# terms

id: MONDO:0060549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital anomalies of kidney and urinary tract syndrome with or without hearing loss, abnormal ears, or developmental delay","secondary_identifiers":["OMIM:617641","Orphanet:656130","DOID:0112359","UMLS:C4539968","MEDGEN:1612119"],"synonyms":[{"name":"CAKUTHED","type":"related"},{"name":"congenital anomalies of kidney and urinary tract syndrome with or without hearing loss, abnormal ears, or developmental delay","type":"exact"}],"termid":"MONDO:0060549","xrefs":{"Monarch":{"xref_id":"0060549"}}}


id: PBO:0017911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu18","termid":"PBO:0017911"}


id: PATO:0000577
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000577 weight value (obsolete PATO:0000577)","termid":"PATO:0000577"}


id: FYPO:0003152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to heat is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during cellular response to heat","synonyms":[{"name":"increased protein accumulation during cellular response to heat","type":"related"},{"name":"increased protein level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003152"}


id: PBO:0079185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 14, pseudogene","termid":"PBO:0079185"}


id: MONDO:0013643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial juvenile hyperuricemic nephropathy","termid":"MONDO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hyperuricemic nephropathy, familial juvenile type 3","secondary_identifiers":["UMLS:C3280216","MEDGEN:481846","OMIM:614227"],"synonyms":[{"name":"HNFJ3","type":"exact"},{"name":"hyperuricemic nephropathy, familial juvenile, 3","type":"related"}],"termid":"MONDO:0013643","xrefs":{"Monarch":{"xref_id":"0013643"}}}


id: PBO:0064070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 104","termid":"PBO:0064070"}


id: MONDO:0022263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital hepatic fibrosis (obsolete MONDO:0022263)","termid":"MONDO:0022263","xrefs":{"Monarch":{"xref_id":"0022263"}}}


id: GO:0044238
data:
  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id: GO:0019386
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other compounds, including carbon dioxide (CO2).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"methanogenesis, from carbon dioxide","secondary_identifiers":["MetaCyc:METHANOGENESIS-PWY"],"synonyms":[{"name":"methane biosynthesis from carbon dioxide","type":"exact"},{"name":"methane biosynthetic process from carbon dioxide","type":"exact"}],"termid":"GO:0019386"}


id: MONDO:1012093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephropathy, non-human animal","termid":"MONDO:1011905"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomerulonephropathy, dog","secondary_identifiers":["OMIA:000414-9615"],"termid":"MONDO:1012093","xrefs":{"Monarch":{"xref_id":"1012093"}}}


id: PBO:0065295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 2","termid":"PBO:0065295"}


id: MONDO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Neoplasms composed of primordial germ cells of embryonic gonads or of elements of the germ layers of the embryo, mammalian. The concept does not refer to neoplasms located in the gonads or present in an embryo or fetus.","definition_xrefs":["MESH:D009373"],"gene_count":0,"genotype_count":0,"name":"obsolete germ cell and embryonal cancer (obsolete MONDO:0002510)","secondary_identifiers":["DOID:3095"],"synonyms":[{"name":"germ cell and embryonal neoplasm","type":"related"}],"termid":"MONDO:0002510","xrefs":{"Monarch":{"xref_id":"0002510"}}}


id: PR:Q9UUH3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug58 gene.","definition_xrefs":["UniProtKB:Q9UUH3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized kinase mug58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.09c","synonyms":[{"name":"Spom972h-mug58","type":"exact"},{"name":"meiotically up-regulated gene 58 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUH3"}


id: GO:0050432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of catecholamines by a cell. The catecholamines are a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.","definition_xrefs":["GOC:ai","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"catecholamine transport","termid":"GO:0051937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"catecholamine secretion","termid":"GO:0050432"}


id: GO:0001939
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pronucleus originating from the ovum that is being fertilized.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronucleus","termid":"GO:0045120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"female pronucleus","termid":"GO:0001939"}


id: PBO:0063538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudopodium enriched atypical kinase 1","termid":"PBO:0063538"}


id: MOD:01654
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride, to form N6-Dansyl-lysine.","definition_xrefs":["Unimod:139#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"dansyl chloride derivatized residue","termid":"MOD:01653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-Dansyl derivatized lysine","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"N6DansylLys","type":"exact"}],"termid":"MOD:01654"}


id: PBO:0030555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import","termid":"PBO:0030555"}


id: GO:0046569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxal + O2 + H2O = glyoxalate + H2O2.","definition_xrefs":["PMID:11733005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glyoxal oxidase activity","synonyms":[{"name":"GLOX","type":"exact"}],"termid":"GO:0046569"}


id: PBO:0079123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid stimulating hormone subunit beta","termid":"PBO:0079123"}


id: PBO:0047961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAT regulator of WNT signaling pathway 1","termid":"PBO:0047961"}


id: GO:0034670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of arachidonic acid.","definition_xrefs":["GOC:go_curators","PMID:18202452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to arachidonate","synonyms":[{"name":"chemotaxis to arachidonic acid","type":"exact"}],"termid":"GO:0034670"}


id: PBO:0044409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily F member 2, pseudogene","termid":"PBO:0044409"}


id: GO:0050433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of catecholamines.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of catecholamine secretion","termid":"GO:0050433"}


id: MONDO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the pharynx.","definition_xrefs":["NCIT:C102872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx cancer","termid":"MONDO:0005517"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"},{"relation_name":"is_a","term_name":"carcinoma of pharynx","termid":"MONDO:0021345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pharyngeal squamous cell carcinoma","secondary_identifiers":["MEDGEN:728086","SCTID:408649007","DOID:0050921","EFO:1001965","UMLS:C1319317"],"synonyms":[{"name":"pharyngeal (including hypopharyngeal and oropharyngeal) squamous cell carcinoma","type":"exact"},{"name":"pharyngeal squam. cell carcinoma","type":"exact"},{"name":"pharyngeal squamous cell carcinoma","type":"exact"},{"name":"pharyngeal throat squamous cell cancer","type":"exact"},{"name":"pharynx squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0000536","xrefs":{"Monarch":{"xref_id":"0000536"}}}


id: PBO:0053501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 484","termid":"PBO:0053501"}


id: GO:0002842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a T cell mediated immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"is_a","term_name":"positive regulation of immune response to tumor cell","termid":"GO:0002839"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immune response to tumor cell","termid":"GO:0002840"},{"relation_name":"positively_regulates","term_name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell mediated immune response to tumor cell","synonyms":[{"name":"activation of T cell mediated immune response to tumor cell","type":"narrow"},{"name":"positive regulation of T cell mediated immune response to tumour cell","type":"exact"},{"name":"positive regulation of T lymphocyte mediated immune response to tumor cell","type":"exact"},{"name":"positive regulation of T-cell mediated immune response to tumor cell","type":"exact"},{"name":"positive regulation of T-lymphocyte mediated immune response to tumor cell","type":"exact"},{"name":"stimulation of T cell mediated immune response to tumor cell","type":"narrow"},{"name":"up regulation of T cell mediated immune response to tumor cell","type":"exact"},{"name":"up-regulation of T cell mediated immune response to tumor cell","type":"exact"},{"name":"upregulation of T cell mediated immune response to tumor cell","type":"exact"}],"termid":"GO:0002842"}


id: MONDO:0009008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart defect - tongue hamartoma - polysyndactyly syndrome","secondary_identifiers":["GARD:4166","MESH:C535849","MEDGEN:341804","Orphanet:1338","DOID:0111591","UMLS:C1857587","OMIM:217085"],"synonyms":[{"name":"CHDTHP","type":"related"},{"name":"Orstavik Lindemann Solberg syndrome","type":"related"},{"name":"Ostravik-Lindemann-Solberg syndrome","type":"exact"},{"name":"congenital heart defects, hamartomas of tongue, and polysyndactyly","type":"related"},{"name":"heart defect - tongue hamartoma - polysyndactyly syndrome","type":"exact"},{"name":"heart defect, tongue hamartoma and polysyndactyly","type":"related"}],"termid":"MONDO:0009008","xrefs":{"Monarch":{"xref_id":"0009008"}}}


id: PBO:0082500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of Dcp1p-Dcp2p decapping enzyme complex; removes 5' cap structure from mRNAs prior to their degradation; also enters nucleus and positively regulates transcription initiation; nudix hydrolase family member; forms cytoplasmic foci upon DNA replication stress; human homolog DCP2 complements yeast dcp2 thermosensitive mutant","termid":"PBO:0082500"}


id: GO:0042608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a T cell receptor, the antigen-recognizing receptor on the surface of T cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"T cell receptor binding","synonyms":[{"name":"T lymphocyte receptor binding","type":"exact"},{"name":"T-cell receptor binding","type":"exact"},{"name":"T-lymphocyte receptor binding","type":"exact"},{"name":"TCR binding","type":"exact"}],"termid":"GO:0042608"}


id: PBO:0045148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 6","termid":"PBO:0045148"}


id: GO:0090518
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104148],"is_not":false,"summary":null,"term":"GO:0090518"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane import into vacuole","termid":"GO:0034490"},{"relation_name":"is_a","term_name":"L-arginine transmembrane transport","termid":"GO:1903826"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"L-arginine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090458"],"synonyms":[{"name":"arginine transmembrane import into vacuole","type":"broad"},{"name":"vacuolar arginine import","type":"exact"}],"termid":"GO:0090518","terms_by_termid":{"GO:0090518":null}}


id: FYPO:0005533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 at the IRC1L boundary element occurs to a lower extent than normal.","definition_xrefs":["PMID:25972440","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone acetylation during vegetative growth","termid":"FYPO:0000331"},{"relation_name":"is_a","term_name":"abnormal histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0005532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H4-K16 acetylation at boundary element IRC1L during vegetative growth","synonyms":[{"name":"decreased histone H4-K16 acetylation at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"decreased histone H4K16 acetylation at centromeric boundary element IRC1L during vegetative growth","type":"exact"},{"name":"reduced histone H4-K16 acetylation at boundary element IRC1L during vegetative growth","type":"exact"}],"termid":"FYPO:0005533"}


id: PBO:0030904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_organization_during_vegetative_growth","termid":"PBO:0030904"}


id: GO:0071726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diacylated bacterial lipopeptide stimulus.","definition_xrefs":["PMID:12524386","PMID:2757794","PMID:12077222","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to bacterial lipopeptide","termid":"GO:0071221"},{"relation_name":"is_a","term_name":"response to diacyl bacterial lipopeptide","termid":"GO:0071724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diacyl bacterial lipopeptide","synonyms":[{"name":"cellular response to diacylated bacterial lipoprotein","type":"exact"}],"termid":"GO:0071726"}


id: PBO:0061214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 6","termid":"PBO:0061214"}


id: MONDO:0007989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital microcoria is a rare autosomal dominant ophthalmological disease caused by maldevelopment of the dilator muscle of the pupil that is characterized by small pupils (<2 mm in diameter) from birth, peripheral iris hypopigmentation and transillumination defects leading to errors of refraction (myopia, astigmatism) and sometimes juvenile open angle glaucoma.","definition_xrefs":["Orphanet:566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridogoniodysgenesis","termid":"MONDO:0011119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital microcoria","secondary_identifiers":["OMIM:156600","MESH:C537550","MEDGEN:227002","UMLS:C1303009","GARD:3635","SCTID:400962005"],"synonyms":[{"name":"Mcor","type":"related"},{"name":"chromosome 13Q32 deletion syndrome","type":"related"},{"name":"congenital miosis","type":"exact"},{"name":"microcoria, congenital","type":"related"},{"name":"miosis, congenital","type":"related"},{"name":"pinhole pupils","type":"related"}],"termid":"MONDO:0007989","xrefs":{"Monarch":{"xref_id":"0007989"}}}


id: GO:1904508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to basolateral plasma membrane.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:26115433","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein localization to basolateral plasma membrane","termid":"GO:1903361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to basolateral plasma membrane","synonyms":[{"name":"regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"regulation of protein localization in basolateral plasma membrane","type":"exact"}],"termid":"GO:1904508"}


id: GO:0006290
data:
  {"annotated_genes":["SJAG_01262","SJAG_03613","SJAG_00500"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106271],"is_not":false,"summary":null,"term":"GO:0006290"},{"annotations":[117023,117022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000720"}]},"cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T and C-C dimers.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00500":null,"SJAG_01262":null,"SJAG_03613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"pyrimidine dimer repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006290","terms_by_termid":{"GO:0000720":null,"GO:0006290":null}}


id: GO:0042629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Coarse, bluish-black staining cytoplasmic granules, bounded by a plasma membrane and found in mast cells and basophils. Contents include histamine, heparin, chondroitin sulfates, chymase and tryptase.","definition_xrefs":["PMID:12360215","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mast cell granule","termid":"GO:0042629"}


id: MONDO:0007988
data:
  {"annotated_genes":["SJAG_05245"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054593"}]},"cv_name":"mondo","definition":"Autosomal dominant form of microcephaly (disease).","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"isolated congenital microcephaly","termid":"MONDO:0016056"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"autosomal dominant primary microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:14725","GARD:3605","icd11.foundation:774437947","OMIM:156580","MESH:C537323","UMLS:C0220693","MEDGEN:66319","Orphanet:2514"],"synonyms":[{"name":"autosomal dominant microcephaly","type":"related"},{"name":"autosomal dominant primary microcephaly","type":"exact"},{"name":"microcephaly (disease), autosomal dominant","type":"exact"},{"name":"microcephaly autosomal dominant","type":"related"},{"name":"microcephaly with autosomal dominant inheritance","type":"related"},{"name":"microcephaly, autosomal dominant","type":"related"}],"termid":"MONDO:0007988","terms_by_termid":{"MONDO:0054593":null},"xrefs":{"Monarch":{"xref_id":"0007988"}}}


id: MONDO:0700140
data:
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id: MONDO:0018180
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id: MONDO:1011206
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id: PBO:0054209
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id: GO:0034151
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id: GO:0022624
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id: MONDO:0007087
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id: MONDO:0020773
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id: MONDO:0015145
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id: PBO:0085622
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id: GO:1903132
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id: GO:0051392
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72683],"is_not":false,"summary":null,"term":"GO:0051392"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in tRNA + acetyl-CoA + ATP + H2O = ADP + an N4-acetylcytidine in tRNA + CoA + H+ + phosphate.","definition_xrefs":["PMID:15037780","RHEA:53876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"tRNA N4-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"tRNA cytidine N4-acetyltransferase activity","type":"exact"}],"termid":"GO:0051392","terms_by_termid":{"GO:0051392":null}}


id: MONDO:0012476
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85394],"is_not":false,"summary":null,"term":"MONDO:0012476"}]},"cv_name":"mondo","definition":"Autosomal spastic paraplegia type 30 (SPG30) is a form of hereditary spastic paraplegia characterized by either a pure spastic paraplegia phenotype, usually presenting in the first or second decade of life, with spastic lower extremities, usteady spastic gait, hyperreflexia and extensor plantar responses, or as a complicated phenotype with the additional manifestations of distal wasting, saccadic ocular movements, mild cerebellar ataxia and mild, distal, axonal neuropathy.","definition_xrefs":["Orphanet:101010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"},{"relation_name":"is_a","term_name":"KIF1A related neurological disorder","termid":"MONDO:0700055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 30","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16942","OMIM:610357","SCTID:763377006","UMLS:C5235139","MESH:C563677","MEDGEN:1710020","DOID:0110781"],"synonyms":[{"name":"KIF1A hereditary spastic paraplegia","type":"exact"},{"name":"SPG30","type":"exact"},{"name":"autosomal recessive spastic paraplegia 30","type":"exact"},{"name":"autosomal spastic paraplegia type 30","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in KIF1A","type":"exact"},{"name":"hereditary spastic paraplegia type 30","type":"exact"},{"name":"spastic paraplegia 30, autosomal dominant","type":"exact"},{"name":"spastic paraplegia 30, autosomal recessive","type":"related"}],"termid":"MONDO:0012476","terms_by_termid":{"MONDO:0012476":null},"xrefs":{"Monarch":{"xref_id":"0012476"}}}


id: PBO:0013769
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EXOC1","termid":"PBO:0013769"}


id: PR:O43047
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GrpE protein homolog 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GrpE protein homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.19","secondary_identifiers":["UniProtKB:O43047"],"synonyms":[{"name":"Spom972h-GRPEL1","type":"exact"}],"termid":"PR:O43047"}


id: GO:0047927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin 44 + 2-oxoglutarate + O2 = gibberellin 19 + succinate + CO2.","definition_xrefs":["PMID:32652020"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin-44 dioxygenase activity (obsolete GO:0047927)","termid":"GO:0047927"}


id: MONDO:0004084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uveal epithelioid cell melanoma (obsolete MONDO:0004084)","termid":"MONDO:0004084","xrefs":{"Monarch":{"xref_id":"0004084"}}}


id: PBO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DNL","termid":"PBO:0000399"}


id: PBO:0060196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 17, cell surface associated","termid":"PBO:0060196"}


id: MONDO:1010233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, non-human animal","secondary_identifiers":["OMIA:000487"],"termid":"MONDO:1010233","xrefs":{"Monarch":{"xref_id":"1010233"}}}


id: MONDO:0800365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX14 defect","termid":"MONDO:0100268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019053","MONDO:0005066","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder, complementation group K","secondary_identifiers":["MEDGEN:356487","UMLS:C1866257"],"synonyms":[{"name":"CGK","type":"exact"}],"termid":"MONDO:0800365","xrefs":{"Monarch":{"xref_id":"0800365"}}}


id: GO:0008988
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine in rRNA + S-adenosyl-L-methionine = H+ + N(6)-methyladenosine in rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:58728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"rRNA (adenine-N6-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ErmC 23S rRNA methyltransferase","type":"narrow"},{"name":"S-adenosyl-L-methionine:rRNA (adenine-6-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (adenine-N6-)-methyltransferase activity","type":"related"},{"name":"gene ksgA methyltransferase","type":"narrow"},{"name":"ribonucleic acid-adenine (N(6)) methylase activity","type":"related"},{"name":"ribonucleic acid-adenine (N6) methylase activity","type":"related"},{"name":"ribosomal ribonucleate adenine 6-methyltransferase activity","type":"related"}],"termid":"GO:0008988","terms_by_termid":{"GO:0052907":null}}


id: PBO:0053959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1266","termid":"PBO:0053959"}


id: PBO:0075599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPNS2 antisense RNA 1","termid":"PBO:0075599"}


id: PR:Q9HGM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An X-ray repair cross-complementing protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04075","PRO:DNx","PANTHER:PTHR12604:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase II subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.03c","secondary_identifiers":["UniProtKB:Q9HGM8"],"synonyms":[{"name":"ATP-dependent DNA helicase II subunit Ku80 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-XRCC5","type":"exact"},{"name":"pombe Ku80 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGM8"}


id: GO:0016530
data:
  {"annotated_genes":["SJAG_04553","SJAG_02994","SJAG_04403","SJAG_03231","SJAG_00532","SJAG_03862","SJAG_02895","SJAG_03296","SJAG_01418","SJAG_00449"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68085,68429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140663"},{"annotations":[102442,61593,89352,105035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016531"},{"annotations":[100902,114209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034986"},{"annotations":[93292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140132"},{"annotations":[93466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016532"}]},"cv_name":"molecular_function","definition":"Binding to and delivering metal ions to a target protein.","definition_xrefs":["PMID:11739376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_00532":null,"SJAG_01418":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03231":null,"SJAG_03296":null,"SJAG_03862":null,"SJAG_04403":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"metallochaperone activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0016530","terms_by_termid":{"GO:0016531":null,"GO:0016532":null,"GO:0034986":null,"GO:0140132":null,"GO:0140663":null}}


id: PBO:0086521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; partially overlaps snR10, a snoRNA required for preRNA processing","termid":"PBO:0086521"}


id: MONDO:0010017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, inherited or acquired syndrome characterized by the presence of histiocytes in the bone marrow which contain granules stained blue with hematoxylin-eosin stain, mild thrombocytopenia and purpura, and splenomegaly.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005046","MONDO:0005066"],"is_obsolete":false,"name":"sea-blue histiocyte syndrome","secondary_identifiers":["UMLS:C0036489","DOID:4423","GARD:8241","MEDGEN:19908","NCIT:C85062","MESH:D012618","OMIM:269600","Orphanet:158029","SCTID:37821003"],"synonyms":[{"name":"SEA-blue histiocyte disease","type":"related"},{"name":"histiocytosis, Sea-blue","type":"related"},{"name":"inherited Lipemic splenomegaly","type":"related"},{"name":"sea-blue histiocytosis","type":"related"}],"termid":"MONDO:0010017","xrefs":{"Monarch":{"xref_id":"0010017"}}}


id: PBO:0061224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein with MIF4G domain 1","termid":"PBO:0061224"}


id: PBO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap104","termid":"PBO:0002294"}


id: GO:0008917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + lipopolysaccharide = UDP + N-acetyl-D-glucosaminyl-lipopolysaccharide.","definition_xrefs":["GOC:mr","EC:2.4.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"lipopolysaccharide N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:RXN-22502"],"synonyms":[{"name":"LPS N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"UDP-N-acetyl-D-glucosamine:lipopolysaccharide N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine-lipopolysaccharide N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-lipopolysaccharide acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0008917"}


id: PATO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in an entity exhibiting the physical characteristics of an amorphous (non-crystalline) form of matter between a gas and a solid that has a definite volume, but no definite shape.","direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality of a liquid","synonyms":[{"name":"liquidity","type":"exact"}],"termid":"PATO:0001548"}


id: PBO:0044640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping mRNA 2","termid":"PBO:0044640"}


id: PBO:0089735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin-beta family nuclear import receptor Los1","termid":"PBO:0089735"}


id: MONDO:0024490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"general tumor grading characteristic","termid":"MONDO:0024489"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade X, general grading system","synonyms":[{"name":"undetermined grade","type":"exact"}],"termid":"MONDO:0024490","xrefs":{"Monarch":{"xref_id":"0024490"}}}


id: GO:0160043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of catecholamine by a cell in which the catecholamine acts as a neurotransmitter.","definition_xrefs":["PMID:10191060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"}


id: GO:0034300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:mah","PMID:32839172","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporangiospore formation","termid":"GO:0034300"}


id: PBO:0051190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-8 (non-functional)","termid":"PBO:0051190"}


id: PBO:0069186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 440, pseudogene","termid":"PBO:0069186"}


id: GO:0048664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neuron regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"neuron fate commitment","termid":"GO:0048663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate determination","termid":"GO:0048664"}


id: PBO:0079806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B27, pseudogene","termid":"PBO:0079806"}


id: PBO:0070026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1323, pseudogene","termid":"PBO:0070026"}


id: PBO:0051148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30","termid":"PBO:0051148"}


id: GO:0050160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + orsellinate depside = 2 o-orsellinate + H+.","definition_xrefs":["EC:3.1.1.40","RHEA:19549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"orsellinate-depside hydrolase activity","secondary_identifiers":["KEGG_REACTION:R00054","MetaCyc:ORSELLINATE-DEPSIDE-HYDROLASE-RXN"],"synonyms":[{"name":"lecanorate hydrolase activity","type":"related"}],"termid":"GO:0050160"}


id: PBO:0028167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028167"}


id: PBO:0047873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(3)(p14.2)","termid":"PBO:0047873"}


id: PBO:0031797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_G2/M_phase_transition_(obsolete_FYPO:0000404)","termid":"PBO:0031797"}


id: PBO:0003327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Stt4 (predicted)","termid":"PBO:0003327"}


id: PBO:0039524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 5","termid":"PBO:0039524"}


id: GO:0050600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11,12-saturated fatty acyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (11E)-delta11-fatty acyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA 11-(E)-desaturase activity","secondary_identifiers":["EC:1.14.19.24","MetaCyc:1.14.99.31-RXN"],"synonyms":[{"name":"acyl-CoA delta11-desaturase activity","type":"broad"},{"name":"myristoyl-CoA 11-(E) desaturase activity","type":"narrow"}],"termid":"GO:0050600"}


id: PBO:0073729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem-loop binding protein","termid":"PBO:0073729"}


id: PBO:0044056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin SA pseudogene 1","termid":"PBO:0044056"}


id: PBO:0004822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase complex subunit Mak10 (predicted)","termid":"PBO:0004822"}


id: MONDO:1011353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radiculitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiculitis, non-human animal","termid":"MONDO:1011353","xrefs":{"Monarch":{"xref_id":"1011353"}}}


id: GO:1905246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["GOC:TermGenie","PMID:21745575","GO_REF:0000059","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of aspartic-type peptidase activity (obsolete GO:1905246)","synonyms":[{"name":"down regulation of aspartic-type peptidase activity","type":"exact"},{"name":"down-regulation of aspartic-type peptidase activity","type":"exact"},{"name":"downregulation of aspartic-type peptidase activity","type":"exact"},{"name":"inhibition of aspartic-type peptidase activity","type":"narrow"},{"name":"pepsin inhibitor","type":"related"}],"termid":"GO:1905246"}


id: MONDO:0010503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bartter syndrome in which the cause of the disease is a mutation in the MAGED2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome","termid":"MONDO:0015231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter disease type 5","secondary_identifiers":["UMLS:C4310820","OMIM:300971","Orphanet:570371","MEDGEN:934787","DOID:0110147","GARD:22308"],"synonyms":[{"name":"BARTS5","type":"exact"},{"name":"Bartter syndrome caused by mutation in MAGED2","type":"exact"},{"name":"Bartter syndrome, type 5, antenatal, transient","type":"exact"},{"name":"Bartter syndrome, type 5, antenatal, transient, X-linked recessive","type":"exact"},{"name":"MAGED2 Bartter syndrome","type":"exact"}],"termid":"MONDO:0010503","xrefs":{"Monarch":{"xref_id":"0010503"}}}


id: MONDO:0008826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis-hyperkeratosis syndrome, lethal form is an arthrogryposis syndrome, described in two siblings to date, characterized by the association of multiple congenital joint contractures (of the large joints, fingers and toes) and hyperkeratosis (i.e. thick, scaling and fissured skin), with death occurring in early infancy. There have been no further reports in the literature since 1993.","definition_xrefs":["Orphanet:1485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis-hyperkeratosis syndrome, lethal form","secondary_identifiers":["MESH:C535883","SCTID:726620005","UMLS:C1859710","MEDGEN:349230","OMIM:208158","GARD:3053"],"synonyms":[{"name":"Johnston Aarons Schelley syndrome","type":"related"},{"name":"Johnston-Aarons-Schelley syndrome","type":"exact"},{"name":"Joint contractures, hyperkeratosis, and severe hypoplasia of the posterior columns","type":"related"},{"name":"arthrogryposis with hyperkeratosis","type":"related"}],"termid":"MONDO:0008826","xrefs":{"Monarch":{"xref_id":"0008826"}}}


id: PBO:0089773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3818 and PXA domain conserved fungal protein","termid":"PBO:0089773"}


id: MONDO:0002577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal tumor with skeletal muscle differentiation, arising from the extrahepatic bile ducts.","definition_xrefs":["NCIT:C5860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver rhabdomyosarcoma","termid":"MONDO:0002849"},{"relation_name":"is_a","term_name":"extrahepatic bile duct sarcoma","termid":"MONDO:0024658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct rhabdomyosarcoma","secondary_identifiers":["MEDGEN:473530","DOID:3254","UMLS:C2064434"],"synonyms":[{"name":"bile duct rhabdomyosarcoma","type":"related"},{"name":"bile duct rhabdomyosarcoma (disease)","type":"exact"},{"name":"extrahepatic bile duct rhabdomyosarcoma","type":"exact"},{"name":"extrahepatic bile duct rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of extrahepatic bile duct","type":"exact"},{"name":"rhabdomyosarcoma of extrahepatic bile duct","type":"exact"},{"name":"rhabdomyosarcoma of the bile duct","type":"exact"},{"name":"rhabdomyosarcoma of the extrahepatic bile duct","type":"exact"}],"termid":"MONDO:0002577","xrefs":{"Monarch":{"xref_id":"0002577"}}}


id: PBO:0005517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing protein Rik1","termid":"PBO:0005517"}


id: GO:0097155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of sensory neuron axons into a bundle of rods, known as a fascicle.","definition_xrefs":["PMID:18403711","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal fasciculation","termid":"GO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fasciculation of sensory neuron axon","termid":"GO:0097155"}


id: PBO:0080812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 2","termid":"PBO:0080812"}


id: FYPO:0003103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from mRNA transcripts measured in a cell is lower than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased mRNA-derived small RNA level","synonyms":[{"name":"decreased accumulation of mRNA-derived small RNAs","type":"related"},{"name":"decreased mRNA-derived small RNA accumulation","type":"related"},{"name":"decreased mRNA-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"decreased mRNA-derived small RNA level during vegetative growth","type":"exact"},{"name":"decreased mRNA-derived small transcript level","type":"exact"},{"name":"decreased protein-coding gene-derived small RNA level","type":"related"},{"name":"reduced mRNA-derived small RNA level","type":"exact"}],"termid":"FYPO:0003103"}


id: PBO:0036128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0036128"}


id: PR:Q9P6S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6S4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.03","synonyms":[{"name":"Spom972h-meu25","type":"exact"}],"termid":"PR:Q9P6S4"}


id: PBO:0041305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 15","termid":"PBO:0041305"}


id: PBO:0087516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; in concert with Sgs1p-Top2p-Rmi1p, stimulates DNA catenation/decatenation activity of Top3p; protein abundance increases in response to DNA replication s","termid":"PBO:0087516"}


id: PBO:0081923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 892","termid":"PBO:0081923"}


id: PBO:0084364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipase with specificity for monoacylglycerol; preferred substrate is 1-oleoylglycerol; null mutation affects lipid droplet morphology and overexpression causes increased accumulation of reactive oxygen species","termid":"PBO:0084364"}


id: PBO:0083502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified non essential genes ERV2/YPR037C and TIP41/YPR040W","termid":"PBO:0083502"}


id: PBO:0076529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 42","termid":"PBO:0076529"}


id: MONDO:0012240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the TPM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"},{"relation_name":"is_a","term_name":"childhood-onset nemaline myopathy","termid":"MONDO:0015738"},{"relation_name":"is_a","term_name":"TPM2-related myopathy","termid":"MONDO:0100196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital myopathy 23","secondary_identifiers":["DOID:0110932","MESH:C538351","GARD:15454","NCIT:C164225","MEDGEN:324513","OMIM:609285","UMLS:C1836447"],"synonyms":[{"name":"CAPM2","type":"exact"},{"name":"NEM4","type":"exact"},{"name":"TPM2 nemaline myopathy","type":"exact"},{"name":"cap myopathy 2","type":"exact"},{"name":"nemaline myopathy 4","type":"exact"},{"name":"nemaline myopathy 4, autosomal dominant","type":"exact"},{"name":"nemaline myopathy caused by mutation in TPM2","type":"exact"},{"name":"nemaline myopathy type 4","type":"exact"}],"termid":"MONDO:0012240","xrefs":{"Monarch":{"xref_id":"0012240"}}}


id: GO:0016014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising alpha- and beta-dystrobrevin; forms part of the dystrophin glycoprotein complex.","definition_xrefs":["PMID:16710609","PMID:15117830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystrophin-associated glycoprotein complex","termid":"GO:0016010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"dystrobrevin complex","termid":"GO:0016014"}


id: PBO:0004798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Scj1 (predicted)","termid":"PBO:0004798"}


id: PBO:0043233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 4","termid":"PBO:0043233"}


id: PBO:0044661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 3","termid":"PBO:0044661"}


id: MONDO:0011112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Wilms tumor in which the cause of the disease is a mutation in the POU6F2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary Wilms tumor","termid":"MONDO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"Wilms tumor 5","secondary_identifiers":["GARD:15336","UMLS:C1832099","MEDGEN:316905","OMIM:601583","MESH:C536707"],"synonyms":[{"name":"WT5","type":"related"},{"name":"Wilms tumor 5","type":"exact"},{"name":"Wilms tumor and radial bilateral aplasia","type":"related"},{"name":"Wilms tumor susceptibility-5, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumor type 5","type":"exact"},{"name":"Wilms tumor, susceptibility to","type":"related"},{"name":"Wilms tumour and radial bilateral aplasia","type":"related"},{"name":"Wilms tumour susceptibility-5, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumour type 5","type":"exact"},{"name":"bilateral radial aplasia with Wilms tumor","type":"related"},{"name":"bilateral radial aplasia with Wilms tumour","type":"related"}],"termid":"MONDO:0011112","xrefs":{"Monarch":{"xref_id":"0011112"}}}


id: GO:1903518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single strand break repair.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:17395247","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"positively_regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"positive regulation of single strand break repair","synonyms":[{"name":"activation of single strand break repair","type":"narrow"},{"name":"up regulation of single strand break repair","type":"exact"},{"name":"up-regulation of single strand break repair","type":"exact"},{"name":"upregulation of single strand break repair","type":"exact"}],"termid":"GO:1903518"}


id: PR:Q09094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.14","synonyms":[{"name":"Spom972h-rec15","type":"exact"}],"termid":"PR:Q09094"}


id: MONDO:0800382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 11","secondary_identifiers":["UMLS:C3279203","MEDGEN:480833"],"synonyms":[{"name":"JBTS11","type":"exact"}],"termid":"MONDO:0800382","xrefs":{"Monarch":{"xref_id":"0800382"}}}


id: MONDO:0004888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary choroidal atrophy","termid":"MONDO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"partial circumpapillary choroid dystrophy","secondary_identifiers":["ICD9:363.51","UMLS:C0154895","SCTID:193466003","MEDGEN:509704","DOID:9811"],"termid":"MONDO:0004888","xrefs":{"Monarch":{"xref_id":"0004888"}}}


id: PBO:0051894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 3","termid":"PBO:0051894"}


id: PBO:0067995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 297","termid":"PBO:0067995"}


id: MONDO:0014380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colobomatous microphthalmia-rhizomelic dysplasia syndrome is a rare, genetic developmental defect during embryogenesis characterized by a range of developmental eye anomalies (including anophthalmia, microphthalmia, colobomas, microcornea, corectopia, cataract) and symmetric limb rhizomelia with short stature and contractures of large joints. Intellectual disability with autistic features, macrocephaly, dysmorphic features, urogenital anomalies (hypospadia, cryptorchidism), cutaneous syndactyly and precocious puberty may also be present.","definition_xrefs":["Orphanet:424099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"colobomatous microphthalmia-rhizomelic dysplasia syndrome","secondary_identifiers":["GARD:17707","OMIM:615877","MEDGEN:862977","UMLS:C4014540","DOID:0111802"],"synonyms":[{"name":"MCOPS14","type":"related"},{"name":"MCSKS","type":"related"},{"name":"microphthalmia and coloboma, with or without rhizomelic skeletal dysplasia","type":"related"},{"name":"microphthalmia or coloboma with or without rhizomelic skeletal dysplasia","type":"related"},{"name":"microphthalmia, syndromic 14","type":"related"},{"name":"microphthalmia, syndromic type 14","type":"exact"},{"name":"microphthalmia-coloboma-rhizomelic skeletal dysplasia","type":"exact"},{"name":"microphthalmia/coloboma and skeletal dysplasia syndrome","type":"related"}],"termid":"MONDO:0014380","xrefs":{"Monarch":{"xref_id":"0014380"}}}


id: PBO:0004015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G10 protein","termid":"PBO:0004015"}


id: MONDO:0019053
data:
  {"annotated_genes":["SJAG_04823","SJAG_03781","SJAG_04146","SJAG_02788","SJAG_00326","SJAG_02997","SJAG_04763","SJAG_02848","SJAG_02693","SJAG_05950","SJAG_02384","SJAG_03440","SJAG_02619","SJAG_03324","SJAG_00891","SJAG_01165","SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013571"},{"annotations":[86631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009958"},{"annotations":[85855,85854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013726"},{"annotations":[87560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013948"},{"annotations":[87204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054549"},{"annotations":[87561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013949"},{"annotations":[87559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013950"},{"annotations":[87562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013951"},{"annotations":[87563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013952"},{"annotations":[87520,87521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013967"},{"annotations":[87167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008953"},{"annotations":[87511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011101"},{"annotations":[87156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008954"},{"annotations":[87425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008736"},{"annotations":[87543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013927"},{"annotations":[87545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013930"},{"annotations":[87546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013931"},{"annotations":[87548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013936"},{"annotations":[87550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013937"},{"annotations":[87551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013938"},{"annotations":[87549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013939"},{"annotations":[87554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013942"},{"annotations":[87552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013943"},{"annotations":[87557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013945"},{"annotations":[86628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009959"},{"annotations":[86366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008972"},{"annotations":[86215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014743"}]},"cv_name":"mondo","definition":"A group of congenital disorders of lipid metabolism, caused by loss of the normal peroxisomes. Signs and symptoms include developmental delays, intellectual disability, characteristic facial dysmorphic features, hepatomegaly, and hypotonia.","definition_xrefs":["NCIT:C85005"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_02384":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02788":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04763":null,"SJAG_04823":null,"SJAG_05950":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"peroxisomal disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:129185","Orphanet:68373","NANDO:2100166","DOID:906","NANDO:1200758","ICD9:277.86","SCTID:238059005","UMLS:C0282528","GARD:18885","icd11.foundation:782299726","ICD9:277.89"],"synonyms":[{"name":"disorder of peroxisomal function","type":"exact"},{"name":"peroxisomal disease","type":"exact"},{"name":"peroxisomal disorder","type":"exact"},{"name":"peroxisomal function disorder","type":"exact"}],"termid":"MONDO:0019053","terms_by_termid":{"MONDO:0008736":null,"MONDO:0008953":null,"MONDO:0008954":null,"MONDO:0008972":null,"MONDO:0009958":null,"MONDO:0009959":null,"MONDO:0011101":null,"MONDO:0013571":null,"MONDO:0013726":null,"MONDO:0013927":null,"MONDO:0013930":null,"MONDO:0013931":null,"MONDO:0013936":null,"MONDO:0013937":null,"MONDO:0013938":null,"MONDO:0013939":null,"MONDO:0013942":null,"MONDO:0013943":null,"MONDO:0013945":null,"MONDO:0013948":null,"MONDO:0013949":null,"MONDO:0013950":null,"MONDO:0013951":null,"MONDO:0013952":null,"MONDO:0013967":null,"MONDO:0014743":null,"MONDO:0054549":null},"xrefs":{"Monarch":{"xref_id":"0019053"}}}


id: PBO:0079752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine-cytidine kinase 1 like 1","termid":"PBO:0079752"}


id: SO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide sequence of a virus that infects bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phage_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Bacteriophage"],"synonyms":[{"name":"bacteriophage","type":"exact"},{"name":"phage","type":"exact"},{"name":"phage sequence","type":"exact"}],"termid":"SO:0001042"}


id: PBO:0038517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 2","termid":"PBO:0038517"}


id: PBO:0089428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe Mug125 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0089428"}


id: FYPO:0008193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is normal during prophase of the first meiotic nuclear division.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to pericentric heterochromatin during meiotic prophase I","termid":"FYPO:0008193"}


id: GO:0072222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric early distal convoluted tubule over time, from its formation to the mature structure. The metanephric early distal convoluted tubule contains metanephric DCT cells and is vasopressin-insensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early distal convoluted tubule development","termid":"GO:0072067"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric early distal convoluted tubule development","termid":"GO:0072222"}


id: PBO:0058666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6794","termid":"PBO:0058666"}


id: PBO:0053384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 311","termid":"PBO:0053384"}


id: PBO:0018042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic chromosome segregation protein Csi1","termid":"PBO:0018042"}


id: PR:O74971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An autophagy protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13040:SF2","PRO:DNx","OMA:SCHPO03703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.10c","secondary_identifiers":["UniProtKB:O74971"],"synonyms":[{"name":"Spom972h-ATG5","type":"exact"},{"name":"meiotically up-regulated gene 77 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74971"}


id: PBO:0078568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51B, pseudogene","termid":"PBO:0078568"}


id: GO:1900494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"regulation of acyl-CoA biosynthetic process","termid":"GO:0050812"},{"relation_name":"regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150","GO:0006790","GO:0006629"],"is_obsolete":false,"name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"}],"termid":"GO:1900494"}


id: MONDO:0003054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A grade I, slowly growing meningioma. Only a minority of tumors recur following complete resection.","definition_xrefs":["NCIT:C4055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"benign neoplasm of meninges","termid":"MONDO:0021527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign meningioma","secondary_identifiers":["MEDGEN:129095","SCTID:724171006","UMLS:C0281784","DOID:4587"],"synonyms":[{"name":"benign meningioma (WHO grade I)","type":"exact"},{"name":"meningioma (disease), benign","type":"exact"},{"name":"meningioma, benign","type":"exact"}],"termid":"MONDO:0003054","xrefs":{"Monarch":{"xref_id":"0003054"}}}


id: FYECO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at standard temperature (in the range around 25-32 degrees Celsius) followed by growth at a high temperature (above 32 degrees Celsius).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, standard to high","termid":"FYECO:0000300"}


id: PBO:0005779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein core protein (predicted)","termid":"PBO:0005779"}


id: FYPO:0000636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"},{"relation_name":"is_a","term_name":"increased cell population growth","termid":"FYPO:0003937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth rate","synonyms":[{"name":"enhanced cell population growth","type":"related"},{"name":"fast cell population growth","type":"exact"},{"name":"increased cell population growth rate during mitotic cell cycle","type":"related"},{"name":"increased cell population growth rate during vegetative growth","type":"exact"},{"name":"increased cell population proliferation","type":"related"},{"name":"increased cell proliferation","type":"related"}],"termid":"FYPO:0000636"}


id: PBO:0081495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 391","termid":"PBO:0081495"}


id: FYPO:0003271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-methionine as the sole sulfur source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0005447","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on methionine sulfur source","synonyms":[{"name":"decreased cell population growth on methionine sulphur source","type":"exact"},{"name":"decreased growth on methionine sulfur source","type":"broad"},{"name":"decreased methionine utilization","type":"related"},{"name":"decreased vegetative cell population growth on methionine sulfur source","type":"exact"},{"name":"reduced cell population growth on methionine sulfur source","type":"exact"}],"termid":"FYPO:0003271"}


id: PBO:0068343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 114","termid":"PBO:0068343"}


id: GO:0010253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-L-rhamnose, a substance composed of rhamnose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["PMID:15134748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-rhamnose metabolic process","termid":"GO:0033478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-rhamnose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3261"],"synonyms":[{"name":"UDP-rhamnose anabolism","type":"exact"},{"name":"UDP-rhamnose biosynthesis","type":"exact"},{"name":"UDP-rhamnose formation","type":"exact"},{"name":"UDP-rhamnose synthesis","type":"exact"}],"termid":"GO:0010253"}


id: PBO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CRE element","termid":"PBO:0001037"}


id: PBO:0055198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2623","termid":"PBO:0055198"}


id: GO:0043425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a basic Helix-Loop-Helix (bHLH) superfamily of transcription factors, important regulatory components in transcriptional networks of many developmental pathways.","definition_xrefs":["PMID:9144210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor binding","termid":"GO:0140297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"bHLH transcription factor binding","termid":"GO:0043425"}


id: GO:0070798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cleistothecium development","termid":"GO:0070796"},{"relation_name":"is_a","term_name":"positive regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902060"},{"relation_name":"positively_regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cleistothecium development","termid":"GO:0070798"}


id: PATO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Extremely acute and aggressive onset of a pathological process.","definition_xrefs":["PATOC:PNS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute","termid":"PATO:0000389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peracute","synonyms":[{"name":"per-acute","type":"exact"}],"termid":"PATO:0002387"}


id: GO:0042313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the inhibition or termination of the activity of protein kinase C.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"protein kinase C deactivation","synonyms":[{"name":"PKC deactivation","type":"exact"}],"termid":"GO:0042313"}


id: FYPO:0003932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an exonucleolytic RNA catabolic process that proceeds in the 5' to 3' direction to degrade mRNA encoded in the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0034428","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear mRNA catabolic process","termid":"FYPO:0002939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process","synonyms":[{"name":"normal 5'-3' exonucleolytic nuclear-transcribed mRNA catabolic process","type":"exact"},{"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process during vegetative growth","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3'","type":"exact"}],"termid":"FYPO:0003932"}


id: PBO:0080561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP11 pseudogene 1","termid":"PBO:0080561"}


id: PBO:0063320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piccolo presynaptic cytomatrix protein","termid":"PBO:0063320"}


id: PBO:0001731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl-tRNA formyltransferase Fmt1 (predicted)","termid":"PBO:0001731"}


id: MONDO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spherocytosis (obsolete MONDO:0000094)","secondary_identifiers":["HP:0004444"],"synonyms":[{"name":"obsolete spherocytosis (disease)","type":"exact"},{"name":"spherocytosis","type":"exact"}],"termid":"MONDO:0000094","xrefs":{"Monarch":{"xref_id":"0000094"}}}


id: GO:0100053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sulfate assimilation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfate assimilation by transcription from RNA polymerase II promoter (obsolete GO:0100053)","termid":"GO:0100053"}


id: PBO:0085573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein interacting with Arl3p; Arl3p is a GTPase of the Ras superfamily involved in vesicle-tethering at the Golgi; putative ortholog of human SCOCO","termid":"PBO:0085573"}


id: FYPO:0003939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of m7G(5')pppN diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abnormal mRNA decapping activity","type":"related"}],"termid":"FYPO:0003939"}


id: MONDO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"phthisical cornea","secondary_identifiers":["MEDGEN:509789","SCTID:28143002","UMLS:C0155102","DOID:11793","ICD9:371.05"],"termid":"MONDO:0001368","xrefs":{"Monarch":{"xref_id":"0001368"}}}


id: FYPO:0004922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus, has no septum, is elongated, and progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate aseptate cell","termid":"FYPO:0000839"},{"relation_name":"is_a","term_name":"inviable mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0005367"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0007701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0005447","FYPO:0000005","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell arrested at G2/M","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic G2/M phase transition arrest","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic G2-phase arrested elongated inviable mononucleate aseptate vegetative cell","type":"related"},{"name":"mitotic cell cycle arrest in G2-phase with elongated inviable mononucleate aseptate cell","type":"related"}],"termid":"FYPO:0004922"}


id: PBO:0042077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC144A N-terminal pseudogene","termid":"PBO:0042077"}


id: MOD:00202
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to D-serine.","definition_xrefs":["RESID:AA0195#SER","PubMed:7973665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine","termid":"MOD:00891"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine (Ser)","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-Ser(Ser)","type":"exact"},{"name":"D-serine","type":"exact"},{"name":"MOD_RES D-serine (Ser)","type":"exact"}],"termid":"MOD:00202"}


id: GO:0046879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of hormones, substances with a specific regulatory effect on a particular organ or group of cells.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone transport","termid":"GO:0009914"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"hormone secretion","termid":"GO:0046879"}


id: PR:Q10244
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00943","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4G9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.14","secondary_identifiers":["UniProtKB:Q10244"],"synonyms":[{"name":"Spom972h-PXMP2","type":"exact"}],"termid":"PR:Q10244"}


id: GO:0033494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ferulate, (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ferulate metabolic process","synonyms":[{"name":"ferulate metabolism","type":"exact"}],"termid":"GO:0033494"}


id: MONDO:0004660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a lung.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung carcinoma in situ","secondary_identifiers":["MEDGEN:146894","SCTID:92649001","ICD9:231.2","NCIT:C27467","DOID:8800","UMLS:C0685053"],"synonyms":[{"name":"bronchial carcinoma in situ","type":"exact"},{"name":"carcinoma in situ of lung","type":"exact"},{"name":"lung in situ carcinoma","type":"exact"},{"name":"stage 0 lung cancer","type":"exact"},{"name":"stage 0 lung cancer aJCC v6","type":"exact"},{"name":"stage 0 lung cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 lung cancer aJCC v7","type":"exact"},{"name":"stage 0 lung carcinoma","type":"exact"}],"termid":"MONDO:0004660","xrefs":{"Monarch":{"xref_id":"0004660"}}}


id: PBO:0058964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 7, pseudogene","termid":"PBO:0058964"}


id: GO:0004744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-retinal = 11-cis-retinal.","definition_xrefs":["PMID:21447403"],"gene_count":0,"genotype_count":0,"name":"obsolete retinal isomerase activity (obsolete GO:0004744)","synonyms":[{"name":"all-trans-retinal 11-cis-trans-isomerase activity","type":"related"},{"name":"retinene isomerase activity","type":"related"},{"name":"retinoid isomerase activity","type":"broad"}],"termid":"GO:0004744"}


id: GO:1990625
data:
  {"annotated_genes":["SJAG_00690","SJAG_00169","SJAG_02592","SJAG_03869","SJAG_00786","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70295,75565,94690,99656,109996,115945],"is_not":false,"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of cytoplasmic translation initiation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["PMID:12242291","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation in response to stress","termid":"GO:1990611"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0002181"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990625","terms_by_termid":{"GO:1990625":null}}


id: PBO:0066090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 3","termid":"PBO:0066090"}


id: PATO:0001843
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An acidity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"acidity","termid":"PATO:0001842"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased acidity","synonyms":[{"name":"low acidity","type":"exact"}],"termid":"PATO:0001843"}


id: GO:0140603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + H+ Pi. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP hydrolysis activity (obsolete GO:0140603)","termid":"GO:0140603"}


id: GO:0010764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast migration","termid":"GO:0010762"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"negatively_regulates","term_name":"fibroblast migration","termid":"GO:0010761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast migration","synonyms":[{"name":"negative regulation of fibroblast cell migration","type":"exact"}],"termid":"GO:0010764"}


id: PBO:0083553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene DID2/YKR035W-A","termid":"PBO:0083553"}


id: PBO:0083785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in regulation of transcription; removes Spt15p (TBP) from DNA via its C-terminal ATPase activity; may have a role in ensuring that soluble TBP is available to bind TATA-less promoters; forms a complex with TBP that binds TATA DNA with high affinity but with altered specificity; the Mot1p-Spt15p-DNA ternary complex contains unbent DNA; coregulates transcription with Spt16p through assembly of preinitiation complex and organization of nucleosomes","termid":"PBO:0083785"}


id: GO:0010241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The three successive oxidations of the 4-methyl group of ent-kaurene to form ent-kaur-16-en-19-oate, kaurenoic acid. This process may be carried out entirely by the enzyme ent-kaurene oxidase.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ent-kaurene metabolic process","termid":"GO:0033331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ent-kaurene oxidation to kaurenoic acid","synonyms":[{"name":"ent-kaurene oxidation to ent-kaur-16-en-19-oate","type":"exact"},{"name":"ent-kaurene oxidation to ent-kaurenoate","type":"exact"},{"name":"ent-kaurene oxidation to kaurenoic acid by ent-kaurene oxidase","type":"exact"}],"termid":"GO:0010241"}


id: PBO:0076085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid sulfatase","termid":"PBO:0076085"}


id: PBO:0086577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion confers reduced fitness in saline","termid":"PBO:0086577"}


id: MONDO:0011391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megalencephalic leukoencephalopathy with subcortical cysts (MLC) is a form of leukodystrophy that is characterized by infantile-onset macrocephaly, often with mild neurologic signs at presentation (such as mild motor delay), which worsen with time, leading to poor ambulation, falls, ataxia, spasticity, increasing seizures and cognitive decline. Brain magnetic resonance imaging reveals diffusely abnormal and mildly swollen white matter as well as subcortical cysts in the anterior temporal and frontoparietal regions.","definition_xrefs":["Orphanet:2478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy, megalencephalic","termid":"MONDO:0000137"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts","secondary_identifiers":["DOID:0080315","MEDGEN:347006","GARD:3445","NANDO:1200950","NANDO:2200837","SCTID:703536004","UMLS:C1858854","MESH:C536141"],"synonyms":[{"name":"MLC","type":"exact"},{"name":"MLC1","type":"related"},{"name":"Vacuolating megalencephalic leukoencephalopathy with subcortical cysts","type":"exact"},{"name":"Van der Knaap syndrome","type":"exact"},{"name":"megalencephalic leukodystrophy","type":"exact"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 1","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts type 1","type":"exact"},{"name":"megalencephaly-cystic leukodystrophy","type":"related"},{"name":"megalencephaly-cystic leukodystrophy syndrome","type":"exact"}],"termid":"MONDO:0011391","xrefs":{"Monarch":{"xref_id":"0011391"}}}


id: MONDO:0007435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dentatorubral pallidoluysian atrophy (DRPLA) is a rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by involuntary movements, ataxia, epilepsy, mental disorders, cognitive decline and prominent anticipation.","definition_xrefs":["Orphanet:101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type IV","termid":"MONDO:0019794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"dentatorubral-pallidoluysian atrophy","secondary_identifiers":["NCIT:C122653","UMLS:C0751781","GARD:5643","MESH:D020191","NCIT:C7636","SCTID:267581004","ICD9:333.99","MEDGEN:155630","NANDO:1200043","OMIM:125370","SCTID:68116008","DOID:0060162"],"synonyms":[{"name":"DRPLA","type":"exact"},{"name":"Dentatorubropallidoluysian atrophy","type":"exact"},{"name":"NOD","type":"related"},{"name":"Naito Oyanagi disease","type":"related"},{"name":"Naito-Oyanagi disease","type":"exact"},{"name":"ataxia, chorea, seizures, and dementia","type":"related"},{"name":"dentatorubral pallidoluysian atrophy","type":"related"},{"name":"dentatorubral-pallidoluysian atrophy","type":"exact"},{"name":"haw River syndrome","type":"exact"},{"name":"myoclonic epilepsy with choreoathetosis","type":"related"}],"termid":"MONDO:0007435","xrefs":{"Monarch":{"xref_id":"0007435"}}}


id: FYPO:0008120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the SAGA complex is lower than normal.","definition_xrefs":["PMID:31748520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level in SAGA complex","termid":"FYPO:0008120"}


id: PBO:0068266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 2C, pseudogene","termid":"PBO:0068266"}


id: PBO:0054007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1337","termid":"PBO:0054007"}


id: GO:0006434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. The seryl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a serine-accetping tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"seryl-tRNA aminoacylation","termid":"GO:0006434"}


id: PBO:0046489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS2 repressor factor","termid":"PBO:0046489"}


id: GO:0009635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a herbicide stimulus. Herbicides are chemicals used to kill or control the growth of plants.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbicide","synonyms":[{"name":"herbicide susceptibility/resistance","type":"related"}],"termid":"GO:0009635"}


id: PBO:0042293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD3 gamma subunit of T-cell receptor complex","termid":"PBO:0042293"}


id: MONDO:1010142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyoderma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoderma, non-human animal","secondary_identifiers":["OMIA:001877"],"termid":"MONDO:1010142","xrefs":{"Monarch":{"xref_id":"1010142"}}}


id: FYPO:0007556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diethylstilbestrol. Cells stop growing (and may die) at a concentration of diethylstilbestrol that allows wild type cells to grow.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to diethylstilbestrol","synonyms":[{"name":"hypersensitive to diethylstilbestrol","type":"exact"},{"name":"sensitive to DES","type":"exact"},{"name":"sensitive to diethylstilbestrol during mitotic cell cycle","type":"related"},{"name":"sensitive to diethylstilbestrol during vegetative growth","type":"exact"}],"termid":"FYPO:0007556"}


id: PBO:0053933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1232","termid":"PBO:0053933"}


id: PBO:0085039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonessential component of the TIM23 complex; interacts with the Translocase of the Outer Mitochondrial membrane (TOM complex) and with respiratory enzymes; may regulate the Translocase of the Inner Mitochondrial membrane (TIM23 complex) activity","termid":"PBO:0085039"}


id: GO:0050419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxymandelonitrile = 4-hydroxybenzaldehyde + hydrocyanate.","definition_xrefs":["RHEA:15977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"hydroxymandelonitrile lyase activity","secondary_identifiers":["EC:4.1.2.11","MetaCyc:HYDROXYMANDELONITRILE-LYASE-RXN"],"synonyms":[{"name":"(S)-4-hydroxymandelonitrile 4-hydroxybenzaldehyde-lyase (cyanide-forming)","type":"related"},{"name":"(S)-4-hydroxymandelonitrile hydroxybenzaldehyde-lyase activity","type":"related"},{"name":"hydroxynitrile lyase activity","type":"broad"},{"name":"sorghum hydroxynitrile lyase activity","type":"related"}],"termid":"GO:0050419"}


id: PBO:0040200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 13","termid":"PBO:0040200"}


id: PBO:0066374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 1","termid":"PBO:0066374"}


id: PBO:0056275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1C member 1","termid":"PBO:0056275"}


id: MONDO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete salt and pepper syndrome (obsolete MONDO:0018275)","termid":"MONDO:0018275","xrefs":{"Monarch":{"xref_id":"0018275"}}}


id: GO:1904894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor signaling pathway via STAT.","definition_xrefs":["PMID:24587195","GO_REF:0000058","GOC:TermGenie","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via STAT","termid":"GO:1904892"},{"relation_name":"positively_regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor signaling pathway via STAT","secondary_identifiers":["Reactome:R-HSA-9027283"],"synonyms":[{"name":"activation of STAT cascade","type":"narrow"},{"name":"activation of STAT signalling pathway","type":"narrow"},{"name":"activation of kinase activated-STAT cascade","type":"narrow"},{"name":"activation of kinase-STAT cascade","type":"narrow"},{"name":"positive regulation of STAT signalling pathway","type":"exact"},{"name":"positive regulation of kinase activated-STAT cascade","type":"exact"},{"name":"positive regulation of kinase-STAT cascade","type":"exact"},{"name":"up regulation of STAT cascade","type":"exact"},{"name":"up regulation of STAT signalling pathway","type":"exact"},{"name":"up regulation of kinase activated-STAT cascade","type":"exact"},{"name":"up regulation of kinase-STAT cascade","type":"exact"},{"name":"up-regulation of STAT cascade","type":"exact"},{"name":"up-regulation of STAT signalling pathway","type":"exact"},{"name":"up-regulation of kinase activated-STAT cascade","type":"exact"},{"name":"up-regulation of kinase-STAT cascade","type":"exact"},{"name":"upregulation of STAT cascade","type":"exact"},{"name":"upregulation of STAT signalling pathway","type":"exact"},{"name":"upregulation of kinase activated-STAT cascade","type":"exact"},{"name":"upregulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904894"}


id: MONDO:0007879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital malformation of the larynx in which there is failure of recanalization of the laryngotracheal tube during gestation.","definition_xrefs":["NCIT:C98972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"larynx atresia","secondary_identifiers":["ICD9:748.3","NANDO:2200190","Orphanet:1202","OMIM:150300","UMLS:C0265756","GARD:3194","MESH:C563637","SCTID:64981002","MEDGEN:78572"],"synonyms":[{"name":"congenital atresia of larynx","type":"exact"},{"name":"congenital atresia of the larynx","type":"exact"},{"name":"congenital partial atresia of the larynx","type":"related"},{"name":"laryngeal atresia","type":"exact"},{"name":"larynx, congenital partial atresia OF","type":"related"}],"termid":"MONDO:0007879","xrefs":{"Monarch":{"xref_id":"0007879"}}}


id: PBO:0052454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 5","termid":"PBO:0052454"}


id: PBO:0080038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 24","termid":"PBO:0080038"}


id: PBO:0034394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_causally_upstream_of","termid":"PBO:0034394"}


id: PBO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended Fer/CIP4 (EFC) domain protein Cdc15","termid":"PBO:0000954"}


id: PBO:0052735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 27","termid":"PBO:0052735"}


id: PBO:0050466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HORMAD2 and MTMR3 antisense RNA 1","termid":"PBO:0050466"}


id: PBO:0051303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-43","termid":"PBO:0051303"}


id: PBO:0050427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H3 pseudogene 1","termid":"PBO:0050427"}


id: PATO:0000811
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000811 visual value (obsolete PATO:0000811)","termid":"PATO:0000811"}


id: GO:1902545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA N-glycosylase activity.","definition_xrefs":["GOC:TermGenie","PMID:15518571","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA N-glycosylase activity (obsolete GO:1902545)","synonyms":[{"name":"down regulation of DNA N-glycosylase activity","type":"exact"},{"name":"down regulation of DNA glycosylase activity","type":"exact"},{"name":"down regulation of endonuclease VIII activity","type":"related"},{"name":"down-regulation of DNA N-glycosylase activity","type":"exact"},{"name":"down-regulation of DNA glycosylase activity","type":"exact"},{"name":"down-regulation of endonuclease VIII activity","type":"related"},{"name":"downregulation of DNA N-glycosylase activity","type":"exact"},{"name":"downregulation of DNA glycosylase activity","type":"exact"},{"name":"downregulation of endonuclease VIII activity","type":"related"},{"name":"inhibition of DNA N-glycosylase activity","type":"narrow"},{"name":"inhibition of DNA glycosylase activity","type":"narrow"},{"name":"inhibition of endonuclease VIII activity","type":"related"},{"name":"negative regulation of DNA glycosylase activity","type":"exact"},{"name":"negative regulation of endonuclease VIII activity","type":"related"}],"termid":"GO:1902545"}


id: FYPO:0004198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein degradation during mitosis","synonyms":[{"name":"decreased protein breakdown during mitosis","type":"exact"},{"name":"decreased protein catabolic process during mitosis","type":"exact"},{"name":"decreased protein catabolism during mitosis","type":"exact"},{"name":"decreased protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein degradation during mitotic M phase","type":"related"},{"name":"decreased protein degradation during mitotic nuclear division","type":"exact"},{"name":"reduced protein degradation during mitosis","type":"exact"}],"termid":"FYPO:0004198"}


id: GO:0047034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + (15S)-15-hydroxy-5,8,11-cis-13-trans-icosatetraenoate = NAD(P)H + H+ + 15-oxo-5,8,11-cis-13-trans-icosatetraenoate.","definition_xrefs":["MetaCyc:1.1.1.232-RXN","EC:1.1.1.232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"15-hydroxyicosatetraenoate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161789"],"synonyms":[{"name":"(15S)-15-hydroxy-5,8,11-cis-13-trans-icosatetraenoate:NAD(P)+ 15-oxidoreductase activity","type":"related"},{"name":"15-hydroxyeicosatetraenoate dehydrogenase activity","type":"related"}],"termid":"GO:0047034"}


id: CHEBI:26981
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threitol","termid":"CHEBI:26981"}


id: GO:0140054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that specifically binds either to an unmodified histone H2A or a form modified by a post-translational modification on a specific residue. The most common PTMs on histones are methylation, acetylation and phosphorylation.","definition_xrefs":["PMID:25688442","PMID:11498575","PMID:31082667","PMID:34726351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone reader activity","termid":"GO:0140566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0140566","GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"histone H2A reader activity","synonyms":[{"name":"histone H2A reader","type":"exact"}],"termid":"GO:0140054"}


id: PBO:0088562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase DHRS3 family, implicated in lipid (isoprenoid) metabolism","termid":"PBO:0088562"}


id: MONDO:0009256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive or inappropriate lactation in females or males, and not necessarily related to pregnancy. Galactorrhea can occur either unilaterally or bilaterally, and be profuse or sparse. Its most common cause is hyperprolactinemia.","definition_xrefs":["MESH:D005687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactation disease","termid":"MONDO:0045019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactorrhea","secondary_identifiers":["NCIT:C113343","SCTID:78622004","UMLS:C3665358","MEDGEN:777088","HP:0100829","ICD9:611.6"],"synonyms":[{"name":"galactorrhea","type":"exact"},{"name":"galactorrhea (disease)","type":"exact"}],"termid":"MONDO:0009256","xrefs":{"Monarch":{"xref_id":"0009256"}}}


id: PBO:0046094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 5","termid":"PBO:0046094"}


id: GO:1990069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of opening of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange.","definition_xrefs":["PMID:21749899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal opening","termid":"GO:1990069"}


id: GO:0033590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalamin (vitamin B12) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cobalamin","synonyms":[{"name":"response to vitamin B12","type":"exact"}],"termid":"GO:0033590"}


id: PBO:0089311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid8","termid":"PBO:0089311"}


id: MONDO:0009272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"German syndrome is an autosomal recessive arthrogryposis syndrome, described in 5 cases. Three of the four known families with affected children were Ashkenazi Jews. German syndrome is characterized by arthrogryposis, hypotonia-hypokinesia sequence, and lymphedema. Patients present distinct craniofacial appearance (tall forehead and ''carp''-shaped mouth, cleft palate), contractures, severe hypotonia manifesting as motor delay, and swallowing difficulties. The disease has a severe morbidity and mortality rate and survivors present a small stature, hypotonia, frequent upper respiratory infections, and psychomotor delay. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:2077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"fetal trimethadione syndrome","termid":"MONDO:0016009"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"German syndrome","secondary_identifiers":["OMIM:231080","SCTID:733037000","UMLS:C3887495","GARD:2462","MEDGEN:854357","MESH:C562543"],"synonyms":[{"name":"German syndrome","type":"exact"}],"termid":"MONDO:0009272","xrefs":{"Monarch":{"xref_id":"0009272"}}}


id: FYPO:0008297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ergosta- 5,7,24(28)-trienol  measured in a cell is higher than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular ergosta-5,7,24(28)-trienol level","termid":"FYPO:0008297"}


id: FYPO:0003363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cytogamy does not occur. Cytogamy is the process that creates a single cell from two cells of complementary mating types.","definition_xrefs":["PomBase:mah","GO:0000755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished cytogamy","synonyms":[{"name":"conjugation without cellular fusion during mating","type":"related"},{"name":"cytogamy abolished","type":"exact"}],"termid":"FYPO:0003363"}


id: GO:1990137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RH + ROOH = ROH + ROH.","definition_xrefs":["PMID:19467604","EC:1.11.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"plant seed peroxygenase activity","secondary_identifiers":["MetaCyc:RXN-11819"],"synonyms":[{"name":"peroxygenase activity","type":"broad"},{"name":"plant seed peroxidase activity","type":"related"}],"termid":"GO:1990137"}


id: MONDO:0004827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplasm arising from the distal third of the esophagus. Morphologically, it is characterized by the presence of fibrovascular cores covered by mature stratified squamous epithelium. Progression to squamous cell carcinoma is extremely rare.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"},{"relation_name":"is_a","term_name":"benign neoplasm of esophagus","termid":"MONDO:0021459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophagus squamous cell papilloma","secondary_identifiers":["DOID:959","MEDGEN:272592","UMLS:C1333467","NCIT:C5344"],"synonyms":[{"name":"esophageal squamous papilloma","type":"exact"},{"name":"esophagus squamous cell papilloma","type":"exact"},{"name":"esophagus squamous papilloma","type":"exact"},{"name":"oesophagus squamous papilloma","type":"exact"},{"name":"squamous cell papilloma of esophagus","type":"exact"},{"name":"squamous cell papilloma of oesophagus","type":"exact"},{"name":"squamous cell papilloma of the esophagus","type":"exact"},{"name":"squamous cell papilloma of the oesophagus","type":"exact"}],"termid":"MONDO:0004827","xrefs":{"Monarch":{"xref_id":"0004827"}}}


id: MONDO:0005666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete berylliosis (obsolete MONDO:0005666)","termid":"MONDO:0005666","xrefs":{"Monarch":{"xref_id":"0005666"}}}


id: PBO:0059380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 5","termid":"PBO:0059380"}


id: GO:0043063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the intracellular bridge. An intracellular bridge is a direct link between the cytoplasms of sister cells that allows cells to communicate with one another.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular structure organization","termid":"GO:0043062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intercellular bridge organization","synonyms":[{"name":"intercellular bridge organisation","type":"exact"},{"name":"intercellular bridge organization and biogenesis","type":"related"}],"termid":"GO:0043063"}


id: MONDO:0010596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary membranoproliferative glomerulonephritis","termid":"MONDO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"membranoproliferative glomerulonephritis, X-linked","secondary_identifiers":["OMIM:305800","MESH:C564423","UMLS:C1844501","MEDGEN:336706"],"synonyms":[{"name":"Mesangiocapillary glomerulonephritis, X-linked","type":"related"},{"name":"membranoproliferative glomerulonephritis, X-linked","type":"exact"}],"termid":"MONDO:0010596","xrefs":{"Monarch":{"xref_id":"0010596"}}}


id: PBO:0073266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 10","termid":"PBO:0073266"}


id: PBO:0004814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis factor recycling AAA family ATPase (predicted)","termid":"PBO:0004814"}


id: MONDO:0003158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating malignant tumor characterized by the presence of atypical cells with myoepithelial differentiation. Representative examples include malignant breast myoepithelioma and salivary gland myoepithelial carcinoma.","definition_xrefs":["NCIT:C7596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoepithelial tumor","termid":"MONDO:0002380"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant myoepithelioma","secondary_identifiers":["ICDO:8982/3","MEDGEN:90822","ONCOTREE:STMYEC","UMLS:C0334699","DOID:4838"],"synonyms":[{"name":"malignant myoepithelioma","type":"exact"},{"name":"myoepithelial carcinoma","type":"exact"},{"name":"myoepithelioma carcinoma","type":"related"},{"name":"myoepithelioma, malignant","type":"exact"},{"name":"soft tissue myoepithelial carcinoma","type":"related"}],"termid":"MONDO:0003158","xrefs":{"Monarch":{"xref_id":"0003158"}}}


id: GO:0019374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"galactolipid metabolic process","synonyms":[{"name":"galactolipid metabolism","type":"exact"}],"termid":"GO:0019374"}


id: PBO:0078557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 45","termid":"PBO:0078557"}


id: GO:1990579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of a peptidyl-serine to form peptidyl-O-phospho-L-serine on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["PMID:21317875","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine autophosphorylation","termid":"GO:0036289"},{"relation_name":"is_a","term_name":"protein trans-autophosphorylation","termid":"GO:0036290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine trans-autophosphorylation","synonyms":[{"name":"serine autophosphorylation in trans","type":"exact"},{"name":"serine transautophosphorylation","type":"exact"}],"termid":"GO:1990579"}


id: MONDO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Schistosoma intercalatum.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schistosomiasis","termid":"MONDO:0015254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schistosoma intercalatum infectious disease","secondary_identifiers":["SCTID:52179003","ICD9:120.8","MEDGEN:124448","UMLS:C0276932","NCIT:C35364"],"synonyms":[{"name":"Schistosoma intercalatum caused disease or disorder","type":"exact"},{"name":"Schistosoma intercalatum disease or disorder","type":"exact"},{"name":"infection by Schistosoma intercalatum","type":"exact"},{"name":"infection caused by Schistosoma intercalatum","type":"related"}],"termid":"MONDO:0044351","xrefs":{"Monarch":{"xref_id":"0044351"}}}


id: MONDO:0009519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multifocal, multisystem form of Langerhans-cell histiocytosis. There is involvement of multiple organ systems including the bones, skin, liver, spleen, and lymph nodes. Patients are usually infants presenting with fever, hepatosplenomegaly, lymphadenopathy, bone and skin lesions, and pancytopenia.","definition_xrefs":["NCIT:C3160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis specific to childhood","termid":"MONDO:0017025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"letterer-Siwe disease","secondary_identifiers":["Orphanet:99870","MedDRA:10024265","icd11.foundation:1827474596","UMLS:C0023381","ICDO:9754/3","OMIM:246400","MEDGEN:7311"],"synonyms":[{"name":"L-S disease","type":"related"},{"name":"acute and disseminated Langerhans cell histiocytosis","type":"exact"},{"name":"acute disseminated Langerhans cell histiocytosis","type":"exact"},{"name":"histiocytosis X, acute disseminated","type":"related"},{"name":"letterer-Siwe disease","type":"exact"},{"name":"multifocal multisystem Langerhans cell histiocytosis","type":"exact"}],"termid":"MONDO:0009519","xrefs":{"Monarch":{"xref_id":"0009519"}}}


id: GO:0017186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptidyl-pyroglutamic acid, catalyzed by glutaminyl-peptide cyclotransferase.","definition_xrefs":["RESID:AA0031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamine modification","termid":"GO:0018199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase","synonyms":[{"name":"2-pyrrolidone-5-carboxylic acid biosynthesis","type":"exact"},{"name":"2-pyrrolidone-5-carboxylic acid biosynthetic process","type":"exact"},{"name":"peptidyl-pyroglutamic acid anabolism, using glutaminyl-peptide cyclotransferase","type":"exact"},{"name":"peptidyl-pyroglutamic acid formation, using glutaminyl-peptide cyclotransferase","type":"exact"},{"name":"peptidyl-pyroglutamic acid synthesis, using glutaminyl-peptide cyclotransferase","type":"exact"}],"termid":"GO:0017186"}


id: PBO:0071589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 6","termid":"PBO:0071589"}


id: GO:1901210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac chamber formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"cardiac chamber formation","termid":"GO:0003207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac chamber formation","synonyms":[{"name":"regulation of heart chamber formation","type":"exact"}],"termid":"GO:1901210"}


id: PBO:0047099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM151A pseudogene 1","termid":"PBO:0047099"}


id: PBO:0067147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 197, pseudogene","termid":"PBO:0067147"}


id: GO:0046607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the centrosome cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome cycle","termid":"GO:0046605"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of centrosome cycle","synonyms":[{"name":"activation of centrosome cycle","type":"narrow"},{"name":"stimulation of centrosome cycle","type":"narrow"},{"name":"up regulation of centrosome cycle","type":"exact"},{"name":"up-regulation of centrosome cycle","type":"exact"},{"name":"upregulation of centrosome cycle","type":"exact"}],"termid":"GO:0046607"}


id: MONDO:0013371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PSEN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1U","secondary_identifiers":["DOID:0110455","GARD:15689","MESH:C566296","MEDGEN:463620","OMIM:613694","UMLS:C3160720"],"synonyms":[{"name":"CMD1U","type":"exact"},{"name":"PSEN1 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1U","type":"related"},{"name":"cardiomyopathy, dilated, type 1U","type":"exact"},{"name":"dilated cardiomyopathy type 1U","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PSEN1","type":"exact"}],"termid":"MONDO:0013371","xrefs":{"Monarch":{"xref_id":"0013371"}}}


id: GO:0000705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first division of meiosis in which homologous chromosomes are paired and segregated from each other, occurring in the constitutive absence of chiasmata.","definition_xrefs":["GOC:sart","PMID:10690419","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"achiasmate meiosis I","synonyms":[{"name":"achiasmate meiosis I nuclear division","type":"exact"}],"termid":"GO:0000705"}


id: PATO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light orange","termid":"PATO:0001255"}


id: PBO:0049800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex P5B","termid":"PBO:0049800"}


id: PBO:0027615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_following_normal_mitosis","termid":"PBO:0027615"}


id: FYECO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiolutin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiolutin","termid":"FYECO:0000373"}


id: MONDO:0006881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the eye tissues posterior to the orbital septum, and generally secondary to an infection spread from adjacent sinuses. Signs and symptoms of the affected eye include sudden loss of vision, erythema, edema, decreased eye movement, and pain. Treatment is conducted via intravenous antibiotics, observation, and surgical intervention when necessary.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute orbital inflammation","termid":"MONDO:0001230"},{"relation_name":"is_a","term_name":"cellulitis","termid":"MONDO:0005230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"orbital cellulitis","secondary_identifiers":["EFO:1001076","DOID:11234","MedDRA:10031036","MESH:D054517","UMLS:C0149507","ICD9:376.01","icd11.foundation:1330743591","SCTID:194005002","NCIT:C99000","MEDGEN:57681"],"synonyms":[{"name":"orbital cellulitis","type":"exact"}],"termid":"MONDO:0006881","xrefs":{"Monarch":{"xref_id":"0006881"}}}


id: MONDO:1010228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dandy-Walker syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dandy-Walker syndrome, non-human animal","secondary_identifiers":["OMIA:000258"],"termid":"MONDO:1010228","xrefs":{"Monarch":{"xref_id":"1010228"}}}


id: SO:0002115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript supported by EST and/or mRNA evidence that aligns unambiguously to the pseudogene locus; has retained intronic sequence compared to a reference transcript sequence.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_transcript_with_retained_intron","synonyms":[{"name":"pseudogene retained intron","type":"exact"}],"termid":"SO:0002115"}


id: PBO:0090114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase Inp53","termid":"PBO:0090114"}


id: PBO:0075328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 1","termid":"PBO:0075328"}


id: PBO:0030201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_mitotic_cell_cycle_arrest_in_interphase","termid":"PBO:0030201"}


id: PBO:0081409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 257","termid":"PBO:0081409"}


id: GO:0048082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of the adult pattern of pigmentation in the cuticle of an organism.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cuticle pigmentation","termid":"GO:0048079"},{"relation_name":"regulates","term_name":"adult chitin-containing cuticle pigmentation","termid":"GO:0048085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adult chitin-containing cuticle pigmentation","termid":"GO:0048082"}


id: GO:1900752
data:
  {"annotated_genes":["SJAG_00671","SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098715"},{"annotations":[65011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901553"}]},"cv_name":"biological_process","definition":"The directed movement of a malonic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","PMID:9128730","PMID:9573154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"malonic acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"C3H4O4 transport","type":"related"},{"name":"H2malo transport","type":"related"},{"name":"HOOC-CH2-COOH transport","type":"related"},{"name":"propanedioic acid transport","type":"exact"}],"termid":"GO:1900752","terms_by_termid":{"GO:0098715":null,"GO:1901553":null}}


id: GO:1900739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway (obsolete GO:1900739)","synonyms":[{"name":"regulation of insertion of proteins into mitochondrial membranes during the induction of apoptosis","type":"narrow"},{"name":"regulation of protein insertion into mitochondrial membrane during induction of apoptosis","type":"narrow"},{"name":"regulation of protein insertion into mitochondrial membrane involved in induction of apoptosis","type":"narrow"},{"name":"regulation of protein insertion into mitochondrion membrane during induction of apoptosis","type":"narrow"}],"termid":"GO:1900739"}


