}


id: SJAG_00162
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[102541],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[102542],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[102543],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102544],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JXM2","InterPro:IPR028018","EnsemblGenomes-Tr:EEB05166","EnsemblGenomes-Gn:SJAG_00162"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"toc1","uniquename":"SJAG_00167"},{"name":"rpl35Aa","uniquename":"SJAG_00166"},{"uniquename":"SJAG_00165"},{"uniquename":"SJAG_00164"},{"uniquename":"SJAG_00163"},{"uniquename":"SJAG_00162"},{"uniquename":"SJAG_00161"},{"name":"clr5","uniquename":"SJAG_00160"},{"name":"tfa2","uniquename":"SJAG_00159"},{"uniquename":"SJAG_00158"},{"name":"gst3","uniquename":"SJAG_05181"}],"genes_by_uniquename":{"SJAG_00162":null,"SPBC1198.03c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Domain of unknown function (DUF4646)","id":"PF15496","interpro_description":"Protein of unknown function DUF4646","interpro_id":"IPR028018","interpro_name":"DUF4646","locations":[{"end":188,"start":68}],"match_end":188,"match_start":68,"name":"DUF4646"}],"location":{"chromosome_name":"supercont5.1","end_pos":3920994,"start_pos":3920224,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00162","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1198.03c","reference_uniquename":"PMID:21511999"}],"product":"DUF4646 family conserved fungal protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0032153":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00162.1"],"transcripts_by_uniquename":{"SJAG_00162.1":null},"uniprot_identifier":"B6JXM2","uniquename":"SJAG_00162"}


id: SJAG_00163
data:
  {"cv_annotations":{"biological_process":[{"annotations":[87906],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[102547],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[87908],"is_not":false,"summary":null,"term":"GO:0060237"}],"cellular_component":[{"annotations":[74715],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[87903],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[87904],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[87910],"is_not":false,"summary":null,"term":"GO:0001228"},{"annotations":[74716],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[62480],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00163","InterPro:IPR036236","UniProtKB/TrEMBL:B6JXM3","GOA:B6JXM3","InterPro:IPR013087","InterPro:IPR007219","EnsemblGenomes-Tr:EEB05167"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":20,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pgs1","uniquename":"SJAG_00168"},{"name":"toc1","uniquename":"SJAG_00167"},{"name":"rpl35Aa","uniquename":"SJAG_00166"},{"uniquename":"SJAG_00165"},{"uniquename":"SJAG_00164"},{"uniquename":"SJAG_00163"},{"uniquename":"SJAG_00162"},{"uniquename":"SJAG_00161"},{"name":"clr5","uniquename":"SJAG_00160"},{"name":"tfa2","uniquename":"SJAG_00159"},{"uniquename":"SJAG_00158"}],"genes_by_uniquename":{"SJAG_00163":null,"SPAC1039.05c":null,"SPBC1198.04c":null,"YPR022C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Zinc finger, C2H2 type","id":"PF00096","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":50,"start":26},{"end":79,"start":56}],"match_end":79,"match_start":26,"name":"zf-C2H2"},{"dbname":"PFAM","description":"Fungal specific transcription factor domain","id":"PF04082","interpro_description":"Transcription factor domain, fungi","interpro_id":"IPR007219","interpro_name":"Transcription_factor_dom_fun","locations":[{"end":509,"start":313}],"match_end":509,"match_start":313,"name":"Fungal_trans"},{"dbname":"PROSITE_PATTERNS","description":"Zinc finger C2H2 type domain signature.","id":"PS00028","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":50,"start":28},{"end":79,"start":58}],"match_end":79,"match_start":28,"name":"ZINC_FINGER_C2H2_1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger C2H2 type domain profile.","id":"PS50157","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":84,"start":26}],"match_end":84,"match_start":26,"name":"ZINC_FINGER_C2H2_2"},{"dbname":"SMART","id":"SM00355","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":50,"start":26},{"end":79,"start":56}],"match_end":79,"match_start":26,"name":"c2h2final6"},{"dbname":"SUPERFAMILY","id":"SSF57667","interpro_description":"Zinc finger C2H2 superfamily","interpro_id":"IPR036236","interpro_name":"Znf_C2H2_sf","locations":[{"end":74,"start":22}],"match_end":74,"match_start":22,"name":"beta-beta-alpha zinc fingers"},{"dbname":"GENE3D","id":"G3DSA:3.30.160.60","locations":[{"end":79,"start":10}],"match_end":79,"match_start":10,"name":"Classic Zinc Finger"},{"dbname":"PANTHER","id":"PTHR40626","interpro_description":"Transcription factor verF-like","interpro_id":"IPR051059","interpro_name":"VerF-like","locations":[{"end":770,"start":10}],"match_end":770,"match_start":10,"name":"MIP31509P"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":20,"start":1}],"match_end":20,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3919739,"start_pos":3917042,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":96,"start":75}},{"range":{"end":129,"start":108}},{"range":{"end":284,"start":273}},{"range":{"end":674,"start":658}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00163","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1039.05c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00163","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1198.04c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00163","ortholog_taxonid":4932,"ortholog_uniquename":"YPR022C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00163","ortholog_taxonid":4932,"ortholog_uniquename":"YPR022C","reference_uniquename":"PMID:29761456"}],"product":"DNA-binding transcription factor, zf-fungal binuclear cluster type","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270","GO:0000978"],"not-binding":["GO:0001228"]}},"subset_termids":["GO:0015630","GO:0005634","GO:0006355","GO:0006351","GO:0005694","GO:0005730","GO:0003700","GO:0071554","GO:0072686"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0000785":null,"GO:0000978":null,"GO:0001228":null,"GO:0005730":null,"GO:0008270":null,"GO:0045944":null,"GO:0060237":null,"GO:0072686":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00163.1"],"transcripts_by_uniquename":{"SJAG_00163.1":null},"uniprot_identifier":"B6JXM3","uniquename":"SJAG_00163"}


id: SJAG_00164
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95852],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[95850],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77460],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[77462],"is_not":false,"summary":null,"term":"GO:0031490"},{"annotations":[77461],"is_not":false,"summary":null,"term":"GO:0003713"}],"mondo":[{"annotations":[85709],"is_not":false,"summary":null,"term":"MONDO:0033199"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00164","UniProtKB/TrEMBL:B6JXM4","EnsemblGenomes-Tr:EEB05168"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":174,"start":147}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gcn2","uniquename":"SJAG_00169"},{"name":"pgs1","uniquename":"SJAG_00168"},{"name":"toc1","uniquename":"SJAG_00167"},{"name":"rpl35Aa","uniquename":"SJAG_00166"},{"uniquename":"SJAG_00165"},{"uniquename":"SJAG_00164"},{"uniquename":"SJAG_00163"},{"uniquename":"SJAG_00162"},{"uniquename":"SJAG_00161"},{"name":"clr5","uniquename":"SJAG_00160"},{"name":"tfa2","uniquename":"SJAG_00159"}],"genes_by_uniquename":{"HGNC:12738":null,"HGNC:28389":null,"SJAG_00164":null,"SPAC29B12.11c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CDD","description":"PH-GRAM_WBP2","id":"cd13214","locations":[{"end":134,"start":34}],"match_end":134,"match_start":34,"name":"PH-GRAM_WBP2"},{"dbname":"SUPERFAMILY","id":"SSF50729","locations":[{"end":129,"start":15}],"match_end":129,"match_start":15,"name":"PH domain-like"},{"dbname":"GENE3D","id":"G3DSA:2.30.29.30","interpro_description":"PH-like domain superfamily","interpro_id":"IPR011993","interpro_name":"PH-like_dom_sf","locations":[{"end":137,"start":12}],"match_end":137,"match_start":12},{"dbname":"PANTHER","id":"PTHR31606","interpro_description":"WW domain-binding protein 2-like","interpro_id":"IPR044852","interpro_name":"WBP2-like","locations":[{"end":158,"start":1}],"match_end":158,"match_start":1,"name":"WW DOMAIN BINDING PROTEIN 2, ISOFORM E"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":174,"start":147}],"match_end":174,"match_start":147,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":174,"start":165}],"match_end":174,"match_start":165,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3916079,"start_pos":3915227,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00164","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12738","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00164","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28389","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00164","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29B12.11c","reference_uniquename":"PMID:21511999"}],"product":"human WW domain binding protein-2 ortholog","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0031490"],"not-binding":["GO:0003713"]}},"subset_termids":["MONDO:0006025","GO:0006355","GO:0003713","MONDO:0019497","GO:0060090","GO:0006351","GO:0005634","GO:0003712","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003713":null,"GO:0005634":null,"GO:0005829":null,"GO:0031490":null,"GO:0045944":null,"MONDO:0033199":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00164.1"],"transcripts_by_uniquename":{"SJAG_00164.1":null},"uniprot_identifier":"B6JXM4","uniquename":"SJAG_00164"}


id: SJAG_00165
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6JXM5","InterPro:IPR029058","EnsemblGenomes-Gn:SJAG_00165","EnsemblGenomes-Tr:EEB05169"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ccp1","uniquename":"SJAG_00170"},{"name":"gcn2","uniquename":"SJAG_00169"},{"name":"pgs1","uniquename":"SJAG_00168"},{"name":"toc1","uniquename":"SJAG_00167"},{"name":"rpl35Aa","uniquename":"SJAG_00166"},{"uniquename":"SJAG_00165"},{"uniquename":"SJAG_00164"},{"uniquename":"SJAG_00163"},{"uniquename":"SJAG_00162"},{"uniquename":"SJAG_00161"},{"name":"clr5","uniquename":"SJAG_00160"}],"genes_by_uniquename":{"SJAG_00165":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SUPERFAMILY","id":"SSF53474","interpro_description":"Alpha/Beta hydrolase fold","interpro_id":"IPR029058","interpro_name":"AB_hydrolase_fold","locations":[{"end":153,"start":15}],"match_end":153,"match_start":15,"name":"alpha/beta-Hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1820","interpro_description":"Alpha/Beta hydrolase fold","interpro_id":"IPR029058","interpro_name":"AB_hydrolase_fold","locations":[{"end":153,"start":7}],"match_end":153,"match_start":7,"name":"alpha/beta hydrolase"}],"location":{"chromosome_name":"supercont5.1","end_pos":3914932,"start_pos":3914353,"strand":"forward"},"product":"Alpha/Beta hydrolase fold","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_00165.1"],"transcripts_by_uniquename":{"SJAG_00165.1":null},"uniprot_identifier":"B6JXM5","uniquename":"SJAG_00165"}


id: SJAG_00166
data:
  {"cv_annotations":{"biological_process":[{"annotations":[72274],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[72272],"is_not":false,"summary":null,"term":"GO:0042273"}],"cellular_component":[{"annotations":[72273],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[106053],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[119296],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[106059],"is_not":false,"summary":null,"term":"GO:0019843"},{"annotations":[72271],"is_not":false,"summary":null,"term":"GO:0003735"},{"annotations":[106063],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[87077],"is_not":false,"summary":null,"term":"MONDO:0012925"}]},"dbxrefs":["InterPro:IPR018266","InterPro:IPR038661","GOA:B6JXM6","EnsemblGenomes-Tr:EEB05170","UniProtKB/TrEMBL:B6JXM6","InterPro:IPR009000","EnsemblGenomes-Gn:SJAG_00166","InterPro:IPR001780"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tlg1","uniquename":"SJAG_00171"},{"name":"ccp1","uniquename":"SJAG_00170"},{"name":"gcn2","uniquename":"SJAG_00169"},{"name":"pgs1","uniquename":"SJAG_00168"},{"name":"toc1","uniquename":"SJAG_00167"},{"name":"rpl35Aa","uniquename":"SJAG_00166"},{"uniquename":"SJAG_00165"},{"uniquename":"SJAG_00164"},{"uniquename":"SJAG_00163"},{"uniquename":"SJAG_00162"},{"uniquename":"SJAG_00161"}],"genes_by_uniquename":{"HGNC:10345":null,"SJAG_00166":null,"SPBC1921.01c":null,"SPCP31B10.08c":null,"YOR234C":null,"YPL143W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L35Ae","id":"PF01247","interpro_description":"Large ribosomal subunit protein eL33","interpro_id":"IPR001780","interpro_name":"Ribosomal_eL33","locations":[{"end":102,"start":8}],"match_end":102,"match_start":8,"name":"Ribosomal_L35Ae"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L35Ae signature.","id":"PS01105","interpro_description":"Large ribosomal subunit protein eL33, conserved site","interpro_id":"IPR018266","interpro_name":"Ribosomal_eL33_CS","locations":[{"end":91,"start":70}],"match_end":91,"match_start":70,"name":"RIBOSOMAL_L35AE"},{"dbname":"FUNFAM","description":"60S ribosomal protein L35a","id":"G3DSA:2.40.10.190:FF:000001","locations":[{"end":108,"start":3}],"match_end":108,"match_start":3},{"dbname":"SUPERFAMILY","id":"SSF50447","interpro_description":"Translation protein, beta-barrel domain superfamily","interpro_id":"IPR009000","interpro_name":"Transl_B-barrel_sf","locations":[{"end":102,"start":8}],"match_end":102,"match_start":8,"name":"Translation proteins"},{"dbname":"GENE3D","id":"G3DSA:2.40.10.190","interpro_description":"Large ribosomal subunit protein eL33 superfamily","interpro_id":"IPR038661","interpro_name":"Ribosomal_eL33_sf","locations":[{"end":108,"start":3}],"match_end":108,"match_start":3,"name":"translation elongation factor selb, chain A, domain 4"},{"dbname":"PANTHER","id":"PTHR10902","interpro_description":"Large ribosomal subunit protein eL33","interpro_id":"IPR001780","interpro_name":"Ribosomal_eL33","locations":[{"end":108,"start":4}],"match_end":108,"match_start":4,"name":"60S RIBOSOMAL PROTEIN L35A"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein eL33 [rpl35ae].","id":"MF_00573","interpro_description":"Large ribosomal subunit protein eL33","interpro_id":"IPR001780","interpro_name":"Ribosomal_eL33","locations":[{"end":102,"start":10}],"match_end":102,"match_start":10,"name":"Ribosomal_L35Ae"}],"location":{"chromosome_name":"supercont5.1","end_pos":3911882,"start_pos":3911464,"strand":"reverse"},"name":"rpl35Aa","ortholog_annotations":[{"gene_uniquename":"SJAG_00166","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10345","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00166","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10345","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00166","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1921.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00166","ortholog_taxonid":4896,"ortholog_uniquename":"SPCP31B10.08c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00166","ortholog_taxonid":4932,"ortholog_uniquename":"YOR234C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00166","ortholog_taxonid":4932,"ortholog_uniquename":"YOR234C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00166","ortholog_taxonid":4932,"ortholog_uniquename":"YPL143W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00166","ortholog_taxonid":4932,"ortholog_uniquename":"YPL143W","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L35A","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270","GO:0019843"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0042254","GO:0005829","GO:0005634","MONDO:0002280","GO:0022626","GO:0005198","GO:0005730","MONDO:0005570","GO:0030684","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005730":null,"GO:0008270":null,"GO:0019843":null,"GO:0022625":null,"GO:0030684":null,"GO:0042273":null,"MONDO:0012925":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00166.1"],"transcripts_by_uniquename":{"SJAG_00166.1":null},"uniprot_identifier":"B6JXM6","uniquename":"SJAG_00166"}


id: SJAG_00167
data:
  {"cv_annotations":{"biological_process":[{"annotations":[113354],"is_not":false,"summary":null,"term":"GO:0038202"}],"cellular_component":[{"annotations":[113352],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[113353],"is_not":false,"summary":null,"term":"GO:0031931"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05171","UniProtKB/TrEMBL:B6JXM7","EnsemblGenomes-Gn:SJAG_00167"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":242,"start":213}},{"range":{"end":397,"start":367}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mug20","uniquename":"SJAG_00172"},{"name":"tlg1","uniquename":"SJAG_00171"},{"name":"ccp1","uniquename":"SJAG_00170"},{"name":"gcn2","uniquename":"SJAG_00169"},{"name":"pgs1","uniquename":"SJAG_00168"},{"name":"toc1","uniquename":"SJAG_00167"},{"name":"rpl35Aa","uniquename":"SJAG_00166"},{"uniquename":"SJAG_00165"},{"uniquename":"SJAG_00164"},{"uniquename":"SJAG_00163"},{"uniquename":"SJAG_00162"}],"genes_by_uniquename":{"SJAG_00167":null,"SPBP18G5.03":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":242,"start":213},{"end":397,"start":367}],"match_end":397,"match_start":213,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":232,"start":218}],"match_end":232,"match_start":218,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":242,"start":233}],"match_end":242,"match_start":233,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3911211,"start_pos":3909801,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":179,"start":169}},{"range":{"end":339,"start":325}}],"name":"toc1","ortholog_annotations":[{"gene_uniquename":"SJAG_00167","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP18G5.03","reference_uniquename":"PMID:21511999"}],"product":"TORC1 complex Tor2 interacting protein 1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0031931":null,"GO:0038202":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00167.1"],"transcripts_by_uniquename":{"SJAG_00167.1":null},"uniprot_identifier":"B6JXM7","uniquename":"SJAG_00167"}


id: SJAG_00168
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71629],"is_not":false,"summary":null,"term":"GO:0032049"},{"annotations":[113348],"is_not":false,"summary":null,"term":"GO:0016024"},{"annotations":[113349],"is_not":false,"summary":null,"term":"GO:0007006"}],"cellular_component":[{"annotations":[113345],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[113346],"is_not":false,"summary":null,"term":"GO:0031966"}],"molecular_function":[{"annotations":[58765],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[71628],"is_not":false,"summary":null,"term":"GO:0008444"}]},"dbxrefs":["InterPro:IPR016270","InterPro:IPR025202","UniProtKB/TrEMBL:B6JXM8","EnsemblGenomes-Tr:EEB05172","EnsemblGenomes-Gn:SJAG_00168","GOA:B6JXM8","InterPro:IPR001736"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pib1","uniquename":"SJAG_00173"},{"name":"mug20","uniquename":"SJAG_00172"},{"name":"tlg1","uniquename":"SJAG_00171"},{"name":"ccp1","uniquename":"SJAG_00170"},{"name":"gcn2","uniquename":"SJAG_00169"},{"name":"pgs1","uniquename":"SJAG_00168"},{"name":"toc1","uniquename":"SJAG_00167"},{"name":"rpl35Aa","uniquename":"SJAG_00166"},{"uniquename":"SJAG_00165"},{"uniquename":"SJAG_00164"},{"uniquename":"SJAG_00163"}],"genes_by_uniquename":{"HGNC:30029":null,"SJAG_00168":null,"SPBP18G5.02":null,"YCL004W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PLD-like domain","id":"PF13091","interpro_description":"Phospholipase D-like domain","interpro_id":"IPR025202","interpro_name":"PLD-like_dom","locations":[{"end":184,"start":41}],"match_end":184,"match_start":41,"name":"PLDc_2"},{"dbname":"CDD","description":"PLDc_PGS1_euk_2","id":"cd09137","locations":[{"end":447,"start":258}],"match_end":447,"match_start":258,"name":"PLDc_PGS1_euk_2"},{"dbname":"CDD","description":"PLDc_PGS1_euk_1","id":"cd09135","locations":[{"end":193,"start":27}],"match_end":193,"match_start":27,"name":"PLDc_PGS1_euk_1"},{"dbname":"SMART","id":"SM00155","interpro_description":"Phospholipase D/Transphosphatidylase","interpro_id":"IPR001736","interpro_name":"PLipase_D/transphosphatidylase","locations":[{"end":166,"start":140},{"end":406,"start":373}],"match_end":406,"match_start":140,"name":"pld_4"},{"dbname":"SUPERFAMILY","id":"SSF56024","locations":[{"end":195,"start":22}],"match_end":195,"match_start":22,"name":"Phospholipase D/nuclease"},{"dbname":"GENE3D","id":"G3DSA:3.30.870.10","locations":[{"end":222,"start":26},{"end":464,"start":239}],"match_end":464,"match_start":26,"name":"Endonuclease Chain A"},{"dbname":"PANTHER","id":"PTHR12586","interpro_description":"CDP-alcohol phosphatidyltransferase class-II family","interpro_id":"IPR016270","interpro_name":"PGS1","locations":[{"end":463,"start":7}],"match_end":463,"match_start":7,"name":"CDP-DIACYLGLYCEROL--SERINE O-PHOSPHATIDYLTRANSFERASE"},{"dbname":"PIRSF","id":"PIRSF000850","locations":[{"end":218,"start":5},{"end":463,"start":228}],"match_end":463,"match_start":5,"name":"PLD_PSS"}],"location":{"chromosome_name":"supercont5.1","end_pos":3909565,"start_pos":3908055,"strand":"forward"},"name":"pgs1","ortholog_annotations":[{"gene_uniquename":"SJAG_00168","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30029","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00168","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP18G5.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00168","ortholog_taxonid":4932,"ortholog_uniquename":"YCL004W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00168","ortholog_taxonid":4932,"ortholog_uniquename":"YCL004W","reference_uniquename":"PMID:26896847"}],"product":"CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase Pgs1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0008444"]}},"subset_termids":["GO:0016780","GO:0006629","GO:0061024","GO:0007005","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005759":null,"GO:0007006":null,"GO:0008444":null,"GO:0016024":null,"GO:0031966":null,"GO:0032049":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00168.1"],"transcripts_by_uniquename":{"SJAG_00168.1":null},"uniprot_identifier":"B6JXM8","uniquename":"SJAG_00168"}


id: SJAG_00169
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":769,"start":769}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":571,"start":563}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":586,"start":586}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":587,"start":587}}],"coiled_coil_coords":[{"range":{"end":163,"start":136}}],"cv_annotations":{"biological_process":[{"annotations":[72783],"is_not":false,"summary":null,"term":"GO:0034198"},{"annotations":[109992],"is_not":false,"summary":null,"term":"GO:0070314"},{"annotations":[109993],"is_not":false,"summary":null,"term":"GO:0140469"},{"annotations":[109994],"is_not":false,"summary":null,"term":"GO:0031571"},{"annotations":[109996],"is_not":false,"summary":null,"term":"GO:1990625"},{"annotations":[109997],"is_not":false,"summary":null,"term":"GO:1904262"},{"annotations":[109998],"is_not":false,"summary":null,"term":"GO:0010508"}],"cellular_component":[{"annotations":[72782],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72780],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[60147],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[72779],"is_not":false,"summary":null,"term":"GO:0004694"},{"annotations":[110001],"is_not":false,"summary":null,"term":"GO:0000049"}],"mondo":[{"annotations":[87394],"is_not":false,"summary":null,"term":"MONDO:0009329"}]},"dbxrefs":["InterPro:IPR008271","InterPro:IPR016135","InterPro:IPR024435","InterPro:IPR006575","EnsemblGenomes-Gn:SJAG_00169","InterPro:IPR041715","UniProtKB/TrEMBL:B6JXM9","GOA:B6JXM9","InterPro:IPR011009","InterPro:IPR000719","InterPro:IPR016255","InterPro:IPR036621","InterPro:IPR017441","EnsemblGenomes-Tr:EEB05173"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":168,"start":147}},{"range":{"end":711,"start":671}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dus1","uniquename":"SJAG_00174"},{"name":"pib1","uniquename":"SJAG_00173"},{"name":"mug20","uniquename":"SJAG_00172"},{"name":"tlg1","uniquename":"SJAG_00171"},{"name":"ccp1","uniquename":"SJAG_00170"},{"name":"gcn2","uniquename":"SJAG_00169"},{"name":"pgs1","uniquename":"SJAG_00168"},{"name":"toc1","uniquename":"SJAG_00167"},{"name":"rpl35Aa","uniquename":"SJAG_00166"},{"uniquename":"SJAG_00165"},{"uniquename":"SJAG_00164"}],"genes_by_uniquename":{"HGNC:19687":null,"SJAG_00169":null,"SPBC36B7.09":null,"YDR283C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":508,"start":283},{"end":644,"start":557},{"end":915,"start":718}],"match_end":915,"match_start":283,"name":"Pkinase"},{"dbname":"PFAM","description":"Histidyl-tRNA synthetase","id":"PF13393","interpro_description":"Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain","interpro_id":"IPR041715","interpro_name":"HisRS-like_core","locations":[{"end":1293,"start":1094}],"match_end":1293,"match_start":1094,"name":"tRNA-synt_His"},{"dbname":"PFAM","description":"RWD domain","id":"PF05773","interpro_description":"RWD domain","interpro_id":"IPR006575","interpro_name":"RWD_dom","locations":[{"end":124,"start":12}],"match_end":124,"match_start":12,"name":"RWD"},{"dbname":"PFAM","description":"Anticodon binding domain of tRNAs","id":"PF12745","interpro_description":"Histidyl tRNA synthetase-related domain","interpro_id":"IPR024435","interpro_name":"HisRS-related_dom","locations":[{"end":1573,"start":1324}],"match_end":1573,"match_start":1324,"name":"HGTP_anticodon2"},{"dbname":"CDD","description":"STKc_EIF2AK4_GCN2_rpt2","id":"cd14046","locations":[{"end":915,"start":551}],"match_end":915,"match_start":551,"name":"STKc_EIF2AK4_GCN2_rpt2"},{"dbname":"CDD","description":"PK_eIF2AK_GCN2_rpt1","id":"cd14012","locations":[{"end":509,"start":243}],"match_end":509,"match_start":243,"name":"PK_eIF2AK_GCN2_rpt1"},{"dbname":"CDD","description":"RWD_GCN2","id":"cd23823","locations":[{"end":128,"start":11}],"match_end":128,"match_start":11,"name":"RWD_GCN2"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":777,"start":765}],"match_end":777,"match_start":765,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PATTERNS","description":"Protein kinases ATP-binding region signature.","id":"PS00107","interpro_description":"Protein kinase, ATP binding site","interpro_id":"IPR017441","interpro_name":"Protein_kinase_ATP_BS","locations":[{"end":587,"start":563}],"match_end":587,"match_start":563,"name":"PROTEIN_KINASE_ATP"},{"dbname":"PROSITE_PROFILES","description":"RWD domain profile.","id":"PS50908","interpro_description":"RWD domain","interpro_id":"IPR006575","interpro_name":"RWD_dom","locations":[{"end":127,"start":16}],"match_end":127,"match_start":16,"name":"RWD"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":512,"start":237},{"end":926,"start":557}],"match_end":926,"match_start":237,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00591","interpro_description":"RWD domain","interpro_id":"IPR006575","interpro_name":"RWD_dom","locations":[{"end":127,"start":16}],"match_end":127,"match_start":16,"name":"RWD2001b"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":511,"start":251},{"end":917,"start":557}],"match_end":917,"match_start":251,"name":"serkin_6"},{"dbname":"FUNFAM","description":"eIF-2-alpha kinase GCN2","id":"G3DSA:3.10.110.10:FF:000050","locations":[{"end":134,"start":5}],"match_end":134,"match_start":5},{"dbname":"FUNFAM","description":"eIF-2-alpha kinase GCN2","id":"G3DSA:3.30.200.20:FF:000379","locations":[{"end":658,"start":547}],"match_end":658,"match_start":547},{"dbname":"SUPERFAMILY","id":"SSF52954","locations":[{"end":1432,"start":1331}],"match_end":1432,"match_start":1331,"name":"Class II aaRS ABD-related"},{"dbname":"SUPERFAMILY","id":"SSF55681","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":1294,"start":990}],"match_end":1294,"match_start":990,"name":"Class II aaRS and biotin synthetases"},{"dbname":"SUPERFAMILY","id":"SSF54495","interpro_description":"Ubiquitin-conjugating enzyme/RWD-like","interpro_id":"IPR016135","interpro_name":"UBQ-conjugating_enzyme/RWD","locations":[{"end":132,"start":10}],"match_end":132,"match_start":10,"name":"UBC-like"},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":511,"start":264},{"end":628,"start":552},{"end":915,"start":716}],"match_end":915,"match_start":264,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.800","interpro_description":"Anticodon-binding domain superfamily","interpro_id":"IPR036621","interpro_name":"Anticodon-bd_dom_sf","locations":[{"end":1426,"start":1326}],"match_end":1426,"match_start":1326},{"dbname":"GENE3D","id":"G3DSA:3.30.930.10","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":1307,"start":980}],"match_end":1307,"match_start":980,"name":"Bira Bifunctional Protein; Domain 2"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":531,"start":257},{"end":927,"start":700}],"match_end":927,"match_start":257,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.10.110.10","interpro_description":"Ubiquitin-conjugating enzyme/RWD-like","interpro_id":"IPR016135","interpro_name":"UBQ-conjugating_enzyme/RWD","locations":[{"end":135,"start":5}],"match_end":135,"match_start":5,"name":"Ubiquitin Conjugating Enzyme"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":660,"start":547}],"match_end":660,"match_start":547,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"PANTHER","id":"PTHR11042","interpro_description":"Cell Cycle and Stress Response Kinase","interpro_id":"IPR050339","interpro_name":"CC_SR_Kinase","locations":[{"end":512,"start":294}],"match_end":512,"match_start":294,"name":"EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE  EIF2-ALPHA KINASE -RELATED"},{"dbname":"PIRSF","id":"PIRSF000660","interpro_description":"eIF-2-alpha kinase Gcn2","interpro_id":"IPR016255","interpro_name":"Gcn2","locations":[{"end":1575,"start":1}],"match_end":1575,"match_start":1,"name":"STPK_GCN2"},{"dbname":"COILS","id":"Coil","locations":[{"end":163,"start":136}],"match_end":163,"match_start":136,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":168,"start":147},{"end":711,"start":671}],"match_end":711,"match_start":147,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":704,"start":691}],"match_end":704,"match_start":691,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3907752,"start_pos":3902972,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":43,"start":31}},{"range":{"end":574,"start":563}},{"range":{"end":641,"start":623}},{"range":{"end":689,"start":669}},{"range":{"end":715,"start":704}}],"name":"gcn2","ortholog_annotations":[{"gene_uniquename":"SJAG_00169","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19687","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00169","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC36B7.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00169","ortholog_taxonid":4932,"ortholog_uniquename":"YDR283C","reference_uniquename":"PMID:29761456"}],"product":"eIF2 alpha kinase Gcn2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0000049"],"not-binding":["GO:0004694"]}},"subset_termids":["GO:0140096","GO:0044772","GO:0005634","GO:0002181","GO:0016301","GO:0023052","GO:0004672","GO:0005829","GO:0006914"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000049":null,"GO:0004694":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0010508":null,"GO:0031571":null,"GO:0034198":null,"GO:0070314":null,"GO:0140469":null,"GO:1904262":null,"GO:1990625":null,"MONDO:0009329":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00169.1"],"transcripts_by_uniquename":{"SJAG_00169.1":null},"uniprot_identifier":"B6JXM9","uniquename":"SJAG_00169"}


id: SJAG_00170
data:
  {"coiled_coil_coords":[{"range":{"end":32,"start":12}}],"cv_annotations":{"biological_process":[{"annotations":[109986],"is_not":false,"summary":null,"term":"GO:0140898"}],"cellular_component":[{"annotations":[109982],"is_not":false,"summary":null,"term":"GO:0061638"},{"annotations":[109985],"is_not":false,"summary":null,"term":"GO:0005654"}],"molecular_function":[{"annotations":[74463],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[74460],"is_not":false,"summary":null,"term":"GO:0042393"},{"annotations":[109988],"is_not":false,"summary":null,"term":"GO:0140713"}],"mondo":[{"annotations":[86670],"is_not":false,"summary":null,"term":"MONDO:0020847"}]},"dbxrefs":["InterPro:IPR002164","GOA:B6JXN0","EnsemblGenomes-Tr:EEB05174","EnsemblGenomes-Gn:SJAG_00170","InterPro:IPR037231","UniProtKB/TrEMBL:B6JXN0"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":243,"start":202}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sec63","uniquename":"SJAG_00175"},{"name":"dus1","uniquename":"SJAG_00174"},{"name":"pib1","uniquename":"SJAG_00173"},{"name":"mug20","uniquename":"SJAG_00172"},{"name":"tlg1","uniquename":"SJAG_00171"},{"name":"ccp1","uniquename":"SJAG_00170"},{"name":"gcn2","uniquename":"SJAG_00169"},{"name":"pgs1","uniquename":"SJAG_00168"},{"name":"toc1","uniquename":"SJAG_00167"},{"name":"rpl35Aa","uniquename":"SJAG_00166"},{"uniquename":"SJAG_00165"}],"genes_by_uniquename":{"HGNC:10760":null,"SJAG_00170":null,"SPBC36B7.08c":null,"YNL246W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nucleosome assembly protein (NAP)","id":"PF00956","interpro_description":"Nucleosome assembly protein (NAP)","interpro_id":"IPR002164","interpro_name":"NAP_family","locations":[{"end":201,"start":46}],"match_end":201,"match_start":46,"name":"NAP"},{"dbname":"SUPERFAMILY","id":"SSF143113","interpro_description":"NAP-like superfamily","interpro_id":"IPR037231","interpro_name":"NAP-like_sf","locations":[{"end":226,"start":10}],"match_end":226,"match_start":10,"name":"NAP-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.1120.90","locations":[{"end":203,"start":44}],"match_end":203,"match_start":44,"name":"Nucleosome assembly protein"},{"dbname":"PANTHER","id":"PTHR11875","interpro_description":"Nucleosome assembly protein (NAP)","interpro_id":"IPR002164","interpro_name":"NAP_family","locations":[{"end":220,"start":10}],"match_end":220,"match_start":10,"name":"TESTIS-SPECIFIC Y-ENCODED PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":32,"start":12}],"match_end":32,"match_start":12,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":243,"start":202}],"match_end":243,"match_start":202,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":230,"start":203}],"match_end":230,"match_start":203,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":243,"start":231}],"match_end":243,"match_start":231,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3902356,"start_pos":3901461,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":134,"start":119}},{"range":{"end":231,"start":203}}],"name":"ccp1","ortholog_annotations":[{"gene_uniquename":"SJAG_00170","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10760","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00170","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC36B7.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00170","ortholog_taxonid":4932,"ortholog_uniquename":"YNL246W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00170","ortholog_taxonid":4932,"ortholog_uniquename":"YNL246W","reference_uniquename":"PMID:26896847"}],"product":"CENP-A histone disassembly chaperone Ccp1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003682","GO:0042393"],"not-binding":["GO:0140713"]}},"subset_termids":["GO:0140104","GO:0005654","GO:0005694","GO:0006325","GO:0005634","MONDO:0000426"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003682":null,"GO:0005654":null,"GO:0042393":null,"GO:0061638":null,"GO:0140713":null,"GO:0140898":null,"MONDO:0020847":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00170.1"],"transcripts_by_uniquename":{"SJAG_00170.1":null},"uniprot_identifier":"B6JXN0","uniquename":"SJAG_00170"}


id: SJAG_00171
data:
  {"coiled_coil_coords":[{"range":{"end":65,"start":45}}],"cv_annotations":{"biological_process":[{"annotations":[58344],"is_not":false,"summary":null,"term":"GO:0048193"},{"annotations":[109978],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[109979],"is_not":false,"summary":null,"term":"GO:0048278"},{"annotations":[109980],"is_not":false,"summary":null,"term":"GO:0006906"}],"cellular_component":[{"annotations":[109972],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[109973],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[109975],"is_not":false,"summary":null,"term":"GO:0000139"},{"annotations":[109976],"is_not":false,"summary":null,"term":"GO:0031201"}],"molecular_function":[{"annotations":[109981],"is_not":false,"summary":null,"term":"GO:0005484"}]},"dbxrefs":["InterPro:IPR015260","GOA:B6JXN1","EnsemblGenomes-Tr:EEB05175","InterPro:IPR000727","InterPro:IPR010989","UniProtKB/TrEMBL:B6JXN1","EnsemblGenomes-Gn:SJAG_00171"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"svf2","uniquename":"SJAG_00176"},{"name":"sec63","uniquename":"SJAG_00175"},{"name":"dus1","uniquename":"SJAG_00174"},{"name":"pib1","uniquename":"SJAG_00173"},{"name":"mug20","uniquename":"SJAG_00172"},{"name":"tlg1","uniquename":"SJAG_00171"},{"name":"ccp1","uniquename":"SJAG_00170"},{"name":"gcn2","uniquename":"SJAG_00169"},{"name":"pgs1","uniquename":"SJAG_00168"},{"name":"toc1","uniquename":"SJAG_00167"},{"name":"rpl35Aa","uniquename":"SJAG_00166"}],"genes_by_uniquename":{"HGNC:11428":null,"HGNC:11441":null,"SJAG_00171":null,"SPBC36B7.07":null,"YDR468C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Syntaxin 6/10/61, N-terminal","id":"PF09177","interpro_description":"Syntaxin 6/10/61, N-terminal","interpro_id":"IPR015260","interpro_name":"Syntaxin-6/10/61_N","locations":[{"end":94,"start":3}],"match_end":94,"match_start":3,"name":"STX6_10_61_N"},{"dbname":"CDD","description":"SNARE_Syntaxin6","id":"cd15851","locations":[{"end":206,"start":145}],"match_end":206,"match_start":145,"name":"SNARE_Syntaxin6"},{"dbname":"CDD","description":"SNARE_NTD_Tlg1p-like","id":"cd21444","interpro_description":"Tlg1p-like, N-terminal domain","interpro_id":"IPR048036","interpro_name":"Tlg1p-like_N","locations":[{"end":98,"start":3}],"match_end":98,"match_start":3,"name":"SNARE_NTD_Tlg1p-like"},{"dbname":"PROSITE_PROFILES","description":"t-SNARE coiled-coil homology domain profile.","id":"PS50192","interpro_description":"Target SNARE coiled-coil homology domain","interpro_id":"IPR000727","interpro_name":"T_SNARE_dom","locations":[{"end":200,"start":138}],"match_end":200,"match_start":138,"name":"T_SNARE"},{"dbname":"SMART","id":"SM00397","interpro_description":"Target SNARE coiled-coil homology domain","interpro_id":"IPR000727","interpro_name":"T_SNARE_dom","locations":[{"end":200,"start":133}],"match_end":200,"match_start":133,"name":"tSNARE_6"},{"dbname":"SUPERFAMILY","id":"SSF47661","interpro_description":"SNARE","interpro_id":"IPR010989","interpro_name":"SNARE","locations":[{"end":97,"start":2}],"match_end":97,"match_start":2,"name":"t-snare proteins"},{"dbname":"SUPERFAMILY","id":"SSF58038","locations":[{"end":199,"start":132}],"match_end":199,"match_start":132,"name":"SNARE fusion complex"},{"dbname":"GENE3D","id":"G3DSA:1.20.58.90","locations":[{"end":100,"start":1}],"match_end":100,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:1.20.5.110","locations":[{"end":200,"start":141}],"match_end":200,"match_start":141},{"dbname":"COILS","id":"Coil","locations":[{"end":65,"start":45}],"match_end":65,"match_start":45,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3901435,"start_pos":3900649,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":143,"start":110}},{"range":{"end":216,"start":206}}],"name":"tlg1","ortholog_annotations":[{"gene_uniquename":"SJAG_00171","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11428","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00171","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11441","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00171","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC36B7.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00171","ortholog_taxonid":4932,"ortholog_uniquename":"YDR468C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00171","ortholog_taxonid":4932,"ortholog_uniquename":"YDR468C","reference_uniquename":"PMID:26896847"}],"product":"SNARE Tlg1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005484"]}},"subset_termids":["GO:0061024","GO:0005783","GO:0031410","GO:0060090","GO:0016192","GO:0005794","GO:0005768","GO:0140056"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005484":null,"GO:0005768":null,"GO:0005783":null,"GO:0006886":null,"GO:0006906":null,"GO:0031201":null,"GO:0048193":null,"GO:0048278":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00171.1"],"transcripts_by_uniquename":{"SJAG_00171.1":null},"uniprot_identifier":"B6JXN1","uniquename":"SJAG_00171"}


id: SJAG_00172
data:
  {"coiled_coil_coords":[{"range":{"end":113,"start":93}},{"range":{"end":159,"start":139}}],"cv_annotations":{"biological_process":[{"annotations":[109971],"is_not":false,"summary":null,"term":"GO:0010780"}],"cellular_component":[{"annotations":[109967],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[109968],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109969],"is_not":false,"summary":null,"term":"GO:0030998"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00172","EnsemblGenomes-Tr:EEB05176","UniProtKB/TrEMBL:B6JXN2"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rad60","uniquename":"SJAG_00177"},{"name":"svf2","uniquename":"SJAG_00176"},{"name":"sec63","uniquename":"SJAG_00175"},{"name":"dus1","uniquename":"SJAG_00174"},{"name":"pib1","uniquename":"SJAG_00173"},{"name":"mug20","uniquename":"SJAG_00172"},{"name":"tlg1","uniquename":"SJAG_00171"},{"name":"ccp1","uniquename":"SJAG_00170"},{"name":"gcn2","uniquename":"SJAG_00169"},{"name":"pgs1","uniquename":"SJAG_00168"},{"name":"toc1","uniquename":"SJAG_00167"}],"genes_by_uniquename":{"SJAG_00172":null,"SPBC36B7.06c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":113,"start":93},{"end":159,"start":139}],"match_end":159,"match_start":93,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3900144,"start_pos":3899523,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":100,"start":89}}],"name":"mug20","ortholog_annotations":[{"gene_uniquename":"SJAG_00172","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC36B7.06c","reference_uniquename":"PMID:21511999"}],"product":"linear element protein Mug20","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0140013","GO:0005634","GO:0006310","GO:0005694","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0005829":null,"GO:0010780":null,"GO:0030998":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00172.1"],"transcripts_by_uniquename":{"SJAG_00172.1":null},"uniprot_identifier":"B6JXN2","uniquename":"SJAG_00172"}


id: SJAG_00173
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109963],"is_not":false,"summary":null,"term":"GO:0071629"}],"cellular_component":[{"annotations":[109960],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109961],"is_not":false,"summary":null,"term":"GO:0005770"},{"annotations":[109962],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[109964],"is_not":false,"summary":null,"term":"GO:0032266"},{"annotations":[109965],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[65385],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JXN3","InterPro:IPR013083","InterPro:IPR011011","GOA:B6JXN3","EnsemblGenomes-Tr:EEB05177","EnsemblGenomes-Gn:SJAG_00173","InterPro:IPR000306","InterPro:IPR001841","InterPro:IPR017455"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mex67","uniquename":"SJAG_00178"},{"name":"rad60","uniquename":"SJAG_00177"},{"name":"svf2","uniquename":"SJAG_00176"},{"name":"sec63","uniquename":"SJAG_00175"},{"name":"dus1","uniquename":"SJAG_00174"},{"name":"pib1","uniquename":"SJAG_00173"},{"name":"mug20","uniquename":"SJAG_00172"},{"name":"tlg1","uniquename":"SJAG_00171"},{"name":"ccp1","uniquename":"SJAG_00170"},{"name":"gcn2","uniquename":"SJAG_00169"},{"name":"pgs1","uniquename":"SJAG_00168"}],"genes_by_uniquename":{"HGNC:22316":null,"SJAG_00173":null,"SPBC36B7.05c":null,"YDR313C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"FYVE zinc finger","id":"PF01363","interpro_description":"FYVE zinc finger","interpro_id":"IPR000306","interpro_name":"Znf_FYVE","locations":[{"end":104,"start":15}],"match_end":104,"match_start":15,"name":"FYVE"},{"dbname":"PFAM","description":"Ring finger domain","id":"PF13639","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":240,"start":198}],"match_end":240,"match_start":198,"name":"zf-RING_2"},{"dbname":"CDD","description":"mRING-CH-C4HC2H_ZNRF","id":"cd16489","locations":[{"end":242,"start":198}],"match_end":242,"match_start":198,"name":"mRING-CH-C4HC2H_ZNRF"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger FYVE/FYVE-related type profile.","id":"PS50178","interpro_description":"Zinc finger, FYVE-related","interpro_id":"IPR017455","interpro_name":"Znf_FYVE-rel","locations":[{"end":104,"start":19}],"match_end":104,"match_start":19,"name":"ZF_FYVE"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger RING-type profile.","id":"PS50089","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":241,"start":199}],"match_end":241,"match_start":199,"name":"ZF_RING_2"},{"dbname":"SMART","id":"SM00064","interpro_description":"FYVE zinc finger","interpro_id":"IPR000306","interpro_name":"Znf_FYVE","locations":[{"end":105,"start":11}],"match_end":105,"match_start":11,"name":"fyve_4"},{"dbname":"SUPERFAMILY","id":"SSF57850","locations":[{"end":244,"start":197}],"match_end":244,"match_start":197,"name":"RING/U-box"},{"dbname":"SUPERFAMILY","id":"SSF57903","interpro_description":"Zinc finger, FYVE/PHD-type","interpro_id":"IPR011011","interpro_name":"Znf_FYVE_PHD","locations":[{"end":111,"start":16}],"match_end":111,"match_start":16,"name":"FYVE/PHD zinc finger"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":108,"start":4},{"end":246,"start":165}],"match_end":246,"match_start":4,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PANTHER","id":"PTHR23164","locations":[{"end":131,"start":13}],"match_end":131,"match_start":13,"name":"EARLY ENDOSOME ANTIGEN 1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3899268,"start_pos":3898468,"strand":"reverse"},"name":"pib1","ortholog_annotations":[{"gene_uniquename":"SJAG_00173","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:22316","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00173","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC36B7.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00173","ortholog_taxonid":4932,"ortholog_uniquename":"YDR313C","reference_uniquename":"PMID:29761456"}],"product":"endosomal and vacuolar ubiquitin-protein ligase E3/phosphatidylinositol(3)-phosphate binding protein Pib1","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270","GO:0032266"],"not-binding":["GO:0061630"]}},"subset_termids":["GO:0008289","GO:0140096","GO:0031410","GO:0005634","GO:0016746","GO:0030163","GO:0005768","GO:0005829","GO:0019787"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005770":null,"GO:0005829":null,"GO:0008270":null,"GO:0032266":null,"GO:0061630":null,"GO:0071629":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00173.1"],"transcripts_by_uniquename":{"SJAG_00173.1":null},"uniprot_identifier":"B6JXN3","uniquename":"SJAG_00173"}


id: SJAG_00174
data:
  {"coiled_coil_coords":[{"range":{"end":397,"start":377}}],"cv_annotations":{"biological_process":[{"annotations":[65217],"is_not":false,"summary":null,"term":"GO:0002943"}],"cellular_component":[{"annotations":[109953],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[109954],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[65215],"is_not":false,"summary":null,"term":"GO:0050660"},{"annotations":[109957],"is_not":false,"summary":null,"term":"GO:0106414"},{"annotations":[109958],"is_not":false,"summary":null,"term":"GO:0102262"},{"annotations":[109959],"is_not":false,"summary":null,"term":"GO:0102263"}]},"dbxrefs":["InterPro:IPR018517","EnsemblGenomes-Gn:SJAG_00174","UniProtKB/TrEMBL:B6JXN4","GOA:B6JXN4","InterPro:IPR013785","InterPro:IPR001269","EnsemblGenomes-Tr:EEB05178","InterPro:IPR035587"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00179"},{"name":"mex67","uniquename":"SJAG_00178"},{"name":"rad60","uniquename":"SJAG_00177"},{"name":"svf2","uniquename":"SJAG_00176"},{"name":"sec63","uniquename":"SJAG_00175"},{"name":"dus1","uniquename":"SJAG_00174"},{"name":"pib1","uniquename":"SJAG_00173"},{"name":"mug20","uniquename":"SJAG_00172"},{"name":"tlg1","uniquename":"SJAG_00171"},{"name":"ccp1","uniquename":"SJAG_00170"},{"name":"gcn2","uniquename":"SJAG_00169"}],"genes_by_uniquename":{"HGNC:30086":null,"SJAG_00174":null,"SPBC36B7.04":null,"YML080W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Dihydrouridine synthase (Dus)","id":"PF01207","interpro_description":"DUS-like, FMN-binding domain","interpro_id":"IPR035587","interpro_name":"DUS-like_FMN-bd","locations":[{"end":308,"start":22}],"match_end":308,"match_start":22,"name":"Dus"},{"dbname":"CDD","description":"DUS_like_FMN","id":"cd02801","interpro_description":"DUS-like, FMN-binding domain","interpro_id":"IPR035587","interpro_name":"DUS-like_FMN-bd","locations":[{"end":246,"start":20}],"match_end":246,"match_start":20,"name":"DUS_like_FMN"},{"dbname":"PROSITE_PATTERNS","description":"Uncharacterized protein family UPF0034 signature.","id":"PS01136","interpro_description":"tRNA-dihydrouridine synthase, conserved site","interpro_id":"IPR018517","interpro_name":"tRNA_hU_synthase_CS","locations":[{"end":122,"start":104}],"match_end":122,"match_start":104,"name":"UPF0034"},{"dbname":"SUPERFAMILY","id":"SSF51395","locations":[{"end":307,"start":20}],"match_end":307,"match_start":20,"name":"FMN-linked oxidoreductases"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.70","interpro_description":"Aldolase-type TIM barrel","interpro_id":"IPR013785","interpro_name":"Aldolase_TIM","locations":[{"end":251,"start":18}],"match_end":251,"match_start":18,"name":"Aldolase class I"},{"dbname":"PANTHER","id":"PTHR11082","locations":[{"end":379,"start":5}],"match_end":379,"match_start":5,"name":"TRNA-DIHYDROURIDINE SYNTHASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":397,"start":377}],"match_end":397,"match_start":377,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3898230,"start_pos":3897019,"strand":"forward"},"name":"dus1","ortholog_annotations":[{"gene_uniquename":"SJAG_00174","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30086","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00174","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC36B7.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00174","ortholog_taxonid":4932,"ortholog_uniquename":"YML080W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00174","ortholog_taxonid":4932,"ortholog_uniquename":"YML080W","reference_uniquename":"PMID:26896847"}],"product":"tRNA/mRNA dihydrouridine synthase Dus1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0050660"],"not-binding":["GO:0102263","GO:0102262","GO:0106414"]}},"subset_termids":["GO:0005634","GO:0140101","GO:0016491","GO:0006399","GO:0005739","GO:0140098"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002943":null,"GO:0005634":null,"GO:0005739":null,"GO:0050660":null,"GO:0102262":null,"GO:0102263":null,"GO:0106414":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00174.1"],"transcripts_by_uniquename":{"SJAG_00174.1":null},"uniprot_identifier":"B6JXN4","uniquename":"SJAG_00174"}


id: SJAG_00175
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70257],"is_not":false,"summary":null,"term":"GO:0006620"},{"annotations":[57120],"is_not":false,"summary":null,"term":"GO:0071806"},{"annotations":[70256],"is_not":false,"summary":null,"term":"GO:0006614"}],"cellular_component":[{"annotations":[109946],"is_not":false,"summary":null,"term":"GO:0032541"},{"annotations":[119910],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[70258],"is_not":false,"summary":null,"term":"GO:0031207"}],"molecular_function":[{"annotations":[70255],"is_not":false,"summary":null,"term":"GO:0008320"}],"mondo":[{"annotations":[86391],"is_not":false,"summary":null,"term":"MONDO:0014860"}]},"dbxrefs":["InterPro:IPR036869","EnsemblGenomes-Gn:SJAG_00175","UniProtKB/TrEMBL:B6JXN5","InterPro:IPR027137","InterPro:IPR001623","InterPro:IPR004179","EnsemblGenomes-Tr:EEB05179","GOA:B6JXN5","InterPro:IPR014756","InterPro:IPR035892"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":631,"start":558}}],"feature_publications":[{"reference_uniquename":"PMID:21802294","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ape2","uniquename":"SJAG_00181"},{"uniquename":"SJAG_00179"},{"name":"mex67","uniquename":"SJAG_00178"},{"name":"rad60","uniquename":"SJAG_00177"},{"name":"svf2","uniquename":"SJAG_00176"},{"name":"sec63","uniquename":"SJAG_00175"},{"name":"dus1","uniquename":"SJAG_00174"},{"name":"pib1","uniquename":"SJAG_00173"},{"name":"mug20","uniquename":"SJAG_00172"},{"name":"tlg1","uniquename":"SJAG_00171"},{"name":"ccp1","uniquename":"SJAG_00170"}],"genes_by_uniquename":{"HGNC:21082":null,"SJAG_00175":null,"SPBC36B7.03":null,"YOR254C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sec63 Brl domain","id":"PF02889","interpro_description":"Sec63 domain","interpro_id":"IPR004179","interpro_name":"Sec63-dom","locations":[{"end":540,"start":248}],"match_end":540,"match_start":248,"name":"Sec63"},{"dbname":"PFAM","description":"DnaJ domain","id":"PF00226","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":164,"start":98}],"match_end":164,"match_start":98,"name":"DnaJ"},{"dbname":"CDD","description":"DnaJ","id":"cd06257","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":157,"start":98}],"match_end":157,"match_start":98,"name":"DnaJ"},{"dbname":"PROSITE_PROFILES","description":"dnaJ domain profile.","id":"PS50076","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":168,"start":98}],"match_end":168,"match_start":98,"name":"DNAJ_2"},{"dbname":"SMART","id":"SM00973","interpro_description":"Sec63 domain","interpro_id":"IPR004179","interpro_name":"Sec63-dom","locations":[{"end":547,"start":217}],"match_end":547,"match_start":217,"name":"Sec63_2"},{"dbname":"SMART","id":"SM00271","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":160,"start":97}],"match_end":160,"match_start":97,"name":"dnaj_3"},{"dbname":"PRINTS","description":"DnaJ domain signature","id":"PR00625","interpro_description":"DnaJ domain","interpro_id":"IPR001623","interpro_name":"DnaJ_domain","locations":[{"end":133,"start":100},{"end":160,"start":140}],"match_end":160,"match_start":100,"name":"JDOMAIN"},{"dbname":"FUNFAM","description":"Protein translocation complex component (Npl1)","id":"G3DSA:1.10.287.110:FF:000039","locations":[{"end":179,"start":86}],"match_end":179,"match_start":86},{"dbname":"SUPERFAMILY","id":"SSF46565","interpro_description":"Chaperone J-domain superfamily","interpro_id":"IPR036869","interpro_name":"J_dom_sf","locations":[{"end":170,"start":86}],"match_end":170,"match_start":86,"name":"Chaperone J-domain"},{"dbname":"SUPERFAMILY","id":"SSF81296","interpro_description":"Immunoglobulin E-set","interpro_id":"IPR014756","interpro_name":"Ig_E-set","locations":[{"end":430,"start":402},{"end":551,"start":466}],"match_end":551,"match_start":402,"name":"E set domains"},{"dbname":"SUPERFAMILY","id":"SSF158702","locations":[{"end":395,"start":244}],"match_end":395,"match_start":244,"name":"Sec63 N-terminal domain-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.110","interpro_description":"Chaperone J-domain superfamily","interpro_id":"IPR036869","interpro_name":"J_dom_sf","locations":[{"end":177,"start":86}],"match_end":177,"match_start":86,"name":"DnaJ domain"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.150","interpro_description":"C2 domain superfamily","interpro_id":"IPR035892","interpro_name":"C2_domain_sf","locations":[{"end":556,"start":430}],"match_end":556,"match_start":430,"name":"C2 domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.3380.10","locations":[{"end":332,"start":234}],"match_end":332,"match_start":234},{"dbname":"PANTHER","id":"PTHR24075","locations":[{"end":586,"start":2}],"match_end":586,"match_start":2,"name":"SEC63 DOMAIN-CONTAINING"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":631,"start":558}],"match_end":631,"match_start":558,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":592,"start":569},{"end":614,"start":604}],"match_end":614,"match_start":569,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":568,"start":558},{"end":631,"start":615}],"match_end":631,"match_start":558,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3896441,"start_pos":3894441,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":22,"start":12}},{"range":{"end":206,"start":195}},{"range":{"end":600,"start":573}},{"range":{"end":615,"start":603}}],"name":"sec63","ortholog_annotations":[{"gene_uniquename":"SJAG_00175","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21082","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00175","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC36B7.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00175","ortholog_taxonid":4932,"ortholog_uniquename":"YOR254C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00175","ortholog_taxonid":4932,"ortholog_uniquename":"YOR254C","reference_uniquename":"PMID:26896847"}],"product":"ER protein translocation subcomplex DNAJ domain subunit Sec63","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:21802294":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008320"]}},"subset_termids":["GO:0005789","GO:0006605","GO:0140318","GO:0005938","MONDO:0002515","MONDO:0004335","GO:0055085","GO:0022857","MONDO:0000426","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0006614":null,"GO:0006620":null,"GO:0008320":null,"GO:0031207":null,"GO:0032541":null,"GO:0071806":null,"MONDO:0014860":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":29,"start":10}},{"assigned_by":"TMHMM","range":{"end":89,"start":70}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00175.1"],"transcripts_by_uniquename":{"SJAG_00175.1":null},"uniprot_identifier":"B6JXN5","uniquename":"SJAG_00175"}


id: SJAG_00176
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109944],"is_not":false,"summary":null,"term":"GO:0035621"},{"annotations":[109945],"is_not":false,"summary":null,"term":"GO:0030148"}],"cellular_component":[{"annotations":[109942],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109943],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05180","InterPro:IPR033394","EnsemblGenomes-Gn:SJAG_00176","InterPro:IPR013931","GOA:B6JXN6","UniProtKB/TrEMBL:B6JXN6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00182"},{"name":"ape2","uniquename":"SJAG_00181"},{"uniquename":"SJAG_00179"},{"name":"mex67","uniquename":"SJAG_00178"},{"name":"rad60","uniquename":"SJAG_00177"},{"name":"svf2","uniquename":"SJAG_00176"},{"name":"sec63","uniquename":"SJAG_00175"},{"name":"dus1","uniquename":"SJAG_00174"},{"name":"pib1","uniquename":"SJAG_00173"},{"name":"mug20","uniquename":"SJAG_00172"},{"name":"tlg1","uniquename":"SJAG_00171"}],"genes_by_uniquename":{"SJAG_00176":null,"SPBC36B7.02":null,"YDR346C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Svf1-like C-terminal lipocalin-like domain","id":"PF17187","interpro_description":"Svf1-like, C-terminal","interpro_id":"IPR033394","interpro_name":"Svf1-like_C","locations":[{"end":343,"start":179}],"match_end":343,"match_start":179,"name":"Svf1_C"},{"dbname":"PFAM","description":"Svf1-like N-terminal lipocalin domain","id":"PF08622","interpro_description":"Svf1-like, N-terminal","interpro_id":"IPR013931","interpro_name":"Svf1-like_N","locations":[{"end":175,"start":23}],"match_end":175,"match_start":23,"name":"Svf1"},{"dbname":"PANTHER","id":"PTHR47107","interpro_description":"Ceramide-binding SVF1-like","interpro_id":"IPR051385","interpro_name":"Ceramide-binding_SVF1","locations":[{"end":343,"start":5}],"match_end":343,"match_start":5,"name":"SVF1-LIKE PROTEIN YDR222W-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3893653,"start_pos":3892598,"strand":"forward"},"name":"svf2","ortholog_annotations":[{"gene_uniquename":"SJAG_00176","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC36B7.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00176","ortholog_taxonid":4932,"ortholog_uniquename":"YDR346C","reference_uniquename":"PMID:29761456"}],"product":"ER to Golgi ceramide transport protein, lipocalin superfamily Svf2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0006629","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0030148":null,"GO:0035621":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00176.1"],"transcripts_by_uniquename":{"SJAG_00176.1":null},"uniprot_identifier":"B6JXN6","uniquename":"SJAG_00176"}


id: SJAG_00177
data:
  {"coiled_coil_coords":[{"range":{"end":188,"start":168}}],"cv_annotations":{"biological_process":[{"annotations":[106065],"is_not":false,"summary":null,"term":"GO:0000724"},{"annotations":[106066],"is_not":false,"summary":null,"term":"GO:0031297"}],"cellular_component":[{"annotations":[106064],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[106067],"is_not":false,"summary":null,"term":"GO:0180016"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05181","UniProtKB/TrEMBL:B6JXN7","GOA:B6JXN7","InterPro:IPR018247","InterPro:IPR000626","InterPro:IPR022617","InterPro:IPR029071","EnsemblGenomes-Gn:SJAG_00177"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":108,"start":28}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pvg3","uniquename":"SJAG_00183"},{"uniquename":"SJAG_00182"},{"name":"ape2","uniquename":"SJAG_00181"},{"uniquename":"SJAG_00179"},{"name":"mex67","uniquename":"SJAG_00178"},{"name":"rad60","uniquename":"SJAG_00177"},{"name":"svf2","uniquename":"SJAG_00176"},{"name":"sec63","uniquename":"SJAG_00175"},{"name":"dus1","uniquename":"SJAG_00174"},{"name":"pib1","uniquename":"SJAG_00173"},{"name":"mug20","uniquename":"SJAG_00172"}],"genes_by_uniquename":{"HGNC:25906":null,"SJAG_00177":null,"SPBC1921.02":null,"YDR363W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ubiquitin-2 like Rad60 SUMO-like","id":"PF11976","interpro_description":"Rad60/SUMO-like domain","interpro_id":"IPR022617","interpro_name":"Rad60/SUMO-like_dom","locations":[{"end":334,"start":281},{"end":449,"start":379}],"match_end":449,"match_start":281,"name":"Rad60-SLD"},{"dbname":"CDD","description":"Ubl_SUMO_like","id":"cd01763","locations":[{"end":329,"start":277}],"match_end":329,"match_start":277,"name":"Ubl_SUMO_like"},{"dbname":"PROSITE_PATTERNS","description":"EF-hand calcium-binding domain.","id":"PS00018","interpro_description":"EF-Hand 1, calcium-binding site","interpro_id":"IPR018247","interpro_name":"EF_Hand_1_Ca_BS","locations":[{"end":128,"start":116}],"match_end":128,"match_start":116,"name":"EF_HAND_1"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin domain profile.","id":"PS50053","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":449,"start":378}],"match_end":449,"match_start":378,"name":"UBIQUITIN_2"},{"dbname":"SUPERFAMILY","id":"SSF54236","interpro_description":"Ubiquitin-like domain superfamily","interpro_id":"IPR029071","interpro_name":"Ubiquitin-like_domsf","locations":[{"end":333,"start":280},{"end":448,"start":364}],"match_end":448,"match_start":280,"name":"Ubiquitin-like"},{"dbname":"GENE3D","id":"G3DSA:3.10.20.90","locations":[{"end":343,"start":249},{"end":449,"start":372}],"match_end":449,"match_start":249},{"dbname":"PANTHER","id":"PTHR10562","locations":[{"end":335,"start":261}],"match_end":335,"match_start":261,"name":"SMALL UBIQUITIN-RELATED MODIFIER"},{"dbname":"COILS","id":"Coil","locations":[{"end":188,"start":168}],"match_end":188,"match_start":168,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":108,"start":28}],"match_end":108,"match_start":28,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":44,"start":34}],"match_end":44,"match_start":34,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":85,"start":58}],"match_end":85,"match_start":58,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3891515,"start_pos":3890038,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":44,"start":25}},{"range":{"end":119,"start":112}},{"range":{"end":184,"start":144}},{"range":{"end":202,"start":187}},{"range":{"end":251,"start":239}},{"range":{"end":370,"start":361}},{"range":{"end":444,"start":434}}],"name":"rad60","ortholog_annotations":[{"gene_uniquename":"SJAG_00177","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25906","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00177","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1921.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00177","ortholog_taxonid":4932,"ortholog_uniquename":"YDR363W","reference_uniquename":"PMID:29761456"}],"product":"DNA repair protein, SUMO-related Rad60","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0180016"]}},"subset_termids":["GO:0030234","GO:0016874","GO:0006310","GO:0006281","GO:0006260","GO:0098772","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000724":null,"GO:0005634":null,"GO:0031297":null,"GO:0180016":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00177.1"],"transcripts_by_uniquename":{"SJAG_00177.1":null},"uniprot_identifier":"B6JXN7","uniquename":"SJAG_00177"}


id: SJAG_00178
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73357],"is_not":false,"summary":null,"term":"GO:0016973"},{"annotations":[106075],"is_not":false,"summary":null,"term":"GO:0000055"},{"annotations":[106076],"is_not":false,"summary":null,"term":"GO:0006409"}],"cellular_component":[{"annotations":[106068],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106069],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[106070],"is_not":false,"summary":null,"term":"GO:0042272"},{"annotations":[106071],"is_not":false,"summary":null,"term":"GO:0140602"},{"annotations":[106072],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[73359],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR032675","InterPro:IPR032710","EnsemblGenomes-Gn:SJAG_00178","InterPro:IPR001611","EnsemblGenomes-Tr:EEB05182","InterPro:IPR030217","InterPro:IPR040736","UniProtKB/TrEMBL:B6JXN8","InterPro:IPR009060","InterPro:IPR018222","InterPro:IPR005637","GOA:B6JXN8"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":37,"start":1}},{"range":{"end":132,"start":107}},{"range":{"end":390,"start":366}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sgf29","uniquename":"SJAG_00184"},{"name":"pvg3","uniquename":"SJAG_00183"},{"uniquename":"SJAG_00182"},{"name":"ape2","uniquename":"SJAG_00181"},{"uniquename":"SJAG_00179"},{"name":"mex67","uniquename":"SJAG_00178"},{"name":"rad60","uniquename":"SJAG_00177"},{"name":"svf2","uniquename":"SJAG_00176"},{"name":"sec63","uniquename":"SJAG_00175"},{"name":"dus1","uniquename":"SJAG_00174"},{"name":"pib1","uniquename":"SJAG_00173"}],"genes_by_uniquename":{"HGNC:8071":null,"HGNC:8073":null,"SJAG_00178":null,"SPBC1921.03c":null,"YPL169C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"NXF1/2/3/5 leucine-rich repeat domain","id":"PF24048","locations":[{"end":300,"start":152}],"match_end":300,"match_start":152,"name":"LRR_NXF1-5"},{"dbname":"PFAM","description":"Nuclear RNA export factor, NTF2 domain","id":"PF22602","interpro_description":"Nuclear transport factor 2 domain","interpro_id":"IPR002075","interpro_name":"NTF2_dom","locations":[{"end":498,"start":332}],"match_end":498,"match_start":332,"name":"NXF_NTF2"},{"dbname":"PFAM","description":"RNA recognition motif","id":"PF18444","interpro_description":"Mex67, RNA recognition motif","interpro_id":"IPR040736","interpro_name":"Mex67_RRM","locations":[{"end":107,"start":39}],"match_end":107,"match_start":39,"name":"RRM_9"},{"dbname":"PFAM","description":"TAP C-terminal domain","id":"PF03943","interpro_description":"TAP C-terminal (TAP-C) domain","interpro_id":"IPR005637","interpro_name":"TAP_C_dom","locations":[{"end":611,"start":563}],"match_end":611,"match_start":563,"name":"TAP_C"},{"dbname":"CDD","description":"UBA_TAP-C","id":"cd14342","interpro_description":"TAP C-terminal (TAP-C) domain","interpro_id":"IPR005637","interpro_name":"TAP_C_dom","locations":[{"end":611,"start":562}],"match_end":611,"match_start":562,"name":"UBA_TAP-C"},{"dbname":"PROSITE_PROFILES","description":"TAP C-terminal (TAP-C) domain profile.","id":"PS51281","interpro_description":"TAP C-terminal (TAP-C) domain","interpro_id":"IPR005637","interpro_name":"TAP_C_dom","locations":[{"end":612,"start":559}],"match_end":612,"match_start":559,"name":"TAP_C"},{"dbname":"PROSITE_PROFILES","description":"Nuclear transport factor 2 domain profile.","id":"PS50177","interpro_description":"Nuclear transport factor 2, eukaryote","interpro_id":"IPR018222","interpro_name":"Nuclear_transport_factor_2_euk","locations":[{"end":497,"start":331}],"match_end":497,"match_start":331,"name":"NTF2_DOMAIN"},{"dbname":"PROSITE_PROFILES","description":"Leucine-rich repeat profile.","id":"PS51450","interpro_description":"Leucine-rich repeat","interpro_id":"IPR001611","interpro_name":"Leu-rich_rpt","locations":[{"end":254,"start":233}],"match_end":254,"match_start":233,"name":"LRR"},{"dbname":"SMART","id":"SM00804","interpro_description":"TAP C-terminal (TAP-C) domain","interpro_id":"IPR005637","interpro_name":"TAP_C_dom","locations":[{"end":612,"start":551}],"match_end":612,"match_start":551,"name":"TAP_C_cls"},{"dbname":"FUNFAM","description":"Nuclear RNA export factor 1","id":"G3DSA:1.10.8.10:FF:000018","locations":[{"end":612,"start":551}],"match_end":612,"match_start":551},{"dbname":"SUPERFAMILY","id":"SSF54427","interpro_description":"NTF2-like domain superfamily","interpro_id":"IPR032710","interpro_name":"NTF2-like_dom_sf","locations":[{"end":514,"start":322}],"match_end":514,"match_start":322,"name":"NTF2-like"},{"dbname":"SUPERFAMILY","id":"SSF46934","interpro_description":"UBA-like superfamily","interpro_id":"IPR009060","interpro_name":"UBA-like_sf","locations":[{"end":611,"start":556}],"match_end":611,"match_start":556,"name":"UBA-like"},{"dbname":"SUPERFAMILY","id":"SSF52058","locations":[{"end":306,"start":147}],"match_end":306,"match_start":147,"name":"L domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.80.10.10","interpro_description":"Leucine-rich repeat domain superfamily","interpro_id":"IPR032675","interpro_name":"LRR_dom_sf","locations":[{"end":306,"start":145}],"match_end":306,"match_start":145,"name":"Ribonuclease Inhibitor"},{"dbname":"GENE3D","id":"G3DSA:1.10.8.10","locations":[{"end":612,"start":551}],"match_end":612,"match_start":551},{"dbname":"GENE3D","id":"G3DSA:3.10.450.50","locations":[{"end":509,"start":317}],"match_end":509,"match_start":317},{"dbname":"PANTHER","id":"PTHR10662","interpro_description":"Nuclear RNA export factor","interpro_id":"IPR030217","interpro_name":"NXF_fam","locations":[{"end":611,"start":6}],"match_end":611,"match_start":6,"name":"NUCLEAR RNA EXPORT FACTOR"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":37,"start":1},{"end":132,"start":107},{"end":390,"start":366}],"match_end":390,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":389,"start":375}],"match_end":389,"match_start":375,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":37,"start":23}],"match_end":37,"match_start":23,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":11,"start":1},{"end":132,"start":118}],"match_end":132,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3889713,"start_pos":3887875,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":13,"start":2}},{"range":{"end":136,"start":103}},{"range":{"end":373,"start":359}},{"range":{"end":564,"start":510}}],"name":"mex67","ortholog_annotations":[{"gene_uniquename":"SJAG_00178","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8071","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00178","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8073","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00178","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1921.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00178","ortholog_taxonid":4932,"ortholog_uniquename":"YPL169C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00178","ortholog_taxonid":4932,"ortholog_uniquename":"YPL169C","reference_uniquename":"PMID:26896847"}],"product":"mRNA export receptor, Tap, nucleoporin Mex67","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0042254","GO:0005829","GO:0006913","GO:0005643","GO:0005730","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000055":null,"GO:0003723":null,"GO:0005643":null,"GO:0005730":null,"GO:0005829":null,"GO:0006409":null,"GO:0016973":null,"GO:0042272":null,"GO:0140602":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00178.1"],"transcripts_by_uniquename":{"SJAG_00178.1":null},"uniprot_identifier":"B6JXN8","uniquename":"SJAG_00178"}


id: SJAG_00179
data:
  {"cv_annotations":{"biological_process":[{"annotations":[119073],"is_not":false,"summary":null,"term":"GO:1990748"}],"cellular_component":[{"annotations":[119071],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[119072],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[77505],"is_not":false,"summary":null,"term":"GO:0004364"}]},"dbxrefs":["InterPro:IPR040079","GOA:B6JXN9","EnsemblGenomes-Gn:SJAG_00179","InterPro:IPR004046","InterPro:IPR010987","InterPro:IPR036249","InterPro:IPR036282","UniProtKB/TrEMBL:B6JXN9","InterPro:IPR004045","EnsemblGenomes-Tr:EEB05183"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hob1","uniquename":"SJAG_00185"},{"name":"sgf29","uniquename":"SJAG_00184"},{"name":"pvg3","uniquename":"SJAG_00183"},{"uniquename":"SJAG_00182"},{"name":"ape2","uniquename":"SJAG_00181"},{"uniquename":"SJAG_00179"},{"name":"mex67","uniquename":"SJAG_00178"},{"name":"rad60","uniquename":"SJAG_00177"},{"name":"svf2","uniquename":"SJAG_00176"},{"name":"sec63","uniquename":"SJAG_00175"},{"name":"dus1","uniquename":"SJAG_00174"}],"genes_by_uniquename":{"HGNC:4641":null,"HGNC:4642":null,"SJAG_00179":null,"SPCC191.09c":null,"SPCC965.07c":null,"YNL229C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glutathione S-transferase, N-terminal domain","id":"PF02798","interpro_description":"Glutathione S-transferase, N-terminal","interpro_id":"IPR004045","interpro_name":"Glutathione_S-Trfase_N","locations":[{"end":79,"start":3}],"match_end":79,"match_start":3,"name":"GST_N"},{"dbname":"PFAM","description":"Glutathione S-transferase, C-terminal domain","id":"PF00043","interpro_description":"Glutathione S-transferase, C-terminal","interpro_id":"IPR004046","interpro_name":"GST_C","locations":[{"end":214,"start":137}],"match_end":214,"match_start":137,"name":"GST_C"},{"dbname":"CDD","description":"GST_N_Ure2p_like","id":"cd03048","locations":[{"end":84,"start":3}],"match_end":84,"match_start":3,"name":"GST_N_Ure2p_like"},{"dbname":"PROSITE_PROFILES","description":"Soluble glutathione S-transferase N-terminal domain profile.","id":"PS50404","interpro_description":"Glutathione S-transferase, N-terminal","interpro_id":"IPR004045","interpro_name":"Glutathione_S-Trfase_N","locations":[{"end":86,"start":2}],"match_end":86,"match_start":2,"name":"GST_NTER"},{"dbname":"PROSITE_PROFILES","description":"Soluble glutathione S-transferase C-terminal domain profile.","id":"PS50405","interpro_description":"Glutathione S-transferase, C-terminal-like","interpro_id":"IPR010987","interpro_name":"Glutathione-S-Trfase_C-like","locations":[{"end":228,"start":93}],"match_end":228,"match_start":93,"name":"GST_CTER"},{"dbname":"FUNFAM","description":"Glutathione S-transferase 1","id":"G3DSA:1.20.1050.130:FF:000016","locations":[{"end":228,"start":1}],"match_end":228,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF52833","interpro_description":"Thioredoxin-like superfamily","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like_sf","locations":[{"end":85,"start":1}],"match_end":85,"match_start":1,"name":"Thioredoxin-like"},{"dbname":"SUPERFAMILY","id":"SSF47616","interpro_description":"Glutathione S-transferase, C-terminal domain superfamily","interpro_id":"IPR036282","interpro_name":"Glutathione-S-Trfase_C_sf","locations":[{"end":223,"start":77}],"match_end":223,"match_start":77,"name":"GST C-terminal domain-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.1050.130","locations":[{"end":227,"start":1}],"match_end":227,"match_start":1},{"dbname":"PANTHER","id":"PTHR44051","locations":[{"end":222,"start":2}],"match_end":222,"match_start":2,"name":"GLUTATHIONE S-TRANSFERASE-RELATED"},{"dbname":"SFLD","description":"Main.2: Nu-like","id":"SFLDG01151","locations":[{"end":224,"start":3}],"match_end":224,"match_start":3,"name":"Main.2:_Nu-like"},{"dbname":"SFLD","description":"Glutathione Transferase (cytosolic)","id":"SFLDS00019","interpro_description":"Glutathione transferase family","interpro_id":"IPR040079","interpro_name":"Glutathione_S-Trfase","locations":[{"end":224,"start":3}],"match_end":224,"match_start":3,"name":"Glutathione_Transferase_(cyto"}],"location":{"chromosome_name":"supercont5.1","end_pos":3886865,"start_pos":3886179,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00179","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4641","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00179","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4641","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00179","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4642","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00179","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4642","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00179","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC191.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00179","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC965.07c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00179","ortholog_taxonid":4932,"ortholog_uniquename":"YNL229C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00179","ortholog_taxonid":4932,"ortholog_uniquename":"YNL229C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00179","ortholog_taxonid":4932,"ortholog_uniquename":"YNL229C","reference_uniquename":"PMID:26896847"}],"product":"glutathione S-transferase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004364"]}},"subset_termids":["GO:0005634","GO:0098754","GO:0016765","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004364":null,"GO:0005634":null,"GO:0005829":null,"GO:1990748":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00179.1"],"transcripts_by_uniquename":{"SJAG_00179.1":null},"uniprot_identifier":"B6JXN9","uniquename":"SJAG_00179"}


id: SJAG_00181
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":318,"start":318}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":317,"start":317}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":321,"start":321}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":340,"start":340}}],"cv_annotations":{"biological_process":[{"annotations":[106083],"is_not":false,"summary":null,"term":"GO:0120113"},{"annotations":[73020],"is_not":false,"summary":null,"term":"GO:0043171"},{"annotations":[106085],"is_not":false,"summary":null,"term":"GO:0016485"}],"cellular_component":[{"annotations":[106078],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106079],"is_not":false,"summary":null,"term":"GO:0000328"},{"annotations":[73022],"is_not":false,"summary":null,"term":"GO:0016020"},{"annotations":[106081],"is_not":false,"summary":null,"term":"GO:0005771"},{"annotations":[106082],"is_not":false,"summary":null,"term":"GO:0061957"}],"molecular_function":[{"annotations":[106086],"is_not":false,"summary":null,"term":"GO:0030145"},{"annotations":[73023],"is_not":false,"summary":null,"term":"GO:0070006"},{"annotations":[73018],"is_not":false,"summary":null,"term":"GO:0042277"},{"annotations":[73019],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JXP0","InterPro:IPR014782","EnsemblGenomes-Gn:SJAG_00181","InterPro:IPR034016","InterPro:IPR001930","EnsemblGenomes-Tr:EEB05184","InterPro:IPR042097","GOA:B6JXP0","InterPro:IPR024571"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nfs1","uniquename":"SJAG_00186"},{"name":"hob1","uniquename":"SJAG_00185"},{"name":"sgf29","uniquename":"SJAG_00184"},{"name":"pvg3","uniquename":"SJAG_00183"},{"uniquename":"SJAG_00182"},{"name":"ape2","uniquename":"SJAG_00181"},{"uniquename":"SJAG_00179"},{"name":"mex67","uniquename":"SJAG_00178"},{"name":"rad60","uniquename":"SJAG_00177"},{"name":"svf2","uniquename":"SJAG_00176"},{"name":"sec63","uniquename":"SJAG_00175"}],"genes_by_uniquename":{"HGNC:7900":null,"SJAG_00181":null,"SPBC1921.05":null,"YHR047C":null,"YIL137C":null,"YKL157W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Peptidase family M1 domain","id":"PF01433","interpro_description":"Peptidase M1, membrane alanine aminopeptidase","interpro_id":"IPR014782","interpro_name":"Peptidase_M1_dom","locations":[{"end":462,"start":246}],"match_end":462,"match_start":246,"name":"Peptidase_M1"},{"dbname":"PFAM","description":"Peptidase M1 N-terminal domain","id":"PF17900","interpro_description":"Aminopeptidase N-like , N-terminal domain","interpro_id":"IPR045357","interpro_name":"Aminopeptidase_N-like_N","locations":[{"end":207,"start":24}],"match_end":207,"match_start":24,"name":"Peptidase_M1_N"},{"dbname":"PFAM","description":"ERAP1-like C-terminal domain","id":"PF11838","interpro_description":"ERAP1-like C-terminal domain","interpro_id":"IPR024571","interpro_name":"ERAP1-like_C_dom","locations":[{"end":859,"start":541}],"match_end":859,"match_start":541,"name":"ERAP1_C"},{"dbname":"CDD","description":"M1_APN-Q_like","id":"cd09601","interpro_description":"Aminopeptidase N-type","interpro_id":"IPR034016","interpro_name":"M1_APN-typ","locations":[{"end":464,"start":26}],"match_end":464,"match_start":26,"name":"M1_APN-Q_like"},{"dbname":"PRINTS","description":"Membrane alanyl dipeptidase (M1) family signature","id":"PR00756","interpro_description":"Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase","interpro_id":"IPR001930","interpro_name":"Peptidase_M1","locations":[{"end":165,"start":150},{"end":212,"start":197},{"end":289,"start":279},{"end":329,"start":314},{"end":345,"start":333}],"match_end":345,"match_start":150,"name":"ALADIPTASE"},{"dbname":"FUNFAM","description":"Aminopeptidase","id":"G3DSA:2.60.40.1910:FF:000004","locations":[{"end":555,"start":468}],"match_end":555,"match_start":468},{"dbname":"FUNFAM","description":"Aminopeptidase","id":"G3DSA:1.25.50.20:FF:000002","locations":[{"end":879,"start":560}],"match_end":879,"match_start":560},{"dbname":"FUNFAM","description":"Aminopeptidase","id":"G3DSA:1.10.390.10:FF:000001","locations":[{"end":467,"start":221}],"match_end":467,"match_start":221},{"dbname":"FUNFAM","description":"Aminopeptidase","id":"G3DSA:2.60.40.1730:FF:000002","locations":[{"end":215,"start":10}],"match_end":215,"match_start":10},{"dbname":"SUPERFAMILY","id":"SSF63737","interpro_description":"Aminopeptidase N-like , N-terminal domain superfamliy","interpro_id":"IPR042097","interpro_name":"Aminopeptidase_N-like_N_sf","locations":[{"end":214,"start":15}],"match_end":214,"match_start":15,"name":"Leukotriene A4 hydrolase N-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF55486","locations":[{"end":473,"start":229}],"match_end":473,"match_start":229,"name":"Metalloproteases (\"zincins\"), catalytic domain"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.1910","locations":[{"end":555,"start":468}],"match_end":555,"match_start":468},{"dbname":"GENE3D","id":"G3DSA:1.10.390.10","interpro_description":"Peptidase M4/M1, CTD superfamily","interpro_id":"IPR027268","interpro_name":"Peptidase_M4/M1_CTD_sf","locations":[{"end":467,"start":220}],"match_end":467,"match_start":220,"name":"Neutral Protease Domain 2"},{"dbname":"GENE3D","id":"G3DSA:1.25.50.20","locations":[{"end":879,"start":558}],"match_end":879,"match_start":558},{"dbname":"GENE3D","id":"G3DSA:2.60.40.1730","interpro_description":"Aminopeptidase N-like , N-terminal domain superfamliy","interpro_id":"IPR042097","interpro_name":"Aminopeptidase_N-like_N_sf","locations":[{"end":214,"start":8}],"match_end":214,"match_start":8,"name":"tricorn interacting facor f3 domain"},{"dbname":"PANTHER","id":"PTHR11533","interpro_description":"Peptidase M1 family aminopeptidases","interpro_id":"IPR050344","interpro_name":"Peptidase_M1_aminopeptidases","locations":[{"end":876,"start":8}],"match_end":876,"match_start":8,"name":"PROTEASE M1 ZINC METALLOPROTEASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3884178,"start_pos":3881527,"strand":"reverse"},"name":"ape2","ortholog_annotations":[{"gene_uniquename":"SJAG_00181","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7900","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00181","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1921.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00181","ortholog_taxonid":4932,"ortholog_uniquename":"YHR047C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00181","ortholog_taxonid":4932,"ortholog_uniquename":"YHR047C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00181","ortholog_taxonid":4932,"ortholog_uniquename":"YIL137C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00181","ortholog_taxonid":4932,"ortholog_uniquename":"YKL157W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00181","ortholog_taxonid":4932,"ortholog_uniquename":"YKL157W","reference_uniquename":"PMID:26896847"}],"product":"vacuolar aminopeptidase Ape2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030145","GO:0042277","GO:0008270"],"not-binding":["GO:0070006"]}},"subset_termids":["GO:0005773","GO:0005829","GO:0005768","GO:0008233","GO:0006605","GO:0051604","GO:0140096","GO:0031410"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000328":null,"GO:0005771":null,"GO:0005829":null,"GO:0008270":null,"GO:0016020":null,"GO:0016485":null,"GO:0030145":null,"GO:0042277":null,"GO:0043171":null,"GO:0061957":null,"GO:0070006":null,"GO:0120113":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00181.1"],"transcripts_by_uniquename":{"SJAG_00181.1":null},"uniprot_identifier":"B6JXP0","uniquename":"SJAG_00181"}


id: SJAG_00182
data:
  {"cv_annotations":{"biological_process":[{"annotations":[62635],"is_not":false,"summary":null,"term":"GO:0005992"}],"cellular_component":[{"annotations":[74815],"is_not":false,"summary":null,"term":"GO:0005946"}]},"dbxrefs":["InterPro:IPR003337","EnsemblGenomes-Tr:EEB05185","EnsemblGenomes-Gn:SJAG_00182","InterPro:IPR023214","InterPro:IPR036412","UniProtKB/TrEMBL:B6JXP1","GOA:B6JXP1","InterPro:IPR001830"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":171,"start":128}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bdc1","uniquename":"SJAG_00187"},{"name":"nfs1","uniquename":"SJAG_00186"},{"name":"hob1","uniquename":"SJAG_00185"},{"name":"sgf29","uniquename":"SJAG_00184"},{"name":"pvg3","uniquename":"SJAG_00183"},{"uniquename":"SJAG_00182"},{"name":"ape2","uniquename":"SJAG_00181"},{"uniquename":"SJAG_00179"},{"name":"mex67","uniquename":"SJAG_00178"},{"name":"rad60","uniquename":"SJAG_00177"},{"name":"svf2","uniquename":"SJAG_00176"}],"genes_by_uniquename":{"SJAG_00182":null,"YML100W":null,"YMR261C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycosyltransferase family 20","id":"PF00982","interpro_description":"Glycosyl transferase, family 20","interpro_id":"IPR001830","interpro_name":"Glyco_trans_20","locations":[{"end":632,"start":186}],"match_end":632,"match_start":186,"name":"Glyco_transf_20"},{"dbname":"PFAM","description":"Trehalose-phosphatase","id":"PF02358","interpro_description":"Trehalose-phosphatase","interpro_id":"IPR003337","interpro_name":"Trehalose_PPase","locations":[{"end":899,"start":669}],"match_end":899,"match_start":669,"name":"Trehalose_PPase"},{"dbname":"CDD","description":"GT20_TPS","id":"cd03788","interpro_description":"Glycosyl transferase, family 20","interpro_id":"IPR001830","interpro_name":"Glyco_trans_20","locations":[{"end":626,"start":189}],"match_end":626,"match_start":189,"name":"GT20_TPS"},{"dbname":"SUPERFAMILY","id":"SSF56784","interpro_description":"HAD-like superfamily","interpro_id":"IPR036412","interpro_name":"HAD-like_sf","locations":[{"end":899,"start":665}],"match_end":899,"match_start":665,"name":"HAD-like"},{"dbname":"SUPERFAMILY","id":"SSF53756","locations":[{"end":637,"start":189}],"match_end":637,"match_start":189,"name":"UDP-Glycosyltransferase/glycogen phosphorylase"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1000","interpro_description":"HAD superfamily","interpro_id":"IPR023214","interpro_name":"HAD_sf","locations":[{"end":754,"start":668},{"end":900,"start":834}],"match_end":900,"match_start":668},{"dbname":"GENE3D","id":"G3DSA:3.40.50.2000","locations":[{"end":617,"start":164}],"match_end":617,"match_start":164,"name":"Glycogen Phosphorylase B;"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.1020","locations":[{"end":833,"start":755}],"match_end":833,"match_start":755},{"dbname":"PANTHER","id":"PTHR10788","interpro_description":"Glycosyl transferase, family 20","interpro_id":"IPR001830","interpro_name":"Glyco_trans_20","locations":[{"end":901,"start":187}],"match_end":901,"match_start":187,"name":"TREHALOSE-6-PHOSPHATE SYNTHASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":171,"start":128}],"match_end":171,"match_start":128,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3880740,"start_pos":3877981,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":95,"start":85}},{"range":{"end":540,"start":526}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00182","ortholog_taxonid":4932,"ortholog_uniquename":"YML100W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00182","ortholog_taxonid":4932,"ortholog_uniquename":"YMR261C","reference_uniquename":"PMID:26896847"}],"product":"trehalose 6-phosphate synthase/phosphatase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:26896847":null},"split_by_parent_groups":{},"subset_termids":["GO:0005975"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005946":null,"GO:0005992":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00182.1"],"transcripts_by_uniquename":{"SJAG_00182.1":null},"uniprot_identifier":"B6JXP1","uniquename":"SJAG_00182"}


id: SJAG_00183
data:
  {"cv_annotations":{"biological_process":[{"annotations":[79774],"is_not":false,"summary":null,"term":"GO:0051072"},{"annotations":[68920],"is_not":false,"summary":null,"term":"GO:0006486"}],"cellular_component":[{"annotations":[106090],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[68918],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[106094],"is_not":false,"summary":null,"term":"GO:0047220"}],"mondo":[{"annotations":[85389],"is_not":false,"summary":null,"term":"MONDO:0012282"},{"annotations":[86356],"is_not":false,"summary":null,"term":"MONDO:0014139"},{"annotations":[87063],"is_not":false,"summary":null,"term":"MONDO:0010075"}]},"dbxrefs":["InterPro:IPR002659","GOA:B6JXP2","EnsemblGenomes-Tr:EEB05186","EnsemblGenomes-Gn:SJAG_00183","UniProtKB/TrEMBL:B6JXP2"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rkr1","uniquename":"SJAG_00188"},{"name":"bdc1","uniquename":"SJAG_00187"},{"name":"nfs1","uniquename":"SJAG_00186"},{"name":"hob1","uniquename":"SJAG_00185"},{"name":"sgf29","uniquename":"SJAG_00184"},{"name":"pvg3","uniquename":"SJAG_00183"},{"uniquename":"SJAG_00182"},{"name":"ape2","uniquename":"SJAG_00181"},{"uniquename":"SJAG_00179"},{"name":"mex67","uniquename":"SJAG_00178"},{"name":"rad60","uniquename":"SJAG_00177"}],"genes_by_uniquename":{"HGNC:15683":null,"HGNC:15684":null,"HGNC:17978":null,"HGNC:24139":null,"SJAG_00183":null,"SPBC1921.06c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"GENE3D","id":"G3DSA:3.90.550.50","locations":[{"end":360,"start":148}],"match_end":360,"match_start":148},{"dbname":"PANTHER","id":"PTHR11214","interpro_description":"Glycosyl transferase, family 31","interpro_id":"IPR002659","interpro_name":"Glyco_trans_31","locations":[{"end":315,"start":61}],"match_end":315,"match_start":61,"name":"BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3877355,"start_pos":3876141,"strand":"forward"},"name":"pvg3","ortholog_annotations":[{"gene_uniquename":"SJAG_00183","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15683","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00183","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15684","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00183","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17978","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00183","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24139","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00183","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1921.06c","reference_uniquename":"PMID:21511999"}],"product":"Golgi galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0047220"]}},"subset_termids":["MONDO:0024322","GO:0005794","GO:0005975","GO:0016757","GO:0006486","MONDO:0005497","GO:0140096","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0006486":null,"GO:0016020":null,"GO:0047220":null,"GO:0051072":null,"MONDO:0010075":null,"MONDO:0012282":null,"MONDO:0014139":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":31,"start":12}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00183.1"],"transcripts_by_uniquename":{"SJAG_00183.1":null},"uniprot_identifier":"B6JXP2","uniquename":"SJAG_00183"}


id: SJAG_00184
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106098],"is_not":false,"summary":null,"term":"GO:0006357"},{"annotations":[106099],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[106095],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106096],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[77471],"is_not":false,"summary":null,"term":"GO:0000124"}],"molecular_function":[{"annotations":[77470],"is_not":false,"summary":null,"term":"GO:0035064"},{"annotations":[106100],"is_not":false,"summary":null,"term":"GO:0003713"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05187","InterPro:IPR037802","InterPro:IPR010750","EnsemblGenomes-Gn:SJAG_00184","UniProtKB/TrEMBL:B6JXP3","GOA:B6JXP3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":115,"start":88}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00189"},{"name":"rkr1","uniquename":"SJAG_00188"},{"name":"bdc1","uniquename":"SJAG_00187"},{"name":"nfs1","uniquename":"SJAG_00186"},{"name":"hob1","uniquename":"SJAG_00185"},{"name":"sgf29","uniquename":"SJAG_00184"},{"name":"pvg3","uniquename":"SJAG_00183"},{"uniquename":"SJAG_00182"},{"name":"ape2","uniquename":"SJAG_00181"},{"uniquename":"SJAG_00179"},{"name":"mex67","uniquename":"SJAG_00178"}],"genes_by_uniquename":{"HGNC:25156":null,"SJAG_00184":null,"SPBC1921.07c":null,"YCL010C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SGF29 tudor-like domain","id":"PF07039","interpro_description":"SGF29 tudor-like domain","interpro_id":"IPR010750","interpro_name":"SGF29_tudor-like_dom","locations":[{"end":246,"start":119}],"match_end":246,"match_start":119,"name":"SGF29_Tudor"},{"dbname":"CDD","description":"Tudor_SGF29_rpt1","id":"cd20393","interpro_description":"SAGA-associated factor 29, first Tudor domain","interpro_id":"IPR047288","interpro_name":"Tudor_SGF29_rpt1","locations":[{"end":186,"start":116}],"match_end":186,"match_start":116,"name":"Tudor_SGF29_rpt1"},{"dbname":"PROSITE_PROFILES","description":"SGF29 C-terminal domain profile.","id":"PS51518","interpro_description":"SGF29 tudor-like domain","interpro_id":"IPR010750","interpro_name":"SGF29_tudor-like_dom","locations":[{"end":248,"start":113}],"match_end":248,"match_start":113,"name":"SGF29_C"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.140","locations":[{"end":248,"start":188}],"match_end":248,"match_start":188},{"dbname":"PANTHER","id":"PTHR21539","interpro_description":"SAGA-associated factor 29","interpro_id":"IPR037802","interpro_name":"SGF29","locations":[{"end":247,"start":32}],"match_end":247,"match_start":32,"name":"SAGA-ASSOCIATED FACTOR 29"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":115,"start":88}],"match_end":115,"match_start":88,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3875633,"start_pos":3874799,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":115,"start":97}}],"name":"sgf29","ortholog_annotations":[{"gene_uniquename":"SJAG_00184","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25156","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00184","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1921.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00184","ortholog_taxonid":4932,"ortholog_uniquename":"YCL010C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00184","ortholog_taxonid":4932,"ortholog_uniquename":"YCL010C","reference_uniquename":"PMID:26896847"}],"product":"SAGA complex subunit Sgf29","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0035064"],"not-binding":["GO:0003713"]}},"subset_termids":["GO:0060090","GO:0006325","GO:0005829","GO:0003712","GO:0003713","GO:0005694","GO:0006351","GO:0006355","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000124":null,"GO:0003713":null,"GO:0005634":null,"GO:0005829":null,"GO:0006357":null,"GO:0035064":null,"GO:0045815":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00184.1"],"transcripts_by_uniquename":{"SJAG_00184.1":null},"uniprot_identifier":"B6JXP3","uniquename":"SJAG_00184"}


id: SJAG_00185
data:
  {"coiled_coil_coords":[{"range":{"end":52,"start":32}},{"range":{"end":176,"start":156}}],"cv_annotations":{"biological_process":[{"annotations":[74304],"is_not":false,"summary":null,"term":"GO:0051666"},{"annotations":[74301],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[107218],"is_not":false,"summary":null,"term":"GO:0007163"},{"annotations":[74303],"is_not":false,"summary":null,"term":"GO:0097320"}],"cellular_component":[{"annotations":[74298],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[74296],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[74299],"is_not":false,"summary":null,"term":"GO:0031097"},{"annotations":[107214],"is_not":false,"summary":null,"term":"GO:0110085"},{"annotations":[74302],"is_not":false,"summary":null,"term":"GO:1990528"}],"molecular_function":[{"annotations":[74300],"is_not":false,"summary":null,"term":"GO:0008289"},{"annotations":[107221],"is_not":false,"summary":null,"term":"GO:0043495"}],"mondo":[{"annotations":[85802],"is_not":false,"summary":null,"term":"MONDO:0009709"}]},"dbxrefs":["InterPro:IPR027267","InterPro:IPR036028","EnsemblGenomes-Gn:SJAG_00185","GOA:B6JXP4","InterPro:IPR004148","UniProtKB/TrEMBL:B6JXP4","InterPro:IPR001452","EnsemblGenomes-Tr:EEB05188"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":359,"start":282}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cmc2","uniquename":"SJAG_05398"},{"uniquename":"SJAG_00189"},{"name":"rkr1","uniquename":"SJAG_00188"},{"name":"bdc1","uniquename":"SJAG_00187"},{"name":"nfs1","uniquename":"SJAG_00186"},{"name":"hob1","uniquename":"SJAG_00185"},{"name":"sgf29","uniquename":"SJAG_00184"},{"name":"pvg3","uniquename":"SJAG_00183"},{"uniquename":"SJAG_00182"},{"name":"ape2","uniquename":"SJAG_00181"},{"uniquename":"SJAG_00179"}],"genes_by_uniquename":{"HGNC:1052":null,"HGNC:1053":null,"HGNC:471":null,"SJAG_00185":null,"SPBC21D10.12":null,"YDR388W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"BAR domain","id":"PF03114","interpro_description":"BAR domain","interpro_id":"IPR004148","interpro_name":"BAR_dom","locations":[{"end":246,"start":6}],"match_end":246,"match_start":6,"name":"BAR"},{"dbname":"PFAM","description":"SH3 domain","id":"PF00018","interpro_description":"SH3 domain","interpro_id":"IPR001452","interpro_name":"SH3_domain","locations":[{"end":450,"start":404}],"match_end":450,"match_start":404,"name":"SH3_1"},{"dbname":"CDD","description":"BAR_Rvs167p","id":"cd07599","locations":[{"end":243,"start":29}],"match_end":243,"match_start":29,"name":"BAR_Rvs167p"},{"dbname":"PROSITE_PROFILES","description":"BAR domain profile.","id":"PS51021","interpro_description":"BAR domain","interpro_id":"IPR004148","interpro_name":"BAR_dom","locations":[{"end":269,"start":17}],"match_end":269,"match_start":17,"name":"BAR"},{"dbname":"PROSITE_PROFILES","description":"Src homology 3 (SH3) domain profile.","id":"PS50002","interpro_description":"SH3 domain","interpro_id":"IPR001452","interpro_name":"SH3_domain","locations":[{"end":456,"start":398}],"match_end":456,"match_start":398,"name":"SH3"},{"dbname":"SMART","id":"SM00326","interpro_description":"SH3 domain","interpro_id":"IPR001452","interpro_name":"SH3_domain","locations":[{"end":456,"start":401}],"match_end":456,"match_start":401,"name":"SH3_2"},{"dbname":"SMART","id":"SM00721","interpro_description":"BAR domain","interpro_id":"IPR004148","interpro_name":"BAR_dom","locations":[{"end":247,"start":5}],"match_end":247,"match_start":5,"name":"5bar"},{"dbname":"PRINTS","description":"Spectrin alpha chain signature","id":"PR01887","locations":[{"end":434,"start":400},{"end":456,"start":437}],"match_end":456,"match_start":400,"name":"SPECTRNALPHA"},{"dbname":"PRINTS","description":"SH3 domain signature","id":"PR00452","interpro_description":"SH3 domain","interpro_id":"IPR001452","interpro_name":"SH3_domain","locations":[{"end":411,"start":401},{"end":430,"start":415},{"end":443,"start":434},{"end":456,"start":445}],"match_end":456,"match_start":401,"name":"SH3DOMAIN"},{"dbname":"FUNFAM","description":"BAR adaptor protein RVS167","id":"G3DSA:1.20.1270.60:FF:000048","locations":[{"end":249,"start":2}],"match_end":249,"match_start":2},{"dbname":"FUNFAM","description":"BAR adaptor protein RVS167","id":"G3DSA:2.30.30.40:FF:000189","locations":[{"end":456,"start":383}],"match_end":456,"match_start":383},{"dbname":"SUPERFAMILY","id":"SSF103657","interpro_description":"AH/BAR domain superfamily","interpro_id":"IPR027267","interpro_name":"AH/BAR_dom_sf","locations":[{"end":241,"start":20}],"match_end":241,"match_start":20,"name":"BAR/IMD domain-like"},{"dbname":"SUPERFAMILY","id":"SSF50044","interpro_description":"SH3-like domain superfamily","interpro_id":"IPR036028","interpro_name":"SH3-like_dom_sf","locations":[{"end":456,"start":377}],"match_end":456,"match_start":377,"name":"SH3-domain"},{"dbname":"GENE3D","id":"G3DSA:1.20.1270.60","interpro_description":"AH/BAR domain superfamily","interpro_id":"IPR027267","interpro_name":"AH/BAR_dom_sf","locations":[{"end":257,"start":2}],"match_end":257,"match_start":2,"name":"Arfaptin homology (AH) domain/BAR domain"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.40","locations":[{"end":456,"start":394}],"match_end":456,"match_start":394,"name":"SH3 Domains"},{"dbname":"PANTHER","id":"PTHR47174","interpro_description":"Bridging integrator 3/RVS161-like","interpro_id":"IPR046982","interpro_name":"BIN3/RVS161-like","locations":[{"end":455,"start":1}],"match_end":455,"match_start":1,"name":"BRIDGING INTEGRATOR 3"},{"dbname":"COILS","id":"Coil","locations":[{"end":52,"start":32},{"end":176,"start":156}],"match_end":176,"match_start":32,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":359,"start":282}],"match_end":359,"match_start":282,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":300,"start":289},{"end":359,"start":334}],"match_end":359,"match_start":289,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":320,"start":306}],"match_end":320,"match_start":306,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3874194,"start_pos":3872747,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":119,"start":90}},{"range":{"end":299,"start":288}},{"range":{"end":367,"start":333}},{"range":{"end":397,"start":377}}],"name":"hob1","ortholog_annotations":[{"gene_uniquename":"SJAG_00185","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1052","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00185","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1053","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00185","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:471","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00185","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21D10.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00185","ortholog_taxonid":4932,"ortholog_uniquename":"YDR388W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00185","ortholog_taxonid":4932,"ortholog_uniquename":"YDR388W","reference_uniquename":"PMID:26896847"}],"product":"BAR adaptor protein Hob1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008289"],"not-binding":["GO:0043495"]}},"subset_termids":["GO:0060090","GO:0030479","MONDO:0002320","GO:0070938","MONDO:0005336","MONDO:0006025","GO:0008289","GO:0005938","GO:0016192","GO:0007163","GO:0061024","GO:0015629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006897":null,"GO:0007163":null,"GO:0008289":null,"GO:0030479":null,"GO:0031097":null,"GO:0043332":null,"GO:0043495":null,"GO:0051666":null,"GO:0097320":null,"GO:0110085":null,"GO:1990528":null,"MONDO:0009709":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00185.1"],"transcripts_by_uniquename":{"SJAG_00185.1":null},"uniprot_identifier":"B6JXP4","uniquename":"SJAG_00185"}


id: SJAG_00186
data:
  {"cv_annotations":{"biological_process":[{"annotations":[68042],"is_not":false,"summary":null,"term":"GO:0044571"},{"annotations":[107207],"is_not":false,"summary":null,"term":"GO:0002143"}],"cellular_component":[{"annotations":[107203],"is_not":false,"summary":null,"term":"GO:0099128"},{"annotations":[107204],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[79069],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[79072],"is_not":false,"summary":null,"term":"GO:0031071"},{"annotations":[68045],"is_not":false,"summary":null,"term":"GO:0051536"},{"annotations":[68043],"is_not":false,"summary":null,"term":"GO:0030170"}],"mondo":[{"annotations":[86890],"is_not":false,"summary":null,"term":"MONDO:0030311"}]},"dbxrefs":["GOA:B6JXP5","EnsemblGenomes-Tr:EEB05189","UniProtKB/TrEMBL:B6JXP5","InterPro:IPR010240","InterPro:IPR016454","InterPro:IPR015421","InterPro:IPR000192","InterPro:IPR015422","InterPro:IPR020578","EnsemblGenomes-Gn:SJAG_00186","InterPro:IPR015424"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00190"},{"name":"cmc2","uniquename":"SJAG_05398"},{"uniquename":"SJAG_00189"},{"name":"rkr1","uniquename":"SJAG_00188"},{"name":"bdc1","uniquename":"SJAG_00187"},{"name":"nfs1","uniquename":"SJAG_00186"},{"name":"hob1","uniquename":"SJAG_00185"},{"name":"sgf29","uniquename":"SJAG_00184"},{"name":"pvg3","uniquename":"SJAG_00183"},{"uniquename":"SJAG_00182"},{"name":"ape2","uniquename":"SJAG_00181"}],"genes_by_uniquename":{"HGNC:15910":null,"SJAG_00186":null,"SPBC21D10.11c":null,"YCL017C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aminotransferase class-V","id":"PF00266","interpro_description":"Aminotransferase class V domain","interpro_id":"IPR000192","interpro_name":"Aminotrans_V_dom","locations":[{"end":434,"start":73}],"match_end":434,"match_start":73,"name":"Aminotran_5"},{"dbname":"PROSITE_PATTERNS","description":"Aminotransferases class-V pyridoxal-phosphate attachment site.","id":"PS00595","interpro_description":"Aminotransferase class-V, pyridoxal-phosphate binding site","interpro_id":"IPR020578","interpro_name":"Aminotrans_V_PyrdxlP_BS","locations":[{"end":282,"start":263}],"match_end":282,"match_start":263,"name":"AA_TRANSFER_CLASS_5"},{"dbname":"FUNFAM","description":"Cysteine desulfurase IscS","id":"G3DSA:3.40.640.10:FF:000003","locations":[{"end":329,"start":84}],"match_end":329,"match_start":84},{"dbname":"FUNFAM","description":"Cysteine desulfurase IscS","id":"G3DSA:3.90.1150.10:FF:000002","locations":[{"end":434,"start":323}],"match_end":434,"match_start":323},{"dbname":"SUPERFAMILY","id":"SSF53383","interpro_description":"Pyridoxal phosphate-dependent transferase","interpro_id":"IPR015424","interpro_name":"PyrdxlP-dep_Trfase","locations":[{"end":456,"start":72}],"match_end":456,"match_start":72,"name":"PLP-dependent transferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.640.10","interpro_description":"Pyridoxal phosphate-dependent transferase, major domain","interpro_id":"IPR015421","interpro_name":"PyrdxlP-dep_Trfase_major","locations":[{"end":329,"start":84}],"match_end":329,"match_start":84},{"dbname":"GENE3D","id":"G3DSA:3.90.1150.10","interpro_description":"Pyridoxal phosphate-dependent transferase, small domain","interpro_id":"IPR015422","interpro_name":"PyrdxlP-dep_Trfase_small","locations":[{"end":83,"start":73},{"end":434,"start":330}],"match_end":434,"match_start":73,"name":"Aspartate Aminotransferase, domain 1"},{"dbname":"PANTHER","id":"PTHR11601","locations":[{"end":449,"start":66}],"match_end":449,"match_start":66,"name":"CYSTEINE DESULFURYLASE FAMILY MEMBER"},{"dbname":"HAMAP","description":"Cysteine desulfurase IscS [iscS].","id":"MF_00331","interpro_description":"Cysteine desulfurase IscS","interpro_id":"IPR010240","interpro_name":"Cys_deSase_IscS","locations":[{"end":461,"start":69}],"match_end":461,"match_start":69,"name":"Cys_desulf_IscS"},{"dbname":"NCBIFAM","description":"IscS subfamily cysteine desulfurase","id":"NF010611","locations":[{"end":470,"start":70}],"match_end":470,"match_start":70,"name":"PRK14012.1"},{"dbname":"NCBIFAM","description":"IscS subfamily cysteine desulfurase","id":"TIGR02006","interpro_description":"Cysteine desulfurase IscS","interpro_id":"IPR010240","interpro_name":"Cys_deSase_IscS","locations":[{"end":470,"start":71}],"match_end":470,"match_start":71,"name":"IscS"},{"dbname":"NCBIFAM","description":"IscS subfamily cysteine desulfurase","id":"NF002806","locations":[{"end":441,"start":73}],"match_end":441,"match_start":73,"name":"PRK02948.1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3872328,"start_pos":3870916,"strand":"reverse"},"name":"nfs1","ortholog_annotations":[{"gene_uniquename":"SJAG_00186","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15910","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00186","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21D10.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00186","ortholog_taxonid":4932,"ortholog_uniquename":"YCL017C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial [2Fe-2S] cluster assembly and tRNA modification cysteine desulfurase Nfs1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051536","GO:0030170"],"not-binding":["GO:0031071"]}},"subset_termids":["MONDO:0005066","GO:0005739","GO:0006399","GO:0016226","GO:0005829","GO:0016782","GO:0005634","MONDO:0004069"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002143":null,"GO:0005634":null,"GO:0005759":null,"GO:0030170":null,"GO:0031071":null,"GO:0044571":null,"GO:0051536":null,"GO:0099128":null,"MONDO:0030311":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00186.1"],"transcripts_by_uniquename":{"SJAG_00186.1":null},"uniprot_identifier":"B6JXP5","uniquename":"SJAG_00186"}


id: SJAG_00187
data:
  {"coiled_coil_coords":[{"range":{"end":63,"start":43}}],"cv_annotations":{"biological_process":[{"annotations":[107202],"is_not":false,"summary":null,"term":"GO:0140861"}],"cellular_component":[{"annotations":[107200],"is_not":false,"summary":null,"term":"GO:0035267"},{"annotations":[107201],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["InterPro:IPR036427","GOA:B6JXP6","EnsemblGenomes-Tr:EEB05190","InterPro:IPR001487","EnsemblGenomes-Gn:SJAG_00187","UniProtKB/TrEMBL:B6JXP6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mug15","uniquename":"SJAG_00191"},{"uniquename":"SJAG_00190"},{"name":"cmc2","uniquename":"SJAG_05398"},{"uniquename":"SJAG_00189"},{"name":"rkr1","uniquename":"SJAG_00188"},{"name":"bdc1","uniquename":"SJAG_00187"},{"name":"nfs1","uniquename":"SJAG_00186"},{"name":"hob1","uniquename":"SJAG_00185"},{"name":"sgf29","uniquename":"SJAG_00184"},{"name":"pvg3","uniquename":"SJAG_00183"},{"uniquename":"SJAG_00182"}],"genes_by_uniquename":{"HGNC:19874":null,"SJAG_00187":null,"SPBC21D10.10":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Bromodomain","id":"PF00439","interpro_description":"Bromodomain","interpro_id":"IPR001487","interpro_name":"Bromodomain","locations":[{"end":211,"start":135}],"match_end":211,"match_start":135,"name":"Bromodomain"},{"dbname":"PROSITE_PROFILES","description":"Bromodomain profile.","id":"PS50014","interpro_description":"Bromodomain","interpro_id":"IPR001487","interpro_name":"Bromodomain","locations":[{"end":212,"start":142}],"match_end":212,"match_start":142,"name":"BROMODOMAIN_2"},{"dbname":"SMART","id":"SM00297","interpro_description":"Bromodomain","interpro_id":"IPR001487","interpro_name":"Bromodomain","locations":[{"end":233,"start":123}],"match_end":233,"match_start":123,"name":"bromo_6"},{"dbname":"PRINTS","description":"Bromodomain signature","id":"PR00503","interpro_description":"Bromodomain","interpro_id":"IPR001487","interpro_name":"Bromodomain","locations":[{"end":175,"start":145},{"end":212,"start":193}],"match_end":212,"match_start":145,"name":"BROMODOMAIN"},{"dbname":"SUPERFAMILY","id":"SSF47370","interpro_description":"Bromodomain-like superfamily","interpro_id":"IPR036427","interpro_name":"Bromodomain-like_sf","locations":[{"end":235,"start":112}],"match_end":235,"match_start":112,"name":"Bromodomain"},{"dbname":"GENE3D","id":"G3DSA:1.20.920.10","interpro_description":"Bromodomain-like superfamily","interpro_id":"IPR036427","interpro_name":"Bromodomain-like_sf","locations":[{"end":238,"start":91}],"match_end":238,"match_start":91},{"dbname":"PANTHER","id":"PTHR15398","locations":[{"end":234,"start":108}],"match_end":234,"match_start":108,"name":"BROMODOMAIN-CONTAINING PROTEIN 8"},{"dbname":"COILS","id":"Coil","locations":[{"end":63,"start":43}],"match_end":63,"match_start":43,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3870594,"start_pos":3869878,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":140,"start":117}}],"name":"bdc1","ortholog_annotations":[{"gene_uniquename":"SJAG_00187","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19874","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00187","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21D10.10","reference_uniquename":"PMID:21511999"}],"product":"bromodomain protein Bdc1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005694","GO:0006325","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0035267":null,"GO:0140861":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00187.1"],"transcripts_by_uniquename":{"SJAG_00187.1":null},"uniprot_identifier":"B6JXP6","uniquename":"SJAG_00187"}


id: SJAG_00188
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76941],"is_not":false,"summary":null,"term":"GO:0072344"},{"annotations":[76939],"is_not":false,"summary":null,"term":"GO:1990116"}],"cellular_component":[{"annotations":[76938],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76940],"is_not":false,"summary":null,"term":"GO:1990112"}],"molecular_function":[{"annotations":[76937],"is_not":false,"summary":null,"term":"GO:0043023"},{"annotations":[76942],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[65301],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR011016","InterPro:IPR039795","InterPro:IPR013083","InterPro:IPR016024","EnsemblGenomes-Gn:SJAG_00188","UniProtKB/TrEMBL:B6JXP7","GOA:B6JXP7","InterPro:IPR001841","EnsemblGenomes-Tr:EEB05191","InterPro:IPR039804"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pof1","uniquename":"SJAG_00192"},{"name":"mug15","uniquename":"SJAG_00191"},{"uniquename":"SJAG_00190"},{"name":"cmc2","uniquename":"SJAG_05398"},{"uniquename":"SJAG_00189"},{"name":"rkr1","uniquename":"SJAG_00188"},{"name":"bdc1","uniquename":"SJAG_00187"},{"name":"nfs1","uniquename":"SJAG_00186"},{"name":"hob1","uniquename":"SJAG_00185"},{"name":"sgf29","uniquename":"SJAG_00184"},{"name":"pvg3","uniquename":"SJAG_00183"}],"genes_by_uniquename":{"HGNC:13082":null,"SJAG_00188":null,"SPBC21D10.09c":null,"YMR247C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"LTN1 family HEAT repeat region","id":"PF22999","interpro_description":"E3 ubiquitin-protein ligase listerin, HEAT repeat region","interpro_id":"IPR054477","interpro_name":"LTN1_E3_ligase_6th","locations":[{"end":1432,"start":1217}],"match_end":1432,"match_start":1217,"name":"LTN1_E3_ligase_6th"},{"dbname":"PFAM","description":"E3 ubiquitin-protein ligase listerin, N-terminal domain","id":"PF22958","interpro_description":"E3 ubiquitin-protein ligase listerin, N-terminal domain","interpro_id":"IPR054476","interpro_name":"Ltn1_N","locations":[{"end":265,"start":32}],"match_end":265,"match_start":32,"name":"Ltn1_1st"},{"dbname":"PFAM","description":"Ubiquitin conjugating domain-like","id":"PF23009","interpro_description":"E3 ubiquitin-protein ligase listerin, ubiquitin conjugating domain","interpro_id":"IPR054478","interpro_name":"LTN1_UBC","locations":[{"end":1529,"start":1448}],"match_end":1529,"match_start":1448,"name":"UBC_like"},{"dbname":"PFAM","description":"Ring finger domain","id":"PF13639","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":1584,"start":1537}],"match_end":1584,"match_start":1537,"name":"zf-RING_2"},{"dbname":"CDD","description":"RING-CH-C4HC3_LTN1","id":"cd16491","interpro_description":"Listerin, zinc finger, RING-type","interpro_id":"IPR039804","interpro_name":"RING-CH-C4HC3_LTN1","locations":[{"end":1584,"start":1536}],"match_end":1584,"match_start":1536,"name":"RING-CH-C4HC3_LTN1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger RING-type profile.","id":"PS50089","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":1584,"start":1538}],"match_end":1584,"match_start":1538,"name":"ZF_RING_2"},{"dbname":"SMART","id":"SM00184","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":1583,"start":1538}],"match_end":1583,"match_start":1538,"name":"ring_2"},{"dbname":"SMART","id":"SM00744","interpro_description":"Zinc finger, RING-CH-type","interpro_id":"IPR011016","interpro_name":"Znf_RING-CH","locations":[{"end":1584,"start":1537}],"match_end":1584,"match_start":1537,"name":"ringv_2"},{"dbname":"SMART","id":"SM01197","locations":[{"end":1590,"start":1534}],"match_end":1590,"match_start":1534,"name":"FANCL_C_2"},{"dbname":"FUNFAM","description":"E3 ubiquitin-protein ligase listerin","id":"G3DSA:3.30.40.10:FF:000038","locations":[{"end":1587,"start":1521}],"match_end":1587,"match_start":1521},{"dbname":"SUPERFAMILY","id":"SSF57850","locations":[{"end":1589,"start":1537}],"match_end":1589,"match_start":1537,"name":"RING/U-box"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":302,"start":61},{"end":714,"start":439}],"match_end":714,"match_start":61,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":270,"start":53}],"match_end":270,"match_start":53},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":1590,"start":1522}],"match_end":1590,"match_start":1522,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PANTHER","id":"PTHR12389","interpro_description":"E3 ubiquitin-protein ligase listerin","interpro_id":"IPR039795","interpro_name":"LTN1/Rkr1","locations":[{"end":1587,"start":1069}],"match_end":1587,"match_start":1069,"name":"ZINC FINGER PROTEIN 294"}],"location":{"chromosome_name":"supercont5.1","end_pos":3869506,"start_pos":3864694,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":23,"start":1}},{"range":{"end":245,"start":234}},{"range":{"end":967,"start":955}},{"range":{"end":1271,"start":1262}},{"range":{"end":1348,"start":1334}}],"name":"rkr1","ortholog_annotations":[{"gene_uniquename":"SJAG_00188","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13082","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00188","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21D10.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00188","ortholog_taxonid":4932,"ortholog_uniquename":"YMR247C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00188","ortholog_taxonid":4932,"ortholog_uniquename":"YMR247C","reference_uniquename":"PMID:26896847"}],"product":"RQC complex ubiquitin-protein ligase E3 Rkr1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270","GO:0043023"],"not-binding":["GO:0061630"]}},"subset_termids":["GO:0019787","GO:0140096","GO:0005829","GO:0016746","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0008270":null,"GO:0043023":null,"GO:0061630":null,"GO:0072344":null,"GO:1990112":null,"GO:1990116":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00188.1"],"transcripts_by_uniquename":{"SJAG_00188.1":null},"uniprot_identifier":"B6JXP7","uniquename":"SJAG_00188"}


id: SJAG_00189
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[107191],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107192],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00189","EnsemblGenomes-Tr:EEB05192","UniProtKB/TrEMBL:B6JXP8"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps55","uniquename":"SJAG_07012"},{"name":"pof1","uniquename":"SJAG_00192"},{"name":"mug15","uniquename":"SJAG_00191"},{"uniquename":"SJAG_00190"},{"name":"cmc2","uniquename":"SJAG_05398"},{"uniquename":"SJAG_00189"},{"name":"rkr1","uniquename":"SJAG_00188"},{"name":"bdc1","uniquename":"SJAG_00187"},{"name":"nfs1","uniquename":"SJAG_00186"},{"name":"hob1","uniquename":"SJAG_00185"},{"name":"sgf29","uniquename":"SJAG_00184"}],"genes_by_uniquename":{"SJAG_00189":null,"SPBC21D10.08c":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.1","end_pos":3864259,"start_pos":3863390,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00189","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21D10.08c","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00189.1"],"transcripts_by_uniquename":{"SJAG_00189.1":null},"uniprot_identifier":"B6JXP8","uniquename":"SJAG_00189"}


id: SJAG_00190
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[98784],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98785],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[98786],"is_not":false,"summary":null,"term":"GO:0003824"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05193","EnsemblGenomes-Gn:SJAG_00190","GOA:B6JXP9","UniProtKB/TrEMBL:B6JXP9","InterPro:IPR003848"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mia40","uniquename":"SJAG_00196"},{"name":"sla1","uniquename":"SJAG_00195"},{"name":"vps55","uniquename":"SJAG_07012"},{"name":"pof1","uniquename":"SJAG_00192"},{"name":"mug15","uniquename":"SJAG_00191"},{"uniquename":"SJAG_00190"},{"name":"cmc2","uniquename":"SJAG_05398"},{"uniquename":"SJAG_00189"},{"name":"rkr1","uniquename":"SJAG_00188"},{"name":"bdc1","uniquename":"SJAG_00187"},{"name":"nfs1","uniquename":"SJAG_00186"}],"genes_by_uniquename":{"SJAG_00190":null,"SPAC57A10.07":null,"YOR238W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DUF218 domain","id":"PF02698","interpro_description":"Domain of unknown function DUF218","interpro_id":"IPR003848","interpro_name":"DUF218","locations":[{"end":224,"start":81}],"match_end":224,"match_start":81,"name":"DUF218"},{"dbname":"PANTHER","id":"PTHR28110","interpro_description":"Uncharacterized protein C57A10.07/YOR238W","interpro_id":"IPR055323","interpro_name":"C57A10.07/YOR238W","locations":[{"end":310,"start":34}],"match_end":310,"match_start":34,"name":"TRANSMEMBRANE PROTEIN"}],"location":{"chromosome_name":"supercont5.1","end_pos":3861191,"start_pos":3860253,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00190","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC57A10.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00190","ortholog_taxonid":4932,"ortholog_uniquename":"YOR238W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00190","ortholog_taxonid":4932,"ortholog_uniquename":"YOR238W","reference_uniquename":"PMID:26896847"}],"product":"conserved membrane protein with Rossmann-like alpha/beta/alpha sandwich fold, conserved in fungi and protozoa","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003824"]}},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003824":null,"GO:0005634":null,"GO:0005829":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":55,"start":33}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00190.1"],"transcripts_by_uniquename":{"SJAG_00190.1":null},"uniprot_identifier":"B6JXP9","uniquename":"SJAG_00190"}


id: SJAG_00191
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[98781],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98782],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05194","EnsemblGenomes-Gn:SJAG_00191","UniProtKB/TrEMBL:B6JXQ0"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ura3","uniquename":"SJAG_00197"},{"name":"mia40","uniquename":"SJAG_00196"},{"name":"sla1","uniquename":"SJAG_00195"},{"name":"vps55","uniquename":"SJAG_07012"},{"name":"pof1","uniquename":"SJAG_00192"},{"name":"mug15","uniquename":"SJAG_00191"},{"uniquename":"SJAG_00190"},{"name":"cmc2","uniquename":"SJAG_05398"},{"uniquename":"SJAG_00189"},{"name":"rkr1","uniquename":"SJAG_00188"},{"name":"bdc1","uniquename":"SJAG_00187"}],"genes_by_uniquename":{"SJAG_00191":null,"SPAC57A10.06":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.1","end_pos":3859976,"start_pos":3859525,"strand":"forward"},"name":"mug15","ortholog_annotations":[{"gene_uniquename":"SJAG_00191","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC57A10.06"}],"product":"Roadblock/LC7 domain superfamily protein Mug15","references_by_uniquename":{"GO_REF:0000107":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00191.1"],"transcripts_by_uniquename":{"SJAG_00191.1":null},"uniprot_identifier":"B6JXQ0","uniquename":"SJAG_00191"}


id: SJAG_00192
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98775],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[98776],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[98777],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[98778],"is_not":false,"summary":null,"term":"GO:0006890"},{"annotations":[98779],"is_not":false,"summary":null,"term":"GO:0031146"}],"cellular_component":[{"annotations":[98772],"is_not":false,"summary":null,"term":"GO:0030126"},{"annotations":[98773],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[98774],"is_not":false,"summary":null,"term":"GO:0019005"}],"molecular_function":[{"annotations":[98780],"is_not":false,"summary":null,"term":"GO:1990756"}],"mondo":[{"annotations":[86198],"is_not":false,"summary":null,"term":"MONDO:0859280"}]},"dbxrefs":["InterPro:IPR036322","UniProtKB/TrEMBL:B6JXQ1","InterPro:IPR001810","InterPro:IPR001680","GOA:B6JXQ1","InterPro:IPR036047","InterPro:IPR017986","InterPro:IPR015943","EnsemblGenomes-Tr:EEB05195","InterPro:IPR019775","InterPro:IPR020472","EnsemblGenomes-Gn:SJAG_00192"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":227,"start":205}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cdc17","uniquename":"SJAG_00198"},{"name":"ura3","uniquename":"SJAG_00197"},{"name":"mia40","uniquename":"SJAG_00196"},{"name":"sla1","uniquename":"SJAG_00195"},{"name":"vps55","uniquename":"SJAG_07012"},{"name":"pof1","uniquename":"SJAG_00192"},{"name":"mug15","uniquename":"SJAG_00191"},{"uniquename":"SJAG_00190"},{"name":"cmc2","uniquename":"SJAG_05398"},{"uniquename":"SJAG_00189"},{"name":"rkr1","uniquename":"SJAG_00188"}],"genes_by_uniquename":{"HGNC:13595":null,"HGNC:13608":null,"HGNC:16712":null,"SJAG_00192":null,"SPAC57A10.05c":null,"YIL046W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":309,"start":279},{"end":349,"start":314},{"end":388,"start":353},{"end":430,"start":396},{"end":470,"start":435},{"end":509,"start":475},{"end":547,"start":513}],"match_end":547,"match_start":279,"name":"WD40"},{"dbname":"PFAM","description":"F-box-like","id":"PF12937","interpro_description":"F-box domain","interpro_id":"IPR001810","interpro_name":"F-box_dom","locations":[{"end":161,"start":116}],"match_end":161,"match_start":116,"name":"F-box-like"},{"dbname":"CDD","description":"F-box_SpPof1-like","id":"cd22147","locations":[{"end":160,"start":115}],"match_end":160,"match_start":115,"name":"F-box_SpPof1-like"},{"dbname":"CDD","description":"WD40","id":"cd00200","locations":[{"end":547,"start":279}],"match_end":547,"match_start":279,"name":"WD40"},{"dbname":"PROSITE_PATTERNS","description":"Trp-Asp (WD) repeats signature.","id":"PS00678","interpro_description":"WD40 repeat, conserved site","interpro_id":"IPR019775","interpro_name":"WD40_repeat_CS","locations":[{"end":310,"start":296}],"match_end":310,"match_start":296,"name":"WD_REPEATS_1"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":312,"start":279},{"end":353,"start":319},{"end":388,"start":359},{"end":433,"start":398},{"end":472,"start":440}],"match_end":472,"match_start":279,"name":"WD_REPEATS_REGION"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":388,"start":279},{"end":479,"start":398}],"match_end":479,"match_start":279,"name":"WD_REPEATS_2"},{"dbname":"PROSITE_PROFILES","description":"F-box domain profile.","id":"PS50181","interpro_description":"F-box domain","interpro_id":"IPR001810","interpro_name":"F-box_dom","locations":[{"end":159,"start":113}],"match_end":159,"match_start":113,"name":"FBOX"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":309,"start":272},{"end":349,"start":312},{"end":389,"start":352},{"end":430,"start":391},{"end":470,"start":433},{"end":548,"start":473}],"match_end":548,"match_start":272,"name":"WD40_4"},{"dbname":"SMART","id":"SM00256","interpro_description":"F-box domain","interpro_id":"IPR001810","interpro_name":"F-box_dom","locations":[{"end":159,"start":119}],"match_end":159,"match_start":119,"name":"fbox_2"},{"dbname":"PRINTS","description":"G protein beta WD-40 repeat signature","id":"PR00320","interpro_description":"G-protein beta WD-40 repeat","interpro_id":"IPR020472","interpro_name":"G-protein_beta_WD-40_rep","locations":[{"end":310,"start":296},{"end":350,"start":336},{"end":511,"start":497}],"match_end":511,"match_start":296,"name":"GPROTEINBRPT"},{"dbname":"FUNFAM","description":"F-box protein MET30","id":"G3DSA:2.130.10.10:FF:000715","locations":[{"end":393,"start":269}],"match_end":393,"match_start":269},{"dbname":"FUNFAM","description":"E3 ubiquitin ligase complex SCF subunit sconB","id":"G3DSA:1.20.1280.50:FF:000016","locations":[{"end":187,"start":98}],"match_end":187,"match_start":98},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":547,"start":276}],"match_end":547,"match_start":276,"name":"WD40 repeat-like"},{"dbname":"SUPERFAMILY","id":"SSF81383","interpro_description":"F-box-like domain superfamily","interpro_id":"IPR036047","interpro_name":"F-box-like_dom_sf","locations":[{"end":182,"start":105},{"end":267,"start":252}],"match_end":267,"match_start":105,"name":"F-box domain"},{"dbname":"GENE3D","id":"G3DSA:1.20.1280.50","locations":[{"end":164,"start":99},{"end":269,"start":252}],"match_end":269,"match_start":99},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":562,"start":270}],"match_end":562,"match_start":270},{"dbname":"PANTHER","id":"PTHR19872","interpro_description":"SCF complex subunit WD repeat-containing protein","interpro_id":"IPR051075","interpro_name":"SCF_subunit_WD-repeat","locations":[{"end":560,"start":5}],"match_end":560,"match_start":5,"name":"UBIQUITIN LIGASE SPECIFICITY FACTOR/HREP PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":227,"start":205}],"match_end":227,"match_start":205,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3858340,"start_pos":3856637,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":109,"start":94}},{"range":{"end":559,"start":551}}],"name":"pof1","ortholog_annotations":[{"gene_uniquename":"SJAG_00192","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13595","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00192","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13608","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00192","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16712","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00192","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC57A10.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00192","ortholog_taxonid":4932,"ortholog_uniquename":"YIL046W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00192","ortholog_taxonid":4932,"ortholog_uniquename":"YIL046W","reference_uniquename":"PMID:26896847"}],"product":"F-box/WD repeat protein, probable hydrogen sulfide sensing ubiquitin ligase adaptor Pof1","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:1990756"]}},"subset_termids":["GO:0030163","GO:0016192","GO:0060090","GO:0031410","GO:0005794","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0006886":null,"GO:0006888":null,"GO:0006890":null,"GO:0006891":null,"GO:0019005":null,"GO:0030126":null,"GO:0031146":null,"GO:1990756":null,"MONDO:0859280":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00192.1"],"transcripts_by_uniquename":{"SJAG_00192.1":null},"uniprot_identifier":"B6JXQ1","uniquename":"SJAG_00192"}


id: SJAG_00195
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98800],"is_not":false,"summary":null,"term":"GO:0042780"},{"annotations":[98801],"is_not":false,"summary":null,"term":"GO:0001682"},{"annotations":[98802],"is_not":false,"summary":null,"term":"GO:0061818"}],"cellular_component":[{"annotations":[98796],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[75740],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[75741],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[98806],"is_not":false,"summary":null,"term":"GO:0140691"},{"annotations":[98808],"is_not":false,"summary":null,"term":"GO:0000049"}]},"dbxrefs":["InterPro:IPR012677","EnsemblGenomes-Tr:EEB05197","InterPro:IPR036388","UniProtKB/TrEMBL:B6JXQ3","InterPro:IPR035979","InterPro:IPR036390","EnsemblGenomes-Gn:SJAG_00195","GOA:B6JXQ3","InterPro:IPR002344","InterPro:IPR006630","InterPro:IPR000504"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":53,"start":1}},{"range":{"end":287,"start":261}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05182"},{"uniquename":"SJAG_00199"},{"name":"cdc17","uniquename":"SJAG_00198"},{"name":"ura3","uniquename":"SJAG_00197"},{"name":"mia40","uniquename":"SJAG_00196"},{"name":"sla1","uniquename":"SJAG_00195"},{"name":"vps55","uniquename":"SJAG_07012"},{"name":"pof1","uniquename":"SJAG_00192"},{"name":"mug15","uniquename":"SJAG_00191"},{"uniquename":"SJAG_00190"},{"name":"cmc2","uniquename":"SJAG_05398"}],"genes_by_uniquename":{"HGNC:11316":null,"SJAG_00195":null,"SPAC57A10.10c":null,"YDL051W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"La domain","id":"PF05383","interpro_description":"La-type HTH domain","interpro_id":"IPR006630","interpro_name":"La_HTH","locations":[{"end":115,"start":59}],"match_end":115,"match_start":59,"name":"La"},{"dbname":"CDD","description":"LA_like_fungal","id":"cd08029","locations":[{"end":131,"start":56}],"match_end":131,"match_start":56,"name":"LA_like_fungal"},{"dbname":"CDD","description":"RRM1_La","id":"cd12291","locations":[{"end":227,"start":150}],"match_end":227,"match_start":150,"name":"RRM1_La"},{"dbname":"PROSITE_PROFILES","description":"La-type HTH domain profile.","id":"PS50961","interpro_description":"La-type HTH domain","interpro_id":"IPR006630","interpro_name":"La_HTH","locations":[{"end":140,"start":49}],"match_end":140,"match_start":49,"name":"HTH_LA"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":238,"start":149}],"match_end":238,"match_start":149,"name":"RRM"},{"dbname":"SMART","id":"SM00715","interpro_description":"La-type HTH domain","interpro_id":"IPR006630","interpro_name":"La_HTH","locations":[{"end":132,"start":53}],"match_end":132,"match_start":53,"name":"la"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":227,"start":150}],"match_end":227,"match_start":150,"name":"rrm1_1"},{"dbname":"PRINTS","description":"Lupus La protein signature","id":"PR00302","interpro_description":"Lupus La protein","interpro_id":"IPR002344","interpro_name":"Lupus_La","locations":[{"end":79,"start":62},{"end":102,"start":87},{"end":131,"start":118},{"end":159,"start":143},{"end":209,"start":191}],"match_end":209,"match_start":62,"name":"LUPUSLA"},{"dbname":"SUPERFAMILY","id":"SSF46785","interpro_description":"Winged helix DNA-binding domain superfamily","interpro_id":"IPR036390","interpro_name":"WH_DNA-bd_sf","locations":[{"end":138,"start":51}],"match_end":138,"match_start":51,"name":"\"Winged helix\" DNA-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":230,"start":145}],"match_end":230,"match_start":145,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":238,"start":145}],"match_end":238,"match_start":145},{"dbname":"GENE3D","id":"G3DSA:1.10.10.10","interpro_description":"Winged helix-like DNA-binding domain superfamily","interpro_id":"IPR036388","interpro_name":"WH-like_DNA-bd_sf","locations":[{"end":136,"start":43}],"match_end":136,"match_start":43},{"dbname":"PANTHER","id":"PTHR22792","interpro_description":"La domain containing protein","interpro_id":"IPR045180","interpro_name":"La_dom_prot","locations":[{"end":271,"start":12}],"match_end":271,"match_start":12,"name":"LUPUS LA PROTEIN-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":53,"start":1},{"end":287,"start":261}],"match_end":287,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":27,"start":1}],"match_end":27,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":279,"start":267}],"match_end":279,"match_start":267,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3854117,"start_pos":3853254,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":26,"start":3}}],"name":"sla1","ortholog_annotations":[{"gene_uniquename":"SJAG_00195","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11316","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00195","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC57A10.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00195","ortholog_taxonid":4932,"ortholog_uniquename":"YDL051W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00195","ortholog_taxonid":4932,"ortholog_uniquename":"YDL051W","reference_uniquename":"PMID:26896847"}],"product":"tRNA chaperone, La protein, Sla1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000049","GO:0003729"],"not-binding":["GO:0140691"]}},"subset_termids":["GO:0006399","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000049":null,"GO:0001682":null,"GO:0003729":null,"GO:0005634":null,"GO:0005737":null,"GO:0042780":null,"GO:0061818":null,"GO:0140691":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00195.1"],"transcripts_by_uniquename":{"SJAG_00195.1":null},"uniprot_identifier":"B6JXQ3","uniquename":"SJAG_00195"}


id: SJAG_00196
data:
  {"coiled_coil_coords":[{"range":{"end":147,"start":124}}],"cv_annotations":{"biological_process":[{"annotations":[98812],"is_not":false,"summary":null,"term":"GO:0160203"}],"cellular_component":[{"annotations":[67511],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[78611],"is_not":false,"summary":null,"term":"GO:0005758"}],"molecular_function":[{"annotations":[78612],"is_not":false,"summary":null,"term":"GO:0015035"},{"annotations":[98814],"is_not":false,"summary":null,"term":"GO:0016972"}]},"dbxrefs":["InterPro:IPR010625","GOA:B6JXQ4","EnsemblGenomes-Gn:SJAG_00196","UniProtKB/TrEMBL:B6JXQ4","EnsemblGenomes-Tr:EEB05198","InterPro:IPR039289"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":110,"start":77}},{"range":{"end":193,"start":131}},{"range":{"end":347,"start":279}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rrn6","uniquename":"SJAG_00202"},{"uniquename":"SJAG_05182"},{"uniquename":"SJAG_00199"},{"name":"cdc17","uniquename":"SJAG_00198"},{"name":"ura3","uniquename":"SJAG_00197"},{"name":"mia40","uniquename":"SJAG_00196"},{"name":"sla1","uniquename":"SJAG_00195"},{"name":"vps55","uniquename":"SJAG_07012"},{"name":"pof1","uniquename":"SJAG_00192"},{"name":"mug15","uniquename":"SJAG_00191"},{"uniquename":"SJAG_00190"}],"genes_by_uniquename":{"HGNC:26467":null,"SJAG_00196":null,"SPAC57A10.11c":null,"YKL195W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CHCH domain","id":"PF06747","interpro_description":"CHCH","interpro_id":"IPR010625","interpro_name":"CHCH","locations":[{"end":269,"start":234}],"match_end":269,"match_start":234,"name":"CHCH"},{"dbname":"PROSITE_PROFILES","description":"Coiled coil-helix-coiled coil-helix (CHCH) domain profile.","id":"PS51808","locations":[{"end":275,"start":231}],"match_end":275,"match_start":231,"name":"CHCH"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.2900","locations":[{"end":279,"start":201}],"match_end":279,"match_start":201},{"dbname":"PANTHER","id":"PTHR21622","interpro_description":"Mitochondrial intermembrane space import and assembly protein 40","interpro_id":"IPR039289","interpro_name":"CHCHD4","locations":[{"end":311,"start":173}],"match_end":311,"match_start":173,"name":"COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4"},{"dbname":"COILS","id":"Coil","locations":[{"end":147,"start":124}],"match_end":147,"match_start":124,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":110,"start":77},{"end":193,"start":131},{"end":347,"start":279}],"match_end":347,"match_start":77,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":193,"start":181},{"end":347,"start":314}],"match_end":347,"match_start":181,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":89,"start":77},{"end":306,"start":296}],"match_end":306,"match_start":77,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":149,"start":131},{"end":295,"start":286}],"match_end":295,"match_start":131,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3852950,"start_pos":3851818,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":13,"start":2}},{"range":{"end":158,"start":144}},{"range":{"end":194,"start":171}},{"range":{"end":214,"start":198}},{"range":{"end":325,"start":311}},{"range":{"end":344,"start":331}}],"name":"mia40","ortholog_annotations":[{"gene_uniquename":"SJAG_00196","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26467","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00196","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC57A10.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00196","ortholog_taxonid":4932,"ortholog_uniquename":"YKL195W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00196","ortholog_taxonid":4932,"ortholog_uniquename":"YKL195W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial Mia40-Erv1 disulfide relay system thiol oxidase subunit Mia40","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0015035","GO:0016972"]}},"subset_termids":["GO:0006457","GO:0051604","GO:0140096","GO:0006605","GO:0016491","GO:0055085","GO:0015036","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0005758":null,"GO:0015035":null,"GO:0016972":null,"GO:0160203":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00196.1"],"transcripts_by_uniquename":{"SJAG_00196.1":null},"uniprot_identifier":"B6JXQ4","uniquename":"SJAG_00196"}


id: SJAG_00197
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70346],"is_not":false,"summary":null,"term":"GO:0006207"},{"annotations":[57233],"is_not":false,"summary":null,"term":"GO:0044205"}],"cellular_component":[{"annotations":[70343],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[57231],"is_not":false,"summary":null,"term":"GO:0106430"}],"mondo":[{"annotations":[85729],"is_not":false,"summary":null,"term":"MONDO:0009903"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00197","EnsemblGenomes-Tr:EEB05199","InterPro:IPR001295","InterPro:IPR013785","GOA:B6JXQ5","InterPro:IPR005719","InterPro:IPR005720","UniProtKB/TrEMBL:B6JXQ5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"osm1","uniquename":"SJAG_00203"},{"name":"rrn6","uniquename":"SJAG_00202"},{"uniquename":"SJAG_05182"},{"uniquename":"SJAG_00199"},{"name":"cdc17","uniquename":"SJAG_00198"},{"name":"ura3","uniquename":"SJAG_00197"},{"name":"mia40","uniquename":"SJAG_00196"},{"name":"sla1","uniquename":"SJAG_00195"},{"name":"vps55","uniquename":"SJAG_07012"},{"name":"pof1","uniquename":"SJAG_00192"},{"name":"mug15","uniquename":"SJAG_00191"}],"genes_by_uniquename":{"HGNC:2867":null,"SJAG_00197":null,"SPAC57A10.12c":null,"YKL216W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Dihydroorotate dehydrogenase","id":"PF01180","interpro_description":"Dihydroorotate dehydrogenase, catalytic","interpro_id":"IPR005720","interpro_name":"Dihydroorotate_DH_cat","locations":[{"end":428,"start":103}],"match_end":428,"match_start":103,"name":"DHO_dh"},{"dbname":"CDD","description":"DHOD_2_like","id":"cd04738","interpro_description":"Dihydroorotate dehydrogenase, class 2","interpro_id":"IPR005719","interpro_name":"Dihydroorotate_DH_2","locations":[{"end":424,"start":67}],"match_end":424,"match_start":67,"name":"DHOD_2_like"},{"dbname":"PROSITE_PATTERNS","description":"Dihydroorotate dehydrogenase signature 1.","id":"PS00911","interpro_description":"Dihydroorotate dehydrogenase, conserved site","interpro_id":"IPR001295","interpro_name":"Dihydroorotate_DH_CS","locations":[{"end":157,"start":138}],"match_end":157,"match_start":138,"name":"DHODEHASE_1"},{"dbname":"PROSITE_PATTERNS","description":"Dihydroorotate dehydrogenase signature 2.","id":"PS00912","interpro_description":"Dihydroorotate dehydrogenase, conserved site","interpro_id":"IPR001295","interpro_name":"Dihydroorotate_DH_CS","locations":[{"end":400,"start":380}],"match_end":400,"match_start":380,"name":"DHODEHASE_2"},{"dbname":"SUPERFAMILY","id":"SSF51395","locations":[{"end":198,"start":66},{"end":428,"start":226}],"match_end":428,"match_start":66,"name":"FMN-linked oxidoreductases"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.70","interpro_description":"Aldolase-type TIM barrel","interpro_id":"IPR013785","interpro_name":"Aldolase_TIM","locations":[{"end":442,"start":57}],"match_end":442,"match_start":57,"name":"Aldolase class I"},{"dbname":"PANTHER","id":"PTHR48109","interpro_description":"Dihydroorotate dehydrogenase","interpro_id":"IPR050074","interpro_name":"DHO_dehydrogenase","locations":[{"end":439,"start":42}],"match_end":439,"match_start":42,"name":"DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED"},{"dbname":"NCBIFAM","description":"dihydroorotate dehydrogenase (quinone)","id":"TIGR01036","interpro_description":"Dihydroorotate dehydrogenase, class 2","interpro_id":"IPR005719","interpro_name":"Dihydroorotate_DH_2","locations":[{"end":431,"start":76}],"match_end":431,"match_start":76,"name":"pyrD_sub2"}],"location":{"chromosome_name":"supercont5.1","end_pos":3851112,"start_pos":3849784,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":51,"start":34}}],"name":"ura3","ortholog_annotations":[{"gene_uniquename":"SJAG_00197","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2867","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00197","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC57A10.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00197","ortholog_taxonid":4932,"ortholog_uniquename":"YKL216W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial dihydroorotate dehydrogenase Ura3","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0106430"]}},"subset_termids":["GO:0016491","MONDO:0005497","GO:0055086","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0006207":null,"GO:0044205":null,"GO:0106430":null,"MONDO:0009903":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00197.1"],"transcripts_by_uniquename":{"SJAG_00197.1":null},"uniprot_identifier":"B6JXQ5","uniquename":"SJAG_00197"}


id: SJAG_00198
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92883],"is_not":false,"summary":null,"term":"GO:0006284"},{"annotations":[59902],"is_not":false,"summary":null,"term":"GO:0071897"},{"annotations":[59904],"is_not":false,"summary":null,"term":"GO:0006310"},{"annotations":[92887],"is_not":false,"summary":null,"term":"GO:0032042"},{"annotations":[92888],"is_not":false,"summary":null,"term":"GO:0006289"},{"annotations":[72613],"is_not":false,"summary":null,"term":"GO:1903461"}],"cellular_component":[{"annotations":[72610],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[92881],"is_not":false,"summary":null,"term":"GO:0043596"}],"molecular_function":[{"annotations":[59898],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[59899],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[72611],"is_not":false,"summary":null,"term":"GO:0003910"}],"mondo":[{"annotations":[87460],"is_not":false,"summary":null,"term":"MONDO:0030693"}]},"dbxrefs":["InterPro:IPR012340","InterPro:IPR012308","InterPro:IPR016059","UniProtKB/TrEMBL:B6JXQ6","InterPro:IPR012310","EnsemblGenomes-Tr:EEB05200","InterPro:IPR000977","InterPro:IPR036599","EnsemblGenomes-Gn:SJAG_00198","InterPro:IPR012309","GOA:B6JXQ6"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":107,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps8","uniquename":"SJAG_00204"},{"name":"osm1","uniquename":"SJAG_00203"},{"name":"rrn6","uniquename":"SJAG_00202"},{"uniquename":"SJAG_05182"},{"uniquename":"SJAG_00199"},{"name":"cdc17","uniquename":"SJAG_00198"},{"name":"ura3","uniquename":"SJAG_00197"},{"name":"mia40","uniquename":"SJAG_00196"},{"name":"sla1","uniquename":"SJAG_00195"},{"name":"vps55","uniquename":"SJAG_07012"},{"name":"pof1","uniquename":"SJAG_00192"}],"genes_by_uniquename":{"HGNC:6598":null,"SJAG_00198":null,"SPAC20G8.01":null,"YDL164C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ATP dependent DNA ligase C terminal region","id":"PF04679","interpro_description":"DNA ligase, ATP-dependent, C-terminal","interpro_id":"IPR012309","interpro_name":"DNA_ligase_ATP-dep_C","locations":[{"end":697,"start":585}],"match_end":697,"match_start":585,"name":"DNA_ligase_A_C"},{"dbname":"PFAM","description":"ATP dependent DNA ligase domain","id":"PF01068","interpro_description":"DNA ligase, ATP-dependent, central","interpro_id":"IPR012310","interpro_name":"DNA_ligase_ATP-dep_cent","locations":[{"end":559,"start":354}],"match_end":559,"match_start":354,"name":"DNA_ligase_A_M"},{"dbname":"PFAM","description":"DNA ligase N terminus","id":"PF04675","interpro_description":"DNA ligase, ATP-dependent, N-terminal","interpro_id":"IPR012308","interpro_name":"DNA_ligase_ATP-dep_N","locations":[{"end":288,"start":113}],"match_end":288,"match_start":113,"name":"DNA_ligase_A_N"},{"dbname":"CDD","description":"OBF_DNA_ligase_I","id":"cd07969","locations":[{"end":714,"start":567}],"match_end":714,"match_start":567,"name":"OBF_DNA_ligase_I"},{"dbname":"CDD","description":"Adenylation_DNA_ligase_I_Euk","id":"cd07900","locations":[{"end":562,"start":344}],"match_end":562,"match_start":344,"name":"Adenylation_DNA_ligase_I_Euk"},{"dbname":"PROSITE_PATTERNS","description":"ATP-dependent DNA ligase AMP-binding site.","id":"PS00697","interpro_description":"DNA ligase, ATP-dependent, conserved site","interpro_id":"IPR016059","interpro_name":"DNA_ligase_ATP-dep_CS","locations":[{"end":386,"start":378}],"match_end":386,"match_start":378,"name":"DNA_LIGASE_A1"},{"dbname":"PROSITE_PATTERNS","description":"ATP-dependent DNA ligase signature 2.","id":"PS00333","interpro_description":"DNA ligase, ATP-dependent, conserved site","interpro_id":"IPR016059","interpro_name":"DNA_ligase_ATP-dep_CS","locations":[{"end":559,"start":532}],"match_end":559,"match_start":532,"name":"DNA_LIGASE_A2"},{"dbname":"PROSITE_PROFILES","description":"ATP-dependent DNA ligase family profile.","id":"PS50160","interpro_description":"DNA ligase, ATP-dependent, central","interpro_id":"IPR012310","interpro_name":"DNA_ligase_ATP-dep_cent","locations":[{"end":597,"start":460}],"match_end":597,"match_start":460,"name":"DNA_LIGASE_A3"},{"dbname":"FUNFAM","description":"DNA ligase","id":"G3DSA:3.30.470.30:FF:000016","locations":[{"end":561,"start":354}],"match_end":561,"match_start":354},{"dbname":"FUNFAM","description":"DNA ligase","id":"G3DSA:2.40.50.140:FF:000062","locations":[{"end":725,"start":564}],"match_end":725,"match_start":564},{"dbname":"FUNFAM","description":"DNA ligase","id":"G3DSA:1.10.3260.10:FF:000001","locations":[{"end":356,"start":89}],"match_end":356,"match_start":89},{"dbname":"SUPERFAMILY","id":"SSF117018","interpro_description":"DNA ligase, ATP-dependent, N-terminal domain superfamily","interpro_id":"IPR036599","interpro_name":"DNA_ligase_N_sf","locations":[{"end":345,"start":101}],"match_end":345,"match_start":101,"name":"ATP-dependent DNA ligase DNA-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF50249","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":715,"start":567}],"match_end":715,"match_start":567,"name":"Nucleic acid-binding proteins"},{"dbname":"SUPERFAMILY","id":"SSF56091","locations":[{"end":559,"start":350}],"match_end":559,"match_start":350,"name":"DNA ligase/mRNA capping enzyme, catalytic domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.470.30","locations":[{"end":508,"start":383}],"match_end":508,"match_start":383,"name":"DNA ligase/mRNA capping enzyme"},{"dbname":"GENE3D","id":"G3DSA:2.40.50.140","interpro_description":"Nucleic acid-binding, OB-fold","interpro_id":"IPR012340","interpro_name":"NA-bd_OB-fold","locations":[{"end":725,"start":564}],"match_end":725,"match_start":564},{"dbname":"GENE3D","id":"G3DSA:1.10.3260.10","interpro_description":"DNA ligase, ATP-dependent, N-terminal domain superfamily","interpro_id":"IPR036599","interpro_name":"DNA_ligase_N_sf","locations":[{"end":356,"start":89}],"match_end":356,"match_start":89},{"dbname":"GENE3D","id":"G3DSA:3.30.1490.70","locations":[{"end":382,"start":364},{"end":563,"start":509}],"match_end":563,"match_start":364},{"dbname":"PANTHER","id":"PTHR45674","interpro_description":"ATP-dependent DNA ligase","interpro_id":"IPR050191","interpro_name":"ATP-dep_DNA_ligase","locations":[{"end":719,"start":34}],"match_end":719,"match_start":34,"name":"DNA LIGASE 1/3 FAMILY MEMBER"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":107,"start":1}],"match_end":107,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":12,"start":1},{"end":37,"start":27}],"match_end":37,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":26,"start":17},{"end":53,"start":42},{"end":104,"start":91}],"match_end":104,"match_start":17,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"ATP-dependent DNA ligase","id":"TIGR00574","interpro_description":"DNA ligase, ATP-dependent","interpro_id":"IPR000977","interpro_name":"DNA_ligase_ATP-dep","locations":[{"end":713,"start":170}],"match_end":713,"match_start":170,"name":"dnl1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3848663,"start_pos":3846390,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":86,"start":74}},{"range":{"end":340,"start":330}}],"name":"cdc17","ortholog_annotations":[{"gene_uniquename":"SJAG_00198","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6598","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00198","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC20G8.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00198","ortholog_taxonid":4932,"ortholog_uniquename":"YDL164C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00198","ortholog_taxonid":4932,"ortholog_uniquename":"YDL164C","reference_uniquename":"PMID:26896847"}],"product":"ATP-dependent DNA replication ligase Cdc17","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0003677"],"not-binding":["GO:0003910"]}},"subset_termids":["GO:0006260","MONDO:0005046","GO:0016874","GO:0006310","GO:0006281","GO:0005634","GO:0007005","GO:0005694","GO:0005739","GO:0140097"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003677":null,"GO:0003910":null,"GO:0005524":null,"GO:0005739":null,"GO:0006284":null,"GO:0006289":null,"GO:0006310":null,"GO:0032042":null,"GO:0043596":null,"GO:0071897":null,"GO:1903461":null,"MONDO:0030693":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00198.1"],"transcripts_by_uniquename":{"SJAG_00198.1":null},"uniprot_identifier":"B6JXQ6","uniquename":"SJAG_00198"}


id: SJAG_00199
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92895],"is_not":false,"summary":null,"term":"GO:0016042"}],"cellular_component":[{"annotations":[92894],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[64246],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[76085],"is_not":false,"summary":null,"term":"GO:0004620"}],"mondo":[{"annotations":[85508],"is_not":false,"summary":null,"term":"MONDO:0012256"},{"annotations":[85611],"is_not":false,"summary":null,"term":"MONDO:0014018"}]},"dbxrefs":["InterPro:IPR029058","GOA:B6JXQ7","EnsemblGenomes-Tr:EEB05201","EnsemblGenomes-Gn:SJAG_00199","InterPro:IPR004177","UniProtKB/TrEMBL:B6JXQ7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":625,"start":606}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00205"},{"name":"vps8","uniquename":"SJAG_00204"},{"name":"osm1","uniquename":"SJAG_00203"},{"name":"rrn6","uniquename":"SJAG_00202"},{"uniquename":"SJAG_05182"},{"uniquename":"SJAG_00199"},{"name":"cdc17","uniquename":"SJAG_00198"},{"name":"ura3","uniquename":"SJAG_00197"},{"name":"mia40","uniquename":"SJAG_00196"},{"name":"sla1","uniquename":"SJAG_00195"},{"name":"vps55","uniquename":"SJAG_07012"}],"genes_by_uniquename":{"HGNC:17018":null,"HGNC:19714":null,"HGNC:29106":null,"SJAG_00199":null,"SPAC20G8.02":null,"YOR022C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WWE domain","id":"PF23463","locations":[{"end":119,"start":35}],"match_end":119,"match_start":35,"name":"WWE_2"},{"dbname":"PFAM","description":"DDHD domain","id":"PF02862","interpro_description":"DDHD domain","interpro_id":"IPR004177","interpro_name":"DDHD_dom","locations":[{"end":679,"start":471}],"match_end":679,"match_start":471,"name":"DDHD"},{"dbname":"PROSITE_PROFILES","description":"DDHD domain profile.","id":"PS51043","interpro_description":"DDHD domain","interpro_id":"IPR004177","interpro_name":"DDHD_dom","locations":[{"end":680,"start":471}],"match_end":680,"match_start":471,"name":"DDHD"},{"dbname":"SMART","id":"SM01127","interpro_description":"DDHD domain","interpro_id":"IPR004177","interpro_name":"DDHD_dom","locations":[{"end":680,"start":471}],"match_end":680,"match_start":471,"name":"DDHD_2a"},{"dbname":"SUPERFAMILY","id":"SSF53474","interpro_description":"Alpha/Beta hydrolase fold","interpro_id":"IPR029058","interpro_name":"AB_hydrolase_fold","locations":[{"end":496,"start":392},{"end":538,"start":523}],"match_end":538,"match_start":392,"name":"alpha/beta-Hydrolases"},{"dbname":"PANTHER","id":"PTHR23509","locations":[{"end":679,"start":27}],"match_end":679,"match_start":27,"name":"PA-PL1 PHOSPHOLIPASE FAMILY"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":625,"start":606}],"match_end":625,"match_start":606,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":624,"start":606}],"match_end":624,"match_start":606,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3846134,"start_pos":3844092,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":202,"start":192}},{"range":{"end":234,"start":222}},{"range":{"end":657,"start":646}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00199","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17018","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00199","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19714","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00199","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29106","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00199","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC20G8.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00199","ortholog_taxonid":4932,"ortholog_uniquename":"YOR022C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00199","ortholog_taxonid":4932,"ortholog_uniquename":"YOR022C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial DDHD family phospholipase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0046872"],"not-binding":["GO:0004620"]}},"subset_termids":["GO:0005739","GO:0006629","MONDO:0005559","GO:0016788"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004620":null,"GO:0005739":null,"GO:0016042":null,"GO:0046872":null,"MONDO:0012256":null,"MONDO:0014018":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00199.1"],"transcripts_by_uniquename":{"SJAG_00199.1":null},"uniprot_identifier":"B6JXQ7","uniquename":"SJAG_00199"}


id: SJAG_00202
data:
  {"cv_annotations":{"biological_process":[{"annotations":[80191],"is_not":false,"summary":null,"term":"GO:0042790"},{"annotations":[110062],"is_not":false,"summary":null,"term":"GO:0006361"}],"cellular_component":[{"annotations":[110058],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[80194],"is_not":false,"summary":null,"term":"GO:0070860"}],"molecular_function":[{"annotations":[110063],"is_not":false,"summary":null,"term":"GO:0001181"},{"annotations":[80193],"is_not":false,"summary":null,"term":"GO:0001179"},{"annotations":[80192],"is_not":false,"summary":null,"term":"GO:0001163"}]},"dbxrefs":["InterPro:IPR019350","EnsemblGenomes-Tr:EEB05203","EnsemblGenomes-Gn:SJAG_00202","UniProtKB/TrEMBL:B6JXQ9"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":868,"start":813}},{"range":{"end":896,"start":877}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"csm1","uniquename":"SJAG_00207"},{"name":"ntr2","uniquename":"SJAG_00206"},{"uniquename":"SJAG_00205"},{"name":"vps8","uniquename":"SJAG_00204"},{"name":"osm1","uniquename":"SJAG_00203"},{"name":"rrn6","uniquename":"SJAG_00202"},{"uniquename":"SJAG_05182"},{"uniquename":"SJAG_00199"},{"name":"cdc17","uniquename":"SJAG_00198"},{"name":"ura3","uniquename":"SJAG_00197"},{"name":"mia40","uniquename":"SJAG_00196"}],"genes_by_uniquename":{"HGNC:11534":null,"SJAG_00202":null,"SPBC3B8.11":null,"YBL014C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RRN6, K-rich C-terminal domain","id":"PF20639","interpro_description":"RRN6, K-rich C-terminal domain","interpro_id":"IPR048536","interpro_name":"Rrn6_K-rich","locations":[{"end":896,"start":832}],"match_end":896,"match_start":832,"name":"Rrn6_K-rich"},{"dbname":"PFAM","description":"Rrn6, beta-propeller","id":"PF10214","interpro_description":"RRN6, beta-propeller","interpro_id":"IPR048535","interpro_name":"RRN6_beta-prop","locations":[{"end":476,"start":129}],"match_end":476,"match_start":129,"name":"Rrn6_beta-prop"},{"dbname":"PANTHER","id":"PTHR28221","interpro_description":"RNA polymerase I-specific transcription initiation factor RRN6-like","interpro_id":"IPR019350","interpro_name":"RNA_pol_I-sp_TIF_RRN6-like","locations":[{"end":617,"start":1}],"match_end":617,"match_start":1,"name":"RNA POLYMERASE I-SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN6"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":868,"start":813},{"end":896,"start":877}],"match_end":896,"match_start":813,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":868,"start":853}],"match_end":868,"match_start":853,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":896,"start":884}],"match_end":896,"match_start":884,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3838401,"start_pos":3835711,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":97,"start":75}},{"range":{"end":818,"start":804}},{"range":{"end":869,"start":848}},{"range":{"end":890,"start":886}}],"name":"rrn6","ortholog_annotations":[{"gene_uniquename":"SJAG_00202","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11534","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00202","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC3B8.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00202","ortholog_taxonid":4932,"ortholog_uniquename":"YBL014C","reference_uniquename":"PMID:29761456"}],"product":"RNA polymerase I general transcription initiation factor subunit Rrn6","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0001163","GO:0001179"],"not-binding":["GO:0001181"]}},"subset_termids":["GO:0005634","GO:0005829","GO:0140223","GO:0006351","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001163":null,"GO:0001179":null,"GO:0001181":null,"GO:0005829":null,"GO:0006361":null,"GO:0042790":null,"GO:0070860":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00202.1"],"transcripts_by_uniquename":{"SJAG_00202.1":null},"uniprot_identifier":"B6JXQ9","uniquename":"SJAG_00202"}


id: SJAG_00203
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90495],"is_not":false,"summary":null,"term":"GO:0006106"}],"cellular_component":[{"annotations":[90493],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90494],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[60895],"is_not":false,"summary":null,"term":"GO:0010181"},{"annotations":[73418],"is_not":false,"summary":null,"term":"GO:0016156"}]},"dbxrefs":["GOA:B6JXR0","UniProtKB/TrEMBL:B6JXR0","InterPro:IPR027477","EnsemblGenomes-Gn:SJAG_00203","EnsemblGenomes-Tr:EEB05204","InterPro:IPR003953","InterPro:IPR036188","InterPro:IPR010960"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubc13","uniquename":"SJAG_00208"},{"name":"csm1","uniquename":"SJAG_00207"},{"name":"ntr2","uniquename":"SJAG_00206"},{"uniquename":"SJAG_00205"},{"name":"vps8","uniquename":"SJAG_00204"},{"name":"osm1","uniquename":"SJAG_00203"},{"name":"rrn6","uniquename":"SJAG_00202"},{"uniquename":"SJAG_05182"},{"uniquename":"SJAG_00199"},{"name":"cdc17","uniquename":"SJAG_00198"},{"name":"ura3","uniquename":"SJAG_00197"}],"genes_by_uniquename":{"SJAG_00203":null,"SPAC17A2.05":null,"YEL047C":null,"YJR051W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"FAD binding domain","id":"PF00890","interpro_description":"FAD-dependent oxidoreductase 2, FAD-binding domain","interpro_id":"IPR003953","interpro_name":"FAD-dep_OxRdtase_2_FAD-bd","locations":[{"end":559,"start":121}],"match_end":559,"match_start":121,"name":"FAD_binding_2"},{"dbname":"PRINTS","description":"FAD-dependent pyridine nucleotide reductase signature","id":"PR00368","locations":[{"end":140,"start":121},{"end":367,"start":349},{"end":545,"start":523}],"match_end":545,"match_start":121,"name":"FADPNR"},{"dbname":"FUNFAM","description":"NADH-dependent fumarate reductase","id":"G3DSA:3.90.700.10:FF:000007","locations":[{"end":515,"start":363}],"match_end":515,"match_start":363},{"dbname":"SUPERFAMILY","id":"SSF51905","interpro_description":"FAD/NAD(P)-binding domain superfamily","interpro_id":"IPR036188","interpro_name":"FAD/NAD-bd_sf","locations":[{"end":377,"start":106},{"end":575,"start":518}],"match_end":575,"match_start":106,"name":"FAD/NAD(P)-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF56425","interpro_description":"Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily","interpro_id":"IPR027477","interpro_name":"Succ_DH/fumarate_Rdtase_cat_sf","locations":[{"end":519,"start":366}],"match_end":519,"match_start":366,"name":"Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain"},{"dbname":"GENE3D","id":"G3DSA:3.90.700.10","interpro_description":"Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily","interpro_id":"IPR027477","interpro_name":"Succ_DH/fumarate_Rdtase_cat_sf","locations":[{"end":515,"start":363}],"match_end":515,"match_start":363,"name":"Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain"},{"dbname":"GENE3D","id":"G3DSA:3.50.50.60","interpro_description":"FAD/NAD(P)-binding domain superfamily","interpro_id":"IPR036188","interpro_name":"FAD/NAD-bd_sf","locations":[{"end":362,"start":120},{"end":573,"start":518}],"match_end":573,"match_start":120},{"dbname":"PANTHER","id":"PTHR43400","interpro_description":"FAD-dependent oxidoreductase 2","interpro_id":"IPR050315","interpro_name":"FAD-oxidoreductase_2","locations":[{"end":577,"start":113}],"match_end":577,"match_start":113,"name":"FUMARATE REDUCTASE"},{"dbname":"NCBIFAM","description":"flavocytochrome c","id":"TIGR01813","interpro_description":"Flavocytochrome c","interpro_id":"IPR010960","interpro_name":"Flavocytochrome_c","locations":[{"end":571,"start":120}],"match_end":571,"match_start":120,"name":"flavo_cyto_c"}],"location":{"chromosome_name":"supercont5.1","end_pos":3835277,"start_pos":3833475,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":137,"start":124}}],"name":"osm1","ortholog_annotations":[{"gene_uniquename":"SJAG_00203","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A2.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00203","ortholog_taxonid":4932,"ortholog_uniquename":"YEL047C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00203","ortholog_taxonid":4932,"ortholog_uniquename":"YEL047C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00203","ortholog_taxonid":4932,"ortholog_uniquename":"YJR051W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00203","ortholog_taxonid":4932,"ortholog_uniquename":"YJR051W","reference_uniquename":"PMID:26896847"}],"product":"fumarate reductase Osm1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0010181"],"not-binding":["GO:0016156"]}},"subset_termids":["GO:0005829","GO:0005739","GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005829":null,"GO:0006106":null,"GO:0010181":null,"GO:0016156":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00203.1"],"transcripts_by_uniquename":{"SJAG_00203.1":null},"uniprot_identifier":"B6JXR0","uniquename":"SJAG_00203"}


id: SJAG_00204
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71582],"is_not":false,"summary":null,"term":"GO:0034058"},{"annotations":[90504],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[71583],"is_not":false,"summary":null,"term":"GO:0006623"}],"cellular_component":[{"annotations":[90498],"is_not":false,"summary":null,"term":"GO:0033263"},{"annotations":[90500],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[71581],"is_not":false,"summary":null,"term":"GO:0005770"},{"annotations":[71584],"is_not":false,"summary":null,"term":"GO:1902500"}],"molecular_function":[{"annotations":[90506],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05205","UniProtKB/TrEMBL:B6JV04","InterPro:IPR025941","InterPro:IPR015943","InterPro:IPR036322","EnsemblGenomes-Gn:SJAG_00204"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":35,"start":1}},{"range":{"end":1281,"start":1262}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sea3","uniquename":"SJAG_00209"},{"name":"ubc13","uniquename":"SJAG_00208"},{"name":"csm1","uniquename":"SJAG_00207"},{"name":"ntr2","uniquename":"SJAG_00206"},{"uniquename":"SJAG_00205"},{"name":"vps8","uniquename":"SJAG_00204"},{"name":"osm1","uniquename":"SJAG_00203"},{"name":"rrn6","uniquename":"SJAG_00202"},{"uniquename":"SJAG_05182"},{"uniquename":"SJAG_00199"},{"name":"cdc17","uniquename":"SJAG_00198"}],"genes_by_uniquename":{"HGNC:29122":null,"SJAG_00204":null,"SPAC17A2.06c":null,"YAL002W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Vps8 central TPR","id":"PF12816","interpro_description":"Vacuolar protein sorting-associated protein 8, central domain","interpro_id":"IPR025941","interpro_name":"Vps8_central_dom","locations":[{"end":743,"start":564}],"match_end":743,"match_start":564,"name":"TPR_Vps8"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":250,"start":116},{"end":403,"start":339}],"match_end":403,"match_start":116,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":325,"start":93}],"match_end":325,"match_start":93},{"dbname":"PANTHER","id":"PTHR12616","interpro_description":"Vacuolar protein sorting-associated protein Vps41/Vps8","interpro_id":"IPR045111","interpro_name":"Vps41/Vps8","locations":[{"end":1278,"start":66}],"match_end":1278,"match_start":66,"name":"VACUOLAR PROTEIN SORTING VPS41"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":35,"start":1},{"end":1281,"start":1262}],"match_end":1281,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":35,"start":17}],"match_end":35,"match_start":17,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":10,"start":1}],"match_end":10,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":1281,"start":1272}],"match_end":1281,"match_start":1272,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3833201,"start_pos":3829356,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":36,"start":15}},{"range":{"end":89,"start":65}},{"range":{"end":408,"start":395}},{"range":{"end":732,"start":724}}],"name":"vps8","ortholog_annotations":[{"gene_uniquename":"SJAG_00204","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29122","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00204","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A2.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00204","ortholog_taxonid":4932,"ortholog_uniquename":"YAL002W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00204","ortholog_taxonid":4932,"ortholog_uniquename":"YAL002W","reference_uniquename":"PMID:26896847"}],"product":"CORVET complex WD repeat subunit Vps8","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"]}},"subset_termids":["GO:0005768","GO:0061024","GO:0006605","GO:0016192","GO:0005794","GO:0031410","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005770":null,"GO:0005794":null,"GO:0006623":null,"GO:0008270":null,"GO:0033263":null,"GO:0034058":null,"GO:0045324":null,"GO:1902500":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00204.1"],"transcripts_by_uniquename":{"SJAG_00204.1":null},"uniprot_identifier":"B6JV04","uniquename":"SJAG_00204"}


id: SJAG_00205
data:
  {"coiled_coil_coords":[{"range":{"end":85,"start":54}}],"cv_annotations":{"cellular_component":[{"annotations":[90507],"is_not":false,"summary":null,"term":"GO:0005635"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JV05","EnsemblGenomes-Tr:EEB05206","EnsemblGenomes-Gn:SJAG_00205"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":148,"start":124}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"map1","uniquename":"SJAG_00210"},{"name":"sea3","uniquename":"SJAG_00209"},{"name":"ubc13","uniquename":"SJAG_00208"},{"name":"csm1","uniquename":"SJAG_00207"},{"name":"ntr2","uniquename":"SJAG_00206"},{"uniquename":"SJAG_00205"},{"name":"vps8","uniquename":"SJAG_00204"},{"name":"osm1","uniquename":"SJAG_00203"},{"name":"rrn6","uniquename":"SJAG_00202"},{"uniquename":"SJAG_05182"},{"uniquename":"SJAG_00199"}],"genes_by_uniquename":{"SJAG_00205":null,"SPAC17A2.07c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":85,"start":54}],"match_end":85,"match_start":54,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":148,"start":124}],"match_end":148,"match_start":124,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":148,"start":136}],"match_end":148,"match_start":136,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3829213,"start_pos":3828716,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":75,"start":61}},{"range":{"end":134,"start":123}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00205","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A2.07c","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005635":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00205.1"],"transcripts_by_uniquename":{"SJAG_00205.1":null},"uniprot_identifier":"B6JV05","uniquename":"SJAG_00205"}


id: SJAG_00206
data:
  {"coiled_coil_coords":[{"range":{"end":193,"start":173}}],"cv_annotations":{"biological_process":[{"annotations":[57266],"is_not":false,"summary":null,"term":"GO:0000390"}],"cellular_component":[{"annotations":[90509],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[57267],"is_not":false,"summary":null,"term":"GO:0071008"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05207","EnsemblGenomes-Gn:SJAG_00206","UniProtKB/TrEMBL:B6JV06"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00211"},{"name":"map1","uniquename":"SJAG_00210"},{"name":"sea3","uniquename":"SJAG_00209"},{"name":"ubc13","uniquename":"SJAG_00208"},{"name":"csm1","uniquename":"SJAG_00207"},{"name":"ntr2","uniquename":"SJAG_00206"},{"uniquename":"SJAG_00205"},{"name":"vps8","uniquename":"SJAG_00204"},{"name":"osm1","uniquename":"SJAG_00203"},{"name":"rrn6","uniquename":"SJAG_00202"},{"uniquename":"SJAG_05182"}],"genes_by_uniquename":{"HGNC:1317":null,"SJAG_00206":null,"SPAC17A2.08c":null,"YKR022C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nineteen complex-related protein 2","id":"PF15458","interpro_description":"Pre-mRNA-splicing factor Ntr2","interpro_id":"IPR028211","interpro_name":"Ntr2","locations":[{"end":271,"start":30}],"match_end":271,"match_start":30,"name":"NTR2"},{"dbname":"COILS","id":"Coil","locations":[{"end":193,"start":173}],"match_end":193,"match_start":173,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3828330,"start_pos":3827449,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":29,"start":18}},{"range":{"end":177,"start":166}}],"name":"ntr2","ortholog_annotations":[{"gene_uniquename":"SJAG_00206","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1317","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00206","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A2.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00206","ortholog_taxonid":4932,"ortholog_uniquename":"YKR022C","reference_uniquename":"PMID:29761456"}],"product":"spliceosome complex disassembly protein Ntr2, human GCFC2 ortholog","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000390":null,"GO:0005829":null,"GO:0071008":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00206.1"],"transcripts_by_uniquename":{"SJAG_00206.1":null},"uniprot_identifier":"B6JV06","uniquename":"SJAG_00206"}


id: SJAG_00207
data:
  {"coiled_coil_coords":[{"range":{"end":118,"start":98}},{"range":{"end":162,"start":128}}],"cv_annotations":{"biological_process":[{"annotations":[88323],"is_not":false,"summary":null,"term":"GO:0051315"},{"annotations":[88324],"is_not":false,"summary":null,"term":"GO:0045144"},{"annotations":[88325],"is_not":false,"summary":null,"term":"GO:1990893"}],"cellular_component":[{"annotations":[88315],"is_not":false,"summary":null,"term":"GO:0034506"},{"annotations":[88317],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[88319],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[69377],"is_not":false,"summary":null,"term":"GO:0033551"},{"annotations":[88321],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[88327],"is_not":false,"summary":null,"term":"GO:1990644"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JV07","InterPro:IPR020981","InterPro:IPR040349","GOA:B6JV07","EnsemblGenomes-Gn:SJAG_00207","EnsemblGenomes-Tr:EEB05208"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":36,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vma4","uniquename":"SJAG_00212"},{"uniquename":"SJAG_00211"},{"name":"map1","uniquename":"SJAG_00210"},{"name":"sea3","uniquename":"SJAG_00209"},{"name":"ubc13","uniquename":"SJAG_00208"},{"name":"csm1","uniquename":"SJAG_00207"},{"name":"ntr2","uniquename":"SJAG_00206"},{"uniquename":"SJAG_00205"},{"name":"vps8","uniquename":"SJAG_00204"},{"name":"osm1","uniquename":"SJAG_00203"},{"name":"rrn6","uniquename":"SJAG_00202"}],"genes_by_uniquename":{"SJAG_00207":null,"SPAC11E3.03":null,"YCR086W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Chromosome segregation protein Csm1/Pcs1","id":"PF12539","interpro_description":"Monopolin complex subunit Csm1/Pcs1, C-terminal","interpro_id":"IPR020981","interpro_name":"-Csm1/Pcs1_C","locations":[{"end":252,"start":179}],"match_end":252,"match_start":179,"name":"Csm1"},{"dbname":"CDD","description":"RWD_CSM1","id":"cd23787","locations":[{"end":266,"start":171}],"match_end":266,"match_start":171,"name":"RWD_CSM1"},{"dbname":"GENE3D","id":"G3DSA:3.90.1150.80","interpro_description":"Csm1/Pcs1, C-terminal domain superfamily","interpro_id":"IPR038608","interpro_name":"Csm1/Pcs1_C_sf","locations":[{"end":269,"start":170}],"match_end":269,"match_start":170},{"dbname":"PANTHER","id":"PTHR28006","interpro_description":"Monopolin complex subunit Csm1/Pcs1","interpro_id":"IPR040349","interpro_name":"Csm1/Pcs1","locations":[{"end":269,"start":79}],"match_end":269,"match_start":79,"name":"MONOPOLIN COMPLEX SUBUNIT CSM1"},{"dbname":"COILS","id":"Coil","locations":[{"end":118,"start":98},{"end":162,"start":128}],"match_end":162,"match_start":98,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":36,"start":1}],"match_end":36,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":24,"start":14}],"match_end":24,"match_start":14,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3826652,"start_pos":3825664,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":29,"start":12}},{"range":{"end":154,"start":143}}],"name":"csm1","ortholog_annotations":[{"gene_uniquename":"SJAG_00207","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC11E3.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00207","ortholog_taxonid":4932,"ortholog_uniquename":"YCR086W","reference_uniquename":"PMID:29761456"}],"product":"microtubule-site clamp monopolin complex subunit Csm1/Pcs1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:1990644"]}},"subset_termids":["GO:0005634","GO:0005829","GO:0000070","GO:0000776","GO:0005730","GO:0015630","GO:0060090","GO:0005694","GO:0072686","GO:0140013"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0005829":null,"GO:0033551":null,"GO:0034506":null,"GO:0045144":null,"GO:0051315":null,"GO:0072686":null,"GO:1990644":null,"GO:1990893":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00207.1"],"transcripts_by_uniquename":{"SJAG_00207.1":null},"uniprot_identifier":"B6JV07","uniquename":"SJAG_00207"}


id: SJAG_00208
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":129,"start":129}}],"cv_annotations":{"biological_process":[{"annotations":[88330],"is_not":false,"summary":null,"term":"GO:0120113"},{"annotations":[88331],"is_not":false,"summary":null,"term":"GO:0006301"},{"annotations":[88332],"is_not":false,"summary":null,"term":"GO:0070914"}],"cellular_component":[{"annotations":[88328],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[88329],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[62661],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[88334],"is_not":false,"summary":null,"term":"GO:0061631"},{"annotations":[88335],"is_not":false,"summary":null,"term":"GO:0061630"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JV08","EnsemblGenomes-Gn:SJAG_00208","GOA:B6JV08","InterPro:IPR000608","EnsemblGenomes-Tr:EEB05209","InterPro:IPR023313","InterPro:IPR016135"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nse6","uniquename":"SJAG_00213"},{"name":"vma4","uniquename":"SJAG_00212"},{"uniquename":"SJAG_00211"},{"name":"map1","uniquename":"SJAG_00210"},{"name":"sea3","uniquename":"SJAG_00209"},{"name":"ubc13","uniquename":"SJAG_00208"},{"name":"csm1","uniquename":"SJAG_00207"},{"name":"ntr2","uniquename":"SJAG_00206"},{"uniquename":"SJAG_00205"},{"name":"vps8","uniquename":"SJAG_00204"},{"name":"osm1","uniquename":"SJAG_00203"}],"genes_by_uniquename":{"HGNC:12492":null,"SJAG_00208":null,"SPAC11E3.04c":null,"YDR092W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ubiquitin-conjugating enzyme","id":"PF00179","interpro_description":"Ubiquitin-conjugating enzyme E2, catalytic core domain","interpro_id":"IPR000608","interpro_name":"UBQ-conjugat_E2_core","locations":[{"end":185,"start":49}],"match_end":185,"match_start":49,"name":"UQ_con"},{"dbname":"CDD","description":"UBCc_UBE2N","id":"cd23813","locations":[{"end":189,"start":46}],"match_end":189,"match_start":46,"name":"UBCc_UBE2N"},{"dbname":"PROSITE_PATTERNS","description":"Ubiquitin-conjugating (UBC) active site signature.","id":"PS00183","interpro_description":"Ubiquitin-conjugating enzyme, active site","interpro_id":"IPR023313","interpro_name":"UBQ-conjugating_AS","locations":[{"end":133,"start":118}],"match_end":133,"match_start":118,"name":"UBC_1"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin-conjugating (UBC) core domain profile.","id":"PS50127","interpro_description":"Ubiquitin-conjugating enzyme E2, catalytic core domain","interpro_id":"IPR000608","interpro_name":"UBQ-conjugat_E2_core","locations":[{"end":191,"start":45}],"match_end":191,"match_start":45,"name":"UBC_2"},{"dbname":"SMART","id":"SM00212","locations":[{"end":191,"start":48}],"match_end":191,"match_start":48,"name":"ubc_7"},{"dbname":"FUNFAM","description":"Ubiquitin-conjugating enzyme E2 N","id":"G3DSA:3.10.110.10:FF:000073","locations":[{"end":193,"start":45}],"match_end":193,"match_start":45},{"dbname":"SUPERFAMILY","id":"SSF54495","interpro_description":"Ubiquitin-conjugating enzyme/RWD-like","interpro_id":"IPR016135","interpro_name":"UBQ-conjugating_enzyme/RWD","locations":[{"end":192,"start":38}],"match_end":192,"match_start":38,"name":"UBC-like"},{"dbname":"GENE3D","id":"G3DSA:3.10.110.10","interpro_description":"Ubiquitin-conjugating enzyme/RWD-like","interpro_id":"IPR016135","interpro_name":"UBQ-conjugating_enzyme/RWD","locations":[{"end":193,"start":36}],"match_end":193,"match_start":36,"name":"Ubiquitin Conjugating Enzyme"},{"dbname":"PANTHER","id":"PTHR24068","locations":[{"end":190,"start":70}],"match_end":190,"match_start":70,"name":"UBIQUITIN-CONJUGATING ENZYME E2"}],"location":{"chromosome_name":"supercont5.1","end_pos":3825511,"start_pos":3824770,"strand":"forward"},"name":"ubc13","ortholog_annotations":[{"gene_uniquename":"SJAG_00208","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12492","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00208","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC11E3.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00208","ortholog_taxonid":4932,"ortholog_uniquename":"YDR092W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00208","ortholog_taxonid":4932,"ortholog_uniquename":"YDR092W","reference_uniquename":"PMID:26896847"}],"product":"ubiquitin conjugating enzyme E2 Ubc13","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0061631","GO:0061630"]}},"subset_termids":["GO:0019787","GO:0006281","GO:0016746","GO:0006605","GO:0140096","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0006301":null,"GO:0061630":null,"GO:0061631":null,"GO:0070914":null,"GO:0120113":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00208.1"],"transcripts_by_uniquename":{"SJAG_00208.1":null},"uniprot_identifier":"B6JV08","uniquename":"SJAG_00208"}


id: SJAG_00209
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76213],"is_not":false,"summary":null,"term":"GO:0034198"},{"annotations":[88342],"is_not":false,"summary":null,"term":"GO:1904262"},{"annotations":[76215],"is_not":false,"summary":null,"term":"GO:1904263"}],"cellular_component":[{"annotations":[88336],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[88337],"is_not":false,"summary":null,"term":"GO:1990130"},{"annotations":[88338],"is_not":false,"summary":null,"term":"GO:0061700"}],"molecular_function":[{"annotations":[76211],"is_not":false,"summary":null,"term":"GO:0035591"},{"annotations":[88345],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[88346],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR001680","EnsemblGenomes-Tr:EEB05210","InterPro:IPR016135","UniProtKB/TrEMBL:B6JV09","InterPro:IPR006575","EnsemblGenomes-Gn:SJAG_00209","InterPro:IPR036322","GOA:B6JV09","InterPro:IPR017986"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":74,"start":1}},{"range":{"end":805,"start":765}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pyp3","uniquename":"SJAG_00214"},{"name":"nse6","uniquename":"SJAG_00213"},{"name":"vma4","uniquename":"SJAG_00212"},{"uniquename":"SJAG_00211"},{"name":"map1","uniquename":"SJAG_00210"},{"name":"sea3","uniquename":"SJAG_00209"},{"name":"ubc13","uniquename":"SJAG_00208"},{"name":"csm1","uniquename":"SJAG_00207"},{"name":"ntr2","uniquename":"SJAG_00206"},{"uniquename":"SJAG_00205"},{"name":"vps8","uniquename":"SJAG_00204"}],"genes_by_uniquename":{"HGNC:25706":null,"SJAG_00209":null,"SPAC11E3.05":null,"YDR128W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":355,"start":320},{"end":444,"start":416}],"match_end":444,"match_start":320,"name":"WD40"},{"dbname":"PFAM","description":"RING/Ubox like zinc-binding domain","id":"PF17120","interpro_description":"WDR59/RTC1-like, RING zinc finger domain","interpro_id":"IPR049566","interpro_name":"WDR59_RTC1-like_RING_Znf","locations":[{"end":1310,"start":1254}],"match_end":1310,"match_start":1254,"name":"zf-RING_16"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":357,"start":322}],"match_end":357,"match_start":322,"name":"WD_REPEATS_2"},{"dbname":"PROSITE_PROFILES","description":"RWD domain profile.","id":"PS50908","interpro_description":"RWD domain","interpro_id":"IPR006575","interpro_name":"RWD_dom","locations":[{"end":760,"start":652}],"match_end":760,"match_start":652,"name":"RWD"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":357,"start":322}],"match_end":357,"match_start":322,"name":"WD_REPEATS_REGION"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":309,"start":267},{"end":355,"start":315},{"end":398,"start":359},{"end":444,"start":402},{"end":546,"start":497}],"match_end":546,"match_start":267,"name":"WD40_4"},{"dbname":"SMART","id":"SM00591","interpro_description":"RWD domain","interpro_id":"IPR006575","interpro_name":"RWD_dom","locations":[{"end":760,"start":652}],"match_end":760,"match_start":652,"name":"RWD2001b"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":551,"start":235}],"match_end":551,"match_start":235,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":448,"start":136},{"end":557,"start":481}],"match_end":557,"match_start":136},{"dbname":"PANTHER","id":"PTHR46170","interpro_description":"GATOR complex protein WDR59-like","interpro_id":"IPR049567","interpro_name":"WDR59-like","locations":[{"end":1313,"start":213}],"match_end":1313,"match_start":213,"name":"GATOR COMPLEX PROTEIN WDR59"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":74,"start":1},{"end":805,"start":765}],"match_end":805,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":18,"start":8},{"end":54,"start":44},{"end":783,"start":774}],"match_end":783,"match_start":8,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":39,"start":22},{"end":74,"start":64}],"match_end":74,"match_start":22,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":802,"start":792}],"match_end":802,"match_start":792,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3824461,"start_pos":3820508,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":18,"start":7}},{"range":{"end":53,"start":39}},{"range":{"end":127,"start":113}},{"range":{"end":782,"start":763}}],"name":"sea3","ortholog_annotations":[{"gene_uniquename":"SJAG_00209","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25706","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00209","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC11E3.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00209","ortholog_taxonid":4932,"ortholog_uniquename":"YDR128W","reference_uniquename":"PMID:29761456"}],"product":"GATOR2-SEACAT complex/GATOR1-SEACIT GTPase complex ubiquitin-protein ligase E3 subunit Sea3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0035591","GO:0061630"]}},"subset_termids":["GO:0016746","GO:0019787","GO:0023052","GO:0005773","GO:0060090","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0008270":null,"GO:0034198":null,"GO:0035591":null,"GO:0061630":null,"GO:0061700":null,"GO:1904262":null,"GO:1904263":null,"GO:1990130":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00209.1"],"transcripts_by_uniquename":{"SJAG_00209.1":null},"uniprot_identifier":"B6JV09","uniquename":"SJAG_00209"}


id: SJAG_00210
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88348],"is_not":false,"summary":null,"term":"GO:0010514"},{"annotations":[69565],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[88351],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[88347],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[88352],"is_not":false,"summary":null,"term":"GO:0001228"},{"annotations":[88353],"is_not":false,"summary":null,"term":"GO:0000978"}],"mondo":[{"annotations":[87626],"is_not":false,"summary":null,"term":"MONDO:0012011"},{"annotations":[86501],"is_not":false,"summary":null,"term":"MONDO:0013266"}]},"dbxrefs":["InterPro:IPR002100","UniProtKB/TrEMBL:B6JV10","InterPro:IPR033897","EnsemblGenomes-Gn:SJAG_00210","EnsemblGenomes-Tr:EEB05211","InterPro:IPR036879","GOA:B6JV10"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":32,"start":1}},{"range":{"end":186,"start":161}},{"range":{"end":289,"start":199}},{"range":{"end":391,"start":304}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00215"},{"name":"pyp3","uniquename":"SJAG_00214"},{"name":"nse6","uniquename":"SJAG_00213"},{"name":"vma4","uniquename":"SJAG_00212"},{"uniquename":"SJAG_00211"},{"name":"map1","uniquename":"SJAG_00210"},{"name":"sea3","uniquename":"SJAG_00209"},{"name":"ubc13","uniquename":"SJAG_00208"},{"name":"csm1","uniquename":"SJAG_00207"},{"name":"ntr2","uniquename":"SJAG_00206"},{"uniquename":"SJAG_00205"}],"genes_by_uniquename":{"HGNC:6993":null,"HGNC:6995":null,"HGNC:6996":null,"HGNC:6997":null,"SJAG_00210":null,"SPAC11E3.06":null,"YMR042W":null,"YMR043W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SRF-type transcription factor (DNA-binding and dimerisation domain)","id":"PF00319","interpro_description":"Transcription factor, MADS-box","interpro_id":"IPR002100","interpro_name":"TF_MADSbox","locations":[{"end":78,"start":31}],"match_end":78,"match_start":31,"name":"SRF-TF"},{"dbname":"CDD","description":"MADS_SRF_like","id":"cd00266","interpro_description":"SRF-like, MADS-box","interpro_id":"IPR033897","interpro_name":"SRF-like_MADS-box","locations":[{"end":104,"start":31}],"match_end":104,"match_start":31,"name":"MADS_SRF_like"},{"dbname":"PROSITE_PROFILES","description":"MADS-box domain profile.","id":"PS50066","interpro_description":"Transcription factor, MADS-box","interpro_id":"IPR002100","interpro_name":"TF_MADSbox","locations":[{"end":82,"start":30}],"match_end":82,"match_start":30,"name":"MADS_BOX_2"},{"dbname":"SMART","id":"SM00432","interpro_description":"Transcription factor, MADS-box","interpro_id":"IPR002100","interpro_name":"TF_MADSbox","locations":[{"end":81,"start":2}],"match_end":81,"match_start":2,"name":"madsneu2"},{"dbname":"PRINTS","description":"MADS domain signature","id":"PR00404","interpro_description":"Transcription factor, MADS-box","interpro_id":"IPR002100","interpro_name":"TF_MADSbox","locations":[{"end":80,"start":24}],"match_end":80,"match_start":24,"name":"MADSDOMAIN"},{"dbname":"FUNFAM","description":"Serum response factor b","id":"G3DSA:3.40.1810.10:FF:000002","locations":[{"end":104,"start":34}],"match_end":104,"match_start":34},{"dbname":"SUPERFAMILY","id":"SSF55455","interpro_description":"Transcription factor, MADS-box superfamily","interpro_id":"IPR036879","interpro_name":"TF_MADSbox_sf","locations":[{"end":91,"start":30}],"match_end":91,"match_start":30,"name":"SRF-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.1810.10","interpro_description":"Transcription factor, MADS-box superfamily","interpro_id":"IPR036879","interpro_name":"TF_MADSbox_sf","locations":[{"end":104,"start":34}],"match_end":104,"match_start":34},{"dbname":"PANTHER","id":"PTHR48019","interpro_description":"MADS-box/MEF2 Transcription Factor","interpro_id":"IPR050142","interpro_name":"MADS-box/MEF2_TF","locations":[{"end":185,"start":30}],"match_end":185,"match_start":30,"name":"SERUM RESPONSE FACTOR HOMOLOG"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":32,"start":1},{"end":186,"start":161},{"end":289,"start":199},{"end":391,"start":304}],"match_end":391,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":182,"start":161},{"end":230,"start":199},{"end":252,"start":239},{"end":287,"start":275},{"end":317,"start":304},{"end":380,"start":366}],"match_end":380,"match_start":161,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3820206,"start_pos":3818374,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":113,"start":101}},{"range":{"end":461,"start":454}},{"range":{"end":477,"start":466}},{"range":{"end":521,"start":508}}],"name":"map1","ortholog_annotations":[{"gene_uniquename":"SJAG_00210","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6993","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00210","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6995","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00210","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6996","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00210","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6997","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00210","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC11E3.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00210","ortholog_taxonid":4932,"ortholog_uniquename":"YMR042W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00210","ortholog_taxonid":4932,"ortholog_uniquename":"YMR042W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00210","ortholog_taxonid":4932,"ortholog_uniquename":"YMR043W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00210","ortholog_taxonid":4932,"ortholog_uniquename":"YMR043W","reference_uniquename":"PMID:26896847"}],"product":"DNA-binding transcription factor, MADS-box Map1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000978"],"not-binding":["GO:0001228"]}},"subset_termids":["GO:0023052","GO:0000747","GO:0006355","GO:0006351","MONDO:0005267","MONDO:0000426","GO:0003700","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000978":null,"GO:0001228":null,"GO:0005634":null,"GO:0010514":null,"GO:0023052":null,"GO:0045944":null,"MONDO:0012011":null,"MONDO:0013266":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00210.1"],"transcripts_by_uniquename":{"SJAG_00210.1":null},"uniprot_identifier":"B6JV10","uniquename":"SJAG_00210"}


id: SJAG_00211
data:
  {"cv_annotations":{"biological_process":[{"annotations":[56930],"is_not":false,"summary":null,"term":"GO:1903830"}],"cellular_component":[{"annotations":[70119],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[56929],"is_not":false,"summary":null,"term":"GO:0015095"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00211","UniProtKB/TrEMBL:B6JV11","GOA:B6JV11","EnsemblGenomes-Tr:EEB05212","InterPro:IPR008521"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":360,"start":324}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"syt22","uniquename":"SJAG_00216"},{"uniquename":"SJAG_00215"},{"name":"pyp3","uniquename":"SJAG_00214"},{"name":"nse6","uniquename":"SJAG_00213"},{"name":"vma4","uniquename":"SJAG_00212"},{"uniquename":"SJAG_00211"},{"name":"map1","uniquename":"SJAG_00210"},{"name":"sea3","uniquename":"SJAG_00209"},{"name":"ubc13","uniquename":"SJAG_00208"},{"name":"csm1","uniquename":"SJAG_00207"},{"name":"ntr2","uniquename":"SJAG_00206"}],"genes_by_uniquename":{"SJAG_00211":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Magnesium transporter NIPA","id":"PF05653","interpro_description":"Magnesium transporter NIPA","interpro_id":"IPR008521","interpro_name":"Mg_trans_NIPA","locations":[{"end":291,"start":61}],"match_end":291,"match_start":61,"name":"Mg_trans_NIPA"},{"dbname":"PANTHER","id":"PTHR12570","interpro_description":"Magnesium transporter NIPA","interpro_id":"IPR008521","interpro_name":"Mg_trans_NIPA","locations":[{"end":297,"start":6}],"match_end":297,"match_start":6},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":360,"start":324}],"match_end":360,"match_start":324,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":338,"start":324}],"match_end":338,"match_start":324,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3817921,"start_pos":3816839,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":113,"start":101}},{"range":{"end":341,"start":323}}],"product":"magnesium transporter NIPA","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000108":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0015095"]}},"subset_termids":["GO:0022857","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0015095":null,"GO:0016020":null,"GO:1903830":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":23,"start":4}},{"assigned_by":"TMHMM","range":{"end":62,"start":43}},{"assigned_by":"TMHMM","range":{"end":88,"start":66}},{"assigned_by":"TMHMM","range":{"end":116,"start":97}},{"assigned_by":"TMHMM","range":{"end":158,"start":136}},{"assigned_by":"TMHMM","range":{"end":193,"start":171}},{"assigned_by":"TMHMM","range":{"end":235,"start":213}},{"assigned_by":"TMHMM","range":{"end":264,"start":242}},{"assigned_by":"TMHMM","range":{"end":291,"start":274}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00211.1"],"transcripts_by_uniquename":{"SJAG_00211.1":null},"uniprot_identifier":"B6JV11","uniquename":"SJAG_00211"}


id: SJAG_00212
data:
  {"cv_annotations":{"biological_process":[{"annotations":[69132],"is_not":false,"summary":null,"term":"GO:1902600"},{"annotations":[88357],"is_not":false,"summary":null,"term":"GO:0007035"}],"cellular_component":[{"annotations":[88354],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[88355],"is_not":false,"summary":null,"term":"GO:0000221"}],"molecular_function":[{"annotations":[88358],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[79934],"is_not":false,"summary":null,"term":"GO:0046961"}],"mondo":[{"annotations":[87138],"is_not":false,"summary":null,"term":"MONDO:0027462"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00212","InterPro:IPR002842","EnsemblGenomes-Tr:EEB05213","GOA:B6JV12","InterPro:IPR038495","UniProtKB/TrEMBL:B6JV12"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00217"},{"name":"syt22","uniquename":"SJAG_00216"},{"uniquename":"SJAG_00215"},{"name":"pyp3","uniquename":"SJAG_00214"},{"name":"nse6","uniquename":"SJAG_00213"},{"name":"vma4","uniquename":"SJAG_00212"},{"uniquename":"SJAG_00211"},{"name":"map1","uniquename":"SJAG_00210"},{"name":"sea3","uniquename":"SJAG_00209"},{"name":"ubc13","uniquename":"SJAG_00208"},{"name":"csm1","uniquename":"SJAG_00207"}],"genes_by_uniquename":{"HGNC:18125":null,"HGNC:857":null,"SJAG_00212":null,"SPAC11E3.07":null,"YOR332W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ATP synthase (E/31 kDa) subunit","id":"PF01991","interpro_description":"V-type ATPase subunit E","interpro_id":"IPR002842","interpro_name":"ATPase_V1_Esu","locations":[{"end":217,"start":18}],"match_end":217,"match_start":18,"name":"vATP-synt_E"},{"dbname":"SUPERFAMILY","id":"SSF160527","locations":[{"end":218,"start":90}],"match_end":218,"match_start":90,"name":"V-type ATPase subunit E-like"},{"dbname":"GENE3D","id":"G3DSA:6.10.250.1620","locations":[{"end":64,"start":1}],"match_end":64,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:3.30.2320.30","interpro_description":"V-type ATPase subunit E, C-terminal domain superfamily","interpro_id":"IPR038495","interpro_name":"ATPase_E_C","locations":[{"end":227,"start":93}],"match_end":227,"match_start":93},{"dbname":"PANTHER","id":"PTHR45715","interpro_description":"V-type ATPase subunit E","interpro_id":"IPR002842","interpro_name":"ATPase_V1_Esu","locations":[{"end":220,"start":3}],"match_end":220,"match_start":3,"name":"ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED"},{"dbname":"HAMAP","description":"V-type proton ATPase subunit E [atpE].","id":"MF_00311","interpro_description":"V-type ATPase subunit E","interpro_id":"IPR002842","interpro_name":"ATPase_V1_Esu","locations":[{"end":218,"start":10}],"match_end":218,"match_start":10,"name":"ATP_synth_E_arch"}],"location":{"chromosome_name":"supercont5.1","end_pos":3816332,"start_pos":3815649,"strand":"reverse"},"name":"vma4","ortholog_annotations":[{"gene_uniquename":"SJAG_00212","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18125","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00212","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:857","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00212","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC11E3.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00212","ortholog_taxonid":4932,"ortholog_uniquename":"YOR332W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00212","ortholog_taxonid":4932,"ortholog_uniquename":"YOR332W","reference_uniquename":"PMID:26896847"}],"product":"V-type ATPase V1 subunit E","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016887","GO:0046961"]}},"subset_termids":["GO:0055085","MONDO:0005328","MONDO:0005066","GO:0016887","GO:0022857","GO:0005773","MONDO:0004736","MONDO:0006025"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000221":null,"GO:0000329":null,"GO:0007035":null,"GO:0016887":null,"GO:0046961":null,"GO:1902600":null,"MONDO:0027462":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00212.1"],"transcripts_by_uniquename":{"SJAG_00212.1":null},"uniprot_identifier":"B6JV12","uniquename":"SJAG_00212"}


id: SJAG_00213
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88364],"is_not":false,"summary":null,"term":"GO:0000724"}],"cellular_component":[{"annotations":[88360],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[88361],"is_not":false,"summary":null,"term":"GO:0030915"}],"molecular_function":[{"annotations":[88365],"is_not":false,"summary":null,"term":"GO:0140463"}],"mondo":[{"annotations":[85939],"is_not":false,"summary":null,"term":"MONDO:0859575"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00213","EnsemblGenomes-Tr:EEB05214","UniProtKB/TrEMBL:B6JV13","InterPro:IPR014803"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":40,"start":1}},{"range":{"end":574,"start":546}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gas5","uniquename":"SJAG_00218"},{"uniquename":"SJAG_00217"},{"name":"syt22","uniquename":"SJAG_00216"},{"uniquename":"SJAG_00215"},{"name":"pyp3","uniquename":"SJAG_00214"},{"name":"nse6","uniquename":"SJAG_00213"},{"name":"vma4","uniquename":"SJAG_00212"},{"uniquename":"SJAG_00211"},{"name":"map1","uniquename":"SJAG_00210"},{"name":"sea3","uniquename":"SJAG_00209"},{"name":"ubc13","uniquename":"SJAG_00208"}],"genes_by_uniquename":{"HGNC:17814":null,"SJAG_00213":null,"SPAC11E3.08c":null,"YER038C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DNA repair proteins Nse5 and Nse6","id":"PF08691","interpro_description":"DNA repair protein Nse5/Nse6","interpro_id":"IPR014803","interpro_name":"DNA_repair_Nse5/Nse6","locations":[{"end":508,"start":1}],"match_end":508,"match_start":1,"name":"Nse5"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":40,"start":1},{"end":574,"start":546}],"match_end":574,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":37,"start":14}],"match_end":37,"match_start":14,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":563,"start":552}],"match_end":563,"match_start":552,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3815013,"start_pos":3813169,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":36,"start":13}},{"range":{"end":64,"start":48}},{"range":{"end":185,"start":172}},{"range":{"end":300,"start":288}},{"range":{"end":351,"start":337}},{"range":{"end":461,"start":452}}],"name":"nse6","ortholog_annotations":[{"gene_uniquename":"SJAG_00213","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17814","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00213","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC11E3.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00213","ortholog_taxonid":4932,"ortholog_uniquename":"YER038C","reference_uniquename":"PMID:29761456"}],"product":"Smc5-6 complex non-SMC subunit Nse6","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0140463"]}},"subset_termids":["GO:0005634","GO:0006281","GO:0006310","GO:0005694","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000724":null,"GO:0005634":null,"GO:0030915":null,"GO:0140463":null,"MONDO:0859575":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00213.1"],"transcripts_by_uniquename":{"SJAG_00213.1":null},"uniprot_identifier":"B6JV13","uniquename":"SJAG_00213"}


id: SJAG_00214
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88368],"is_not":false,"summary":null,"term":"GO:0010971"},{"annotations":[72369],"is_not":false,"summary":null,"term":"GO:0007165"}],"cellular_component":[{"annotations":[88366],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[88367],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[72368],"is_not":false,"summary":null,"term":"GO:0004725"}],"mondo":[{"annotations":[87594],"is_not":false,"summary":null,"term":"MONDO:0005148"}]},"dbxrefs":["InterPro:IPR000242","InterPro:IPR000387","EnsemblGenomes-Tr:EEB05215","EnsemblGenomes-Gn:SJAG_00214","GOA:B6JV14","UniProtKB/TrEMBL:B6JV14","InterPro:IPR003595","InterPro:IPR016130","InterPro:IPR029021"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00219"},{"name":"gas5","uniquename":"SJAG_00218"},{"uniquename":"SJAG_00217"},{"name":"syt22","uniquename":"SJAG_00216"},{"uniquename":"SJAG_00215"},{"name":"pyp3","uniquename":"SJAG_00214"},{"name":"nse6","uniquename":"SJAG_00213"},{"name":"vma4","uniquename":"SJAG_00212"},{"uniquename":"SJAG_00211"},{"name":"map1","uniquename":"SJAG_00210"},{"name":"sea3","uniquename":"SJAG_00209"}],"genes_by_uniquename":{"HGNC:9642":null,"HGNC:9650":null,"SJAG_00214":null,"SPAC11E3.09":null,"YDL230W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein-tyrosine phosphatase","id":"PF00102","interpro_description":"Tyrosine-specific protein phosphatase, PTPase domain","interpro_id":"IPR000242","interpro_name":"PTP_cat","locations":[{"end":282,"start":48}],"match_end":282,"match_start":48,"name":"Y_phosphatase"},{"dbname":"CDD","description":"PTP_fungal","id":"cd18533","locations":[{"end":280,"start":74}],"match_end":280,"match_start":74,"name":"PTP_fungal"},{"dbname":"PROSITE_PATTERNS","description":"Tyrosine specific protein phosphatases active site.","id":"PS00383","interpro_description":"Protein-tyrosine phosphatase, active site","interpro_id":"IPR016130","interpro_name":"Tyr_Pase_AS","locations":[{"end":231,"start":221}],"match_end":231,"match_start":221,"name":"TYR_PHOSPHATASE_1"},{"dbname":"PROSITE_PROFILES","description":"PTP type protein phosphatase domain profile.","id":"PS50055","interpro_description":"Tyrosine-specific protein phosphatase, PTPase domain","interpro_id":"IPR000242","interpro_name":"PTP_cat","locations":[{"end":286,"start":49}],"match_end":286,"match_start":49,"name":"TYR_PHOSPHATASE_PTP"},{"dbname":"PROSITE_PROFILES","description":"Tyrosine specific protein phosphatases domain profile.","id":"PS50056","interpro_description":"Tyrosine-specific protein phosphatases domain","interpro_id":"IPR000387","interpro_name":"Tyr_Pase_dom","locations":[{"end":277,"start":199}],"match_end":277,"match_start":199,"name":"TYR_PHOSPHATASE_2"},{"dbname":"SMART","id":"SM00194","interpro_description":"Tyrosine-specific protein phosphatase, PTPase domain","interpro_id":"IPR000242","interpro_name":"PTP_cat","locations":[{"end":288,"start":26}],"match_end":288,"match_start":26,"name":"PTPc_3"},{"dbname":"SMART","id":"SM00404","interpro_description":"Protein-tyrosine phosphatase, catalytic","interpro_id":"IPR003595","interpro_name":"Tyr_Pase_cat","locations":[{"end":285,"start":178}],"match_end":285,"match_start":178,"name":"ptp_7"},{"dbname":"PRINTS","description":"Protein tyrosine phosphatase signature","id":"PR00700","interpro_description":"Tyrosine-specific protein phosphatase, PTPase domain","interpro_id":"IPR000242","interpro_name":"PTP_cat","locations":[{"end":80,"start":73},{"end":108,"start":88},{"end":194,"start":177},{"end":236,"start":218},{"end":279,"start":253}],"match_end":279,"match_start":73,"name":"PRTYPHPHTASE"},{"dbname":"SUPERFAMILY","id":"SSF52799","interpro_description":"Protein-tyrosine phosphatase-like","interpro_id":"IPR029021","interpro_name":"Prot-tyrosine_phosphatase-like","locations":[{"end":283,"start":35}],"match_end":283,"match_start":35,"name":"(Phosphotyrosine protein) phosphatases II"},{"dbname":"GENE3D","id":"G3DSA:3.90.190.10","interpro_description":"Protein-tyrosine phosphatase-like","interpro_id":"IPR029021","interpro_name":"Prot-tyrosine_phosphatase-like","locations":[{"end":292,"start":4}],"match_end":292,"match_start":4,"name":"Protein tyrosine phosphatase superfamily"},{"dbname":"PANTHER","id":"PTHR19134","interpro_description":"Protein-Tyrosine Phosphatase","interpro_id":"IPR050348","interpro_name":"Protein-Tyr_Phosphatase","locations":[{"end":281,"start":28}],"match_end":281,"match_start":28,"name":"RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3811382,"start_pos":3810319,"strand":"reverse"},"name":"pyp3","ortholog_annotations":[{"gene_uniquename":"SJAG_00214","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9642","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00214","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9650","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00214","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC11E3.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00214","ortholog_taxonid":4932,"ortholog_uniquename":"YDL230W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00214","ortholog_taxonid":4932,"ortholog_uniquename":"YDL230W","reference_uniquename":"PMID:26896847"}],"product":"protein tyrosine phosphatase Pyp3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004725"]}},"subset_termids":["GO:0016788","MONDO:0004335","MONDO:0005066","GO:0044772","GO:0023052","GO:0004721","MONDO:0005015","GO:0005829","GO:0005634","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004725":null,"GO:0005634":null,"GO:0005829":null,"GO:0007165":null,"GO:0010971":null,"MONDO:0005148":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00214.1"],"transcripts_by_uniquename":{"SJAG_00214.1":null},"uniprot_identifier":"B6JV14","uniquename":"SJAG_00214"}


