# terms

id: PBO:0005178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase Tdp1","termid":"PBO:0005178"}


id: GO:0051205
data:
  {"annotated_genes":["SJAG_01782","SJAG_01223","SJAG_01178","SJAG_00064","SJAG_01240","SJAG_02065","SJAG_00959","SJAG_02208","SJAG_03865","SJAG_02914","SJAG_02437","SJAG_04294","SJAG_02330","SJAG_00277","SJAG_00603","SJAG_01127","SJAG_04684","SJAG_01999","SJAG_03633","SJAG_03315","SJAG_05302","SJAG_03930","SJAG_05414","SJAG_05300","SJAG_01405","SJAG_01940","SJAG_01917"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98684,109661,112584,114720,106497,103831,108632,95158,114168,98915,104801,108721,101514,68248,105107,98373,110729,91990,71765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045048"},{"annotations":[78830,74770,78620,58335,78879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[114458,73176,75381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a biological membrane. Incorporation in this context means having some part or covalently attached group that is inserted into the the hydrophobic region of one or both bilayers.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"part_of","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00277":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01127":null,"SJAG_01178":null,"SJAG_01223":null,"SJAG_01240":null,"SJAG_01405":null,"SJAG_01782":null,"SJAG_01917":null,"SJAG_01940":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02437":null,"SJAG_02914":null,"SJAG_03315":null,"SJAG_03633":null,"SJAG_03865":null,"SJAG_03930":null,"SJAG_04294":null,"SJAG_04684":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"protein insertion into membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"integral membrane protein localization","type":"exact"},{"name":"integral membrane protein positioning","type":"exact"},{"name":"membrane protein localization","type":"exact"},{"name":"membrane protein positioning","type":"exact"},{"name":"protein-membrane insertion","type":"exact"}],"termid":"GO:0051205","terms_by_termid":{"GO:0032979":null,"GO:0045048":null,"GO:0071816":null}}


id: MONDO:0001371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nutritional deficit that is caused by inadequate protein or calorie intake.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-energy malnutrition","secondary_identifiers":["UMLS:C0033677","DOID:11801","MEDGEN:19521","NCIT:C34952","EFO:0009563","ICD9:269.8","ICD9:263.8","ICD9:263.9","MESH:D011502","SCTID:238107002"],"synonyms":[{"name":"Protein energy malnutrition","type":"exact"}],"termid":"MONDO:0001371","xrefs":{"Monarch":{"xref_id":"0001371"}}}


id: GO:0102155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-sulfonatolactate + NAD = 3-sulfonatopyruvate(2-) + NADH + H+.","definition_xrefs":["GOC:pz","EC:1.1.1.310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"S-sulfolactate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-11689","RHEA:28194"],"termid":"GO:0102155"}


id: GO:0002769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of a natural killer cell capable of inhibiting an immune effector process contributing to an immune response.","definition_xrefs":["ISBN:0781735149","PMID:15771571","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"natural killer cell inhibitory signaling pathway","synonyms":[{"name":"Ly49 inhibitory receptor signaling pathway","type":"related"},{"name":"NK cell inhibitory signaling pathway","type":"exact"},{"name":"inhibitory KIR signaling pathway","type":"narrow"},{"name":"killer cell inhibitory receptor signaling pathway","type":"narrow"},{"name":"natural killer cell inhibitory signalling pathway","type":"exact"}],"termid":"GO:0002769"}


id: PBO:0027858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitotic_S_phase_during_cellular_response_to_DNA_damage","termid":"PBO:0027858"}


id: FYPO:0003082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal genetic imprinting at mating-type locus","synonyms":[{"name":"normal genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"normal genetic imprinting at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0003082"}


id: PBO:0052298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDRBS2 3'UTR overlapping transcript 1","termid":"PBO:0052298"}


id: PBO:0089601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR2-SEACAT complex WD repeat subunit Seh1","termid":"PBO:0089601"}


id: GO:1902369
data:
  {"annotated_genes":["SJAG_02370","SJAG_02573","SJAG_03696","SJAG_03283","SJAG_03883","SJAG_00797","SJAG_04586","SJAG_01331","SJAG_04946","SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72441],"is_not":false,"summary":null,"term":"GO:1902369"},{"annotations":[100418,79060,79123,90516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[71022,89809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[90109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[91993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"},{"annotations":[90962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA catabolic process.","definition_xrefs":["PMID:16640457","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"negatively_regulates","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01331":null,"SJAG_02370":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04586":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA breakdown","type":"exact"},{"name":"down regulation of RNA catabolic process","type":"exact"},{"name":"down regulation of RNA catabolism","type":"exact"},{"name":"down regulation of RNA degradation","type":"exact"},{"name":"down-regulation of RNA breakdown","type":"exact"},{"name":"down-regulation of RNA catabolic process","type":"exact"},{"name":"down-regulation of RNA catabolism","type":"exact"},{"name":"down-regulation of RNA degradation","type":"exact"},{"name":"downregulation of RNA breakdown","type":"exact"},{"name":"downregulation of RNA catabolic process","type":"exact"},{"name":"downregulation of RNA catabolism","type":"exact"},{"name":"downregulation of RNA degradation","type":"exact"},{"name":"inhibition of RNA breakdown","type":"narrow"},{"name":"inhibition of RNA catabolic process","type":"narrow"},{"name":"inhibition of RNA catabolism","type":"narrow"},{"name":"inhibition of RNA degradation","type":"narrow"},{"name":"negative regulation of RNA breakdown","type":"exact"},{"name":"negative regulation of RNA catabolism","type":"exact"},{"name":"negative regulation of RNA degradation","type":"exact"}],"termid":"GO:1902369","terms_by_termid":{"GO:0048255":null,"GO:0060212":null,"GO:0070935":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null}}


id: MONDO:0054588
data:
  {"annotated_genes":["SJAG_03126","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85839,85840],"is_not":false,"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome-like disorder with loose anagen hair","termid":"MONDO:0011899"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome-like disorder with loose anagen hair 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1376945","NCIT:C176940","OMIM:617506","UMLS:C4479577","DOID:0080693"],"synonyms":[{"name":"NSLH2","type":"related"},{"name":"Noonan syndrome-like disorder with loose anagen hair 2","type":"exact"}],"termid":"MONDO:0054588","terms_by_termid":{"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0054588"}}}


id: GO:1903086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["PMID:11080161","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of sinapate ester biosynthetic process","termid":"GO:1903085"},{"relation_name":"negatively_regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of sinapate ester biosynthetic process","synonyms":[{"name":"down regulation of sinapate ester anabolism","type":"exact"},{"name":"down regulation of sinapate ester biosynthesis","type":"exact"},{"name":"down regulation of sinapate ester biosynthetic process","type":"exact"},{"name":"down regulation of sinapate ester formation","type":"exact"},{"name":"down regulation of sinapate ester synthesis","type":"exact"},{"name":"down-regulation of sinapate ester anabolism","type":"exact"},{"name":"down-regulation of sinapate ester biosynthesis","type":"exact"},{"name":"down-regulation of sinapate ester biosynthetic process","type":"exact"},{"name":"down-regulation of sinapate ester formation","type":"exact"},{"name":"down-regulation of sinapate ester synthesis","type":"exact"},{"name":"downregulation of sinapate ester anabolism","type":"exact"},{"name":"downregulation of sinapate ester biosynthesis","type":"exact"},{"name":"downregulation of sinapate ester biosynthetic process","type":"exact"},{"name":"downregulation of sinapate ester formation","type":"exact"},{"name":"downregulation of sinapate ester synthesis","type":"exact"},{"name":"inhibition of sinapate ester anabolism","type":"narrow"},{"name":"inhibition of sinapate ester biosynthesis","type":"narrow"},{"name":"inhibition of sinapate ester biosynthetic process","type":"narrow"},{"name":"inhibition of sinapate ester formation","type":"narrow"},{"name":"inhibition of sinapate ester synthesis","type":"narrow"},{"name":"negative regulation of sinapate ester anabolism","type":"exact"},{"name":"negative regulation of sinapate ester biosynthesis","type":"exact"},{"name":"negative regulation of sinapate ester formation","type":"exact"},{"name":"negative regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903086"}


id: PR:P87236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug154 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 154 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.11","synonyms":[{"name":"Spom972h-mug154","type":"exact"}],"termid":"PR:P87236"}


id: GO:1900892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pentadecane metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of pentadecane metabolic process","termid":"GO:1900890"},{"relation_name":"positively_regulates","term_name":"pentadecane metabolic process","termid":"GO:1900633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pentadecane metabolic process","synonyms":[{"name":"activation of pentadecane metabolic process","type":"narrow"},{"name":"activation of pentadecane metabolism","type":"narrow"},{"name":"positive regulation of pentadecane metabolism","type":"related"},{"name":"up regulation of pentadecane metabolic process","type":"exact"},{"name":"up regulation of pentadecane metabolism","type":"related"},{"name":"up-regulation of pentadecane metabolic process","type":"exact"},{"name":"up-regulation of pentadecane metabolism","type":"related"},{"name":"upregulation of pentadecane metabolic process","type":"exact"},{"name":"upregulation of pentadecane metabolism","type":"related"}],"termid":"GO:1900892"}


id: PATO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000776 memory value (obsolete PATO:0000776)","termid":"PATO:0000776"}


id: PBO:0088205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn2+-dependent endopolyphosphatase; required with PPN1 to mobilize polyphosphate stores in response to phosphate starvation; member of the PPP-superfamily of metalloproteases; localizes to the vacuolar lumen via the MVB pathway; null mutant is highly sensitive to azaserine and resistant to sodium-O-vandate","termid":"PBO:0088205"}


id: MONDO:0003140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the glomeruli characterized by the accumulation of antibody-antigen immune complexes, resulting in glomerular damage and impaired kidney function.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"immune-complex glomerulonephritis","secondary_identifiers":["DOID:4784","MEDGEN:148168","NCIT:C35800","ICD9:583.89","UMLS:C0744421","SCTID:123752003"],"synonyms":[{"name":"immune Complex glomerulonephritis","type":"exact"}],"termid":"MONDO:0003140","xrefs":{"Monarch":{"xref_id":"0003140"}}}


id: PBO:0071076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 78","termid":"PBO:0071076"}


id: PBO:0079701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubinuclein 2","termid":"PBO:0079701"}


id: GO:0051858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process, either constitutive or induced, by which an organism evades, minimizes, or suppresses the effects of its symbiont organism's defense(s). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete avoidance of symbiont defenses (obsolete GO:0051858)","termid":"GO:0051858"}


id: GO:0047785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + cortisol = adenosine 3',5'-diphosphate + cortisol 21-sulfate + H+.","definition_xrefs":["RHEA:11884","EC:2.8.2.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"cortisol sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R02839","MetaCyc:CORTISOL-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:cortisol 21-sulfotransferase activity","type":"related"},{"name":"cortisol sulphotransferase activity","type":"exact"},{"name":"glucocorticoid sulfotransferase activity","type":"related"},{"name":"glucocorticosteroid sulfotransferase activity","type":"broad"}],"termid":"GO:0047785"}


id: PBO:0073638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 25, pseudogene","termid":"PBO:0073638"}


id: PBO:0017581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-UTP complex subunit Utp8 (predicted)","termid":"PBO:0017581"}


id: PBO:0054452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1849","termid":"PBO:0054452"}


id: PBO:0064437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase 1 pseudogene 2","termid":"PBO:0064437"}


id: MOD:02004
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydroxy hydrogen atom of L-threonine with an acyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O3-acylated L-threonine","termid":"MOD:02004"}


id: PBO:0060665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDC1 transmembrane nucleoporin","termid":"PBO:0060665"}


id: MOD:00227
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to omega-N-phospho-L-arginine.","definition_xrefs":["RESID:AA0222","Unimod:21#R","PubMed:8300603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"N-phosphorylated residue","termid":"MOD:01456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"omega-N-phospho-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(N'-phosphonocarbamimidamido)pentanoic acid","type":"exact"},{"name":"(2S)-2-amino-5-([amino(phosphonoamino)methylidene]amino)pentanoic acid","type":"exact"},{"name":"MOD_RES Phosphoarginine","type":"exact"},{"name":"N(gamma)-phosphoarginine","type":"exact"},{"name":"N(omega)-phosphono-L-arginine","type":"exact"},{"name":"N5-[imino(phosphonoamino)methyl]-L-ornithine","type":"exact"},{"name":"PArg","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"alpha-amino-delta-phosphonoguanidinovaleric acid","type":"exact"},{"name":"omega-N-phospho-L-arginine","type":"exact"},{"name":"phosphoarginine","type":"exact"}],"termid":"MOD:00227"}


id: FYPO:0007043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alkaline phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"},{"relation_name":"is_a","term_name":"abnormal alkaline phosphatase activity","termid":"FYPO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished alkaline phosphatase activity","synonyms":[{"name":"alkaline phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0007043"}


id: RO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"bearer_of","termid":"RO:0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_quality","termid":"RO:0000086"}


id: PBO:0038802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM7, ADAMDEC1 and ADAM28 antisense RNA 1","termid":"PBO:0038802"}


id: GO:0070441
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the Bruton tyrosine protein kinase Btk, which is implicated in mammalian X-linked immunodeficiencies, with the beta and gamma subunits of a heterotrimeric G protein.","definition_xrefs":["GOC:mah","PMID:7972043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"G-protein beta/gamma-Btk complex","synonyms":[{"name":"G protein complex (BTK, GNG1, GNG2)","type":"related"},{"name":"G protein complex (Btk, Gng2, Gnb1)","type":"related"}],"termid":"GO:0070441"}


id: PBO:0058720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6848","termid":"PBO:0058720"}


id: GO:0019915
data:
  {"annotated_genes":["SJAG_01180","SJAG_04041","SJAG_03162","SJAG_02763","SJAG_04049","SJAG_01906","SJAG_03609","SJAG_02980","SJAG_01537","SJAG_04059"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90357,110053,119826],"is_not":false,"summary":null,"term":"GO:0019915"},{"annotations":[112394,114515,119211,94973,62413,89090,111319],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140042"}]},"cv_name":"biological_process","definition":"The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:mah","PMID:11102830","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutrient storage","termid":"GO:0170062"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01537":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid storage","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:26774782":null},"synonyms":[{"name":"lipid retention","type":"exact"},{"name":"lipid sequestering","type":"narrow"},{"name":"lipid sequestration","type":"narrow"},{"name":"retention of lipids","type":"exact"},{"name":"sequestering of lipids","type":"narrow"},{"name":"sequestration of lipid","type":"narrow"},{"name":"sequestration of lipids","type":"exact"},{"name":"storage of lipids","type":"exact"}],"termid":"GO:0019915","terms_by_termid":{"GO:0019915":null,"GO:0140042":null}}


id: SO:0001476
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid that occurs naturally.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"natural","termid":"SO:0000782"},{"relation_name":"is_a","term_name":"plasmid","termid":"SO:0000155"},{"relation_name":"is_a","term_name":"extrachromosomal_mobile_genetic_element","termid":"SO:0001038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural_plasmid","synonyms":[{"name":"natural plasmid","type":"exact"}],"termid":"SO:0001476"}


id: GO:1903053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["PMID:22357537","GOC:BHF","GOC:rl","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix organization","synonyms":[{"name":"regulation of extracellular matrix organisation","type":"exact"},{"name":"regulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903053"}


id: PBO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as gnr1 in error","termid":"PBO:0001089"}


id: GO:0017008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycobiliviolin to phycoerythrocyanin.","definition_xrefs":["RESID:AA0258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycobiliviolin linkage","termid":"GO:0017008"}


id: FYPO:0001877
data:
  {"alleles_by_uniquename":{"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119508,119509,119515],"is_not":false,"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable but has an abnormally low thickness or diameter.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"thin cell","termid":"FYPO:0001879"},{"relation_name":"is_a","term_name":"thin cell","termid":"FYPO:0001879"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":3,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"viable thin vegetative cell","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_03581","SJAG_04280","SJAG_03048"],"single_locus_genotype_uniquenames":["gef1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"thin viable vegetative cell","type":"exact"},{"name":"viable thin cell during vegetative growth","type":"exact"},{"name":"viable thin vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable vegetative cell with decreased cell diameter","type":"exact"},{"name":"viable vegetative cell with decreased cell thickness","type":"exact"},{"name":"viable vegetative cell with decreased cell width","type":"exact"}],"termid":"FYPO:0001877","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001877":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PR:O94553
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04900","PANTHER:PTHR12780:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC290.02","secondary_identifiers":["UniProtKB:O94553"],"synonyms":[{"name":"DNA-directed RNA polymerase III 34 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3F","type":"exact"}],"termid":"PR:O94553"}


id: GO:0097673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is YLR224W in S. cerevisiae.","definition_xrefs":["PMID:25982115","GOC:jd","GOC:vw","PMID:14747994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Ucc1 ubiquitin ligase complex","synonyms":[{"name":"SCF-YLR224W ubiquitin ligase complex","type":"exact"}],"termid":"GO:0097673"}


id: PBO:0056443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 16","termid":"PBO:0056443"}


id: PBO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Sec73 (predicted)","termid":"PBO:0001574"}


id: PBO:0055321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2749","termid":"PBO:0055321"}


id: PATO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000751 locomotor activity value (obsolete PATO:0000751)","termid":"PATO:0000751"}


id: PBO:0017909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transmembrane transporter (predicted)","termid":"PBO:0017909"}


id: PR:O42842
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenine phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11776:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.03","secondary_identifiers":["UniProtKB:O42842"],"synonyms":[{"name":"APRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC23A1.03","type":"related"},{"name":"Spom972h-APRT","type":"exact"}],"termid":"PR:O42842"}


id: PBO:0117054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACC1 antisense RNA 1","termid":"PBO:0117054"}


id: PBO:0062324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 6","termid":"PBO:0062324"}


id: GO:1902089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell wall polysaccharide catabolic process that is involved in lateral root development.","definition_xrefs":["PMID:23479623","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"},{"relation_name":"part_of","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall polysaccharide catabolic process involved in lateral root development","synonyms":[{"name":"cell wall polysaccharide breakdown involved in lateral root development","type":"exact"}],"termid":"GO:1902089"}


id: PBO:0050766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 28","termid":"PBO:0050766"}


id: MONDO:0859271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"glycosylphosphatidylinositol biosynthesis defect 25","secondary_identifiers":["UMLS:C5774191","OMIM:619985","MEDGEN:1823964"],"termid":"MONDO:0859271","xrefs":{"Monarch":{"xref_id":"0859271"}}}


id: MONDO:0017991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory large-vessel vasculitis primarily affecting the aorta and its major branches, but also other large vessels, causing stenosis, occlusion, or aneurysm.","definition_xrefs":["Orphanet:3287"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"aortic arch defects","termid":"MONDO:0015236"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Takayasu arteritis","secondary_identifiers":["GARD:7730","MEDGEN:21458","ICD9:446.7","icd11.foundation:1327645131","MESH:D013625","DOID:2508","NANDO:2200423","OMIM:207600","Orphanet:99079","UMLS:C0039263","NANDO:1200251","EFO:1001857","NCIT:C35062","MedDRA:10043097","NCIT:C34391","SCTID:239937004","NORD:806"],"synonyms":[{"name":"Arteritis, Takayasu","type":"exact"},{"name":"TA","type":"related"},{"name":"Takayasu arteritis","type":"exact"},{"name":"Takayasu disease","type":"related"},{"name":"Takayasu's arteritis","type":"exact"},{"name":"Takayasu's disease","type":"exact"},{"name":"Young female arteritis","type":"related"},{"name":"aortic arch arteritis","type":"exact"},{"name":"aortic arch syndrome","type":"exact"},{"name":"cervical aortic arch","type":"exact"},{"name":"idiopathic aortitis","type":"exact"},{"name":"pharyngeal arch artery syndromic disease","type":"exact"},{"name":"pulseless disease","type":"related"}],"termid":"MONDO:0017991","xrefs":{"Monarch":{"xref_id":"0017991"}}}


id: MONDO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete craniodiaphyseal dysplasia (obsolete MONDO:0000846)","termid":"MONDO:0000846","xrefs":{"Monarch":{"xref_id":"0000846"}}}


id: PBO:0078676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (TTT) 9-1","termid":"PBO:0078676"}


id: GO:0140237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the presynapse, and that modulates chemical synaptic transmission.","definition_xrefs":["PMID:27321671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at presynapse","termid":"GO:0140236"},{"relation_name":"regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translation at presynapse, modulating chemical synaptic transmission","termid":"GO:0140237"}


id: PBO:0041766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 6","termid":"PBO:0041766"}


id: PBO:0044264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 2","termid":"PBO:0044264"}


id: PBO:0061688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 160","termid":"PBO:0061688"}


id: PBO:0054086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1438","termid":"PBO:0054086"}


id: GO:1900409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to oxidative stress.","definition_xrefs":["GOC:TermGenie","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidative stress","termid":"GO:1900407"},{"relation_name":"is_a","term_name":"positive regulation of response to oxidative stress","termid":"GO:1902884"},{"relation_name":"positively_regulates","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to oxidative stress","synonyms":[{"name":"activation of adaptive response to oxidative stress","type":"narrow"},{"name":"activation of cellular response to oxidative stress","type":"narrow"},{"name":"positive regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"up regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"up regulation of cellular response to oxidative stress","type":"exact"},{"name":"up-regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"up-regulation of cellular response to oxidative stress","type":"exact"},{"name":"upregulation of adaptive response to oxidative stress","type":"narrow"},{"name":"upregulation of cellular response to oxidative stress","type":"exact"}],"termid":"GO:1900409"}


id: GO:0015324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of peptide-acetyl-CoA from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide-acetyl-CoA secondary active transmembrane transporter activity (obsolete GO:0015324)","synonyms":[{"name":"peptide-acetyl-CoA transporter activity","type":"related"}],"termid":"GO:0015324"}


id: PBO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic protease Sxa1","termid":"PBO:0002000"}


id: PBO:0004113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv41 (predicted)","termid":"PBO:0004113"}


id: GO:0035768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endothelial cell in response to the presence of fibroblast growth factor (FGF).","definition_xrefs":["GOC:BHF","CL:0000115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"},{"relation_name":"is_a","term_name":"endothelial cell chemotaxis","termid":"GO:0035767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:0035768"}


id: PR:Q10352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F12.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.10c","synonyms":[{"name":"Spom972h-SPAC1F12.10c","type":"exact"}],"termid":"PR:Q10352"}


id: PBO:0052169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 18","termid":"PBO:0052169"}


id: PBO:0035706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035706"}


id: GO:0031949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid metabolic process","termid":"GO:0031943"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"glucocorticoid catabolic process","termid":"GO:0006713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of glucocorticoid catabolic process","termid":"GO:0031949"}


id: PBO:0045150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 8","termid":"PBO:0045150"}


id: PBO:0049702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"highly accelerated region 1B","termid":"PBO:0049702"}


id: MONDO:0000551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma that involves the retroperitoneal space.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblastoma","termid":"MONDO:0005072"},{"relation_name":"is_a","term_name":"retroperitoneal neoplasm","termid":"MONDO:0024645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retroperitoneal neuroblastoma","secondary_identifiers":["DOID:0050937","MEDGEN:1843500","UMLS:C2211613"],"synonyms":[{"name":"neuroblastoma of retroperitoneal space","type":"exact"},{"name":"retroperitoneal space neuroblastoma","type":"exact"}],"termid":"MONDO:0000551","xrefs":{"Monarch":{"xref_id":"0000551"}}}


id: GO:0031475
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108451,116504],"is_not":false,"summary":null,"term":"GO:0031475"}]},"cv_name":"cellular_component","definition":"A myosin complex containing a dimer of class V myosin heavy chains and associated light chains; involved in intracellular transport. Myosin V is a dimeric molecule consisting of conserved motor domains followed by 6 IQ motifs which bind specific light chains and calmodulin. The tail domain is important for cellular localization and cargo binding and can be divided into an alpha-helical coiled coil region and a C-terminal globular region.","definition_xrefs":["Wikipedia:Myosin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"myosin V complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031475","terms_by_termid":{"GO:0031475":null}}


id: PBO:0056131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme","termid":"PBO:0056131"}


id: PBO:0059013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane magnesium transporter 1","termid":"PBO:0059013"}


id: MONDO:0015969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic thyroid disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic thyroid disease (obsolete MONDO:0015969)","secondary_identifiers":["Orphanet:183631"],"synonyms":[{"name":"rare genetic thyroid disease","type":"exact"}],"termid":"MONDO:0015969","xrefs":{"Monarch":{"xref_id":"0015969"}}}


id: GO:0018394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-lysine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine acetylation","termid":"GO:0018394"}


id: MONDO:0975833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 28","secondary_identifiers":["OMIM:620978"],"termid":"MONDO:0975833","xrefs":{"Monarch":{"xref_id":"0975833"}}}


id: PBO:0028166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caffeine_during_cellular_response_to_hydroxyurea","termid":"PBO:0028166"}


id: PR:Q9P768
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A B(0,+)-type amino acid transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01564","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease P7G5.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP7G5.06","secondary_identifiers":["UniProtKB:Q9P768"],"synonyms":[{"name":"Spom972h-SLC7A9","type":"exact"}],"termid":"PR:Q9P768"}


id: SO:0002219
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which the function of a gene product is retained with respect to a reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_normal","synonyms":[{"name":"function retained variant","type":"exact"},{"name":"function_retained_variant","type":"related"},{"name":"functionally normal","type":"related"}],"termid":"SO:0002219"}


id: GO:0097176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving epoxides, compounds in which an oxygen atom is directly attached to two adjacent or non-adjacent carbon atoms of a carbon chain or ring system; thus cyclic ethers.","definition_xrefs":["GOC:rs","PMID:15822179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"epoxide metabolic process","synonyms":[{"name":"epoxide metabolism","type":"exact"}],"termid":"GO:0097176"}


id: MOD:00583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a thiophosphono group (H2PO2S, 'thiophosphate').","definition_xrefs":["Unimod:260","PubMed:12110917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphorylated residue","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:00583"}


id: PR:Q9USZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02755","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C1306.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1306.02","secondary_identifiers":["UniProtKB:Q9USZ0"],"synonyms":[{"name":"Spom972h-WDR6","type":"exact"}],"termid":"PR:Q9USZ0"}


id: FYPO:0001288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phospholipid measured in a cell is higher than normal. A phospholipid is any lipid containing phosphoric acid as a mono- or di-ester.","definition_xrefs":["CHEBI:16247","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered phospholipid level","termid":"FYPO:0001287"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased phospholipid level","synonyms":[{"name":"increased cellular phospholipid level","type":"exact"},{"name":"increased phospholipid accumulation","type":"related"},{"name":"increased phospholipid level during mitotic cell cycle","type":"related"},{"name":"increased phospholipid level during vegetative growth","type":"exact"}],"termid":"FYPO:0001288"}


id: PBO:0064223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C epsilon 1","termid":"PBO:0064223"}


id: PBO:0039683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family B member 1","termid":"PBO:0039683"}


id: GO:0032754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-5 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-5 production","termid":"GO:0032674"},{"relation_name":"positively_regulates","term_name":"interleukin-5 production","termid":"GO:0032634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-5 production","secondary_identifiers":["GO:2000664","GO:0045407"],"synonyms":[{"name":"activation of interleukin-5 production","type":"narrow"},{"name":"positive regulation of IL-5 production","type":"exact"},{"name":"positive regulation of interleukin-5 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-5 secretion","type":"narrow"},{"name":"stimulation of interleukin-5 production","type":"narrow"},{"name":"up regulation of interleukin-5 production","type":"exact"},{"name":"up-regulation of interleukin-5 production","type":"exact"},{"name":"upregulation of interleukin-5 production","type":"exact"}],"termid":"GO:0032754"}


id: PBO:0048541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET1-SH3BGR readthrough","termid":"PBO:0048541"}


id: PBO:0052742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 34","termid":"PBO:0052742"}


id: PBO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonicaciduria","termid":"PBO:0000195"}


id: GO:0046255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,6-trinitrotoluene biosynthetic process (obsolete GO:0046255)","synonyms":[{"name":"2,4,6-trinitrotoluene anabolism","type":"exact"},{"name":"2,4,6-trinitrotoluene biosynthesis","type":"exact"},{"name":"2,4,6-trinitrotoluene biosynthetic process","type":"exact"},{"name":"2,4,6-trinitrotoluene formation","type":"exact"},{"name":"2,4,6-trinitrotoluene synthesis","type":"exact"}],"termid":"GO:0046255"}


id: PBO:0070030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1327, pseudogene","termid":"PBO:0070030"}


id: GO:0030964
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integral membrane complex that possesses NADH oxidoreductase activity. The complex is one of the components of the electron transport chain. It catalyzes the transfer of a pair of electrons from NADH to a quinone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NADH dehydrogenase complex","secondary_identifiers":["GO:0030966","GO:0030025","GO:0031677","GO:0031675","GO:0031678","GO:0045280","Wikipedia:NADH_dehydrogenase"],"synonyms":[{"name":"NADH dehydrogenase complex (plastoquinone)","type":"narrow"},{"name":"NADH dehydrogenase complex (quinone)","type":"narrow"},{"name":"NADH dehydrogenase complex (ubiquinone)","type":"narrow"},{"name":"NADH:plastoquinone reductase complex","type":"narrow"},{"name":"plastid NADH dehydrogenase complex (plastoquinone)","type":"narrow"}],"termid":"GO:0030964"}


id: GO:0140148
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Gel formed of proteglycans filling the basement membrane ECM space.","definition_xrefs":["PMID:28324731","PMID:21421915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"},{"relation_name":"part_of","term_name":"basement membrane","termid":"GO:0005604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gel phase of basement membrane","termid":"GO:0140148"}


id: PR:O00084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O00084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.11c","synonyms":[{"name":"Spom972h-ure2","type":"exact"},{"name":"urea amidohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00084"}


id: GO:0022036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a rhombomere cell.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere cell differentiation","termid":"GO:0022036"}


id: MONDO:0014237
data:
  {"annotated_genes":["SJAG_04558","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86135,86136],"is_not":false,"summary":null,"term":"MONDO:0014237"}]},"cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the SYNE4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 76","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110524","GARD:22650","MEDGEN:811137","UMLS:C3147083","OMIM:615540"],"synonyms":[{"name":"DFNB76","type":"narrow"},{"name":"SYNE4 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in SYNE4","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 76","type":"exact"},{"name":"deafness, autosomal recessive 76","type":"narrow"},{"name":"deafness, autosomal recessive type 76","type":"narrow"}],"termid":"MONDO:0014237","terms_by_termid":{"MONDO:0014237":null},"xrefs":{"Monarch":{"xref_id":"0014237"}}}


id: MONDO:0015226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with limb malformations as a major feature (obsolete MONDO:0015226)","secondary_identifiers":["Orphanet:109009"],"termid":"MONDO:0015226","xrefs":{"Monarch":{"xref_id":"0015226"}}}


id: MONDO:0800195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achalasia-alacrima syndrome","synonyms":[{"name":"AAAS","type":"exact"}],"termid":"MONDO:0800195","xrefs":{"Monarch":{"xref_id":"0800195"}}}


id: MOD:01808
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-leucine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated leucine","termid":"MOD:00662"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated leucine","synonyms":[{"name":"MeLeu","type":"exact"}],"termid":"MOD:01808"}


id: PBO:0067393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 498, pseudogene","termid":"PBO:0067393"}


id: MONDO:0031008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 24","secondary_identifiers":["GARD:18003","OMIM:619263","UMLS:C5543267","MEDGEN:1781068","Orphanet:567548"],"synonyms":[{"name":"NPHS24","type":"exact"},{"name":"idiopathic SRNS","type":"exact"},{"name":"idiopathic steroid-resistant nephrotic syndrome","type":"exact"}],"termid":"MONDO:0031008","xrefs":{"Monarch":{"xref_id":"0031008"}}}


id: GO:0009111
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body, carried out by individual cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic process","termid":"GO:0006766"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"vitamin catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vitamin breakdown","type":"exact"},{"name":"vitamin catabolism","type":"exact"},{"name":"vitamin degradation","type":"exact"}],"termid":"GO:0009111","terms_by_termid":{"GO:0042820":null}}


id: GO:0060013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex process in which an animal immediately tries to turn over after being placed in a supine position.","definition_xrefs":["GOC:dph","PMID:8635460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"righting reflex","synonyms":[{"name":"righting response","type":"exact"}],"termid":"GO:0060013"}


id: PBO:0047517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculation and elongation protein zeta 2","termid":"PBO:0047517"}


id: PBO:0001232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein","termid":"PBO:0001232"}


id: PBO:0082474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; promotes vegetative growth in response to nutrients via the Ras-cAMP signaling pathway; partially redundant with Tpk1p and Tpk2p; localizes to P-bodies during stationary phase; TPK3 has a paralog, TPK1, that arose from the whole genome duplication","termid":"PBO:0082474"}


id: GO:0046504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycerol ether biosynthetic process","synonyms":[{"name":"glycerol ether anabolism","type":"exact"},{"name":"glycerol ether biosynthesis","type":"exact"},{"name":"glycerol ether formation","type":"exact"},{"name":"glycerol ether synthesis","type":"exact"}],"termid":"GO:0046504"}


id: PBO:0049427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 4","termid":"PBO:0049427"}


id: PBO:0082308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic protease; member of the yapsin family of proteases involved in cell wall growth and maintenance; attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor","termid":"PBO:0082308"}


id: PBO:0039607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine nucleotide translocase lysine methyltransferase","termid":"PBO:0039607"}


id: MONDO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete basal ganglia calcification, idiopathic (obsolete MONDO:0000109)","termid":"MONDO:0000109","xrefs":{"Monarch":{"xref_id":"0000109"}}}


id: PBO:0066474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase pseudogene 1","termid":"PBO:0066474"}


id: GO:0050967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to the perception of pain in which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dph","GOC:tb","GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception of pain","termid":"GO:0062149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in sensory perception of pain","synonyms":[{"name":"detection of electrical stimulus during sensory perception of pain","type":"related"},{"name":"perception of pain, detection of electrical stimulus","type":"exact"},{"name":"perception of pain, sensory detection of electrical stimulus","type":"exact"},{"name":"perception of pain, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during perception of pain","type":"related"},{"name":"sensory transduction of electrical stimulus during perception of pain","type":"related"}],"termid":"GO:0050967"}


id: PBO:0090516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxy-acid dehydratase Ilv3","termid":"PBO:0090516"}


id: PBO:0016569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siva family protein, human apoptosis-inducing factor ortholog (predicted)","termid":"PBO:0016569"}


id: PBO:0063259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 5","termid":"PBO:0063259"}


id: PBO:0078158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 36/delta variable 7","termid":"PBO:0078158"}


id: PBO:0064885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 scaffold subunit Abeta","termid":"PBO:0064885"}


id: MONDO:0000521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the major or minor salivary glands. Representative examples include carcinoma ex pleomorphic adenoma, adenocarcinoma, adenoid cystic carcinoma, and mucoepidermoid carcinoma.","definition_xrefs":["NCIT:C9272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland cancer","termid":"MONDO:0004669"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"salivary gland carcinoma","secondary_identifiers":["NANDO:2200076","DOID:0050904","UMLS:C0948750","ONCOTREE:SACA","MEDGEN:215302"],"synonyms":[{"name":"carcinoma of saliva-secreting gland","type":"exact"},{"name":"carcinoma of salivary gland","type":"exact"},{"name":"carcinoma of the salivary gland","type":"exact"},{"name":"saliva-secreting gland carcinoma","type":"exact"},{"name":"salivary carcinoma","type":"related"},{"name":"salivary gland cancer","type":"broad"},{"name":"salivary gland carcinoma","type":"exact"}],"termid":"MONDO:0000521","xrefs":{"Monarch":{"xref_id":"0000521"}}}


id: GO:0000381
data:
  {"annotated_genes":["SJAG_04782"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65209],"is_not":false,"summary":null,"term":"GO:0000381"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"regulates","term_name":"alternative mRNA splicing, via spliceosome","termid":"GO:0000380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04782":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of alternative mRNA splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"regulation of alternative nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"splice site selection","type":"broad"}],"termid":"GO:0000381","terms_by_termid":{"GO:0000381":null}}


id: PBO:0091245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD binding oxidoreductase, implicated in cellular detoxification","termid":"PBO:0091245"}


id: GO:0002759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an antimicrobial humoral response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"antimicrobial humoral response","termid":"GO:0019730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antimicrobial humoral response","termid":"GO:0002759"}


id: GO:0042586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formyl-L-methionyl peptide + H2O = formate + methionyl peptide.","definition_xrefs":["EC:3.5.1.88","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"peptide deformylase activity","secondary_identifiers":["MetaCyc:3.5.1.88-RXN","RHEA:24420"],"synonyms":[{"name":"PDF activity","type":"related"},{"name":"formyl-L-methionyl peptide amidohydrolase activity","type":"related"},{"name":"polypeptide deformylase activity","type":"related"}],"termid":"GO:0042586"}


id: PBO:0033796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_fidelity_of_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0033796"}


id: MONDO:0011543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete BRCA3 (obsolete MONDO:0011543)","secondary_identifiers":["MESH:C565336","OMIM:605365"],"synonyms":[{"name":"BRCA3","type":"exact"},{"name":"Brcax","type":"related"},{"name":"breast cancer 3","type":"related"},{"name":"moved to 114480","type":"related"}],"termid":"MONDO:0011543","xrefs":{"Monarch":{"xref_id":"0011543"}}}


id: PBO:0011089
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by different signals","termid":"PBO:0011089"}


id: PBO:0031633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_gene_silencing","termid":"PBO:0031633"}


id: MONDO:0020481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotonia fluctuans (MF) is a form of potassium-aggravated myotonia (PAM) which is cold insensitive, dramatically fluctuating and profoundly worsened by potassium ingestion.","definition_xrefs":["Orphanet:99734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium-aggravated myotonia","termid":"MONDO:0018959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotonia fluctuans","secondary_identifiers":["UMLS:C0752355","NCIT:C122789","MEDGEN:156269","icd11.foundation:1294270721","SCTID:715788001","GARD:16904"],"synonyms":[{"name":"Fluctuating myotonia","type":"exact"},{"name":"MF","type":"exact"},{"name":"exercise-induced delayed-onset myotonia","type":"exact"}],"termid":"MONDO:0020481","xrefs":{"Monarch":{"xref_id":"0020481"}}}


id: PBO:0005613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med19/Rox3","termid":"PBO:0005613"}


id: FYPO:0001597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which valine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal valine import","synonyms":[{"name":"normal L-valine import","type":"exact"},{"name":"normal L-valine import across plasma membrane","type":"exact"},{"name":"normal valine import during mitotic cell cycle","type":"related"},{"name":"normal valine import during vegetative growth","type":"exact"},{"name":"normal valine import into cell","type":"exact"},{"name":"normal valine uptake","type":"exact"}],"termid":"FYPO:0001597"}


id: GO:1903795
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11336802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of inorganic anion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of inorganic anion membrane transport","type":"exact"},{"name":"regulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903795","terms_by_termid":{"GO:2000185":null}}


id: PBO:0054293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1684","termid":"PBO:0054293"}


id: MONDO:0010805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bladder exstrophy (or classic bladder exstrophy; CEB) is a congenital genitourinary malformation belonging to the spectrum of the exstrophy-epispadias complex (EEC) and is characterized by an evaginated bladder plate, epispadias and an anterior defect of the pelvis, pelvic floor and abdominal wall.","definition_xrefs":["Orphanet:93930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exstrophy-epispadias complex","termid":"MONDO:0017919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"bladder exstrophy","secondary_identifiers":["ICD9:753.5","NCIT:C123207","UMLS:C0005689","MESH:D001746","MEDGEN:2661","DOID:0080174","GARD:6398","NORD:860","SCTID:61758007","HP:0002836","icd11.foundation:1927556258"],"synonyms":[{"name":"Bladder Exstrophy-Epispadias-Cloacal Exstrophy Complex","type":"exact"},{"name":"bladder exstrophy","type":"exact"},{"name":"bladder exstrophy (disease)","type":"exact"},{"name":"bladder exstrophy and epispadias Complex","type":"related"},{"name":"classic exstrophy of the bladder","type":"exact"},{"name":"ectopia vesicae","type":"exact"},{"name":"exstrophy of bladder","type":"related"},{"name":"exstrophy of the bladder","type":"related"}],"termid":"MONDO:0010805","xrefs":{"Monarch":{"xref_id":"0010805"}}}


id: MONDO:0004410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the penis and is characterized by the presence of malignant spindle-shaped cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"},{"relation_name":"is_a","term_name":"sarcomatoid squamous cell carcinoma","termid":"MONDO:0021663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcomatoid penile squamous cell carcinoma","secondary_identifiers":["NCIT:C6984","MEDGEN:235580","UMLS:C1335923","DOID:7958"],"synonyms":[{"name":"sarcomatoid carcinoma of the penis","type":"exact"},{"name":"sarcomatoid penile carcinoma","type":"exact"},{"name":"sarcomatoid penile squamous cell carcinoma","type":"exact"},{"name":"sarcomatous carcinoma of the penis","type":"exact"},{"name":"spindle cell carcinoma of the penis","type":"exact"},{"name":"squamous cell carcinoma of penis, sarcomatoid type","type":"exact"},{"name":"squamous cell carcinoma of the penis, sarcomatoid type","type":"exact"}],"termid":"MONDO:0004410","xrefs":{"Monarch":{"xref_id":"0004410"}}}


id: PBO:0017787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase Rki1 (predicted)","termid":"PBO:0017787"}


id: PBO:0088199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-knuckle transcription factor, repressor and activator; regulates genes involved in branched chain amino acid biosynthesis and ammonia assimilation; acts as a repressor in leucine-replete conditions and as an activator in the presence of alpha-isopropylmalate, an intermediate in leucine biosynthesis that accumulates during leucine starvation","termid":"PBO:0088199"}


id: PBO:0074184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 5","termid":"PBO:0074184"}


id: MONDO:0000252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An diarrhea (disease) involving a pathogenic inflammatory response in the intestinal mucosa.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal mucositis","termid":"MONDO:0000888"},{"relation_name":"is_a","term_name":"diarrheal disease","termid":"MONDO:0001673"},{"relation_name":"is_a","term_name":"gastroenteritis","termid":"MONDO:0002269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"inflammatory diarrhea","secondary_identifiers":["DOID:0050132","UMLS:C0521604","MEDGEN:636702","SCTID:95544006"],"termid":"MONDO:0000252","xrefs":{"Monarch":{"xref_id":"0000252"}}}


id: PBO:0053287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 1","termid":"PBO:0053287"}


id: GO:0075209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of cAMP-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host cAMP-mediated signal transduction (obsolete GO:0075209)","synonyms":[{"name":"positive regulation by symbiont of host cAMP-mediated signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075209"}


id: PBO:0039401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 6","termid":"PBO:0039401"}


id: PBO:0047868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q32.1)","termid":"PBO:0047868"}


id: GO:0097750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane tubulation process occurring in an endosome membrane.","definition_xrefs":["PMID:26911690","GOC:PARL","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome organization","termid":"GO:0007032"},{"relation_name":"is_a","term_name":"membrane tubulation","termid":"GO:0097749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"endosome membrane tubulation","synonyms":[{"name":"endosomal membrane tubulation","type":"exact"}],"termid":"GO:0097750"}


id: PBO:0060100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 1","termid":"PBO:0060100"}


id: GO:0042888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of molybdenum (Mo) ions from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"molybdenum ion transmembrane transporter activity","termid":"GO:0042888"}


id: PBO:0046676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 2","termid":"PBO:0046676"}


id: PBO:0034448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0034448"}


id: PBO:0041735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin-lysine N-methyltransferase","termid":"PBO:0041735"}


id: GO:0050795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.","definition_xrefs":["GOC:go_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of behavior","synonyms":[{"name":"regulation of behaviour","type":"exact"}],"termid":"GO:0050795"}


id: PBO:0027366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_actin_cortical_patches","termid":"PBO:0027366"}


id: MONDO:1012600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cystinuria that occurs in cats due to a mutation in the SLC3A1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystinuria, non-human animal","termid":"MONDO:1012968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystinuria, SLC3A1-related, domestic cat","secondary_identifiers":["OMIA:000256-9685"],"synonyms":[{"name":"cystinuria, type I - A, domestic cat","type":"related"}],"termid":"MONDO:1012600","xrefs":{"Monarch":{"xref_id":"1012600"}}}


id: GO:1902822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["PMID:23949442","GOC:TermGenie","GOC:PARL","GO_REF:0000058","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of late endosome to lysosome transport","synonyms":[{"name":"regulation of prevacuolar compartment to lysosome transport","type":"broad"}],"termid":"GO:1902822"}


id: PBO:0063667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins GalNAc transferase 4","termid":"PBO:0063667"}


id: PBO:0075849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 1","termid":"PBO:0075849"}


id: FYPO:0007708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to one or both cell tips shows a normal (i.e. indistinguishable from wild type) temporal pattern of localization. For example, a protein may move from one cell tip to the other at a normal frequency and amplitude.","definition_xrefs":["PMID:30279276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal dynamic protein localization to cell tip","synonyms":[{"name":"normal dynamic protein localization to cell end","type":"exact"},{"name":"normal dynamic protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"normal dynamic protein localization to cell tip during vegetative growth","type":"exact"},{"name":"normal oscillatory protein localization to cell tip","type":"narrow"}],"termid":"FYPO:0007708"}


id: MONDO:0011561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with variation in the region 10q24.","definition_xrefs":["DOID:0110038","PMID:16385451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"Alzheimer disease 6","secondary_identifiers":["OMIM:605526","MESH:C565325","UMLS:C1854187","GARD:16509","MEDGEN:381362"],"synonyms":[{"name":"AD6","type":"exact"},{"name":"Alzheimer disease 6","type":"exact"},{"name":"Alzheimer disease 6, late onset","type":"exact"},{"name":"Alzheimer disease 6, late-onset","type":"related"},{"name":"Alzheimer disease type 6","type":"exact"},{"name":"Alzheimer's disease 6","type":"exact"},{"name":"Alzheimer's disease type 6","type":"exact"},{"name":"plasma Beta-amyloid-42 level quantitative trait locus","type":"related"}],"termid":"MONDO:0011561","xrefs":{"Monarch":{"xref_id":"0011561"}}}


id: MONDO:0003479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pneumonia that is an acute inflammation of the lungs induced by inhalation of metal fumes or toxic gasses and vapors. It is a sentinel health event (occupational) associated with exposure to ammonia (refrigeration, fertilizer, and oil refining industries), chlorine (alkali and bleach industries), nitrogen oxides (silo fillers, arc welders, and nitric acid industry), sulfur dioxide (paper, refrigeration, and oil refining industries), cadmium (processors and cadmium smelters), trimellitic anhydride (plastics and organic chemical synthesis), and vanadium pentoxide (boilermakers). The two types of pulmonary agents are central and peripheral. Central pulmonary agents, for example, ammonia, are water soluble irritants that injure the upper airways. Peripheral pulmonary agents, for example, phosgene, NOx, and PFIB, are slightly water soluble irritants that injure the alveolar-capillary membranes. Chlorine has both central and peripheral effects.","definition_xrefs":["DOID:551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic pneumonitis","secondary_identifiers":["SCTID:233733000","UMLS:C3714582","ICD9:506.9","MEDGEN:811389"],"synonyms":[{"name":"acute chemical fume pulmonary edema","type":"exact"},{"name":"acute chemical fume pulmonary oedema","type":"exact"},{"name":"acute chemical pulmonary edema","type":"exact"},{"name":"acute chemical pulmonary oedema","type":"exact"}],"termid":"MONDO:0003479","xrefs":{"Monarch":{"xref_id":"0003479"}}}


id: PBO:0061328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B6","termid":"PBO:0061328"}


id: PBO:0057843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3156-3","termid":"PBO:0057843"}


id: MONDO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the anal canal or anal margin. Representative examples of benign neoplasms include squamous papilloma and papillary hidradenoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and melanoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal neoplasm","termid":"MONDO:0002165"},{"relation_name":"is_a","term_name":"anus disorder","termid":"MONDO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anus neoplasm","secondary_identifiers":["NCIT:C2877","SCTID:126849006","UMLS:C0003463","DOID:4551","EFO:0003835","MEDGEN:360","MESH:D001005"],"synonyms":[{"name":"anal neoplasm","type":"exact"},{"name":"anal neoplasms, benign and malignant","type":"exact"},{"name":"anal tumor","type":"exact"},{"name":"anal tumors","type":"exact"},{"name":"anal tumour","type":"exact"},{"name":"anal tumours","type":"exact"},{"name":"anus neoplasm","type":"exact"},{"name":"anus neoplasm (disease)","type":"exact"},{"name":"anus tumor","type":"exact"},{"name":"anus tumour","type":"exact"},{"name":"neoplasm of anus","type":"exact"},{"name":"neoplasm of the anus","type":"exact"},{"name":"tumor of anus","type":"exact"},{"name":"tumor of the anus","type":"exact"},{"name":"tumour of anus","type":"exact"},{"name":"tumour of the anus","type":"exact"}],"termid":"MONDO:0003046","xrefs":{"Monarch":{"xref_id":"0003046"}}}


id: GO:0005460
data:
  {"annotated_genes":["SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76323],"is_not":false,"summary":null,"term":"GO:0005460"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucose from one side of a membrane to the other. UDP-glucose is a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"UDP-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005460","terms_by_termid":{"GO:0005460":null}}


id: PBO:0079807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B28","termid":"PBO:0079807"}


id: PBO:0029232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_during_cellular_response_to_non-ionic_osmotic_stress","termid":"PBO:0029232"}


id: MONDO:0016250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of breast adenocarcinoma that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare adenocarcinoma of the breast (obsolete MONDO:0016250)","secondary_identifiers":["ICD10CM:C50.2","ICD10CM:C50.6","ICD10CM:C50.3","Orphanet:213528"],"synonyms":[{"name":"rare breast adenocarcinoma","type":"exact"}],"termid":"MONDO:0016250","xrefs":{"Monarch":{"xref_id":"0016250"}}}


id: GO:0032283
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An acetate CoA-transferase complex located in the stroma of a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate CoA-transferase complex","termid":"GO:0009329"},{"relation_name":"part_of","term_name":"plastid acetyl-CoA carboxylase complex","termid":"GO:0032282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid acetate CoA-transferase complex","termid":"GO:0032283"}


id: MONDO:0033853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cataract-severe neonatal hepatopathy-global developmental delay syndrome","secondary_identifiers":["MEDGEN:1814478","Orphanet:521432","GARD:22144","UMLS:C5681444"],"termid":"MONDO:0033853","xrefs":{"Monarch":{"xref_id":"0033853"}}}


id: PBO:0069034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 279, pseudogene","termid":"PBO:0069034"}


id: GO:0005611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3, beta1 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-6 complex","synonyms":[{"name":"laminin-311 complex","type":"exact"},{"name":"laminin-6A complex","type":"exact"}],"termid":"GO:0005611"}


id: PBO:0011473
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of maltose to glucose is 14.5 (mM min-1 ml-2)","termid":"PBO:0011473"}


id: PBO:0064348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin B2","termid":"PBO:0064348"}


id: GO:1903124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of thioredoxin peroxidase activity.","definition_xrefs":["GOC:bf","PMID:21850687","GOC:TermGenie","GOC:PARL","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of thioredoxin peroxidase activity (obsolete GO:1903124)","synonyms":[{"name":"down regulation of TPx activity","type":"exact"},{"name":"down regulation of TrxPx activity","type":"exact"},{"name":"down regulation of thiol peroxidase activity","type":"exact"},{"name":"down regulation of thioredoxin peroxidase activity","type":"exact"},{"name":"down-regulation of TPx activity","type":"exact"},{"name":"down-regulation of TrxPx activity","type":"exact"},{"name":"down-regulation of thiol peroxidase activity","type":"exact"},{"name":"down-regulation of thioredoxin peroxidase activity","type":"exact"},{"name":"downregulation of TPx activity","type":"exact"},{"name":"downregulation of TrxPx activity","type":"exact"},{"name":"downregulation of thiol peroxidase activity","type":"exact"},{"name":"downregulation of thioredoxin peroxidase activity","type":"exact"},{"name":"inhibition of TPx activity","type":"narrow"},{"name":"inhibition of TrxPx activity","type":"narrow"},{"name":"inhibition of thiol peroxidase activity","type":"narrow"},{"name":"inhibition of thioredoxin peroxidase activity","type":"narrow"},{"name":"negative regulation of TPx activity","type":"exact"},{"name":"negative regulation of TrxPx activity","type":"exact"},{"name":"negative regulation of thiol peroxidase activity","type":"exact"}],"termid":"GO:1903124"}


id: MONDO:0017399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Right temporal lobar atrophy (RTLA) is an anatomic variant of frontotemporal dementia (FTD), characterized by behavioral dysfunction, personality changes, episodic memory loss, and prosopagnosia; attributable to an asymmetrical predominantly right-sided, frontotemporal atrophy.","definition_xrefs":["Orphanet:293848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semantic dementia","termid":"MONDO:0010857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"frontotemporal dementia, right temporal atrophy variant","secondary_identifiers":["SCTID:716667005"],"synonyms":[{"name":"RTLA","type":"exact"},{"name":"rvFTD","type":"exact"}],"termid":"MONDO:0017399","xrefs":{"Monarch":{"xref_id":"0017399"}}}


id: PBO:0063884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class N","termid":"PBO:0063884"}


id: PBO:0027630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_subtelomere","termid":"PBO:0027630"}


id: MONDO:0010387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete invasive pneumococcal disease, recurrent isolated, 2 (obsolete MONDO:0010387)","secondary_identifiers":["OMIM:300640"],"termid":"MONDO:0010387","xrefs":{"Monarch":{"xref_id":"0010387"}}}


id: PBO:0067485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 619, pseudogene","termid":"PBO:0067485"}


id: PBO:0064028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 62","termid":"PBO:0064028"}


id: PBO:0062683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 4","termid":"PBO:0062683"}


id: PBO:0071057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 59","termid":"PBO:0071057"}


id: GO:0045172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Germline specific intercellular bridge. During cyst formation in insects, ring canals interconnect the cells of the cyst, facilitating the passage of cytoplasmic components between cells.","definition_xrefs":["GOC:mtg_sensu","PMID:9635420","PMID:9655801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular bridge","termid":"GO:0045171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"germline ring canal","termid":"GO:0045172"}


id: GO:0052724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 3-diphospho-1D-myo-inositol (1,2,4,5,6)pentakisphosphate.","definition_xrefs":["PMID:18981179","MetaCyc:RXN-10971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 3-kinase activity","termid":"GO:0052724"}


id: GO:0030289
data:
  {"annotated_genes":["SJAG_00369","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73007,107722],"is_not":false,"summary":null,"term":"GO:0030289"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex formed by the catalytic subunit of protein phosphatase 4 plus one or more regulatory subunits.","definition_xrefs":["GOC:bhm","PMID:10026142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein phosphatase 4 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030289","terms_by_termid":{"GO:0030289":null}}


id: PR:P40997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ceg1 gene.","definition_xrefs":["UniProtKB:P40997","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-capping enzyme subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.08c","synonyms":[{"name":"GTP--RNA guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ceg1","type":"exact"},{"name":"mRNA guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40997"}


id: MOD:00074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to N-methyl-L-phenylalanine.","definition_xrefs":["PubMed:413571","PubMed:2577730","RESID:AA0065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated phenylalanine","termid":"MOD:01063"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-phenylalanine","synonyms":[{"name":"(2S)-2-methylamino-3-phenylpropanoic acid","type":"exact"},{"name":"MOD_RES N-methylphenylalanine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-phenylalanine","type":"exact"},{"name":"N-methylated L-phenylalanine","type":"exact"},{"name":"N-methylphenylalanine","type":"exact"},{"name":"NMe1Phe","type":"exact"}],"termid":"MOD:00074"}


id: PBO:0081485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 367","termid":"PBO:0081485"}


id: FYPO:0003794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell is normal (i.e. indistinguishable from wild type) during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular glycerol level during cellular response to osmotic stress","synonyms":[{"name":"normal cellular glycerol accumulation during cellular response to osmotic stress","type":"related"},{"name":"normal cellular glycerol level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal cellular glycerol level during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0003794"}


id: PBO:0082453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-3 sterol dehydrogenase; catalyzes the second of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; human homolog NSDHL implicated in CK syndrome, and can complement yeast null mutant; molecular target of natural product and antifungal compound FR171456","termid":"PBO:0082453"}


id: PBO:0112808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam_id","termid":"PBO:0112808"}


id: PBO:0113361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein serine/threonine kinase; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0113361"}


id: PBO:0041434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C9","termid":"PBO:0041434"}


id: MONDO:0019325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phakomatosis pigmentovascularis","termid":"MONDO:0017318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"phakomatosis cesioflammea","secondary_identifiers":["GARD:19023","MEDGEN:824729","ICD9:759.6","Orphanet:79483","SCTID:703284009","UMLS:C3838883"],"synonyms":[{"name":"phakomatosis pigmentovascularis type 2","type":"exact"}],"termid":"MONDO:0019325","xrefs":{"Monarch":{"xref_id":"0019325"}}}


id: GO:0014806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in smooth muscle, in which there is an increase in cell number by cell division, often leading to an increase in the size of an organ.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle adaptation","termid":"GO:0014805"},{"relation_name":"is_a","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle hyperplasia","termid":"GO:0014806"}


id: PBQ:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G1. IIn some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence","termid":"PBQ:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G1 arrest","synonyms":[{"name":"G0 phase","type":"related"},{"name":"cellular quiescence following G1 arrest","type":"exact"},{"name":"quiescence following G1 arrest","type":"broad"}],"termid":"PBQ:0000002"}


id: PBO:0043652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 2","termid":"PBO:0043652"}


id: PBO:0063740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 5","termid":"PBO:0063740"}


id: PBO:0086554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL149W is not an essential gene","termid":"PBO:0086554"}


id: PBO:0055043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2458","termid":"PBO:0055043"}


id: PBO:0086264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates ubiquitination of Rsp5p; has a WW domain consensus motif of PPPSY (residues 131-135) that mediates binding of Rsp5p to Ubp2p; contains an UBA domain; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086264"}


id: GO:0010083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a vegetative meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meristem growth","termid":"GO:0010075"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"regulates","term_name":"vegetative meristem growth","termid":"GO:0010448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vegetative meristem growth","synonyms":[{"name":"regulation of vegetative meristem size","type":"exact"}],"termid":"GO:0010083"}


id: PBO:0054301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1692","termid":"PBO:0054301"}


id: MONDO:0006053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A leiomyoma that involves the kidney.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal leiomyoma","secondary_identifiers":["MEDGEN:1691847","NCIT:C159209","EFO:1000050","UMLS:C5204259"],"synonyms":[{"name":"kidney leiomyoma","type":"exact"},{"name":"leiomyoma of kidney","type":"exact"}],"termid":"MONDO:0006053","xrefs":{"Monarch":{"xref_id":"0006053"}}}


id: GO:0044022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 28) + ATP = histone H3-phosphoserine (position 28) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 28 of histone H3.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0016740","GO:0004672","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H3S28 kinase activity","synonyms":[{"name":"histone kinase activity (H3-S28 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S28 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S28 specific)","type":"exact"}],"termid":"GO:0044022"}


id: _global:acts_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within","secondary_identifiers":["RO:0002264"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:acts_upstream_of_or_within"}


id: PBO:0073356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family D member 1","termid":"PBO:0073356"}


id: PBO:0060014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 2","termid":"PBO:0060014"}


id: GO:0071412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a genistein stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to genistein","termid":"GO:0033595"},{"relation_name":"is_a","term_name":"cellular response to hydroxyisoflavone","termid":"GO:0071413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to genistein","termid":"GO:0071412"}


id: PBO:0025473
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase deficiency","termid":"PBO:0025473"}


id: PBO:0080932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAZ pseudogene 10","termid":"PBO:0080932"}


id: PBO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 46","termid":"PBO:0050344"}


id: PBO:0053129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactase","termid":"PBO:0053129"}


id: MONDO:0007161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 2","secondary_identifiers":["OMIM:108420","GARD:15041","DOID:0070164","UMLS:C1862459","MEDGEN:400056"],"synonyms":[{"name":"Aspermiogenesis Factor","type":"related"},{"name":"SPGF2","type":"exact"},{"name":"spermatogenic failure 2","type":"exact"}],"termid":"MONDO:0007161","xrefs":{"Monarch":{"xref_id":"0007161"}}}


id: PBO:0005521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp54","termid":"PBO:0005521"}


id: GO:0071239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a streptomycin stimulus. Streptomycin is a commonly used antibiotic in cell culture media which acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to streptomycin","termid":"GO:0046679"},{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to streptomycin","termid":"GO:0071239"}


id: PBO:0071893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 31","termid":"PBO:0071893"}


id: PBO:0029428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_palmitoylation_during_meiosis","termid":"PBO:0029428"}


id: GO:0005519
data:
  {"annotated_genes":["SJAG_04624"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67653],"is_not":false,"summary":null,"term":"GO:0005519"}]},"cv_name":"molecular_function","definition":"Binding to a protein involved in modulating the reorganization of the cytoskeleton.","definition_xrefs":["GOC:go_curators","PMID:15163540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cytoskeletal regulatory protein binding","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0005519","terms_by_termid":{"GO:0005519":null}}


id: GO:0034154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 7.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 7 signaling pathway","synonyms":[{"name":"TLR7 signaling pathway","type":"exact"},{"name":"toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034154"}


id: PBO:0084921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monoacylglycerol and triacylglycerol lipase; MAG lipase with preference for palmitoyl-MAG; TAG lipase involved in TAG catabolism; minor role in medium-chain fatty acid ethyl ester biosynthesis; contains an alpha/beta hydrolase domain and a typical lipase motif (GXSXG); similar to acyltransferases, Eeb1p, Eht1p, and human ABHD1","termid":"PBO:0084921"}


id: MONDO:0005508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bone neoplasm characterized by development of two or more cartilage capped bony outgrowths (osteochondromas) of the long bones.","definition_xrefs":["Orphanet:321"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"exostosis","termid":"MONDO:0002181"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary multiple osteochondromas","secondary_identifiers":["NANDO:2201014","OMIMPS:133700","DOID:206","GARD:7035","NANDO:2200049","NCIT:C5183","NORD:1233","SCTID:254044004","MESH:D005097","SCTID:716742001","icd11.foundation:1578364807","MEDGEN:4612","UMLS:C0015306","NANDO:2201015"],"synonyms":[{"name":"Bessel-Hagen disease","type":"exact"},{"name":"EXT","type":"related"},{"name":"HMO","type":"related"},{"name":"exostoses, multiple","type":"exact"},{"name":"hereditary multiple exostoses","type":"related"},{"name":"hereditary multiple exostoses 1","type":"narrow"},{"name":"hereditary multiple exostoses 2","type":"narrow"},{"name":"hereditary multiple exostoses 3","type":"narrow"},{"name":"hereditary multiple exostosis","type":"related"},{"name":"multiple cartilaginous exostoses","type":"exact"},{"name":"multiple congenital exostosis","type":"exact"},{"name":"multiple exostoses","type":"related"},{"name":"multiple exostosis syndromes","type":"exact"},{"name":"multiple ostechondromas","type":"exact"},{"name":"osteochondromatosis syndrome","type":"exact"},{"name":"osteochondromatosis syndrome (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0005508","xrefs":{"Monarch":{"xref_id":"0005508"}}}


id: FYPO:0007716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tebuconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to tebuconazole","synonyms":[{"name":"resistance to tebuconazole during mitotic cell cycle","type":"related"},{"name":"resistance to tebuconazole during vegetative growth","type":"exact"},{"name":"resistant to tebuconazole","type":"exact"}],"termid":"FYPO:0007716"}


id: MONDO:0022936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de Hauwere Leroy adriaenssens syndrome","secondary_identifiers":["UMLS:C2931078","MESH:C535991","MEDGEN:419709"],"synonyms":[{"name":"iris dysplasia, orbital hypertelorism, and psychomotor retardation","type":"related"}],"termid":"MONDO:0022936","xrefs":{"Monarch":{"xref_id":"0022936"}}}


id: PBO:0080045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 18","termid":"PBO:0080045"}


id: PBO:0035883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ophthalmic_acid_absent_from_cell","termid":"PBO:0035883"}


id: PBO:0030236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_calcium_level","termid":"PBO:0030236"}


id: MONDO:0012154
data:
  {"annotated_genes":["SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86369],"is_not":false,"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"Any myopia in which the cause of the disease is a mutation in the SCO2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:324696","OMIM:608908","UMLS:C1837148","GARD:9937","MESH:C536105"],"synonyms":[{"name":"MYP6","type":"related"},{"name":"SCO2 myopia (disease)","type":"exact"},{"name":"myopia (disease) caused by mutation in SCO2","type":"exact"},{"name":"myopia 6","type":"exact"},{"name":"myopia type 6","type":"exact"},{"name":"myopia, susceptibility to","type":"related"}],"termid":"MONDO:0012154","terms_by_termid":{"MONDO:0012154":null},"xrefs":{"Monarch":{"xref_id":"0012154"}}}


id: GO:0000454
data:
  {"annotated_genes":["SJAG_01234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74839],"is_not":false,"summary":null,"term":"GO:0000454"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of pseudouridylation.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthesis","termid":"GO:0031118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01234":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"snoRNA guided rRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000454","terms_by_termid":{"GO:0000454":null}}


id: GO:0048359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur as part of seed coat development; mucilage is normally synthesized during seed coat development.","definition_xrefs":["GOC:dph","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"},{"relation_name":"part_of","term_name":"seed coat development","termid":"GO:0010214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage metabolic process involved in seed coat development","synonyms":[{"name":"mucilage metabolic process during seed coat development","type":"related"},{"name":"mucilage metabolism during seed coat development","type":"exact"}],"termid":"GO:0048359"}


id: GO:0034131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"regulation of TLR1 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034131"}


id: GO:0031451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:dph","GOC:ef","GOC:mah","GOC:mtg_muscle","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of slow-twitch skeletal muscle fiber contraction","termid":"GO:0031449"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"},{"relation_name":"positively_regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"activation of slow-twitch skeletal muscle contraction","type":"narrow"},{"name":"positive regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"stimulation of slow-twitch skeletal muscle contraction","type":"narrow"},{"name":"up regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"up-regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"upregulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031451"}


id: PBO:0048371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAR1 ribonucleoprotein","termid":"PBO:0048371"}


id: PBO:0029379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV","termid":"PBO:0029379"}


id: PBO:0001284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Ebp2 (predicted)","termid":"PBO:0001284"}


id: PBO:0082170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent proline methyltransferase; catalyzes the dimethylation of ribosomal proteins Rpl12 and Rps25 at N-terminal proline residues; has a role in protein synthesis; fusion protein localizes to the cytoplasm","termid":"PBO:0082170"}


id: PBO:0031003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ethanol","termid":"PBO:0031003"}


id: GO:0016136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saponin metabolic process","termid":"GO:0016134"},{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"saponin catabolic process","synonyms":[{"name":"saponin breakdown","type":"exact"},{"name":"saponin catabolism","type":"exact"},{"name":"saponin degradation","type":"exact"}],"termid":"GO:0016136"}


id: GO:1900953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 18-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"18-methylnonadec-1-ene metabolic process","termid":"GO:1900880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of 18-methylnonadec-1-ene metabolic process","synonyms":[{"name":"regulation of 18-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900953"}


id: PBO:0050831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia up-regulated 1","termid":"PBO:0050831"}


id: PBO:0089399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B dimer chaperone Chz1","termid":"PBO:0089399"}


id: GO:0043303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome localization","termid":"GO:0032418"},{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"},{"relation_name":"part_of","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"},{"relation_name":"part_of","term_name":"mast cell mediated immunity","termid":"GO:0002448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"mast cell degranulation","synonyms":[{"name":"mast cell granule exocytosis","type":"exact"}],"termid":"GO:0043303"}


id: FYPO:0000662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified catalytic activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased catalytic activity","termid":"FYPO:0000662"}


id: PBO:0034381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_synthesis_of","termid":"PBO:0034381"}


id: FYPO:0002451
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable and cell shape is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable vegetative cell with abnormal cell shape","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable vegetative cell with abnormal cell shape during mitotic cell cycle","type":"related"},{"name":"inviable, abnormal cell shape during vegetative growth","type":"exact"},{"name":"lethal; vegetative cell with abnormal cell shape","type":"exact"}],"termid":"FYPO:0002451","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0014612
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpb3 was previously considered to be SPAC17G8.03c but this new gene product appears to be the true ortholog of DPB3/POLE4 see TreeFam:TF103009","termid":"PBO:0014612"}


id: GO:0033072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of vancomycin, (3S,6R,7R,11R,23S,26S,30aS,36R,38aR)-44-[2-O-(3-amino-2,3,6-trideoxy-3-C-methyl-alpha-L-lyxo-hexopyranosyl)-beta-D-glucopyranosyloxy]-3-(carbamoylmethyl)-10,19-dichloro-2,3,4,5,6,7,23,25,26,36,37,38,38a-tetradecahydro-7,22,28,30,32-pentahydroxy-6-(N-methyl-D-leucyl)-2,5,24,38,39-pentaoxo-1H,22H-23,36-(epiminomethano)-8,11:18,21-dietheno-13,16:31,35-di(metheno)[1,6,9]oxadiazacyclohexadecino[4,5-m][10,2,16]benzoxadiazacyclotetracosine-26-carboxylic acid, a complex glycopeptide from Streptomyces orientalis that inhibits a specific step in the synthesis of the peptidoglycan layer in Gram-positive bacteria.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"},{"relation_name":"is_a","term_name":"peptide antibiotic biosynthetic process","termid":"GO:0030651"},{"relation_name":"is_a","term_name":"vancomycin metabolic process","termid":"GO:0033071"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vancomycin biosynthetic process","synonyms":[{"name":"vancomycin anabolism","type":"exact"},{"name":"vancomycin biosynthesis","type":"exact"},{"name":"vancomycin formation","type":"exact"},{"name":"vancomycin synthesis","type":"exact"}],"termid":"GO:0033072"}


id: FYPO:0001424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to nucleus during vegetative growth","synonyms":[{"name":"abolished protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during mitotic cell cycle","type":"related"},{"name":"nuclear exclusion during vegetative growth","type":"related"},{"name":"nuclear protein exclusion during vegetative growth","type":"related"},{"name":"protein localization to nucleus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001424"}


id: PBO:0081511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 417","termid":"PBO:0081511"}


id: PBO:0030111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ethionine","termid":"PBO:0030111"}


id: MONDO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the hair follicles, sebaceous glands, or sweat glands.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"skin appendage disorder","termid":"MONDO:0024481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermal appendage tumor","secondary_identifiers":["DOID:2433","NCIT:C4463","UMLS:C0345988","ICD9:239.2","MEDGEN:87527","SCTID:126489007"],"synonyms":[{"name":"Epidermal appendage neoplasm","type":"exact"},{"name":"Epidermal appendage tumor","type":"exact"},{"name":"Epidermal appendage tumour","type":"exact"},{"name":"adnexal neoplasm of skin","type":"exact"},{"name":"adnexal neoplasm of the skin","type":"exact"},{"name":"adnexal tumor of skin","type":"exact"},{"name":"adnexal tumor of the skin","type":"exact"},{"name":"adnexal tumour of skin","type":"exact"},{"name":"adnexal tumour of the skin","type":"exact"},{"name":"cutaneous adnexal neoplasm","type":"exact"},{"name":"cutaneous appendage neoplasm","type":"exact"},{"name":"cutaneous appendage neoplasm (disease)","type":"exact"},{"name":"cutaneous appendage tumor","type":"exact"},{"name":"cutaneous appendage tumour","type":"exact"},{"name":"neoplasm of Epidermal appendage","type":"exact"},{"name":"neoplasm of cutaneous appendage","type":"exact"},{"name":"neoplasm of skin appendage","type":"exact"},{"name":"neoplasm of skin with adnexal differentiation","type":"exact"},{"name":"neoplasm of the skin appendage","type":"exact"},{"name":"skin appendage neoplasm","type":"exact"},{"name":"skin appendage tumor","type":"exact"},{"name":"skin appendage tumour","type":"exact"},{"name":"tumor of Epidermal appendage","type":"exact"},{"name":"tumor of cutaneous appendage","type":"exact"},{"name":"tumor of skin appendage","type":"exact"},{"name":"tumor of the skin appendage","type":"exact"},{"name":"tumour of Epidermal appendage","type":"exact"},{"name":"tumour of cutaneous appendage","type":"exact"},{"name":"tumour of skin appendage","type":"exact"},{"name":"tumour of the skin appendage","type":"exact"}],"termid":"MONDO:0002297","xrefs":{"Monarch":{"xref_id":"0002297"}}}


id: PR:O94617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uap1 gene.","definition_xrefs":["UniProtKB:O94617","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.08","synonyms":[{"name":"Spom972h-uap1","type":"exact"}],"termid":"PR:O94617"}


id: FYPO:0005696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from the interphase microtubule organizing center does not occur. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PomBase:mah","PMID:19001497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cytoplasmic interphase microtubule nucleation","termid":"FYPO:0004766"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule nucleation from iMTOC","synonyms":[{"name":"abolished cytoplasmic interphase microtubule nucleation from iMTOC","type":"exact"},{"name":"abolished cytoplasmic microtubule nucleation from iMTOC during mitotic interphase","type":"exact"},{"name":"abolished interphase cytoplasmic microtubule nucleation from iMTOC","type":"exact"},{"name":"abolished interphase microtubule nucleation from iMTOC during mitotic cell cycle","type":"exact"},{"name":"abolished interphase microtubule nucleation from iMTOC during vegetative growth","type":"exact"},{"name":"abolished microtubule nucleation from interphase microtubule organizing center","type":"exact"},{"name":"abolished microtubule nucleation from interphase microtubule organizing centre","type":"exact"},{"name":"cytoplasmic microtubule nucleation from iMTOC abolished","type":"exact"}],"termid":"FYPO:0005696"}


id: PBO:0086091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase required for mitotic exit; required for rDNA segregation, cytokinesis, meiosis I spindle disassembly, environmental stress response; held in nucleolus by Cdc55p in early meiosis, liberated by FEAR and Mitotic Exit Network in anaphase, enabling it to effect a decrease in CDK/B-cyclin activity and mitotic exit; sequestered in metaphase II, released upon entry into anaphase II; human homolog CDC14A can complement thermosensitivity of yeast cdc14-1 mutant","termid":"PBO:0086091"}


id: PBO:0072339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 25","termid":"PBO:0072339"}


id: MONDO:0033115
data:
  {"annotated_genes":["SJAG_00059"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85750],"is_not":false,"summary":null,"term":"MONDO:0033115"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 25","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080259","MEDGEN:1618081","UMLS:C4539808","OMIM:617584"],"synonyms":[{"name":"SCAR25","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia 25","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive 25","type":"exact"}],"termid":"MONDO:0033115","terms_by_termid":{"MONDO:0033115":null},"xrefs":{"Monarch":{"xref_id":"0033115"}}}


id: GO:0035740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a CD8-positive, alpha-beta T cell population by cell division.","definition_xrefs":["CL:0000625","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell activation","termid":"GO:0036037"},{"relation_name":"is_a","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}


id: SO:0000998
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recursive splice site is a splice site which subdivides a large intron. Recursive splicing is a mechanism that splices large introns by sub dividing the intron at non exonic elements and alternate exons.","direct_ancestors":[{"relation_name":"is_a","term_name":"cis_splice_site","termid":"SO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recursive_splice_site","synonyms":[{"name":"recursive splice site","type":"exact"}],"termid":"SO:0000998"}


id: GO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of central B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of central tolerance induction","termid":"GO:0002647"},{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of central B cell tolerance induction","termid":"GO:0002895"},{"relation_name":"negatively_regulates","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of central B cell tolerance induction","synonyms":[{"name":"down regulation of central B cell tolerance induction","type":"exact"},{"name":"down-regulation of central B cell tolerance induction","type":"exact"},{"name":"downregulation of central B cell tolerance induction","type":"exact"},{"name":"inhibition of central B cell tolerance induction","type":"narrow"}],"termid":"GO:0002896"}


id: PBO:0045932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFHD2 antisense RNA 1","termid":"PBO:0045932"}


id: PBO:0085133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein of unknown function; positive regulator of mitotic exit; involved in regulating release of Cdc14p from the nucleolus in early anaphase, may play similar role in meiosis; SPO12 has a paralog, BNS1, that arose from the whole genome duplication","termid":"PBO:0085133"}


id: MONDO:0005780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any infection caused by a virus of the genus Hantavirus, which is transmitted by aerosolized rodent excreta or rodent bites, that can result in a variety of clinical manifestations from hemorrhagic fever with renal syndrome to a pulmonary syndrome.","definition_xrefs":["NCIT:C3899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bunyaviridae infectious disease","termid":"MONDO:0021641"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hantavirus infectious disease","secondary_identifiers":["EFO:0007295","ICD9:079.81","MESH:D018778","MEDGEN:67028","SCTID:359761005","UMLS:C0242994","MONDO:0042492"],"synonyms":[{"name":"Hantavirus caused disease or disorder","type":"exact"},{"name":"Hantavirus disease or disorder","type":"exact"},{"name":"Hantavirus infection","type":"exact"},{"name":"Hantavirus infectious disease","type":"exact"},{"name":"disease caused by hantavirus","type":"related"},{"name":"disease due to hantavirus","type":"exact"},{"name":"infections, Hantavirus","type":"related"}],"termid":"MONDO:0005780","xrefs":{"Monarch":{"xref_id":"0005780"}}}


id: GO:0072246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric glomerular parietal epithelial cell over time, from its formation to the mature structure. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell development","termid":"GO:0072016"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell development","termid":"GO:0072313"},{"relation_name":"part_of","term_name":"metanephric glomerular parietal epithelial cell differentiation","termid":"GO:0072245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular parietal epithelial cell development","synonyms":[{"name":"metanephric Bowman's capsule development","type":"exact"}],"termid":"GO:0072246"}


id: PBO:0061847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OLA1 pseudogene 1","termid":"PBO:0061847"}


id: GO:0052009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell envelope","termid":"GO:0098933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cell wall","synonyms":[{"name":"disassembly by symbiont of host cell wall","type":"exact"},{"name":"disruption by symbiont of host cell wall","type":"exact"}],"termid":"GO:0052009"}


id: PBO:0083900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fimbrin, actin-bundling protein; cooperates with Scp1p in organization and maintenance of the actin cytoskeleton; phosphorylated by Cdc28p/Clb2p in metaphase on T103, to regulate conformation, and modulate actin filament binding affinity and actin cable dynamics; relocalizes from the plasma membrane to the cytoplasm upon DNA replication stress; human homologs PLS3 and LCP1 implicated in spinocerebellar ataxia type 2 (SCA2) can each complement yeast null mutant","termid":"PBO:0083900"}


id: GO:0021573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 7 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","GOC:jid","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 development","termid":"GO:0021573"}


id: MONDO:0011660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYO6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 22","secondary_identifiers":["GARD:9167","MEDGEN:419894","OMIM:606346","DOID:0110552","MESH:C538197","UMLS:C2931767"],"synonyms":[{"name":"DFNA 22","type":"related"},{"name":"DFNA22","type":"narrow"},{"name":"MYO6 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 22","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 22","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYO6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 22","type":"narrow"},{"name":"deafness, autosomal dominant 22","type":"narrow"},{"name":"deafness, autosomal dominant 22, with hypertrophic cardiomyopathy","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 22","type":"narrow"},{"name":"deafness, autosomal dominant type 22","type":"narrow"}],"termid":"MONDO:0011660","xrefs":{"Monarch":{"xref_id":"0011660"}}}


id: PBO:0044959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 4 like 1 (pseudogene)","termid":"PBO:0044959"}


id: GO:0036294
data:
  {"annotated_genes":["SJAG_03345","SJAG_00642","SJAG_01585","SJAG_01150","SJAG_04018","SJAG_00221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112041,117314,101542,110175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[116719,89584],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"},{"relation_name":"is_a","term_name":"cellular response to oxygen levels","termid":"GO:0071453"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01585":null,"SJAG_03345":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to decreased oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to lowered oxygen levels","type":"exact"}],"termid":"GO:0036294","terms_by_termid":{"GO:0071456":null,"GO:1900039":null}}


id: PBO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative splicing possible. Evidence of transcript missing final intron","termid":"PBO:0001642"}


id: PBO:0038964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomedullin 5 (putative)","termid":"PBO:0038964"}


id: PBO:0062938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 3","termid":"PBO:0062938"}


id: PBO:0109356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR choline and putative heme transporter 2","termid":"PBO:0109356"}


id: PR:Q10109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lem2 gene.","definition_xrefs":["UniProtKB:Q10109","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lap-Emerin-Man domain protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.10","synonyms":[{"name":"LEM domain protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lem2","type":"exact"}],"termid":"PR:Q10109"}


id: GO:1901449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to butan-1-ol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"is_a","term_name":"regulation of response to butan-1-ol","termid":"GO:1901448"},{"relation_name":"negatively_regulates","term_name":"response to butan-1-ol","termid":"GO:1901422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to butan-1-ol","synonyms":[{"name":"down regulation of response to butan-1-ol","type":"exact"},{"name":"down-regulation of response to butan-1-ol","type":"exact"},{"name":"downregulation of response to butan-1-ol","type":"exact"},{"name":"inhibition of response to butan-1-ol","type":"narrow"}],"termid":"GO:1901449"}


id: GO:0018855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetate + ATP + CoA = AMP + diphosphate + 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA synthetase activity","secondary_identifiers":["EC:6.2.1.38","RHEA:33419"],"termid":"GO:0018855"}


id: MONDO:0013352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-severe speech delay-mild dysmorphism syndrome, also known as intellectual disability with language impairment and with or without autistic features, is adisorder characterized by global developmental delay with moderate to severe speech delay thataffects expressive speech. Most patients have difficulty articulating words. Common signs and symptoms include broad forehead, downslanting palpebral fissures, short nose with broad tip, head appearing too large for the body, frontal hair upsweep, and bulging digit pads anddelatyed gross motor skills. Some patients have autistic features and/or behavioral problems. Congenital malformations may be associated. All reported cases have occurred de novo (without any cases in the family). It is caused by alterations (mutations) in the caused by heterozygous mutation in the FOXP1 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-severe speech delay-mild dysmorphism syndrome","secondary_identifiers":["UMLS:C4013764","GARD:12501","OMIM:613670","Orphanet:391372","DOID:0111331","MEDGEN:862201"],"synonyms":[{"name":"FOXP1 related global developmental delay, intellectual disability and speech defects","type":"related"},{"name":"intellectual disability with language impairment and with or without autistic features","type":"related"},{"name":"intellectual disability-severe speech delay-mild dysmorphism syndrome","type":"exact"},{"name":"mental retardation with language impairment and with or without autistic features","type":"related"}],"termid":"MONDO:0013352","xrefs":{"Monarch":{"xref_id":"0013352"}}}


id: PBO:0082659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT transcriptional complex; CCR4-NOT is involved in regulation of gene expression; component of the major cytoplasmic deadenylase, which is involved in mRNA poly(A) tail shortening","termid":"PBO:0082659"}


id: GO:1902998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neurofibrillary tangle assembly.","definition_xrefs":["PMID:15897157","GO_REF:0000058","GOC:sjp","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inclusion body assembly","termid":"GO:0090261"},{"relation_name":"is_a","term_name":"regulation of neurofibrillary tangle assembly","termid":"GO:1902996"},{"relation_name":"positively_regulates","term_name":"neurofibrillary tangle assembly","termid":"GO:1902988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurofibrillary tangle assembly","synonyms":[{"name":"activation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"activation of neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of neurofibrillary tangle formation","type":"narrow"},{"name":"activation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"positive regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"positive regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"positive regulation of neurofibrillary tangle formation","type":"exact"},{"name":"positive regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"positive regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"up regulation of neurofibrillary tangle formation","type":"exact"},{"name":"up regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up-regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up-regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up-regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"up-regulation of neurofibrillary tangle formation","type":"exact"},{"name":"up-regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up-regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"upregulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"upregulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"upregulation of neurofibrillary tangle assembly","type":"exact"},{"name":"upregulation of neurofibrillary tangle formation","type":"exact"},{"name":"upregulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"upregulation of star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902998"}


id: MONDO:0850073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic unicoronal craniosynostosis","secondary_identifiers":["Orphanet:620102","GARD:22470","UMLS:C5680401","MEDGEN:1842408"],"termid":"MONDO:0850073","xrefs":{"Monarch":{"xref_id":"0850073"}}}


id: MONDO:0100153
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"}]},"cv_name":"mondo","definition":"A nervous system disorder characterized by complex cortical malformations including in most cases dysmorphic basal ganglia and/or corpus callosum in which the cause of the disease is a variation in a tubulin gene.","definition_xrefs":["DOID:0112227","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"tubulinopathy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100153","terms_by_termid":{"MONDO:0010912":null},"xrefs":{"Monarch":{"xref_id":"0100153"}}}


id: PBO:0091137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L30","termid":"PBO:0091137"}


id: MONDO:0001585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A substance abuse that involves the recurring use of hallucinogenic drugs despite negative consequences.","definition_xrefs":["DOID:12797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance abuse","termid":"MONDO:0002491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hallucinogen abuse","secondary_identifiers":["ICD9:305.3","MEDGEN:507771","SCTID:74851005","UMLS:C0018526"],"termid":"MONDO:0001585","xrefs":{"Monarch":{"xref_id":"0001585"}}}


id: PBO:0058283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4659b","termid":"PBO:0058283"}


id: GO:1901276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tartrate.","definition_xrefs":["GOC:yaf","UniPathway:UPA00839","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"tartrate metabolic process","termid":"GO:1901275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tartrate catabolic process","synonyms":[{"name":"tartrate breakdown","type":"exact"},{"name":"tartrate catabolism","type":"exact"},{"name":"tartrate degradation","type":"exact"}],"termid":"GO:1901276"}


id: GO:0034340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a type I interferon stimulus. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["ISBN:0126896631","PMID:16681834","PMID:15546383","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"},{"relation_name":"part_of","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to type I interferon","synonyms":[{"name":"response to type I IFN","type":"exact"}],"termid":"GO:0034340"}


id: PBO:0067846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 148","termid":"PBO:0067846"}


id: GO:0060073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of body fluids process in which parasympathetic nerves stimulate the bladder wall muscle to contract and expel urine from the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"micturition","secondary_identifiers":["Wikipedia:Urination"],"synonyms":[{"name":"urination","type":"exact"},{"name":"urine voiding","type":"exact"}],"termid":"GO:0060073"}


id: PBO:0058444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5009","termid":"PBO:0058444"}


id: PBO:0000646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase family","termid":"PBO:0000646"}


id: GO:0008881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate = D-glutamate.","definition_xrefs":["RHEA:12813","EC:5.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamate racemase activity","secondary_identifiers":["KEGG_REACTION:R00260","MetaCyc:GLUTRACE-RXN"],"termid":"GO:0008881"}


id: PBO:0062263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily E member 1 pseudogene","termid":"PBO:0062263"}


id: PBO:0066706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 3","termid":"PBO:0066706"}


id: GO:0035627
data:
  {"annotated_genes":["SJAG_04413","SJAG_03690","SJAG_01437","SJAG_00176","SJAG_01116","SJAG_00355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74611,109944,117843,73231,73676,73890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"}]},"cv_name":"biological_process","definition":"The directed movement of ceramides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ceramides are a class of lipid composed of sphingosine linked to a fatty acid.","definition_xrefs":["GOC:sart","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00355":null,"SJAG_01116":null,"SJAG_01437":null,"SJAG_03690":null,"SJAG_04413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ceramide transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9845576"],"termid":"GO:0035627","terms_by_termid":{"GO:0035621":null}}


id: PBO:0027501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_FR901464","termid":"PBO:0027501"}


id: GO:0047570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxoadipate enol-lactone + H2O = 3-oxoadipate.","definition_xrefs":["EC:3.1.1.24","MetaCyc:3-OXOADIPATE-ENOL-LACTONASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"3-oxoadipate enol-lactonase activity","secondary_identifiers":["RHEA:10184"],"synonyms":[{"name":"3-ketoadipate enol-lactonase activity","type":"related"},{"name":"3-oxoadipic enol-lactone hydrolase activity","type":"related"},{"name":"4-carboxymethylbut-3-en-4-olide enol-lactonohydrolase activity","type":"related"},{"name":"beta-ketoadipate enol-lactone hydrolase activity","type":"related"},{"name":"beta-ketoadipic enol-lactone hydrolase activity","type":"related"},{"name":"carboxymethylbutenolide lactonase activity","type":"related"}],"termid":"GO:0047570"}


id: GO:0141046
data:
  {"annotated_genes":["SJAG_01561"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79064],"is_not":false,"summary":null,"term":"GO:0141046"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of an Atg8 family modifier from one protein to a phosphatidylethanolamine or phosphatidylserine on a membrane, via the reaction X-Atg8 + Y = Y-Atg8 + X.","definition_xrefs":["PMID:33909989","PMID:11100732","PMID:28234446","PMID:17986448","PMID:18704115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01561":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0019787","GO:0140096","GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"Atg8-family conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"APG8 conjugating enzyme activity","type":"exact"},{"name":"Atg8 conjugating enzyme activity","type":"narrow"},{"name":"Atg8-like conjugating activity","type":"exact"},{"name":"E2","type":"broad"}],"termid":"GO:0141046","terms_by_termid":{"GO:0141046":null}}


id: PBO:0113509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p, inactivating the osmosensing MAPK cascade; involved in Fus3p activation during pheromone response; deletion affects precursor tRNA splicing, mitochondrial inheritance, and sporulation; involved in myosin-V dependent inheritance of mitochondria, peroxisomes, vacuoles and secretory vesicles; localizes to the nucleus, cytoplasm and peroxisomes","termid":"PBO:0113509"}


id: MONDO:0002525
data:
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id: PBO:0090970
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id: FYPO:0003849
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id: GO:0019864
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id: PBO:0075416
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id: PBO:0001476
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id: FYPO:0002714
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id: PBO:0044790
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id: PBO:0091069
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id: SO:0001034
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id: PBO:0000483
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id: PBO:0091452
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id: PBO:0085807
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id: PBO:0075049
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id: PR:Q9HGN4
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id: PBO:0072705
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id: MOD:01474
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id: PBO:0027668
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id: MONDO:0015010
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id: PBO:0085034
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id: PR:O74921
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id: PBO:0085238
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id: GO:0003313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the heart rudiment over time, from its initial formation to the mature structure. The heart rudiment is a cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart rudiment development","synonyms":[{"name":"heart cone development","type":"exact"}],"termid":"GO:0003313"}


id: GO:0006608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a small nuclear ribonucleoprotein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNP protein import into nucleus (obsolete GO:0006608)","synonyms":[{"name":"snRNP protein import into cell nucleus","type":"exact"},{"name":"snRNP protein transport from cytoplasm to nucleus","type":"exact"},{"name":"snRNP protein-nucleus import","type":"exact"}],"termid":"GO:0006608"}


id: PBO:0082840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of the TIM23 complex; proposed alternatively to be a component of the import motor (PAM complex) or to interact with and modulate the core TIM23 (Translocase of the Inner mitochondrial Membrane) complex; protein abundance increases in response to DNA replication stress","termid":"PBO:0082840"}


id: MONDO:0008785
data:
  {"annotated_genes":["SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86702],"is_not":false,"summary":null,"term":"MONDO:0008785"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive sideroblastic anemia","termid":"MONDO:0016828"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0006025"],"is_obsolete":false,"name":"sideroblastic anemia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567145","UMLS:C4225425","DOID:0060065","GARD:18381","OMIM:205950","MEDGEN:899109"],"synonyms":[{"name":"SIDBA2","type":"related"},{"name":"anemia, sideroblastic, 2, pyridoxine-refractory","type":"related"},{"name":"anemia, sideroblastic, pyridoxine-refractory, autosomal recessive","type":"related"},{"name":"pyridoxine refractory sideroblastic anaemia","type":"related"},{"name":"pyridoxine refractory sideroblastic anemia","type":"related"},{"name":"sideroblastic anaemia pyridoxine-refractory autosomal recessive","type":"related"},{"name":"sideroblastic anemia pyridoxine-refractory autosomal recessive","type":"related"}],"termid":"MONDO:0008785","terms_by_termid":{"MONDO:0008785":null},"xrefs":{"Monarch":{"xref_id":"0008785"}}}


id: PR:O13881
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic loci regulator 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.17","synonyms":[{"name":"Spom972h-clr2","type":"exact"}],"termid":"PR:O13881"}


id: GO:0090226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a Ran GTPase relays a signal resulting in the modulation of the rate, frequency or extent of microtubule nucleation.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule nucleation by Ran protein signal transduction (obsolete GO:0090226)","termid":"GO:0090226"}


id: GO:0044419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process evolved to enable an interaction with an organism of a different species.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in interspecies interaction between organisms","secondary_identifiers":["Reactome:R-HSA-9824443"],"synonyms":[{"name":"interaction with another species","type":"exact"},{"name":"interspecies interaction","type":"exact"},{"name":"interspecies interaction between organisms","type":"exact"},{"name":"interspecies interaction with other organisms","type":"exact"}],"termid":"GO:0044419"}


id: PBO:0069658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 935, pseudogene","termid":"PBO:0069658"}


id: GO:0043795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + D-glyceraldehyde + H2O = (R)-glycerate + AH2 + H+.","definition_xrefs":["PMID:10095793","RHEA:36047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glyceraldehyde oxidoreductase activity","secondary_identifiers":["EC:1.2.99.8"],"termid":"GO:0043795"}


id: PBO:0074472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin like 1","termid":"PBO:0074472"}


id: FYPO:0004566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to caffeine during the second meiotic nuclear division. Cells stop growing (and may die) at a concentration of caffeine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to caffeine during meiosis II","synonyms":[{"name":"hypersensitive to caffeine during meiosis II","type":"exact"},{"name":"sensitive to caffeine during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004566"}


id: PR:O14048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UBX domain-containing protein 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.15c","secondary_identifiers":["UniProtKB:O14048"],"synonyms":[{"name":"Spom972h-UBXN7","type":"exact"}],"termid":"PR:O14048"}


id: GO:1900655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"regulation of diorcinol biosynthetic process","synonyms":[{"name":"regulation of diorcinol anabolism","type":"exact"},{"name":"regulation of diorcinol biosynthesis","type":"exact"},{"name":"regulation of diorcinol formation","type":"exact"},{"name":"regulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900655"}


id: GO:0006049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-N-acetylglucosamine metabolic process","termid":"GO:0006047"},{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine catabolic process","synonyms":[{"name":"UDP-N-acetylglucosamine breakdown","type":"exact"},{"name":"UDP-N-acetylglucosamine catabolism","type":"exact"},{"name":"UDP-N-acetylglucosamine degradation","type":"exact"}],"termid":"GO:0006049"}


id: PBO:0113024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium/H+ antiporter localized to endoplasmic reticulum membrane; member of calcium exchanger (CAX) family; targeted to vacuole via AP-3 pathway","termid":"PBO:0113024"}


id: FYPO:0000282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype observed in the vegetative growth phase of the life cycle in which a cell is able to survive at a high temperature.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable cell at high temperature (obsolete FYPO:0000282)","synonyms":[{"name":"cell viable at high temperature","type":"exact"},{"name":"viable cell at high temperature during mitotic cell cycle","type":"related"},{"name":"viable cell at high temperature during vegetative growth","type":"exact"}],"termid":"FYPO:0000282"}


id: PR:O14181
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L28, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.05c","synonyms":[{"name":"Spom972h-mrpl28","type":"exact"}],"termid":"PR:O14181"}


id: PBO:0055088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2506","termid":"PBO:0055088"}


id: GO:0030716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an oocyte cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte fate determination","synonyms":[{"name":"oocyte cell fate determination","type":"exact"}],"termid":"GO:0030716"}


id: MONDO:0004694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatopulmonary syndrome (HPS) is a lung disease characterized by widening of arteries and veins (dilatation) in the lungs in people who have chronic liver disease. Because of the dilated vases, the workload of the heart increases and the blood pumped to the body does not have enough oxygen, leading to a decreased level of oxygen in the blood (hypoxemia). The normal diameter of the lung vessels ranges between 8 and 15 μm whereas when in HPS rises to between 15 and 500 μm. While many people with HPS don't have any obvious problems, the main reported symptom is shortness of breath (dyspnea) that is worse when standing or sitting up, and is relieved when lying down (platypnea). Symptoms related to chronic liver disease (generally cirrhosis) include small red spots on the skin (spider angiomas) and abnormal vascular dilatations. Some other symptoms that have been described are infections in the brain (brain abscesses), brain bleeding and an increased number of red blood cells in the blood (polycythemia). There is currently no effective medication for HPS. Oxygen therapy may improve the breathing in some cases. Liver transplant is an efficient treatment which improves the symptoms, even in severe cases.","direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatopulmonary syndrome","secondary_identifiers":["MEDGEN:109071","EFO:1001346","SCTID:371067004","MESH:D020065","UMLS:C0600452","ICD10CM:K76.81","DOID:900","icd11.foundation:866605228","ICD9:573.5","ICD9:417.8"],"termid":"MONDO:0004694","xrefs":{"Monarch":{"xref_id":"0004694"}}}


id: PBO:0038475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 13","termid":"PBO:0038475"}


id: GO:1903370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of foraging behavior.","definition_xrefs":["PMID:8677262","GO_REF:0000058","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of foraging behavior","termid":"GO:1903368"},{"relation_name":"positively_regulates","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of foraging behavior","synonyms":[{"name":"activation of foraging behavior","type":"narrow"},{"name":"up regulation of foraging behavior","type":"exact"},{"name":"up-regulation of foraging behavior","type":"exact"},{"name":"upregulation of foraging behavior","type":"exact"}],"termid":"GO:1903370"}


id: PBO:0047997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXM1-regulated, gastric cancer associated","termid":"PBO:0047997"}


id: FYPO:0006923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the frequency of DNA recombination is normal (i.e. indistinguishable from wild type) at DNA replication fork barriers.","definition_xrefs":["PMID:31149897","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA recombination frequency at mitotic DNA replication fork barriers","synonyms":[{"name":"normal DNA recombination frequency at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"normal DNA recombination frequency at mitotic DNA replication fork barriers during vegetative growth","type":"exact"}],"termid":"FYPO:0006923"}


id: PBO:0031347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_enfumafungin","termid":"PBO:0031347"}


id: MOD:01072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one potassium atom for one hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium containing modified residue","termid":"MOD:00849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopotassium salt","synonyms":[{"name":"K1Res","type":"exact"}],"termid":"MOD:01072"}


id: GO:0016215
data:
  {"annotated_genes":["SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004768"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + reduced acceptor + O2 = desaturated-acyl-CoA + acceptor + 2 H2O.","definition_xrefs":["PMID:36017969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acyl-CoA desaturase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"CoA desaturase activity","type":"broad"}],"termid":"GO:0016215","terms_by_termid":{"GO:0004768":null}}


id: PBO:0049569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 6","termid":"PBO:0049569"}


id: GO:2000617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K9 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 acetylation (obsolete GO:2000617)","synonyms":[{"name":"positive regulation of histone H3 acetylation at K9","type":"exact"},{"name":"positive regulation of histone H3K9 acetylation","type":"exact"}],"termid":"GO:2000617"}


id: GO:0018782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-3-chloroacrylic acid + H2O = H+ + HCl + malonate semialdehyde.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-chloroacrylic acid dehalogenase activity (obsolete GO:0018782)","termid":"GO:0018782"}


id: PATO:0000482
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000482 response value (obsolete PATO:0000482)","termid":"PATO:0000482"}


id: GO:2000858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aldosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mineralocorticoid secretion","termid":"GO:2000855"},{"relation_name":"regulates","term_name":"aldosterone secretion","termid":"GO:0035932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of aldosterone secretion","termid":"GO:2000858"}


id: MONDO:0020790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gaze palsy with progressive scoliosis","termid":"MONDO:0011810"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gaze palsy, familial horizontal, with progressive scoliosis 1","secondary_identifiers":["UMLS:C4551964","MEDGEN:1647423","OMIM:607313"],"synonyms":[{"name":"HGPPS","type":"exact"},{"name":"HGPPS1","type":"exact"},{"name":"Ophthalmoplegia, Progressive External, and Scoliosis","type":"related"},{"name":"gaze palsy, familial horizontal, with progressive scoliosis 1","type":"exact"},{"name":"gaze palsy, familial horizontal, with progressive scoliosis, 1","type":"exact"}],"termid":"MONDO:0020790","xrefs":{"Monarch":{"xref_id":"0020790"}}}


id: PBO:0055277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2704","termid":"PBO:0055277"}


id: GO:0051055
data:
  {"annotated_genes":["SJAG_03130","SJAG_01906","SJAG_01187","SJAG_03940","SJAG_03170","SJAG_02380","SJAG_00053","SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90736,104694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[94206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[71200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[111701,115810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[113077,110054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"negatively_regulates","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01187":null,"SJAG_01906":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_03130":null,"SJAG_03170":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of lipid biosynthetic process","type":"exact"},{"name":"down-regulation of lipid biosynthetic process","type":"exact"},{"name":"downregulation of lipid biosynthetic process","type":"exact"},{"name":"inhibition of lipid biosynthetic process","type":"narrow"},{"name":"negative regulation of lipid anabolism","type":"exact"},{"name":"negative regulation of lipid biosynthesis","type":"exact"},{"name":"negative regulation of lipid formation","type":"exact"},{"name":"negative regulation of lipid synthesis","type":"exact"},{"name":"negative regulation of lipogenesis","type":"exact"}],"termid":"GO:0051055","terms_by_termid":{"GO:0010895":null,"GO:0045717":null,"GO:0071072":null,"GO:1902647":null,"GO:2001211":null}}


id: PBO:0058395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4767","termid":"PBO:0058395"}


id: FYPO:0002390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid cohesion is the process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle.","definition_xrefs":["GO:0007064","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic sister chromatid cohesion","synonyms":[{"name":"normal mitotic chromosome cohesion","type":"exact"},{"name":"normal mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal sister chromatid cohesion during mitosis","type":"exact"},{"name":"normal sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002390"}


id: MONDO:0006899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the gingiva surrounding the crown of a tooth.","definition_xrefs":["MESH:D010497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival disorder","termid":"MONDO:0002021"},{"relation_name":"is_a","term_name":"periodontitis","termid":"MONDO:0005076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericoronitis","secondary_identifiers":["EFO:1001098","icd11.foundation:1764886525","MedDRA:10034504","DOID:3671","MEDGEN:45399","SCTID:22240003","UMLS:C0031055"],"termid":"MONDO:0006899","xrefs":{"Monarch":{"xref_id":"0006899"}}}


id: PBO:0057974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689f","termid":"PBO:0057974"}


id: PBO:0044574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine beta-hydroxylase","termid":"PBO:0044574"}


id: PR:Q9UUE0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17G9.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUE0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0655 protein C17G9.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.12c","synonyms":[{"name":"Spom972h-SPBC17G9.12c","type":"exact"}],"termid":"PR:Q9UUE0"}


id: PBO:0064769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 1","termid":"PBO:0064769"}


id: PBO:0066225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 28","termid":"PBO:0066225"}


id: GO:0030896
data:
  {"annotated_genes":["SJAG_01605","SJAG_02771","SJAG_03026"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73234,74233,79136],"is_not":false,"summary":null,"term":"GO:0030896"}]},"cv_name":"cellular_component","definition":"Conserved heterotrimeric complex of PCNA-like proteins that is loaded onto DNA at sites of DNA damage.","definition_xrefs":["PMID:12531008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01605":null,"SJAG_02771":null,"SJAG_03026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"checkpoint clamp complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"CCC","type":"exact"},{"name":"Rad9-Hus1-Rad1 (9-1-1) clamp complex","type":"exact"}],"termid":"GO:0030896","terms_by_termid":{"GO:0030896":null}}


id: PR:P31317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ornithine carbamoyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine carbamoyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.10","secondary_identifiers":["UniProtKB:P31317"],"synonyms":[{"name":"OTCase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-OTC","type":"exact"},{"name":"ornithine transcarbamylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P31317"}


id: SO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed pseudogene where there is evidence, (mass spec data) suggesting that it is also translated.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processed_pseudogene","termid":"SO:0000043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated_processed_pseudogene","synonyms":[{"name":"translated processed pseudogene","type":"exact"}],"termid":"SO:0002105"}


id: MONDO:0018005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-Paget disease of bone syndrome is an extremely rare, complex form of hereditary spastic paraplegia characterized by a slowly progressive spastic paraplegia (with increased muscle tone, decreased strength in the anterior tibial muscles and hyperreflexia in the lower extremities with Babinski sign) presenting in adulthood, associated with Paget disease of the bone. Cognitive decline, dementia and myopathic changes at muscle biopsy have not been reported.","definition_xrefs":["Orphanet:329475"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia-Paget disease of bone syndrome","secondary_identifiers":["MEDGEN:1388986","UMLS:C4511969","GARD:21491"],"termid":"MONDO:0018005","xrefs":{"Monarch":{"xref_id":"0018005"}}}


id: PBO:0052657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 25","termid":"PBO:0052657"}


id: PBO:0039836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP5 antisense RNA 1 (head to head)","termid":"PBO:0039836"}


id: MONDO:0000182
data:
  {"annotated_genes":["SJAG_03056","SJAG_04728","SJAG_00924"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012518"},{"annotations":[86493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013883"},{"annotations":[85737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014543"}]},"cv_name":"mondo","definition":"A congenital myasthenic syndrome with a finding of tubular aggregates in myofibers.","definition_xrefs":["PMID:21975507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00924":null,"SJAG_03056":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome with tubular aggregates","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:610542"],"synonyms":[{"name":"CMS-TA","type":"exact"},{"name":"myasthenic syndrome, congenital, with tubular aggregates","type":"exact"}],"termid":"MONDO:0000182","terms_by_termid":{"MONDO:0012518":null,"MONDO:0013883":null,"MONDO:0014543":null},"xrefs":{"Monarch":{"xref_id":"0000182"}}}


id: PBO:0083491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YDL185W; identified by homology with hemiascomycetous yeast species","termid":"PBO:0083491"}


id: PBO:0016936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR101","termid":"PBO:0016936"}


id: PBO:0085706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in septin-ER tethering; interacts with ER membrane protein, Scs2p, and Shs1p, a septin ring component, at bud neck to create ER diffusion barrier; GFP-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck; interacts with Crm1p in two-hybrid assay; YMR124W has a paralog, YLR031W, that arose from the whole genome duplication","termid":"PBO:0085706"}


id: MONDO:1011334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mouth mucosa disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouth mucosa disorder, non-human animal","termid":"MONDO:1011334","xrefs":{"Monarch":{"xref_id":"1011334"}}}


id: GO:1900606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tensidol B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tensidol B metabolic process","synonyms":[{"name":"tensidol B metabolism","type":"exact"}],"termid":"GO:1900606"}


id: GO:0052228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving protein macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host protein (obsolete GO:0052228)","termid":"GO:0052228"}


id: MONDO:0014447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the IFT27 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 19","secondary_identifiers":["OMIM:615996","UMLS:C3889475","DOID:0110141","MEDGEN:855173","GARD:16043"],"synonyms":[{"name":"BBS19","type":"exact"},{"name":"Bardet-Biedl syndrome 19","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in IFT27","type":"exact"},{"name":"Bardet-Biedl syndrome type 19","type":"exact"},{"name":"IFT27 Bardet-Biedl syndrome","type":"exact"}],"termid":"MONDO:0014447","xrefs":{"Monarch":{"xref_id":"0014447"}}}


id: PBO:0087499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Elongator complex; Elongator is required for modification of wobble nucleosides in tRNA; maintains structural integrity of Elongator; homolog of human IKAP, mutations in which cause familial dysautonomia (FD)","termid":"PBO:0087499"}


id: PBO:0062521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily Q member 1 pseudogene","termid":"PBO:0062521"}


id: GO:0061207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerular apparatus development","termid":"GO:0061212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerulus cell differentiation","termid":"GO:0061207"}


id: GO:0051538
data:
  {"annotated_genes":["SJAG_04054","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59830,66473],"is_not":false,"summary":null,"term":"GO:0051538"}]},"cv_name":"molecular_function","definition":"Binding to a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing.","definition_xrefs":["PMID:15952888","Wikipedia:Iron-sulfur_cluster","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"3 iron, 4 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000043":null},"synonyms":[{"name":"3 Fe 4 S cluster binding","type":"exact"},{"name":"3 iron, 4 sulphur cluster binding","type":"exact"},{"name":"3Fe-4S cluster binding","type":"exact"},{"name":"iron-sulfur cluster 3Fe-4S binding","type":"exact"},{"name":"iron-sulphur cluster 3Fe-4S binding","type":"exact"},{"name":"triiron tetrasulfide cluster binding","type":"exact"},{"name":"triiron tetrasulphide cluster binding","type":"exact"}],"termid":"GO:0051538","terms_by_termid":{"GO:0051538":null}}


id: GO:0006854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP/ADP exchange (obsolete GO:0006854)","synonyms":[{"name":"ATP/ADP exchange","type":"exact"}],"termid":"GO:0006854"}


id: PBO:0057970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689c","termid":"PBO:0057970"}


id: PBO:0016912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family Rio1 (predicted)","termid":"PBO:0016912"}


id: MONDO:0044906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the bladder that involves the transitional epithelium projecting above the surrounding epithelial surface and consisting of villous or arborescent outgrowths of fibrovascular stroma.","definition_xrefs":["NCIT:C39858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder benign neoplasm","termid":"MONDO:0000384"},{"relation_name":"is_a","term_name":"non-invasive bladder papillary urothelial neoplasm","termid":"MONDO:0003822"},{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder urothelial papilloma","secondary_identifiers":["MEDGEN:237227","UMLS:C1384678"],"synonyms":[{"name":"bladder transitional cell papilloma","type":"exact"},{"name":"bladder urothelial papilloma","type":"exact"},{"name":"urinary bladder transitional cell papilloma","type":"exact"},{"name":"urinary bladder urothelial papilloma","type":"exact"}],"termid":"MONDO:0044906","xrefs":{"Monarch":{"xref_id":"0044906"}}}


id: PBO:0051984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jagunal homolog 1","termid":"PBO:0051984"}


id: FYPO:0001350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects the organization of the microtubule cytoskeleton in the vegetative growth phase of the life cycle. Microtubule cytoskeleton organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["GO:0000226","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization during vegetative growth","termid":"FYPO:0001328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton organization during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton organisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule cytoskeleton organization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule organisation during vegetative growth","type":"related"},{"name":"abnormal microtubule organization during vegetative growth","type":"related"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"},{"name":"microtubule cytoskeleton defects during vegetative growth","type":"exact"},{"name":"microtubule organization defects during vegetative growth","type":"related"}],"termid":"FYPO:0001350"}


id: FYPO:0004828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"},{"relation_name":"is_a","term_name":"normal protein localization during mitosis","termid":"FYPO:0004328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nucleus during mitosis","synonyms":[{"name":"normal protein localisation to nucleus during mitosis","type":"exact"},{"name":"normal protein localization to nucleus during mitosis during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during mitotic M phase","type":"related"},{"name":"normal protein localization to nucleus during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004828"}


id: FYPO:0000101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chlorpropham. Cells stop growing (and may die) at a concentration of chlorpropham that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to chlorpropham","synonyms":[{"name":"hypersensitive to chlorpropham","type":"exact"},{"name":"sensitive to chlorpropham during mitotic cell cycle","type":"related"},{"name":"sensitive to chlorpropham during vegetative growth","type":"exact"},{"name":"sensitive to isopropyl N-3-chlorophenyl carbamate","type":"exact"},{"name":"sensitive to spindle poison","type":"broad"}],"termid":"FYPO:0000101"}


id: PBO:0031359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_aureobasidin_A","termid":"PBO:0031359"}


id: MONDO:0011864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"immunodeficiency, common variable, 1","secondary_identifiers":["OMIM:607594","MEDGEN:460728","DOID:0081144","UMLS:C3149378"],"synonyms":[{"name":"CVID1","type":"related"},{"name":"antibody deficiency due to Icos defect","type":"related"},{"name":"immunodeficiency, common variable","type":"related"},{"name":"immunodeficiency, common variable, 1","type":"exact"},{"name":"immunodeficiency, common variable, type 1","type":"exact"}],"termid":"MONDO:0011864","xrefs":{"Monarch":{"xref_id":"0011864"}}}


id: GO:0070635
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90980],"is_not":false,"summary":null,"term":"GO:0070635"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinamide riboside + H2O = nicotinamide + D-ribose.","definition_xrefs":["MetaCyc:RXN-8441","PMID:19001417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"nicotinamide riboside hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide hydrolase activity","type":"exact"},{"name":"nicotinamide ribonucleoside hydrolase activity","type":"exact"}],"termid":"GO:0070635","terms_by_termid":{"GO:0070635":null}}


id: GO:0032581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of peroxisome organization in which assembly or arrangement of constituent parts takes place in the endoplasmic reticulum.","definition_xrefs":["PMID:17646399","GOC:mah","PMID:16717127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007031","GO:0008150"],"is_obsolete":false,"name":"ER-dependent peroxisome organization","synonyms":[{"name":"ER-dependent peroxisome biogenesis","type":"related"},{"name":"ER-dependent peroxisome organisation","type":"exact"},{"name":"endoplasmic reticulum-dependent peroxisome organization","type":"exact"}],"termid":"GO:0032581"}


id: PBO:0041141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4","termid":"PBO:0041141"}


id: PBO:0039751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 2","termid":"PBO:0039751"}


id: FYPO:0004151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of pyridoxine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular pyridoxine level","synonyms":[{"name":"decreased cellular pyridoxine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular pyridoxine level during vegetative growth","type":"exact"},{"name":"decreased pyridoxine accumulation","type":"related"},{"name":"reduced cellular pyridoxine level","type":"exact"}],"termid":"FYPO:0004151"}


id: PBO:0066099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS protein activator like 3","termid":"PBO:0066099"}


id: PBO:0074975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-17","termid":"PBO:0074975"}


id: GO:0009377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the ATP-dependent hydrolysis of peptide bonds in substrates including E. coli SulA and misfolded proteins.","definition_xrefs":["PMID:10368141","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete HslUV protease activity (obsolete GO:0009377)","synonyms":[{"name":"HslUV protease activity","type":"exact"}],"termid":"GO:0009377"}


id: MONDO:0013689
data:
  {"annotated_genes":["SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85964],"is_not":false,"summary":null,"term":"MONDO:0013689"}]},"cv_name":"mondo","definition":"Any 46 XX gonadal dysgenesis in which the cause of the disease is a mutation in the PSMC3IP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3280471","DOID:0080495","MEDGEN:482101","GARD:18041","OMIM:614324"],"synonyms":[{"name":"46 XX gonadal dysgenesis caused by mutation in PSMC3IP","type":"exact"},{"name":"ODG3","type":"related"},{"name":"PSMC3IP 46 XX gonadal dysgenesis","type":"exact"},{"name":"ovarian dysgenesis 3","type":"exact"},{"name":"ovarian dysgenesis type 3","type":"exact"}],"termid":"MONDO:0013689","terms_by_termid":{"MONDO:0013689":null},"xrefs":{"Monarch":{"xref_id":"0013689"}}}


id: PBO:0091589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A) bearing, possible SPAC22E12.02 UTR","termid":"PBO:0091589"}


id: PBO:0065545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin D2 receptor 2","termid":"PBO:0065545"}


id: MONDO:0005579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A generalised epilepsy that encompasses several common seizure phenotypes including childhood absence epilepsy, juvenile absence epilepsy, juvenile myoclonic epilepsy and epilepsy with generalized tonic-clonic seizures alone. These epilepsy syndromes have polygenic inheritance with or without environmental factors contributing to seizure susceptibility. Seizure types include one or a combination of absence seizures, myoclonic seizures and/or generalized tonic-clonic seizures.","definition_xrefs":["OMIM:600669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary generalized epilepsy","termid":"MONDO:0100576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"idiopathic generalized epilepsy","secondary_identifiers":["SCTID:19598007","DOID:1827","EFO:0005917","MEDGEN:75725","MESH:C562694","OMIMPS:600669","UMLS:C0270850"],"synonyms":[{"name":"EIG","type":"exact"},{"name":"IGE","type":"exact"},{"name":"epilepsy, idiopathic generalized","type":"exact"},{"name":"generalized epilepsy","type":"broad"},{"name":"hereditary idiopathic generalized epilepsy","type":"exact"},{"name":"idiopathic generalised epilepsy","type":"exact"},{"name":"idiopathic generalized epilepsy","type":"exact"}],"termid":"MONDO:0005579","xrefs":{"Monarch":{"xref_id":"0005579"}}}


id: GO:0047781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + citrulline = NH3 + CO2 + L-ornithine.","definition_xrefs":["EC:3.5.1.20","MetaCyc:CITRULLINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"citrullinase activity","secondary_identifiers":["RHEA:11940"],"synonyms":[{"name":"L-citrulline 5-N-carbamoyldihydrolase activity","type":"related"},{"name":"L-citrulline N5-carbamoyldihydrolase activity","type":"related"},{"name":"citrulline hydrolase activity","type":"related"},{"name":"citrulline ureidase activity","type":"related"}],"termid":"GO:0047781"}


id: PBO:0049303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 4","termid":"PBO:0049303"}


id: PBO:0031766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_antimycin_A","termid":"PBO:0031766"}


id: GO:0009863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by salicylic acid.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to salicylic acid stimulus","termid":"GO:0071446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"salicylic acid mediated signaling pathway","synonyms":[{"name":"salicylic acid mediated signal transduction","type":"exact"},{"name":"salicylic acid mediated signalling pathway","type":"exact"},{"name":"salicylic acid-mediated signaling pathway","type":"exact"}],"termid":"GO:0009863"}


id: PR:O14061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ast1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asteroid homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.05","synonyms":[{"name":"Spom972h-ast1","type":"exact"}],"termid":"PR:O14061"}


id: GO:0003876
data:
  {"annotated_genes":["SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76755],"is_not":false,"summary":null,"term":"GO:0003876"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + H2O = IMP + NH3.","definition_xrefs":["EC:3.5.4.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine-phosphate deaminase activity","termid":"GO:0047623"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04123":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"AMP deaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:14777","Reactome:R-HSA-76590","MetaCyc:AMP-DEAMINASE-RXN"],"synonyms":[{"name":"5-AMP deaminase activity","type":"related"},{"name":"5-adenylate deaminase activity","type":"related"},{"name":"5-adenylic acid deaminase activity","type":"related"},{"name":"AMP aminase activity","type":"related"},{"name":"AMP aminohydrolase activity","type":"related"},{"name":"adenosine 5-monophosphate deaminase activity","type":"related"},{"name":"adenosine 5-phosphate aminohydrolase activity","type":"related"},{"name":"adenosine monophosphate deaminase activity","type":"related"},{"name":"adenyl deaminase activity","type":"related"},{"name":"adenylate aminohydrolase activity","type":"related"},{"name":"adenylate deaminase activity","type":"related"},{"name":"adenylate deaminase reaction","type":"exact"},{"name":"adenylate desaminase activity","type":"related"},{"name":"adenylic acid deaminase activity","type":"related"},{"name":"adenylic deaminase activity","type":"related"},{"name":"myoadenylate deaminase activity","type":"narrow"}],"termid":"GO:0003876","terms_by_termid":{"GO:0003876":null}}


id: PBO:0117275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gfo/idh/mocA family NAD(P)H oxidoreductase family, implicated in transcription","termid":"PBO:0117275"}


id: MONDO:0012368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aminoacylase 1 deficiency (ACY1D) is an inborn error of metabolism marked by a characteristic pattern of urinary N-acetyl amino acid excretion and neurologic symptoms.","definition_xrefs":["Orphanet:137754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn aminoacylase deficiency","termid":"MONDO:0017686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"aminoacylase 1 deficiency","secondary_identifiers":["MESH:C538246","MEDGEN:324393","EFO:1001981","OMIM:609924","UMLS:C1835922","GARD:9741","ICD9:270.8","SCTID:709282004"],"synonyms":[{"name":"ACY1 deficiency","type":"related"},{"name":"ACY1D","type":"exact"},{"name":"N-acyl-L-amino acid amidohydrolase deficiency","type":"exact"},{"name":"aminoacylase 1 deficiency","type":"exact"},{"name":"deficiency of the aminoacylase-1 enzyme","type":"related"},{"name":"neurological conditions associated with aminoacylase 1 deficiency","type":"exact"}],"termid":"MONDO:0012368","xrefs":{"Monarch":{"xref_id":"0012368"}}}


id: GO:0036219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + H2O = GMP + H+ + diphosphate.","definition_xrefs":["GOC:dgf","PMID:22531138","RHEA:29391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0047429","GO:0003824"],"is_obsolete":false,"name":"GTP diphosphatase activity","secondary_identifiers":["KEGG_REACTION:R00426"],"synonyms":[{"name":"GTP diphosphohydrolase (diphosphate-forming); guanosine 5'-triphosphate pyrophosphohydrolase","type":"exact"},{"name":"GTP diphosphohydrolase activity","type":"exact"},{"name":"GTP pyrophosphatase activity","type":"exact"}],"termid":"GO:0036219"}


id: GO:0030125
data:
  {"annotated_genes":["SJAG_00379","SJAG_02805","SJAG_02177","SJAG_04565","SJAG_04644","SJAG_04609","SJAG_01167","SJAG_00104","SJAG_01809","SJAG_00800","SJAG_04517","SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74053,80089],"is_not":false,"summary":null,"term":"GO:0030125"},{"annotations":[62227,78094,113325,113113],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[74685,78431,58322,108652],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[58806,65651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030130"}]},"cv_name":"cellular_component","definition":"A clathrin coat found on a vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat","termid":"GO:0030118"},{"relation_name":"is_a","term_name":"vesicle coat","termid":"GO:0030120"},{"relation_name":"part_of","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"clathrin vesicle coat","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030125","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null}}


id: MONDO:0001529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A finding of low numbers of red and white blood cells and platelets in the peripheral blood.","definition_xrefs":["NCIT:C34889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"pancytopenia","secondary_identifiers":["MEDGEN:18281","SCTID:127034005","UMLS:C0030312","MESH:D010198","ICD9:284.1","DOID:12450","ICD9:284.89"],"termid":"MONDO:0001529","xrefs":{"Monarch":{"xref_id":"0001529"}}}


id: GO:0036344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation and organization of a platelet, a non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.","definition_xrefs":["GOC:BHF","GOC:vk","CL:0000233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet morphogenesis","termid":"GO:0036344"}


id: PBO:0090625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external invertase, beta-fructofuranosidase Inv1","termid":"PBO:0090625"}


id: MONDO:0020205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bulbar conjunctival dermoid or conjunctival dermolipoma (obsolete MONDO:0020205)","secondary_identifiers":["Orphanet:98617"],"termid":"MONDO:0020205","xrefs":{"Monarch":{"xref_id":"0020205"}}}


id: MONDO:1012505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydrallantois, non-human animal","termid":"MONDO:1011672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, sheep","secondary_identifiers":["OMIA:002053-9940"],"termid":"MONDO:1012505","xrefs":{"Monarch":{"xref_id":"1012505"}}}


id: GO:1900148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell migration.","definition_xrefs":["GOC:sjw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell migration","termid":"GO:1900147"},{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"negatively_regulates","term_name":"Schwann cell migration","termid":"GO:0036135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell migration","synonyms":[{"name":"down regulation of Schwann cell migration","type":"exact"},{"name":"down-regulation of Schwann cell migration","type":"exact"},{"name":"downregulation of Schwann cell migration","type":"exact"},{"name":"inhibition of Schwann cell migration","type":"narrow"}],"termid":"GO:1900148"}


id: GO:0031365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The alteration of the N-terminal amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid modification","secondary_identifiers":["GO:0018409"],"synonyms":[{"name":"peptide or protein amino-terminal blocking","type":"related"},{"name":"peptide/protein amino-terminal blocking","type":"related"}],"termid":"GO:0031365"}


id: PBO:0065191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 3","termid":"PBO:0065191"}


id: MONDO:0009123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare primary monoamine neurotransmitter synthesis disorder with norepinephrine and adrenaline deficiency that leads to young-onset severe orthostatic hypotension and eyelid ptosis.","definition_xrefs":["Orphanet:230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of catecholamine synthesis","termid":"MONDO:0017759"},{"relation_name":"is_a","term_name":"inherited orthostatic hypotension","termid":"MONDO:0021272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"orthostatic hypotension 1","secondary_identifiers":["SCTID:237923004","ICD9:270.8","GARD:1903","MESH:C535600","OMIM:223360","DOID:0090145","MEDGEN:1648402","NANDO:2200597","UMLS:C4746777"],"synonyms":[{"name":"congenital dopamine beta-hydroxylase deficiency","type":"exact"},{"name":"dopamine BETA-HYDROXYLASE deficiency, congenital","type":"related"},{"name":"dopamine beta hydroxylase deficiency","type":"related"},{"name":"dopamine beta-hydroxylase deficiency","type":"exact"},{"name":"noradrenaline deficiency","type":"exact"},{"name":"norepinephrine deficiency","type":"exact"},{"name":"orthostatic hypotension 1, due to DBH deficiency","type":"exact"}],"termid":"MONDO:0009123","xrefs":{"Monarch":{"xref_id":"0009123"}}}


id: FYPO:0007349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 1.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 1","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"},{"name":"decreased homologous chromosome pairing at omt3 locus","type":"narrow"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"}],"termid":"FYPO:0007349"}


id: FYPO:0007583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased during telophase of mitosis.","definition_xrefs":["PMID:19736319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm","termid":"FYPO:0006099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm during mitotic telophase","synonyms":[{"name":"decreased protein localisation to cytoplasm during mitotic telophase","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase during vegetative growth","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase of mitotic cell cycle","type":"exact"},{"name":"reduced protein localization to cytoplasm during mitotic telophase","type":"exact"}],"termid":"FYPO:0007583"}


id: GO:0005009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with insulin receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0004672","GO:0038023","GO:0140096","GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"insulin receptor activity","secondary_identifiers":["Reactome:R-HSA-74715"],"synonyms":[{"name":"insulin-activated receptor activity","type":"exact"}],"termid":"GO:0005009"}


id: GO:0050261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aldehydo-D-ribose = D-ribulose.","definition_xrefs":["RHEA:20796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribose isomerase activity","secondary_identifiers":["KEGG_REACTION:R01081","MetaCyc:RIBOSE-ISOMERASE-RXN","EC:5.3.1.20"],"synonyms":[{"name":"D-ribose aldose-ketose-isomerase activity","type":"related"},{"name":"D-ribose isomerase activity","type":"related"},{"name":"D-ribose ketol-isomerase activity","type":"related"}],"termid":"GO:0050261"}


id: GO:0016305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A phosphoinositide 3-kinase which can phosphorylate phosphatidylinositol and phosphatidylinositol-4-phosphate; the human form can phosphorylate phosphatidylinositol-4,5-bisphosphate in the presence of phosphatidylserine.","definition_xrefs":["PMID:9759495"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity, class II (obsolete GO:0016305)","synonyms":[{"name":"PI3KC2","type":"exact"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"exact"}],"termid":"GO:0016305"}


id: PBO:0086427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hexose transporter that is nearly identical to Hxt11p; has similarity to major facilitator superfamily (MFS) transporters, expression of HXT9 is regulated by transcription factors Pdr1p and Pdr3p","termid":"PBO:0086427"}


id: PBO:0041505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13 open reading frame 46","termid":"PBO:0041505"}


id: PBO:0073967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 16","termid":"PBO:0073967"}


id: PBO:0078728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 3-2","termid":"PBO:0078728"}


id: PBO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II heavy chain Myo3","termid":"PBO:0001606"}


id: FYPO:0001772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased tRNA methyltransferase activity","synonyms":[{"name":"reduced tRNA methyltransferase activity","type":"exact"}],"termid":"FYPO:0001772"}


id: MONDO:0020734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete erythrocyte AMP deaminase deficiency (obsolete MONDO:0020734)","secondary_identifiers":["OMIM:612874"],"synonyms":[{"name":"AMP deaminase deficiency, erythrocytic","type":"exact"},{"name":"erythrocyte AMP deaminase deficiency","type":"exact"}],"termid":"MONDO:0020734","xrefs":{"Monarch":{"xref_id":"0020734"}}}


id: GO:0035406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a tyrosine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-tyrosine phosphorylation (obsolete GO:0035406)","synonyms":[{"name":"histone tyrosine phosphorylation","type":"exact"}],"termid":"GO:0035406"}


id: MONDO:0026777
data:
  {"annotated_genes":["SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86223],"is_not":false,"summary":null,"term":"MONDO:0026777"}]},"cv_name":"mondo","definition":"An adult-onset inflammatory disease that affects only males and is caused by somatic, not germline, mutations. The disorder is characterized by adult onset of rheumatologic symptoms at a mean age of 64 years. Features include recurrent fevers, pulmonary and dermatologic inflammatory manifestations, vasculitis, deep vein thrombosis, arthralgias, and ear and nose chondritis. Laboratory studies indicate hematologic abnormalities, including macrocytic anemia, as well as increased levels of acute-phase reactants; about half of patients have positive autoantibodies. Bone marrow biopsy shows degenerative vacuolization restricted to myeloid and erythroid precursor cells, as well as variable hematopoietic dyspoiesis and dysplasias. The condition does not respond to rheumatologic medications and the features may result in premature death.","definition_xrefs":["OMIM:301054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00853":null},"genotype_count":0,"is_obsolete":false,"name":"VEXAS syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5435753","MEDGEN:1765785","DOID:0080828","GARD:15001","NCIT:C181924","Orphanet:596753"],"synonyms":[{"name":"VEXAS","type":"exact"},{"name":"VEXAS syndrome, somatic","type":"exact"},{"name":"vacuoles, E1 enzyme, X-linked, autoinflammatory, somatic syndrome","type":"exact"}],"termid":"MONDO:0026777","terms_by_termid":{"MONDO:0026777":null},"xrefs":{"Monarch":{"xref_id":"0026777"}}}


id: GO:0071693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins in the extracellular region, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to extracellular region","termid":"GO:0035592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein transport within extracellular region","termid":"GO:0071693"}


id: _global:is_measurement_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_measurement_of","termid":"_global:is_measurement_of"}


id: PBO:0046036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 4","termid":"PBO:0046036"}


id: GO:0042633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body.","definition_xrefs":["GOC:go_curators","PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair cycle","termid":"GO:0042633"}


id: PBO:0068326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 31","termid":"PBO:0068326"}


id: PBO:0029961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytochrome-c_oxidase_activity","termid":"PBO:0029961"}


id: GO:0055015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a ventricular cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood out of the organ.","definition_xrefs":["GOC:devbiol","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell development","termid":"GO:0055013"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell differentiation","termid":"GO:0055012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell development","synonyms":[{"name":"ventricular cardiomyocyte development","type":"exact"},{"name":"ventricular heart muscle cell development","type":"exact"}],"termid":"GO:0055015"}


id: SO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pi helix has 4.1 residues per turn and a translation of 1.15 (=0.115 nm) along the helical axis. The N-H group of an amino acid forms a hydrogen bond with the C=O group of the amino acid five residues earlier.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right_handed_peptide_helix","termid":"SO:0001116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"pi_helix","secondary_identifiers":["http://en.wikipedia.org/wiki/Pi_helix","BS:00153"],"synonyms":[{"name":"pi helix","type":"exact"}],"termid":"SO:0001118"}


id: PBO:0068630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 10, pseudogene","termid":"PBO:0068630"}


id: GO:0070865
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoskeletal part that consists of a microfilament-rich cone that forms round each nucleus in a spermatogenic cyst and translocates the length of the cyst during sperm individualization.","definition_xrefs":["PMID:9550716","PMID:15829565","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"sperm individualization complex","termid":"GO:0070864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"investment cone","synonyms":[{"name":"F-actin cone","type":"exact"}],"termid":"GO:0070865"}


id: PBO:0028307
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_methylglyoxal","termid":"PBO:0028307"}


id: PBO:0083396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF RGI1/YER067W","termid":"PBO:0083396"}


id: MOD:01535
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01535"}


id: GO:0090024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte chemotaxis","termid":"GO:0071623"},{"relation_name":"is_a","term_name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil migration","termid":"GO:1902623"},{"relation_name":"negatively_regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil chemotaxis","termid":"GO:0090024"}


id: GO:0008837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: LL-2,6-diaminopimelate = meso-2,6-diaminopimelate.","definition_xrefs":["RHEA:15393","EC:5.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diaminopimelate epimerase activity","secondary_identifiers":["MetaCyc:DIAMINOPIMEPIM-RXN","KEGG_REACTION:R02735"],"synonyms":[{"name":"LL-2,6-diaminoheptanedioate 2-epimerase activity","type":"related"}],"termid":"GO:0008837"}


id: FYPO:0005318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more MluI cell cycle box factor elements (MCBs) occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"decreased transcription from MCB promoter","synonyms":[{"name":"decreased transcription from MCB promoter during mitotic cell cycle","type":"related"},{"name":"decreased transcription from MCB promoter during vegetative growth","type":"exact"},{"name":"expression of MBF target genes decreased","type":"related"}],"termid":"FYPO:0005318"}


id: PBO:0060394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 2B","termid":"PBO:0060394"}


id: PBO:0063758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB2 pseudogene 1","termid":"PBO:0063758"}


id: MONDO:0018432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mucinosis","termid":"MONDO:0002523"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen myxedematosus","secondary_identifiers":["UMLS:C5848049","GARD:21709","ICD9:701.8","Orphanet:402007","MEDGEN:1848864","SCTID:111197009"],"synonyms":[{"name":"lichen myxoedematosus","type":"exact"},{"name":"lichenoid myxedema","type":"related"},{"name":"papular mucinosis","type":"related"}],"termid":"MONDO:0018432","xrefs":{"Monarch":{"xref_id":"0018432"}}}


id: MONDO:0009358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hutterite cerebroosteonephrodysplasia syndrome","secondary_identifiers":["UMLS:C1856054","MESH:C536074","MEDGEN:343466","OMIM:236450"],"synonyms":[{"name":"Hutterite cerebroosteonephrodysplasia syndrome","type":"exact"},{"name":"cerebroosteonephosis syndrome","type":"related"},{"name":"cond","type":"related"}],"termid":"MONDO:0009358","xrefs":{"Monarch":{"xref_id":"0009358"}}}


id: PBO:0076396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 3","termid":"PBO:0076396"}


id: GO:0097543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Proximal part of the ciliary shaft to which the inversin protein (also called Inv) specifically localizes. The inversin compartment appears to have a different protein composition than the rest of the cilium, although there is no structure that separates it form the distal part of the cilium.","definition_xrefs":["PMID:19050042","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary inversin compartment","synonyms":[{"name":"Inv compartment of the cilium","type":"exact"},{"name":"cilial inversin compartment","type":"exact"},{"name":"cilium inversin compartment","type":"exact"},{"name":"flagellar inversin compartment","type":"exact"},{"name":"flagellum inversin compartment","type":"exact"},{"name":"inversin compartment","type":"broad"}],"termid":"GO:0097543"}


id: PBO:0054535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1935","termid":"PBO:0054535"}


id: PBO:0012066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis (predicted)","termid":"PBO:0012066"}


id: PBO:0088368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein","termid":"PBO:0088368"}


id: PBO:0061963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 42","termid":"PBO:0061963"}


id: PBO:0064113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1 like 3, transient receptor potential channel interacting","termid":"PBO:0064113"}


id: PBO:0042298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD7 molecule","termid":"PBO:0042298"}


id: PBO:0059300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L48 pseudogene 1","termid":"PBO:0059300"}


id: PBO:0081797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 726 pseudogene 1","termid":"PBO:0081797"}


id: FYPO:0005786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing extends for a shorter distance from the breaks site than normal. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["GO:0000729","PMID:27729451","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break processing","termid":"FYPO:0002553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased spatial extent of double-strand break processing","synonyms":[{"name":"decreased spatial extent of DSB processing","type":"exact"},{"name":"decreased spatial extent of double-strand break processing during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of double-strand break processing during vegetative growth","type":"exact"},{"name":"decreased spatial extent of double-strand break resection","type":"exact"},{"name":"reduced spatial extent of double-strand break processing","type":"exact"}],"termid":"FYPO:0005786"}


id: PBO:0088775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex (poly(A)-specific ribonuclease) ubiquitin C-terminal hydrolase subunit Pan2","termid":"PBO:0088775"}


id: PBO:0036254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein (predicted)","termid":"PBO:0036254"}


id: GO:0004960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a thromboxane (TXA) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor activity","termid":"GO:0004954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thromboxane receptor activity","synonyms":[{"name":"TXA receptor activity","type":"exact"}],"termid":"GO:0004960"}


id: PBO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc2 (predicted)","termid":"PBO:0002257"}


id: PBO:0058819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7976","termid":"PBO:0058819"}


id: MONDO:0012887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 1q32.1.","definition_xrefs":["DOID:0110884","PMID:15937090","PMID:18587394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 23","secondary_identifiers":["UMLS:C2676484","MESH:C567326","OMIM:612381","MEDGEN:382861"],"synonyms":[{"name":"IBD23","type":"exact"},{"name":"inflammatory bowel disease 23","type":"exact"},{"name":"inflammatory bowel disease type 23","type":"exact"}],"termid":"MONDO:0012887","xrefs":{"Monarch":{"xref_id":"0012887"}}}


id: MONDO:0001052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of otomycosis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otomycosis","termid":"MONDO:0000262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chronic fungal otitis externa","secondary_identifiers":["DOID:10519","ICD9:380.15","SCTID:111898002","UMLS:C0155396","MEDGEN:509951"],"synonyms":[{"name":"chronic mycotic otitis externa","type":"exact"},{"name":"chronic otomycosis","type":"exact"},{"name":"otomycosis, chronic","type":"exact"}],"termid":"MONDO:0001052","xrefs":{"Monarch":{"xref_id":"0001052"}}}


id: PBO:0043189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4","termid":"PBO:0043189"}


id: MONDO:0015764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 20 is a rare chromosomal anomaly syndrome with a highly variable phenotype ranging from normal (in the majority of cases) to a mild, subtle phenotype principally characterized by spinal abnormalities (i.e. stenosis, vertebral fusion, and kyphosis), hypotonia, lifelong constipation, sloped shoulders, skin pigmentation abnormalities (i.e. linear and whorled nevoid hypermelanosis) and significant learning disabilities despite normal intelligence. More severe phenotypes, with patients presenting psychomotor and speech delay, mild facial dysmorphism, cardiac (i.e. ventricular septal defect, dysplastic tricuspid mitral valve) and renal anomalies (e.g. horseshoe kidneys), have also been reported.","definition_xrefs":["Orphanet:1724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 trisomy","termid":"MONDO:0022757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 20","secondary_identifiers":["GARD:18744"],"synonyms":[{"name":"Mosaic trisomy chromosome 20","type":"exact"},{"name":"Mosaic trisomy type 20","type":"exact"}],"termid":"MONDO:0015764","xrefs":{"Monarch":{"xref_id":"0015764"}}}


id: GO:0046906
data:
  {"annotated_genes":["SJAG_03249","SJAG_02794","SJAG_05027","SJAG_04823","SJAG_04217","SJAG_02982","SJAG_03929","SJAG_02744","SJAG_02646","SJAG_MIT04","SJAG_03750","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64904,59063,119364,61671,70750,78380,77149,68050,57490,94960,71306,78643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0020037"}]},"cv_name":"molecular_function","definition":"Binding to a tetrapyrrole, a compound containing four pyrrole nuclei variously substituted and linked to each other through carbons at the alpha position.","definition_xrefs":["ISBN:0198506732","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":12,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_02794":null,"SJAG_02982":null,"SJAG_03249":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04217":null,"SJAG_04823":null,"SJAG_05027":null,"SJAG_MIT04":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tetrapyrrole binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin binding","type":"narrow"}],"termid":"GO:0046906","terms_by_termid":{"GO:0020037":null}}


id: PBO:0064954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 6","termid":"PBO:0064954"}


id: PBO:0055350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2779","termid":"PBO:0055350"}


id: PBO:0011985
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although this is demonstrated to be DNA polymerase epsilon interactor and names Dpb3, it appears to be the ortholog of S. cerevisie BUR6 and human DRAP1 (supported by PSIblast/ Treefam). The real Dpb3 appears to be the newly identified SPCC16C4.22 see Treefam:TF103009","termid":"PBO:0011985"}


id: GO:0005499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["ISBN:0471331309","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"vitamin D binding","synonyms":[{"name":"calciferol binding","type":"narrow"},{"name":"cholecalciferol binding","type":"narrow"},{"name":"ergocalciferol binding","type":"narrow"}],"termid":"GO:0005499"}


id: GO:0010821
data:
  {"annotated_genes":["SJAG_03887","SJAG_00855","SJAG_03957","SJAG_04203","SJAG_00304","SJAG_01212"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90137],"is_not":false,"summary":null,"term":"GO:0010821"},{"annotations":[116633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[106780,102366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[96069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"},{"annotations":[109205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a mitochondrion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00304":null,"SJAG_00855":null,"SJAG_01212":null,"SJAG_03887":null,"SJAG_03957":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"regulation of mitochondrion organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrion organisation","type":"exact"}],"termid":"GO:0010821","terms_by_termid":{"GO:0010637":null,"GO:0010821":null,"GO:0090141":null,"GO:0090258":null,"GO:0090297":null}}


id: PBO:0030328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity","termid":"PBO:0030328"}


id: PBO:0012214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_level_of","termid":"PBO:0012214"}


id: GO:2000299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Rho-dependent protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"},{"relation_name":"is_a","term_name":"regulation of Rho-dependent protein serine/threonine kinase activity","termid":"GO:2000298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Rho-dependent protein serine/threonine kinase activity","synonyms":[{"name":"negative regulation of ROCK kinase activity","type":"exact"},{"name":"negative regulation of Rho-associated protein kinase activity","type":"exact"}],"termid":"GO:2000299"}


id: MONDO:0012283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, midfacial hypoplasia, triangular facies, and sensorineural hearing loss","secondary_identifiers":["MEDGEN:324442","UMLS:C1836120","OMIM:609466","MESH:C536427"],"synonyms":[{"name":"cleft palate, midfacial hypoplasia, triangular facies, and sensorineural hearing loss","type":"exact"}],"termid":"MONDO:0012283","xrefs":{"Monarch":{"xref_id":"0012283"}}}


id: PBO:0086106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of succinate dehydrogenase; interacts with flavinylated Sdh1p and may function as a chaperone for free Sdh1p, protecting its FAD cofactor from redox reactions before assembly of the complex; soluble protein of the mitochondrial matrix; respiratory defect of null mutant is functionally complemented by Drosophila and human orthologs","termid":"PBO:0086106"}


id: MONDO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"eyelid degenerative disorder","secondary_identifiers":["DOID:10120","MEDGEN:509851","UMLS:C0155209","SCTID:1112003","ICD9:374.50"],"synonyms":[{"name":"eyelid neurodegenerative disease","type":"exact"},{"name":"neurodegenerative disease of eyelid","type":"exact"}],"termid":"MONDO:0000941","xrefs":{"Monarch":{"xref_id":"0000941"}}}


id: PBO:0088198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc knuckle protein; involved in nuclear RNA processing and degradation as a component of the TRAMP complex; stimulates the poly(A) polymerase activity of Pap2p in vitro; AIR1 has a paralog, AIR2, that arose from the whole genome duplication; although Air1p and Air2p are homologous TRAMP subunits, they have nonredundant roles in regulation of substrate specificity of the exosome","termid":"PBO:0088198"}


id: PBO:0085541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; interacts with Kti11p; deletion causes hypersensitivity to zymocin; homologous to mammalian ribosomal protein S7, no bacterial homolog; RPS7A has a paralog, RPS7B, that arose from the whole genome duplication","termid":"PBO:0085541"}


id: PBO:0089634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-responsive DNA-binding transcription factor Prr1","termid":"PBO:0089634"}


id: MONDO:0012726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of hematuria (without proteinuria) with extrarenal manifestations: retinal arterial tortuosities responsible for retinal hemorrhages, cardiac arrhythmia, Raynaud phenomena and congenital muscular contractures.","definition_xrefs":["Orphanet:73229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"COL4A1-related disorder","termid":"MONDO:0800461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant familial hematuria-retinal arteriolar tortuosity-contractures syndrome","secondary_identifiers":["MEDGEN:382033","OMIM:611773","GARD:10889","ICD9:758.89","MESH:C567088","SCTID:702428000","UMLS:C2673195"],"synonyms":[{"name":"HANAC","type":"exact"},{"name":"HANAC syndrome","type":"exact"},{"name":"angiopathy, hereditary, with nephropathy, aneurysms, and muscle cramps","type":"exact"},{"name":"hereditary angiopathy with nephropathy, aneurysms, and muscle cramps syndrome","type":"related"},{"name":"hereditary angiopathy-nephropathy-aneurysms-muscle cramps syndrome","type":"exact"}],"termid":"MONDO:0012726","xrefs":{"Monarch":{"xref_id":"0012726"}}}


id: PBO:0053626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 670","termid":"PBO:0053626"}


id: MONDO:0013392
data:
  {"annotated_genes":["SJAG_01168"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87353],"is_not":false,"summary":null,"term":"MONDO:0013392"}]},"cv_name":"mondo","definition":"Any autosomal recessive cerebellar ataxia in which the cause of the disease is a mutation in the ANO10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01168":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17314","MEDGEN:462348","DOID:0050999","UMLS:C3150998","OMIM:613728","Orphanet:284289"],"synonyms":[{"name":"ANO10 autosomal recessive cerebellar ataxia","type":"exact"},{"name":"SCAR10","type":"exact"},{"name":"adult-onset autosomal recessive cerebellar ataxia","type":"related"},{"name":"autosomal recessive cerebellar ataxia caused by mutation in ANO10","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 10","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 10","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 10","type":"exact"}],"termid":"MONDO:0013392","terms_by_termid":{"MONDO:0013392":null},"xrefs":{"Monarch":{"xref_id":"0013392"}}}


id: PBO:0046751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 5 pseudogene 1","termid":"PBO:0046751"}


id: PBO:0077292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 35A","termid":"PBO:0077292"}


id: MOD:00899
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-palmitoyl-S-diacylglycerol-L-cysteine.","definition_xrefs":["RESID:AA0069#var","RESID:AA0107#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"N-palmitoyl-L-cysteine","termid":"MOD:00069"},{"relation_name":"has_functional_parent","term_name":"S-diacylglycerol-L-cysteine","termid":"MOD:00116"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-palmitoyl-S-diacylglycerol-L-cysteine","termid":"MOD:00899"}


id: PBO:0053025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine aminopeptidase 3 pseudogene 1","termid":"PBO:0053025"}


id: MONDO:0011733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasomnia, sleep bruxism type","secondary_identifiers":["UMLS:C1847399","MEDGEN:339751","OMIM:606840","MESH:C536389"],"synonyms":[{"name":"PSMNSB","type":"exact"},{"name":"faciomandibular myoclonus, nocturnal","type":"related"},{"name":"nocturnal facio-mandibular myoclonus","type":"related"},{"name":"parasomnia, Sleeptalking type","type":"related"},{"name":"parasomnia, sleep bruxism type","type":"exact"}],"termid":"MONDO:0011733","xrefs":{"Monarch":{"xref_id":"0011733"}}}


id: PBO:0090548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S17","termid":"PBO:0090548"}


id: PBO:0075235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 7","termid":"PBO:0075235"}


id: PR:Q9P7K1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.04","synonyms":[{"name":"Spom972h-SPCC24B10.04","type":"exact"}],"termid":"PR:Q9P7K1"}


id: PBO:0059304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L50","termid":"PBO:0059304"}


id: PBO:0073621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 7","termid":"PBO:0073621"}


id: MONDO:0003078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoblastoma that has spread beyond the eye e.g. to brain, soft tissue/bone, bone marrow.","definition_xrefs":["NCIT:C7848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"extraocular retinoblastoma","secondary_identifiers":["MEDGEN:75861","UMLS:C0278719","DOID:4656"],"synonyms":[{"name":"extraocular retinoblastoma","type":"exact"},{"name":"metastatic retinoblastoma","type":"exact"}],"termid":"MONDO:0003078","xrefs":{"Monarch":{"xref_id":"0003078"}}}


id: GO:0160248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine(27) in tRNA + 2 S-adenosyl-L-methionine = 2 H+ + N(2)-dimethylguanosine(27) in tRNA + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:39786998","PMID:39786990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003674","GO:0003824","GO:0016741","GO:0140101"],"is_obsolete":false,"name":"tRNA (guanine(27)-N2)-dimethyltransferase activity","termid":"GO:0160248"}


id: GO:0051347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transferase activity","synonyms":[{"name":"activation of transferase activity","type":"narrow"},{"name":"stimulation of transferase activity","type":"narrow"},{"name":"transferase activator","type":"exact"},{"name":"up regulation of transferase activity","type":"exact"},{"name":"up-regulation of transferase activity","type":"exact"},{"name":"upregulation of transferase activity","type":"exact"}],"termid":"GO:0051347"}


id: MONDO:1011311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Digestive system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digestive system disorder, non-human animal","termid":"MONDO:1011311","xrefs":{"Monarch":{"xref_id":"1011311"}}}


id: GO:0038013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which internalization of a Wnt receptor activates or increases the frequency, rate or extent of the Wnt signaling pathway.","definition_xrefs":["GOC:signaling","PMID:17908284","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway by Wnt receptor internalization (obsolete GO:0038013)","synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway by Frizzled internalization","type":"related"},{"name":"positive regulation of Wnt receptor signaling pathway by LRP6 internalization","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway by Wnt receptor internalization","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway by Wnt receptor endocytosis","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway by Wnt receptor internalization","type":"related"}],"termid":"GO:0038013"}


id: PBO:0051727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitory synaptic factor family member 2B","termid":"PBO:0051727"}


id: MONDO:0024615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid neoplasm","termid":"MONDO:0005157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"T-cell and NK-cell neoplasm","secondary_identifiers":["NCIT:C27908","MEDGEN:277781","UMLS:C1336554"],"synonyms":[{"name":"T-cell and NK-cell neoplasm","type":"exact"},{"name":"T-cell neoplasm","type":"exact"}],"termid":"MONDO:0024615","xrefs":{"Monarch":{"xref_id":"0024615"}}}


id: GO:0047596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylsalicylate + H+ = 3-cresol + CO2.","definition_xrefs":["EC:4.1.1.52","RHEA:23112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"6-methylsalicylate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03567","MetaCyc:6-METHYLSALICYLATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"6-MSA decarboxylase activity","type":"related"},{"name":"6-methylsalicylate carboxy-lyase (3-cresol-forming)","type":"related"},{"name":"6-methylsalicylate carboxy-lyase activity","type":"related"},{"name":"6-methylsalicylic acid (2,6-cresotic acid) decarboxylase activity","type":"related"}],"termid":"GO:0047596"}


id: GO:1990370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to aldehyde.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to aldehyde (obsolete GO:1990370)","termid":"GO:1990370"}


id: GO:0005212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the lens of an eye.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of eye lens","termid":"GO:0005212"}


id: PBO:0086851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of protein phosphatase Glc7p; involved in glycogen metabolism; contains a conserved motif (GVNK motif) that is also found in Gac1p, Pig1p, and Pig2p; GIP2 has a paralog, PIG2, that arose from the whole genome duplication","termid":"PBO:0086851"}


id: GO:1905428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant organ formation.","definition_xrefs":["GOC:tb","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"plant organ formation","termid":"GO:1905393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plant organ formation","termid":"GO:1905428"}


id: PBO:0075481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily C member 1","termid":"PBO:0075481"}


id: PR:O74564
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.11c","synonyms":[{"name":"Spom972h-wtf9","type":"exact"}],"termid":"PR:O74564"}


id: GO:0048038
data:
  {"annotated_genes":["SJAG_04223","SJAG_02398","SJAG_03198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71143],"is_not":false,"summary":null,"term":"GO:0048038"},{"annotations":[77152,115548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048039"}]},"cv_name":"molecular_function","definition":"Binding to a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_03198":null,"SJAG_04223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"quinone binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048038","terms_by_termid":{"GO:0048038":null,"GO:0048039":null}}


id: MONDO:0002803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intestinal pseudo-obstruction is a digestive disorder in whichthe intestinal walls are unable to contract normally (called hypomotility); the conditionresembles a true obstruction, but no actual blockage exists. Signs and symptoms may include abdominal pain; vomiting; diarrhea; constipation; malabsorption of nutrients leading to weight loss and/or failure to thrive ; and other symptoms. It may be classified as neuropathic (from lack of nerve function)or myopathic (from lack of muscle function), depending on the source of the abnormality. The condition is sometimes inherited (in an X-linked recessive or autosomal dominant manner)and may be caused by mutations in the FLNA gene; it may also be acquired after certain illnesses. The goal of treatment is to provide relief from symptoms andensure that nutritional support is adequate.","direct_ancestors":[{"relation_name":"is_a","term_name":"ileus","termid":"MONDO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal pseudo-obstruction","secondary_identifiers":["MEDGEN:5864","DOID:3878","GARD:6789","UMLS:C0021847","ICD9:569.89","MESH:D007418","SCTID:235825006","NCIT:C34733"],"synonyms":[{"name":"Chronic intestinal pseudo-obstruction.","type":"exact"},{"name":"hollow visceral myopathy","type":"related"},{"name":"intestinal pseudo-obstruction","type":"exact"},{"name":"intestinal pseudoobstruction","type":"related"},{"name":"intestine pseudoobstruction","type":"exact"},{"name":"pseudo-obstruction of intestine","type":"exact"}],"termid":"MONDO:0002803","xrefs":{"Monarch":{"xref_id":"0002803"}}}


id: PR:O13871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.06c gene.","definition_xrefs":["UniProtKB:O13871","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C1B3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.06c","synonyms":[{"name":"Spom972h-SPAC1B3.06c","type":"exact"}],"termid":"PR:O13871"}


id: PR:Q09807
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rim20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pH-response regulator protein palA/rim20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.05c","synonyms":[{"name":"Spom972h-rim20","type":"exact"}],"termid":"PR:Q09807"}


id: PBO:0059406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33 pseudogene 3","termid":"PBO:0059406"}


id: PBO:0028102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-respiratory_chain_complex_IV_absent_from_cell","termid":"PBO:0028102"}


id: _global:results_in_changes_to_anatomical_or_cellular_structure
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p has anatomical participant c iff p has participant c, and c is an anatomical entity","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_changes_to_anatomical_or_cellular_structure","secondary_identifiers":["RO:0040036"],"termid":"_global:results_in_changes_to_anatomical_or_cellular_structure"}


id: GO:0072684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Endonucleolytic cleavage of the 3'-end of the pre-tRNA as part of the process of generating the mature 3'-end of the tRNA in the mitochondrion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial tRNA 3'-trailer cleavage, endonucleolytic (obsolete GO:0072684)","synonyms":[{"name":"mitochondrial endonucleolytic tRNA 3'-end cleavage","type":"exact"},{"name":"mitochondrial endonucleolytic tRNA 3'-trailer cleavage","type":"related"},{"name":"mitochondrial tRNA 3'-end cleavage, endonucleolytic","type":"exact"}],"termid":"GO:0072684"}


id: PBO:0088242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 1","termid":"PBO:0088242"}


id: MONDO:0017311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with thoracic aortic aneurysm and aortic dissection (obsolete MONDO:0017311)","secondary_identifiers":["Orphanet:285014"],"termid":"MONDO:0017311","xrefs":{"Monarch":{"xref_id":"0017311"}}}


id: PBO:0068558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 9, pseudogene","termid":"PBO:0068558"}


id: PBO:0029592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029592"}


id: PBO:0050523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D11","termid":"PBO:0050523"}


id: GO:0160120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrial complex that catalyzes the oxidative decarboxylation of branched-chain alpha-keto acids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs. The complex is organized around a 24-meric cubic core of the dihydrolipoyl transacylase (E2) with multiple (about 6 to 12) copies of the branched-chain alpha-ketoacid dehydrogenase (E1, consisting of alpha and beta subunits), about 6 copies of the dimeric dihydrolipoyl dehydrogenase (E3), and a small number of copies of the E1-specific kinase and phosphatase.","definition_xrefs":["PMID:10745006","PMID:3593587","PMID:9582350"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial branched-chain alpha-keto acid dehydrogenase complex (obsolete GO:0160120)","synonyms":[{"name":"BCKD complex","type":"exact"}],"termid":"GO:0160120"}


id: GO:0047260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-D-glucose + glucose-6-phosphate = alpha,alpha-trehalose 6-phosphate + GDP.","definition_xrefs":["EC:2.4.1.36","MetaCyc:2.4.1.36-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (GDP-forming) activity","secondary_identifiers":["RHEA:14605"],"synonyms":[{"name":"GDP-glucose-glucosephosphate glucosyltransferase activity","type":"related"},{"name":"GDP-glucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"GDPglucose-glucose-phosphate glucosyltransferase activity","type":"related"},{"name":"GDPglucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"guanosine diphosphoglucose-glucose phosphate glucosyltransferase activity","type":"related"},{"name":"trehalose phosphate synthase (GDP-forming) activity","type":"related"}],"termid":"GO:0047260"}


id: GO:0034479
data:
  {"annotated_genes":["SJAG_02161"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98093],"is_not":false,"summary":null,"term":"GO:0034479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylglycerol + H2O = 1,2-diacylglycerol + glycerol 3-phosphate.","definition_xrefs":["PMID:18434318","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034479","terms_by_termid":{"GO:0034479":null}}


id: MOD:01012
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxidizes the disulfide bond of a cystine crosslink to form two cysteic acid residues.","definition_xrefs":["DeltaMass:335"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-cystine (cross-link)","termid":"MOD:00034"},{"relation_name":"is_a","term_name":"L-cysteic acid (L-cysteine sulfonic acid)","termid":"MOD:00460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"oxidation of disulfide crosslink in cystine to two cysteic acids","termid":"MOD:01012"}


id: GO:0003718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that brings about termination of transcription by RNA polymerase III.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III transcription termination factor activity (obsolete GO:0003718)","synonyms":[{"name":"Pol III transcription termination factor activity","type":"exact"},{"name":"RNA polymerase III transcription termination factor activity","type":"exact"}],"termid":"GO:0003718"}


id: MONDO:0002861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that arises from the testis. The majority of cases arise from teratomas or spermatocytic seminomas.","definition_xrefs":["NCIT:C6359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testis sarcoma","secondary_identifiers":["DOID:4062","UMLS:C1336727","MEDGEN:234943"],"synonyms":[{"name":"sarcoma of testis","type":"exact"},{"name":"sarcoma of the testis","type":"exact"},{"name":"testicular sarcoma","type":"exact"},{"name":"testis sarcoma","type":"exact"}],"termid":"MONDO:0002861","xrefs":{"Monarch":{"xref_id":"0002861"}}}


id: MONDO:1011783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha fucosidosis, non-human animal","secondary_identifiers":["OMIA:000396"],"termid":"MONDO:1011783","xrefs":{"Monarch":{"xref_id":"1011783"}}}


id: GO:0032367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"},{"relation_name":"is_a","term_name":"intracellular sterol transport","termid":"GO:0032366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"intracellular cholesterol transport","termid":"GO:0032367"}


id: PBO:0086022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays reduced frequency of mitochondrial genome loss","termid":"PBO:0086022"}


id: MONDO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The turning outward (eversion) of the edge of the eyelid, resulting in the exposure of the palpebral conjunctiva. (Dorland, 27th ed)","definition_xrefs":["MESH:D004483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ectropion","secondary_identifiers":["SCTID:62909004","DOID:1570","HP:0000656","ICD9:374.1","ICD9:374.10","MEDGEN:4448","UMLS:C0013592"],"synonyms":[{"name":"ectropion","type":"exact"},{"name":"ectropion (disease)","type":"exact"},{"name":"ectropion of eyelid","type":"exact"},{"name":"everted margin","type":"exact"}],"termid":"MONDO:0002043","xrefs":{"Monarch":{"xref_id":"0002043"}}}


id: GO:0102122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A34 + S-adenosyl-L-methionine = gibberellin A34 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A34 carboxyl methyltransferase activity (obsolete GO:0102122)","termid":"GO:0102122"}


id: PBO:0046851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas associated via death domain","termid":"PBO:0046851"}


id: GO:0051877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dispersed pigment granules towards the center of the cell.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pigment granule aggregation in cell center","termid":"GO:0051877"}


id: GO:0031652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of heat generation.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heat generation","termid":"GO:0031650"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heat generation","synonyms":[{"name":"activation of heat generation","type":"narrow"},{"name":"stimulation of heat generation","type":"narrow"},{"name":"up regulation of heat generation","type":"exact"},{"name":"up-regulation of heat generation","type":"exact"},{"name":"upregulation of heat generation","type":"exact"}],"termid":"GO:0031652"}


id: MONDO:0003901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histologically benign tumor, usually cystic with a vascular mural nodule, that is most often found in the cerebellum though it has been reported at other sites within the neuraxis. It is associated with von Hippel-Lindau disease (VHL gene located on chr 3p25-26).","definition_xrefs":["NCIT:C5146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial hemangioma","termid":"MONDO:0002328"},{"relation_name":"is_a","term_name":"hemangioblastoma","termid":"MONDO:0016748"},{"relation_name":"is_a","term_name":"benign neoplasm of cerebellum","termid":"MONDO:0021499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar hemangioblastoma","secondary_identifiers":["DOID:6500","MEDGEN:234108","UMLS:C1332900"],"synonyms":[{"name":"angioblastoma of cerebellum","type":"exact"},{"name":"angioblastoma of the cerebellum","type":"exact"},{"name":"cerebellar angioblastoma","type":"exact"},{"name":"cerebellar capillary hemangioblastoma","type":"exact"},{"name":"cerebellar hemangioblastoma","type":"exact"},{"name":"cerebellum hemangioblastoma","type":"exact"},{"name":"hemangioblastoma of cerebellum","type":"exact"},{"name":"hemangioblastoma of the cerebellum","type":"exact"}],"termid":"MONDO:0003901","xrefs":{"Monarch":{"xref_id":"0003901"}}}


id: PBO:0116613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3139","termid":"PBO:0116613"}


id: PBO:0058989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT11 transcription factor 7 cofactor","termid":"PBO:0058989"}


id: PBO:0029213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-irregular_cell_wall_during_vegetative_growth","termid":"PBO:0029213"}


id: PBO:0091744
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously assigned incorrectly as can1","termid":"PBO:0091744"}


id: PBO:0039802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 1","termid":"PBO:0039802"}


id: PBO:0089055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Adn2","termid":"PBO:0089055"}


id: MONDO:0005224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia (AML) characterized by blasts without evidence of maturation to more mature neutrophils. (WHO, 2001)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloblastic leukemia without maturation","secondary_identifiers":["ICDO:9873/3","GARD:526","NANDO:2200005","Orphanet:98833","SCTID:359640008","ONCOTREE:AWM","DOID:0081086","NCIT:C3249","EFO:0003027","UMLS:C0026998","MEDGEN:10232"],"synonyms":[{"name":"AML M1","type":"exact"},{"name":"AML without maturation","type":"exact"},{"name":"AWM","type":"related"},{"name":"FAB M1","type":"exact"},{"name":"M1 acute granulocytic leukaemia","type":"exact"},{"name":"M1 acute granulocytic leukaemia without maturation","type":"exact"},{"name":"M1 acute granulocytic leukemia","type":"exact"},{"name":"M1 acute granulocytic leukemia without maturation","type":"exact"},{"name":"M1 acute myeloblastic leukaemia","type":"exact"},{"name":"M1 acute myeloblastic leukaemia without maturation","type":"exact"},{"name":"M1 acute myeloblastic leukemia","type":"exact"},{"name":"M1 acute myeloblastic leukemia without maturation","type":"exact"},{"name":"M1 acute myelocytic leukaemia","type":"exact"},{"name":"M1 acute myelocytic leukaemia without maturation","type":"exact"},{"name":"M1 acute myelocytic leukemia","type":"exact"},{"name":"M1 acute myelocytic leukemia without maturation","type":"exact"},{"name":"M1 acute myelogenous leukaemia","type":"exact"},{"name":"M1 acute myelogenous leukaemia without maturation","type":"exact"},{"name":"M1 acute myelogenous leukemia","type":"exact"},{"name":"M1 acute myelogenous leukemia without maturation","type":"exact"},{"name":"M1 acute myeloid leukaemia","type":"exact"},{"name":"M1 acute myeloid leukaemia without maturation","type":"exact"},{"name":"M1 acute myeloid leukemia","type":"exact"},{"name":"M1 acute myeloid leukemia without maturation","type":"exact"},{"name":"acute M1 myeloid leukaemia","type":"exact"},{"name":"acute M1 myeloid leukemia","type":"exact"},{"name":"acute granulocytic leukaemia without maturation","type":"exact"},{"name":"acute granulocytic leukemia without maturation","type":"exact"},{"name":"acute myeloblastic leukaemia M1","type":"exact"},{"name":"acute myeloblastic leukaemia type 1","type":"related"},{"name":"acute myeloblastic leukemia M1","type":"exact"},{"name":"acute myeloblastic leukemia type 1","type":"related"},{"name":"acute myelocytic leukaemia without maturation","type":"exact"},{"name":"acute myelocytic leukemia without maturation","type":"exact"},{"name":"acute myelogenous leukaemia without maturation","type":"exact"},{"name":"acute myelogenous leukemia without maturation","type":"exact"},{"name":"acute myeloid leukaemia without maturation","type":"exact"},{"name":"acute myeloid leukaemia without maturation (FAB M1)","type":"exact"},{"name":"acute myeloid leukemia without maturation","type":"exact"},{"name":"acute myeloid leukemia without maturation (FAB M1)","type":"exact"}],"termid":"MONDO:0005224","xrefs":{"Monarch":{"xref_id":"0005224"}}}


id: MONDO:0009494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Ketoadipicaciduria (obsolete MONDO:0009494)","termid":"MONDO:0009494","xrefs":{"Monarch":{"xref_id":"0009494"}}}


id: MONDO:0015434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 18 syndrome is an autosomal anomaly characterized by variable clinical features, most commonly including hypotonia, neonatal feeding and respiratory difficulties, microcephaly, global developmental delay and intellectual disability, growth hormone deficiency, hypothyroidism, hearing loss, aural atresia, dysmorphic facial features and behavioral characteristics.","definition_xrefs":["Orphanet:1442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 18","secondary_identifiers":["SCTID:88154004","UMLS:C0265475","GARD:6077","MESH:C538304","MEDGEN:539285","NORD:943"],"synonyms":[{"name":"Chromosome 18 Ring","type":"exact"},{"name":"R18","type":"related"},{"name":"Ring 18","type":"related"},{"name":"Ring chromosome 18 syndrome","type":"related"},{"name":"Ring chromosome type 18","type":"exact"},{"name":"chromosome 18 ring","type":"related"}],"termid":"MONDO:0015434","xrefs":{"Monarch":{"xref_id":"0015434"}}}


id: MONDO:0002620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-disseminated osteosarcoma.","definition_xrefs":["NCIT:C7780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosarcoma","termid":"MONDO:0009807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"localized osteosarcoma","secondary_identifiers":["DOID:3356","MEDGEN:124467","UMLS:C0278511"],"synonyms":[{"name":"localised osteogenic sarcoma","type":"exact"},{"name":"localized osteogenic sarcoma","type":"exact"},{"name":"localized osteosarcoma","type":"exact"},{"name":"osteosarcoma, localised","type":"exact"},{"name":"osteosarcoma, localized","type":"exact"}],"termid":"MONDO:0002620","xrefs":{"Monarch":{"xref_id":"0002620"}}}


id: PBO:0080216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VIM antisense RNA 1","termid":"PBO:0080216"}


id: GO:0140373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of one or more ubiquitin groups to a lysine residue at position 14 of the histone.","definition_xrefs":["GOC:mah","PMID:31468675"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K14 ubiquitination (obsolete GO:0140373)","synonyms":[{"name":"histone H3 ubiquitination at K14","type":"exact"},{"name":"histone H3-K14 ubiquitylation","type":"exact"},{"name":"histone H3K14 ubiquitination","type":"exact"}],"termid":"GO:0140373"}


id: GO:0018323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-cysteine to form peptidyl-L-cysteine sulfinic acid.","definition_xrefs":["RESID:AA0262"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-cysteine sulfinic acid (obsolete GO:0018323)","synonyms":[{"name":"enzyme active site formation via L-cysteine sulphinic acid","type":"exact"}],"termid":"GO:0018323"}


id: PATO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001037 absolute life span (obsolete PATO:0001037)","termid":"PATO:0001037"}


id: MONDO:0851102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary artery disease","secondary_identifiers":["DOID:60001"],"termid":"MONDO:0851102","xrefs":{"Monarch":{"xref_id":"0851102"}}}


id: MONDO:0000921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm involving the ampulla of Vater.","definition_xrefs":["NCIT:C4443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct neoplasm","termid":"MONDO:0006709"},{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"ampulla of vater neoplasm","secondary_identifiers":["ONCOTREE:AMPULLAOFVATER","SCTID:126858004","MEDGEN:138029","DOID:10022","UMLS:C0345916"],"synonyms":[{"name":"AMPULLAOFVATER","type":"related"},{"name":"ampulla of Vater tumor","type":"exact"},{"name":"ampulla of Vater tumour","type":"exact"},{"name":"hepatopancreatic ampulla neoplasm","type":"exact"},{"name":"hepatopancreatic ampulla neoplasm (disease)","type":"exact"},{"name":"hepatopancreatic ampulla tumor","type":"exact"},{"name":"hepatopancreatic ampulla tumour","type":"exact"},{"name":"neoplasm of ampulla of Vater","type":"exact"},{"name":"neoplasm of hepatopancreatic ampulla","type":"exact"},{"name":"neoplasm of the ampulla of Vater","type":"exact"},{"name":"tumor of ampulla of Vater","type":"exact"},{"name":"tumor of hepatopancreatic ampulla","type":"exact"},{"name":"tumor of the ampulla of Vater","type":"exact"},{"name":"tumour of ampulla of Vater","type":"exact"},{"name":"tumour of hepatopancreatic ampulla","type":"exact"},{"name":"tumour of the ampulla of Vater","type":"exact"}],"termid":"MONDO:0000921","xrefs":{"Monarch":{"xref_id":"0000921"}}}


id: GO:0010056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of an atrichoblast.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell fate specification","termid":"GO:0090628"},{"relation_name":"part_of","term_name":"atrichoblast differentiation","termid":"GO:0010055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrichoblast fate specification","termid":"GO:0010056"}


id: PBO:0012061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase predicted to be involved in tRNA threonylcarbamoyladenosine modification Pgp1","termid":"PBO:0012061"}


id: PBO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calicin","termid":"PBO:0042133"}


id: PATO:0000033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/concentration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concentration of","synonyms":[{"name":"concentration","type":"exact"}],"termid":"PATO:0000033"}


id: PBO:0038561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABI family member 3","termid":"PBO:0038561"}


id: GO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose (a deoxyribonucleotide) within a cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular nucleoside transmembrane transporter activity (obsolete GO:0000259)","synonyms":[{"name":"intracellular nucleoside transmembrane transporter activity","type":"exact"}],"termid":"GO:0000259"}


id: PBO:0063879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class H","termid":"PBO:0063879"}


id: PBO:0018101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family transmembrane transporter (predicted)","termid":"PBO:0018101"}


id: PBO:0058445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5010","termid":"PBO:0058445"}


id: PBO:0055798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a) like 2, pseudogene","termid":"PBO:0055798"}


id: GO:1903040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an exon-exon junction complex.","definition_xrefs":["GOC:sart","PMID:17606899","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"exon-exon junction complex assembly","synonyms":[{"name":"EJC assembly","type":"exact"},{"name":"EJC formation","type":"exact"},{"name":"exon-exon junction complex formation","type":"exact"}],"termid":"GO:1903040"}


id: MONDO:0004817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of multiple myeloma in which the plasma cells synthesize but do not secrete immunoglobulins. As a result, none of the immunoglobulins appear out of the normal range. The symptoms are generally the same with those of immunoglobulin-secreting myeloma; however, the incidence of renal insufficiency is lower in non-secretory myeloma. The diagnosis can be missed because of the absence of monoclonal immunoglobulin in the serum or urine.","definition_xrefs":["NCIT:C4734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma cell myeloma","termid":"MONDO:0009693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"non-secretory plasma cell myeloma","secondary_identifiers":["MEDGEN:857719","DOID:9547","UMLS:C3898125","SCTID:277580004"],"synonyms":[{"name":"non-functioning myeloma","type":"related"},{"name":"non-secreting myeloma","type":"related"},{"name":"non-secretory multiple myeloma","type":"exact"},{"name":"non-secretory myeloma","type":"related"},{"name":"non-secretory plasma cell myeloma","type":"exact"}],"termid":"MONDO:0004817","xrefs":{"Monarch":{"xref_id":"0004817"}}}


id: GO:0018483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-oxohexanoate + NADP+ + H2O = adipate + NADPH + H+.","definition_xrefs":["EC:1.2.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6-oxohexanoate dehydrogenase activity","secondary_identifiers":["RHEA:13397","UM-BBD_reactionID:r0175","MetaCyc:6-OXOHEXANOATE-OXIDATION-RXN"],"synonyms":[{"name":"6-oxohexanoate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0018483"}


id: PBO:0005732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L22 (predicted)","termid":"PBO:0005732"}


id: GO:0033083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of immature T cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"immature T cell proliferation","termid":"GO:0033079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immature T cell proliferation","termid":"GO:0033083"}


id: FYPO:0005233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to an MCM complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the MCM complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PMID:12604790","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000702"],"is_obsolete":false,"name":"normal MCM complex binding","termid":"FYPO:0005233"}


id: PBO:0059049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic nuclear divisions 1","termid":"PBO:0059049"}


id: PBO:0031561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding","termid":"PBO:0031561"}


id: GO:0003834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-beta-carotene + O2 = 2 all-trans-retinal.","definition_xrefs":["RHEA:32887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"beta-carotene 15,15'-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-975635","KEGG_REACTION:R00032","EC:1.13.11.63","MetaCyc:RXN-13374"],"synonyms":[{"name":"beta-carotene 15,15'-monooxygenase activity","type":"related"},{"name":"carotene 15,15'-dioxygenase activity","type":"related"},{"name":"carotene dioxygenase activity","type":"related"}],"termid":"GO:0003834"}


id: PBO:0046977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member B3, pseudogene","termid":"PBO:0046977"}


id: MONDO:0012210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with aura, susceptibility to, 7","secondary_identifiers":["OMIM:609179","UMLS:C1836670","MEDGEN:373145"],"synonyms":[{"name":"Mgr7","type":"related"},{"name":"migraine with aura, susceptibility to, 7","type":"exact"},{"name":"migraine with aura, susceptibility to, type 7","type":"exact"}],"termid":"MONDO:0012210","xrefs":{"Monarch":{"xref_id":"0012210"}}}


id: FYECO:0000057
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was performed under conditions such that cAMP was produced endogenously.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000057 3'5'-cyclic AMP produced (obsolete FYECO:0000057)","termid":"FYECO:0000057"}


id: PBO:0080190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial growth factor C","termid":"PBO:0080190"}


id: GO:0072178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nephric duct are generated and organized. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"nephric duct development","termid":"GO:0072176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct morphogenesis","termid":"GO:0072178"}


id: PBO:0034325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_before","termid":"PBO:0034325"}


id: GO:1990767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the uptake of a prostaglandin receptor into an endocytic vesicle.","definition_xrefs":["PMID:15937517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"prostaglandin receptor internalization","termid":"GO:1990767"}


