# terms

id: GO:0043749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenol + MgATP + H2O = phenylphosphate + MgAMP + orthophosphate.","definition_xrefs":["PMID:15547277"],"gene_count":0,"genotype_count":0,"name":"obsolete phenol, water dikinase activity (obsolete GO:0043749)","synonyms":[{"name":"ATP:phenol:water phosphotransferase activity","type":"exact"},{"name":"phenol:water dikinase activity","type":"exact"},{"name":"phenylphosphate synthase activity","type":"exact"}],"termid":"GO:0043749"}


id: PBO:0046797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F2R like thrombin or trypsin receptor 3","termid":"PBO:0046797"}


id: MONDO:0002431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nonspecific interstitial pneumonia (obsolete MONDO:0002431)","termid":"MONDO:0002431","xrefs":{"Monarch":{"xref_id":"0002431"}}}


id: PBO:0089816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Ppk26","termid":"PBO:0089816"}


id: GO:0016865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for intramolecular oxidoreductases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intramolecular oxidoreductase activity, other intramolecular oxidoreductases (obsolete GO:0016865)","synonyms":[{"name":"intramolecular isomerase activity, other intramolecular oxidoreductases","type":"exact"},{"name":"intramolecular oxidoreductase activity, other intramolecular oxidoreductases","type":"exact"}],"termid":"GO:0016865"}


id: PBO:0028506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaerobic_cell_population_growth","termid":"PBO:0028506"}


id: GO:2001285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of BMP secretion.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of BMP secretion","termid":"GO:2001284"},{"relation_name":"negatively_regulates","term_name":"BMP secretion","termid":"GO:0038055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of BMP secretion","synonyms":[{"name":"negative regulation of BMP protein secretion","type":"exact"},{"name":"negative regulation of bone morphogenetic protein secretion","type":"exact"}],"termid":"GO:2001285"}


id: GO:0030172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to troponin C, the calcium-binding subunit of the troponin complex.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0008092","GO:0003674"],"is_obsolete":false,"name":"troponin C binding","termid":"GO:0030172"}


id: PR:Q10166
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An omega-amidase NIT2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01399","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase C26A3.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.11","secondary_identifiers":["UniProtKB:Q10166"],"synonyms":[{"name":"Spom972h-NIT2","type":"exact"}],"termid":"PR:Q10166"}


id: PBO:0060913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1","termid":"PBO:0060913"}


id: PBO:0053683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 870","termid":"PBO:0053683"}


id: PBO:0031030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolus_organization","termid":"PBO:0031030"}


id: GO:1901061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guaiacyl lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"guaiacyl lignin metabolic process","synonyms":[{"name":"G-lignin metabolic process","type":"exact"},{"name":"guaiacyl lignin metabolism","type":"exact"}],"termid":"GO:1901061"}


id: PBO:0017531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tryptophan-tRNA ligase Wrs1 (predicted)","termid":"PBO:0017531"}


id: PBO:0069525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 794, pseudogene","termid":"PBO:0069525"}


id: GO:2001195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lysine biosynthetic process via aminoadipic acid","termid":"GO:1902987"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:2001194"},{"relation_name":"negatively_regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"negative regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"negative regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001195"}


id: GO:0097157
data:
  {"annotated_genes":["SJAG_04497","SJAG_03383","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76396,101232,118459],"is_not":false,"summary":null,"term":"GO:0097157"}]},"cv_name":"molecular_function","definition":"Binding to an intronic sequence of a pre-messenger RNA (pre-mRNA).","definition_xrefs":["PMID:16260624","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-mRNA binding","termid":"GO:0036002"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02622":null,"SJAG_03383":null,"SJAG_04497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"pre-mRNA intronic binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pre-mRNA intron binding","type":"exact"},{"name":"pre-messenger RNA intronic binding","type":"exact"}],"termid":"GO:0097157","terms_by_termid":{"GO:0097157":null}}


id: PBO:0074021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 14 pseudogene 1","termid":"PBO:0074021"}


id: PBO:0044125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 11, pseudogene","termid":"PBO:0044125"}


id: PBO:0072489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 18","termid":"PBO:0072489"}


id: PBO:0033803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_DNA_double-strand_break","termid":"PBO:0033803"}


id: GO:0036153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of triacylglycerol, through sequential deacylation and re-acylation reactions, to generate triacylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["PMID:15364929","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol acyl-chain remodeling","termid":"GO:0036155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triglyceride acyl-chain remodeling","synonyms":[{"name":"triacylglycerol acyl-chain remodeling","type":"exact"},{"name":"triglyceride acyl-chain remodelling","type":"exact"}],"termid":"GO:0036153"}


id: GO:0106176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a clathrin-coated endocytic vesicle.","definition_xrefs":["PMID:2516741","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle lumen","termid":"GO:0071682"},{"relation_name":"part_of","term_name":"clathrin-coated endocytic vesicle","termid":"GO:0045334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin-coated endocytic vesicle lumen","termid":"GO:0106176"}


id: GO:0005614
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of extracellular matrix found in interstitial connective tissue, characterized by the presence of fibronectins, proteoglycans, and types I, III, V, VI, VII and XII collagens.","definition_xrefs":["PMID:33605520","PMID:39223427","PMID:8450001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"interstitial matrix","termid":"GO:0005614"}


id: PBO:0048560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha like","termid":"PBO:0048560"}


id: GO:0035227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of glutamate-cysteine ligase.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glutamate-cysteine ligase activity (obsolete GO:0035227)","termid":"GO:0035227"}


id: PBO:0113250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of four core subunits of the ESCRT-III complex; involved in the sorting of transmembrane proteins into the multivesicular body (MVB) pathway; recruited from the cytoplasm to endosomal membranes; subunit of the endosomal sorting complex required for transport III (ESCRT-III) that forms flat spirals on lipid monolayers as part of the complexes role in driving membrane abscission","termid":"PBO:0113250"}


id: GO:0033534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of verbascose, the pentasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose family oligosaccharide biosynthetic process","termid":"GO:0010325"},{"relation_name":"is_a","term_name":"verbascose metabolic process","termid":"GO:0033533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"verbascose biosynthetic process","synonyms":[{"name":"verbascose anabolism","type":"exact"},{"name":"verbascose biosynthesis","type":"exact"},{"name":"verbascose formation","type":"exact"},{"name":"verbascose synthesis","type":"exact"}],"termid":"GO:0033534"}


id: PBO:0068578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 29, pseudogene","termid":"PBO:0068578"}


id: PBO:0036076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_mitosis","termid":"PBO:0036076"}


id: MONDO:0005196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Presence of structurally anomalous spermatozoa in the semen; malformations include the physical bending of the sperm to produce kinks or bends","definition_xrefs":["EFO:0002625"],"gene_count":0,"genotype_count":0,"name":"obsolete teratozoospermia (obsolete MONDO:0005196)","secondary_identifiers":["SCTID:236817003"],"termid":"MONDO:0005196","xrefs":{"Monarch":{"xref_id":"0005196"}}}


id: MONDO:0018793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"temporomandibular joint disorder","termid":"MONDO:0005473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary condylar hyperplasia","secondary_identifiers":["MEDGEN:1799993","GARD:21966","Orphanet:477781","UMLS:C5568570"],"synonyms":[{"name":"type 1 condylar hyperplasia","type":"exact"}],"termid":"MONDO:0018793","xrefs":{"Monarch":{"xref_id":"0018793"}}}


id: GO:0003918
data:
  {"annotated_genes":["SJAG_05295","SJAG_03567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59251,68677],"is_not":false,"summary":null,"term":"GO:0003918"}]},"cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined, driven by ATP hydrolysis. The enzyme changes the linking number in multiples of 2.","definition_xrefs":["PMID:8811192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03567":null,"SJAG_05295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null},"secondary_identifiers":["EC:5.6.2.2","MetaCyc:5.99.1.3-RXN","GO:0061505","Wikipedia:Type_II_topoisomerase"],"synonyms":[{"name":"DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"DNA topoisomerase II","type":"narrow"},{"name":"DNA topoisomerase II activity","type":"narrow"},{"name":"DNA topoisomerase IV activity","type":"narrow"},{"name":"DNA topoisomerase type II activity","type":"exact"},{"name":"deoxyribonucleate topoisomerase","type":"broad"},{"name":"deoxyribonucleic topoisomerase activity","type":"broad"},{"name":"topoisomerase","type":"broad"},{"name":"topoisomerase II","type":"narrow"},{"name":"type II DNA topoisomerase activity","type":"related"}],"termid":"GO:0003918","terms_by_termid":{"GO:0003918":null}}


id: GO:0061456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal stem cell from one site to another contributing to the shaping of the ureteric bud. A mesenchymal stem cell, or MSC, is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in kidney development","termid":"GO:0035787"},{"relation_name":"part_of","term_name":"ureteric bud morphogenesis","termid":"GO:0060675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell migration involved in uteric bud morphogenesis","termid":"GO:0061456"}


id: GO:0005767
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Vacuole formed by the fusion of a lysosome with an organelle (autosome) or with a primary phagosome.","definition_xrefs":["GOC:jl","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"secondary lysosome","secondary_identifiers":["NIF_Subcellular:sao1549842807"],"termid":"GO:0005767"}


id: GO:0071467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:mah","Wikipedia:PH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to pH","termid":"GO:0071467"}


id: PR:O74463
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1739.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1739.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.01","synonyms":[{"name":"Spom972h-SPCC1739.01","type":"exact"}],"termid":"PR:O74463"}


id: PBO:0056941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-1 host gene","termid":"PBO:0056941"}


id: GO:1901987
data:
  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id: PBO:0029048
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id: PBO:0073797
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id: FYPO:0001558
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id: PBO:0052017
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id: _global:starts
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id: FYPO:0006077
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id: PBO:0111335
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id: PR:O13843
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dal1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoglycolate lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.04","synonyms":[{"name":"Spom972h-dal1","type":"exact"},{"name":"Ureidoglycolatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13843"}


id: MONDO:0003496
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometrial squamous cell carcinoma (obsolete MONDO:0003496)","termid":"MONDO:0003496","xrefs":{"Monarch":{"xref_id":"0003496"}}}


id: GO:0019694
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id: MONDO:0024532
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any otofaciocervical syndrome in which the cause of the disease is a mutation in the EYA1 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otofaciocervical syndrome","termid":"MONDO:0008163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otofaciocervical syndrome 1","secondary_identifiers":["MEDGEN:811516","OMIM:166780","UMLS:C3714941","GARD:16502"],"synonyms":[{"name":"EYA1 otofaciocervical syndrome","type":"exact"},{"name":"OFC","type":"broad"},{"name":"OFC1","type":"related"},{"name":"OTFCS","type":"broad"},{"name":"otofaciocervical syndrome","type":"broad"},{"name":"otofaciocervical syndrome 1","type":"exact"},{"name":"otofaciocervical syndrome caused by mutation in EYA1","type":"exact"}],"termid":"MONDO:0024532","xrefs":{"Monarch":{"xref_id":"0024532"}}}


id: PBO:0090526
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa4","termid":"PBO:0090526"}


id: MONDO:0012884
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id: RO:0002463
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id: PBO:0054319
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1711","termid":"PBO:0054319"}


id: PBO:0000489
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  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein","termid":"PBO:0000489"}


id: GO:0051893
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id: MONDO:0016266
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"},{"relation_name":"is_a","term_name":"uterine corpus cancer","termid":"MONDO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"squamous cell carcinoma of the corpus uteri","secondary_identifiers":["MEDGEN:1633992","ICD10CM:C54.1","Orphanet:213716","GARD:20479","UMLS:C4707099"],"synonyms":[{"name":"body of uterus squamous cell carcinoma","type":"exact"},{"name":"endometrial squamous cell carcinoma","type":"related"}],"termid":"MONDO:0016266","xrefs":{"Monarch":{"xref_id":"0016266"}}}


id: GO:0006965
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria.","definition_xrefs":["GOC:mah","PMID:10973475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002816"},{"relation_name":"is_a","term_name":"positive regulation of antibacterial peptide biosynthetic process","termid":"GO:0006963"},{"relation_name":"positively_regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","synonyms":[{"name":"activation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"narrow"},{"name":"anti-Gram-positive bacterial peptide induction","type":"exact"},{"name":"anti-Gram-positive bacterial polypeptide induction","type":"exact"},{"name":"stimulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"narrow"},{"name":"up regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"},{"name":"up-regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"},{"name":"upregulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"}],"termid":"GO:0006965"}


id: MONDO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"excluded_subClassOf","term_name":"ichthyosis","termid":"MONDO:0019269"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ruzicka-Goerz-Anton syndrome","secondary_identifiers":["MEDGEN:444055","UMLS:C2931438","MESH:C537192"],"synonyms":[{"name":"Ruzicka Goerz Anton syndrome","type":"exact"},{"name":"ichthyosis congenita, neurosensory deafness, oligophrenia, dental aplasia, brachydactyly, clinodactyly, accessory cervical ribs and thyroid carcinoma","type":"related"},{"name":"ichthyosis deafness intellectual disability skeletal anomalies","type":"related"},{"name":"ichthyosis deafness mental retardation skeletal anomalies","type":"related"}],"termid":"MONDO:0042498","xrefs":{"Monarch":{"xref_id":"0042498"}}}


id: MONDO:0011646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal abductor paralysis with cerebellar ataxia and motor neuropathy","secondary_identifiers":["MESH:C565252","OMIM:606183","MEDGEN:381205","UMLS:C1853556"],"synonyms":[{"name":"laryngeal abductor paralysis with cerebellar ataxia and motor neuropathy","type":"exact"}],"termid":"MONDO:0011646","xrefs":{"Monarch":{"xref_id":"0011646"}}}


id: PBO:0042540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 7 pseudogene 1","termid":"PBO:0042540"}


id: PBO:0038919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G1","termid":"PBO:0038919"}


id: MONDO:0017932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular hypertrophy-hepatomegaly-polyhydramnios syndrome","secondary_identifiers":["UMLS:C4751007","MEDGEN:1665387","Orphanet:324416","GARD:21441"],"termid":"MONDO:0017932","xrefs":{"Monarch":{"xref_id":"0017932"}}}


id: PBO:0053502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 485","termid":"PBO:0053502"}


id: PBO:0044591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 2","termid":"PBO:0044591"}


id: GO:0018650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: styrene + NADPH + FADH + O2 = NADP+ + FAD+ + H2O + styrene oxide.","definition_xrefs":["UM-BBD_reactionID:r0225"],"gene_count":0,"genotype_count":0,"name":"obsolete styrene monooxygenase activity (obsolete GO:0018650)","termid":"GO:0018650"}


id: MONDO:0008481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylosis, cervical","secondary_identifiers":["SCTID:387800004","OMIM:184300","EFO:0009610","MEDGEN:235174","UMLS:C1384641"],"synonyms":[{"name":"spondylosis, cervical","type":"exact"}],"termid":"MONDO:0008481","xrefs":{"Monarch":{"xref_id":"0008481"}}}


id: GO:1903033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule plus-end binding.","definition_xrefs":["PMID:16148041","GOC:hjd","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of microtubule binding","termid":"GO:1904528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microtubule plus-end binding","synonyms":[{"name":"activation of microtubule plus-end binding","type":"narrow"},{"name":"up regulation of microtubule plus-end binding","type":"exact"},{"name":"up-regulation of microtubule plus-end binding","type":"exact"},{"name":"upregulation of microtubule plus-end binding","type":"exact"}],"termid":"GO:1903033"}


id: PBO:0085248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-tRNA hydrolase that releases stalled peptides from ribosomes, component of a Cdc48p-complex; involved in protein quality control; exhibits cytosolic and ER-membrane localization; contributes to ER-associated degradation (ERAD) of specific substrates at a step after their ubiquitination; translocates to mitochondria under oxidative stress and forms a complex with Cdc48p and Npl4p that is required for ubiquitin-mediated mitochondria-associated protein degradation (MAD)","termid":"PBO:0085248"}


id: PBO:0018076
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DCP1A","termid":"PBO:0018076"}


id: GO:0090362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor production","termid":"GO:0090361"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor production","termid":"GO:0090360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor production","termid":"GO:0090362"}


id: PR:O74374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoglucomutase-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03429","PRO:DNx","PANTHER:PTHR22573:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.10","secondary_identifiers":["UniProtKB:O74374"],"synonyms":[{"name":"PGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGM1","type":"exact"},{"name":"glucose phosphomutase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74374"}


id: GO:0032659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-16 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-16 production","termid":"GO:0032619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-16 production","secondary_identifiers":["GO:0045375"],"synonyms":[{"name":"regulation of IL-16 production","type":"exact"},{"name":"regulation of interleukin-16 biosynthetic process","type":"narrow"}],"termid":"GO:0032659"}


id: PBO:0081928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 970, pseudogene","termid":"PBO:0081928"}


id: GO:0050243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + NADP+ + pyruvate = acetyl-CoA + CO2 + NADPH.","definition_xrefs":["RHEA:17425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyruvate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:PYRUVATE-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R00210","EC:1.2.1.51"],"synonyms":[{"name":"pyruvate:NADP(+) oxidoreductase activity","type":"related"},{"name":"pyruvate:NADP+ 2-oxidoreductase (CoA-acetylating)","type":"related"},{"name":"pyruvate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050243"}


id: GO:0050045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta-D-glucosyl-D-glucose + phosphate = D-glucose + alpha-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"laminaribiose phosphorylase activity","secondary_identifiers":["MetaCyc:LAMINARIBIOSE-PHOSPHORYLASE-RXN","RHEA:16617"],"synonyms":[{"name":"3-beta-D-glucosyl-D-glucose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0050045"}


id: PBO:0046841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 14","termid":"PBO:0046841"}


id: PBO:0013773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg101","termid":"PBO:0013773"}


id: GO:0042686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast differentiation","termid":"GO:0051890"},{"relation_name":"is_a","term_name":"regulation of cardiac cell fate specification","termid":"GO:2000043"},{"relation_name":"regulates","term_name":"cardioblast cell fate specification","termid":"GO:0042685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardioblast cell fate specification","termid":"GO:0042686"}


id: GO:0050173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-phenylalanine + ATP = N-adenylyl-L-phenylalanine + diphosphate + 2 H+.","definition_xrefs":["EC:2.7.7.54"],"gene_count":0,"genotype_count":0,"name":"obsolete phenylalanine adenylyltransferase activity (obsolete GO:0050173)","synonyms":[{"name":"ATP:L-phenylalanine adenylyltransferase activity","type":"related"},{"name":"ATP:phenylalanine adenylyltransferase activity","type":"exact"},{"name":"L-phenylalanine adenylyltransferase activity","type":"related"}],"termid":"GO:0050173"}


id: GO:0045660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte differentiation","termid":"GO:0030854"},{"relation_name":"is_a","term_name":"regulation of neutrophil differentiation","termid":"GO:0045658"},{"relation_name":"positively_regulates","term_name":"neutrophil differentiation","termid":"GO:0030223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil differentiation","synonyms":[{"name":"activation of neutrophil differentiation","type":"narrow"},{"name":"stimulation of neutrophil differentiation","type":"narrow"},{"name":"up regulation of neutrophil differentiation","type":"exact"},{"name":"up-regulation of neutrophil differentiation","type":"exact"},{"name":"upregulation of neutrophil differentiation","type":"exact"}],"termid":"GO:0045660"}


id: GO:1901059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-hydroxyphenyl lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin catabolic process","termid":"GO:0046274"},{"relation_name":"is_a","term_name":"p-hydroxyphenyl lignin metabolic process","termid":"GO:1901058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"p-hydroxyphenyl lignin catabolic process","synonyms":[{"name":"H-lignin catabolic process","type":"exact"},{"name":"p-hydroxyphenyl lignin breakdown","type":"exact"},{"name":"p-hydroxyphenyl lignin catabolism","type":"exact"},{"name":"p-hydroxyphenyl lignin degradation","type":"exact"}],"termid":"GO:1901059"}


id: PBO:0080884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N6-threonylcarbamoyltransferase domain containing","termid":"PBO:0080884"}


id: GO:0006842
data:
  {"annotated_genes":["SJAG_01872","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71868,72875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"}]},"cv_name":"biological_process","definition":"The directed movement of tricarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"tricarboxylic acid transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0006842","terms_by_termid":{"GO:0006843":null}}


id: FYPO:0004775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-serine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular serine level","termid":"FYPO:0001728"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased vacuolar serine level","synonyms":[{"name":"increased level of serine in vacuole","type":"exact"},{"name":"increased vacuolar L-serine level","type":"exact"},{"name":"increased vacuolar serine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar serine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004775"}


id: MONDO:0020674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular insufficiency disorder","secondary_identifiers":["MEDGEN:534461","UMLS:C0232352","SCTID:86341008"],"synonyms":[{"name":"vascular insufficiency","type":"exact"}],"termid":"MONDO:0020674","xrefs":{"Monarch":{"xref_id":"0020674"}}}


id: PBO:0081510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 416","termid":"PBO:0081510"}


id: GO:0006851
data:
  {"annotated_genes":["SJAG_03399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"}]},"cv_name":"biological_process","definition":"The process in which a calcium ion (Ca2+) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8949215"],"synonyms":[{"name":"mitochondrial calcium transport","type":"exact"}],"termid":"GO:0006851","terms_by_termid":{"GO:0036444":null}}


id: GO:0035639
data:
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id: PATO:0002130
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition to invade surrounding tissues to a large extend.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic, invasive","termid":"PATO:0002129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, deeply invasive","termid":"PATO:0002130"}


id: PBO:0031434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_1-NA-PP1","termid":"PBO:0031434"}


id: MONDO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign breast neoplasm characterized by the proliferation of multiple papillomas.","definition_xrefs":["NCIT:C6977"],"gene_count":0,"genotype_count":0,"name":"obsolete breast papillomatosis (obsolete MONDO:0002063)","secondary_identifiers":["DOID:1634"],"synonyms":[{"name":"breast papillomatosis","type":"exact"},{"name":"papillomatosis of breast","type":"exact"},{"name":"papillomatosis of the breast","type":"exact"}],"termid":"MONDO:0002063","xrefs":{"Monarch":{"xref_id":"0002063"}}}


id: MONDO:1011427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, non-human animal","secondary_identifiers":["OMIA:001993"],"termid":"MONDO:1011427","xrefs":{"Monarch":{"xref_id":"1011427"}}}


id: PBO:0045317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxynucleotidyltransferase terminal interacting protein 2","termid":"PBO:0045317"}


id: PATO:0001036
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001036 relative life span (obsolete PATO:0001036)","termid":"PATO:0001036"}


id: GO:2000511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of granzyme A production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"granzyme A production","termid":"GO:0035746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of granzyme A production","termid":"GO:2000511"}


id: GO:0019882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["GOC:add","PMID:15771591","PMID:15928678","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation","secondary_identifiers":["GO:0030333","Wikipedia:Antigen_presentation"],"synonyms":[{"name":"antigen presentation","type":"exact"},{"name":"antigen processing","type":"exact"}],"termid":"GO:0019882"}


id: FYPO:0001363
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[119823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[119574,119578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[119868],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[119568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cellular metabolic process is abnormal in the vegetative growth phase of the life cycle. A metabolic process is any set of chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances.","definition_xrefs":["GO:0044237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02763":null,"SJAG_03940":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":6,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal metabolic process during vegetative growth","references_by_uniquename":{"PMID:26774782":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_03940","SJAG_00610","SJAG_04697","SJAG_04551","SJAG_01787"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck1delta","pck2delta","gms1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","nem2delta"],"synonyms":[{"name":"abnormal cellular metabolic process during vegetative growth","type":"exact"},{"name":"abnormal metabolic process during mitotic cell cycle","type":"related"},{"name":"abnormal metabolism during vegetative growth","type":"exact"}],"termid":"FYPO:0001363","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0003727":null,"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: GO:2000693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed maturation","termid":"GO:2000693"}


id: GO:0036160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a melanocyte-stimulating hormone, any of a group of peptide hormones that are produced by cells in the intermediate lobe of the pituitary gland, and stimulate the production of melanin to increase pigmentation.","definition_xrefs":["Wikipedia:Melanocyte-stimulating_hormone","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"melanocyte-stimulating hormone secretion","synonyms":[{"name":"MSH secretion","type":"exact"}],"termid":"GO:0036160"}


id: FYPO:0000066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of L-azetidine-2-carboxylic acid than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to L-azetidine-2-carboxylic acid","synonyms":[{"name":"resistance to (S)-azetidine-2-carboxylic acid","type":"exact"},{"name":"resistance to AZC","type":"broad"},{"name":"resistance to L-azetidine-2-carboxylic acid during mitotic cell cycle","type":"related"},{"name":"resistance to L-azetidine-2-carboxylic acid during vegetative growth","type":"exact"},{"name":"resistant to L-azetidine-2-carboxylic acid","type":"exact"}],"termid":"FYPO:0000066"}


id: PBO:0045701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 1A","termid":"PBO:0045701"}


id: MONDO:0004456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders related or resulting from use of cocaine.","definition_xrefs":["MESH:D019970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance abuse","termid":"MONDO:0002491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cocaine abuse","secondary_identifiers":["SCTID:78267003","UMLS:C0009171","ICD9:305.60","MEDGEN:3136","ICD9:305.6","DOID:809"],"termid":"MONDO:0004456","xrefs":{"Monarch":{"xref_id":"0004456"}}}


id: MONDO:0054740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any blepharo-cheilo-odontic syndrome in which the cause of the disease is a mutation in the CDH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharocheilodontic syndrome","termid":"MONDO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"blepharocheilodontic syndrome 1","secondary_identifiers":["DOID:0080345","OMIM:119580","MEDGEN:1632198","UMLS:C4551988"],"synonyms":[{"name":"BCD syndrome","type":"related"},{"name":"BCDS1","type":"related"},{"name":"CDH1 blepharo-cheilo-odontic syndrome","type":"exact"},{"name":"Lagophthalmia with bilateral cleft 51P and palate","type":"related"},{"name":"blepharo-cheilo-odontic syndrome caused by mutation in CDH1","type":"exact"},{"name":"blepharocheilodontic syndrome","type":"related"},{"name":"blepharocheilodontic syndrome 1","type":"exact"},{"name":"clefting, ectropion, and conical teeth","type":"related"},{"name":"ectropion, Inferior, with cleft 51P and/Or palate","type":"related"},{"name":"elschnig syndrome","type":"related"}],"termid":"MONDO:0054740","xrefs":{"Monarch":{"xref_id":"0054740"}}}


id: MONDO:0014586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects, early-onset progressive muscle weakness, and kinetic abnormalities of the AChR channel that has material basis in homozygous or compound heterozygous mutation in the CHRNE gene on chromosome 17p13.","definition_xrefs":["PMID:25792100","PMID:8755487","DOID:0110677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 4","termid":"MONDO:1040021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 4B","secondary_identifiers":["OMIM:616324","MEDGEN:904424","GARD:16087","UMLS:C4225369"],"synonyms":[{"name":"CMS4B","type":"exact"},{"name":"congenital myasthenic syndrome 4B fast-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 4B","type":"exact"},{"name":"myasthenic syndrome, congenital, 4B, FAST-channel","type":"related"}],"termid":"MONDO:0014586","xrefs":{"Monarch":{"xref_id":"0014586"}}}


id: MONDO:0019452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This subgroup of myeloproliferative neoplasms includes cases which do not meet the morphologic criteria of any of the defined myeloproliferative neoplasms, or which have characteristics that overlap at least two of the myeloproliferative neoplasms.","definition_xrefs":["NCIT:C27350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"myeloproliferative neoplasm, unclassifiable","secondary_identifiers":["GARD:16764","ICDO:9975/3","MEDGEN:232365","UMLS:C1333046","Orphanet:86830"],"synonyms":[{"name":"CMPD, U","type":"exact"},{"name":"CMPD-U","type":"exact"},{"name":"MPN, U","type":"exact"},{"name":"MPN-U","type":"exact"},{"name":"chronic myeloproliferative disease, unclassifiable","type":"exact"},{"name":"chronic myeloproliferative disorder, unclassifiable","type":"exact"},{"name":"myeloproliferative neoplasm, unclassifiable","type":"exact"},{"name":"unclassifiable chronic myeloproliferative disease","type":"exact"},{"name":"unclassifiable chronic myeloproliferative disorder","type":"exact"},{"name":"undifferentiated myeloproliferative disease","type":"exact"}],"termid":"MONDO:0019452","xrefs":{"Monarch":{"xref_id":"0019452"}}}


id: GO:1901695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tyramine.","definition_xrefs":["GOC:TermGenie","PMID:21284755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyramine biosynthetic process","synonyms":[{"name":"tyramine anabolism","type":"exact"},{"name":"tyramine biosynthesis","type":"exact"},{"name":"tyramine formation","type":"exact"},{"name":"tyramine synthesis","type":"exact"}],"termid":"GO:1901695"}


id: GO:1905359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle.","definition_xrefs":["PMID:26696398","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to meiotic spindle","synonyms":[{"name":"protein localisation to meiotic spindle","type":"exact"}],"termid":"GO:1905359"}


id: SO:0000652
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 5S rRNA is an RNA component of the large subunit of cytosolic ribosomes in both prokaryotes and eukaryotes.","direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_5S_gene","termid":"SO:0002238"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_5S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/5S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 5S LSU rRNA","type":"exact"},{"name":"cytosolic 5S rRNA","type":"exact"},{"name":"cytosolic 5S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 5S","type":"exact"}],"termid":"SO:0000652"}


id: PATO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the side of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laterally rotated","synonyms":[{"name":"externally rotated","type":"exact"}],"termid":"PATO:0002156"}


id: PBO:0084793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; required for respiratory growth under some conditions and for stability of the mitochondrial genome; subunit of a complex containing Mrx6p, Pim1p, and Mam33p that may regulate mtDNA replication","termid":"PBO:0084793"}


id: PBO:0025540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-Q homolog Fta7","termid":"PBO:0025540"}


id: PR:P28748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:18422602","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1","termid":"PR:000027715"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.03c","secondary_identifiers":["UniProtKB:P28748","PR:000027716"],"synonyms":[{"name":"SPBC1289.03C","type":"related"},{"name":"Spom972h-spi1","type":"exact"}],"termid":"PR:P28748"}


id: PATO:0001310
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a bearer by virtue of the bearer's duration of exhibition of thermal energy.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duration of temperature","termid":"PATO:0001310"}


id: PBO:0039160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 5","termid":"PBO:0039160"}


id: PBO:0013099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP core protein Smg1","termid":"PBO:0013099"}


id: PBO:0068349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 126","termid":"PBO:0068349"}


id: PBO:0070105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 19 pseudogene","termid":"PBO:0070105"}


id: RO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite-of in which the parasite is partially an endoparasite and partially an ectoparasite","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoparasite_of","termid":"RO:0002636"}


id: PBO:0090405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidyl transferase Rev1","termid":"PBO:0090405"}


id: MONDO:0017164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic disease of the newborn with Kell alloimmunization","secondary_identifiers":["MEDGEN:632769","GARD:21038","UMLS:C0472751","Orphanet:275944"],"synonyms":[{"name":"anti-K HDN","type":"exact"},{"name":"maternal anti-Kell alloimmunization","type":"exact"}],"termid":"MONDO:0017164","xrefs":{"Monarch":{"xref_id":"0017164"}}}


id: PR:Q09171
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate dehydrogenase E1 component subunit beta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11624:SF11","OMA:SCHPO03549","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 component subunit beta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.13c","secondary_identifiers":["UniProtKB:Q09171"],"synonyms":[{"name":"PDHE1-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PDHB","type":"exact"}],"termid":"PR:Q09171"}


id: PBO:0091640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing","termid":"PBO:0091640"}


id: PBO:0050811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUS1 checkpoint clamp component B","termid":"PBO:0050811"}


id: PBO:0028930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_growing_cell_tip","termid":"PBO:0028930"}


id: FYPO:0005966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of potassium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal potassium import","synonyms":[{"name":"abnormal cellular potassium import","type":"exact"},{"name":"abnormal potassium import across plasma membrane","type":"exact"},{"name":"abnormal potassium import during mitotic cell cycle","type":"related"},{"name":"abnormal potassium import during vegetative growth","type":"exact"},{"name":"abnormal potassium import into cell","type":"exact"},{"name":"abnormal potassium ion import","type":"exact"}],"termid":"FYPO:0005966"}


id: PBO:0091946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent glutamate dehydrogenase Gdh2","termid":"PBO:0091946"}


id: GO:0070688
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that can methylate lysine-4 of histone H3 and plays an essential role in retinoic-acid-induced granulopoiesis. MLL5 is the catalytic methyltransferase subunit, and the complex also contains serine/threonine kinase 38 (STK38), protein phosphatase 1 catalytic subunits, the host cell factor-1 N-terminal subunit, beta-actin, and O-GlcNAc transferase; the human genes encoding the subunits are MLL5, STK38, PPP1CA, PPP1CB, PPP1CC, HCFC1, ACTB and OGT, respectively.","definition_xrefs":["PMID:19377461","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete MLL5-L complex (obsolete GO:0070688)","termid":"GO:0070688"}


id: PBO:0031840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_lipid_particle_morphology","termid":"PBO:0031840"}


id: GO:0098036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites to produce 3' protruding ends.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging, 3' extended cos packaging","termid":"GO:0098036"}


id: GO:1901351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["GOC:dgf","PMID:12869188","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"regulation of phosphatidylglycerol formation","type":"exact"},{"name":"regulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901351"}


id: PR:Q92365
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.05","synonyms":[{"name":"Spom972h-rpl3601","type":"exact"}],"termid":"PR:Q92365"}


id: PBO:0077289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 30C, pseudogene","termid":"PBO:0077289"}


id: GO:0015459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a potassium channel.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"},{"relation_name":"regulates","term_name":"potassium channel activity","termid":"GO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0022857"},{"rel_name":"regulates","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"potassium channel regulator activity","synonyms":[{"name":"potassium channel gating activity","type":"exact"}],"termid":"GO:0015459"}


id: PBO:0088288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab-specific(Ryh1/Ypt6) Ric1-Rgp1 guanyl-nucleotide exchange factor subunit Ric1/Sat4","termid":"PBO:0088288"}


id: PBO:0045706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 4","termid":"PBO:0045706"}


id: GO:0051481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the concentration of calcium ions in the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytosolic calcium ion concentration","synonyms":[{"name":"cytoplasmic calcium ion concentration reduction","type":"broad"},{"name":"cytosolic calcium ion concentration reduction","type":"exact"},{"name":"reduction of calcium ion concentration in cytoplasm","type":"broad"},{"name":"reduction of calcium ion concentration in cytosol","type":"exact"},{"name":"reduction of cytoplasmic calcium ion concentration","type":"broad"},{"name":"reduction of cytosolic calcium ion concentration","type":"exact"}],"termid":"GO:0051481"}


id: PBO:0080304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 68 pseudogene","termid":"PBO:0080304"}


id: PBO:0049716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 2","termid":"PBO:0049716"}


id: GO:0046818
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A location in the host cell nucleus where viral proteins colocalize late in infection prior to the onset of viral DNA synthesis. More than one site can be present simultaneously.","definition_xrefs":["PMID:10233976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"dense nuclear body","termid":"GO:0046818"}


id: PBO:0031639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_shmoo_formation","termid":"PBO:0031639"}


id: PBO:0090029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase binding protein Rid1","termid":"PBO:0090029"}


id: GO:0043150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA that contributes to the process of double-strand break repair via homologous recombination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in double-strand break repair via homologous recombination","synonyms":[{"name":"DNA synthesis during double-strand break repair via homologous recombination","type":"related"}],"termid":"GO:0043150"}


id: MONDO:0014074
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85476],"is_not":false,"summary":null,"term":"MONDO:0014074"}]},"cv_name":"mondo","definition":"Autosomal dominant intermediate Charcot-Marie-Tooth disease type F is a rare hereditary motor and sensory neuropathy disorder characterized by the typical CMT phenotype (slowly progressive distal muscle atrophy and weakness in upper and lower limbs, distal sensory loss in extremities, reduced or absent deep tendon reflexes and foot deformities) with nerve biopsy demonstrating demyelinating and axonal changes and nerve conduction velocities varying from the demyelinating to axonal range.","definition_xrefs":["Orphanet:352670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0019548"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease dominant intermediate F","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4749463","OMIM:615185","GARD:9206","DOID:0110206","MEDGEN:1666273"],"synonyms":[{"name":"CMTDIF","type":"exact"},{"name":"Charcot-Marie-Tooth disease dominant intermediate type F","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant Intermediate type F","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant intermediate F","type":"related"},{"name":"DI-CMTF","type":"related"},{"name":"GNB4-related intermediate Charcot-Marie-Tooth neuropathy","type":"related"},{"name":"autosomal dominant intermediate Charcot-Marie-Tooth disease type F","type":"exact"}],"termid":"MONDO:0014074","terms_by_termid":{"MONDO:0014074":null},"xrefs":{"Monarch":{"xref_id":"0014074"}}}


id: PBO:0040531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-N-acetylgalactosaminyltransferase 1 pseudogene 1","termid":"PBO:0040531"}


id: PBO:0029242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_repression_of_transcription_during_cellular_response_to_zinc","termid":"PBO:0029242"}


id: PBO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene malic acid transport protein","termid":"PBO:0000059"}


id: PBO:0047954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(19)(q13)","termid":"PBO:0047954"}


id: GO:0120292
data:
  {"annotated_genes":["SJAG_03300","SJAG_02214","SJAG_01584"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89322,106460,116746],"is_not":false,"summary":null,"term":"GO:0120292"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic recombination-dependent replication fork processing. Regulation of mitotic recombination prevents recombination between inappropriate homologous sequences. Proteins involved in homologous recombination are required for replication restart.","definition_xrefs":["PMID:23093942","PMID:31149897","PMID:28586299","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of mitotic recombination-dependent replication fork processing","termid":"GO:1903221"},{"relation_name":"positively_regulates","term_name":"mitotic recombination-dependent replication fork processing","termid":"GO:1990426"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01584":null,"SJAG_02214":null,"SJAG_03300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic recombination-dependent replication fork processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of homologous recombination dependent replication fork recovery","type":"related"},{"name":"positive regulation of mitotic recombination involved in replication fork processing","type":"related"},{"name":"positive regulation of recombination-dependent DNA replication","type":"exact"}],"termid":"GO:0120292","terms_by_termid":{"GO:0120292":null}}


id: MONDO:0005717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious dermatitis of sheep and goats, affecting primarily the muzzle and lips. It is caused by a poxvirus and may be transmitted to humans.","definition_xrefs":["MESH:D004474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contagious pustular dermatitis","secondary_identifiers":["SCTID:74050005","ICD9:051.2","EFO:0007222","UMLS:C0013570","MEDGEN:41702","DOID:8771"],"synonyms":[{"name":"Orf","type":"exact"},{"name":"ecthyma contagiosum","type":"exact"},{"name":"ecthyma, Contagious","type":"exact"},{"name":"scabby mouth","type":"exact"},{"name":"sheep pox","type":"exact"},{"name":"thistle disease","type":"exact"}],"termid":"MONDO:0005717","xrefs":{"Monarch":{"xref_id":"0005717"}}}


id: GO:0070978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cellular protein complex assembly that results in the formation of a voltage-gated calcium channel complex.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"voltage-gated calcium channel complex assembly","termid":"GO:0070978"}


id: PR:P40371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.02","synonyms":[{"name":"PP2C-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ptc1","type":"exact"}],"termid":"PR:P40371"}


id: GO:0048490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicle along axonal microtubules from the cell body to the presynapse.","definition_xrefs":["GOC:lmg","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"synaptic vesicle transport along microtubule","termid":"GO:0099517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"anterograde synaptic vesicle transport","synonyms":[{"name":"anterograde axonal transport of synaptic vesicle","type":"exact"}],"termid":"GO:0048490"}


id: MONDO:0800366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal dominant 4","secondary_identifiers":["MEDGEN:815132","UMLS:C3808802","DOID:0070020"],"synonyms":[{"name":"DKCA4","type":"exact"}],"termid":"MONDO:0800366","xrefs":{"Monarch":{"xref_id":"0800366"}}}


id: MONDO:0014395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An amyotrophic lateral sclerosis that has material basis in mutation in the CHCHD10 gene on chromosome 22. It is characterized by adult onset of either frontotemporal dementia and/or amyotrophic lateral sclerosis.","definition_xrefs":["PMID:24934289","DOID:0060214","OMIM:615911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"frontotemporal dementia with motor neuron disease","termid":"MONDO:0017161"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 2","secondary_identifiers":["MEDGEN:863085","UMLS:C4014648","GARD:18397"],"synonyms":[{"name":"FTDALS2","type":"exact"},{"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 2","type":"exact"},{"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis type 2","type":"exact"}],"termid":"MONDO:0014395","xrefs":{"Monarch":{"xref_id":"0014395"}}}


id: PBO:0079243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 16","termid":"PBO:0079243"}


id: MONDO:0005516
data:
  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term referring to disorders characterized by abnormalities in the development of bones and cartilage.","definition_xrefs":["NCIT:C84978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone development 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development disorder","type":"narrow"},{"name":"congenital anomaly of cartilage","type":"narrow"},{"name":"congenital skeletal dysplasia","type":"exact"},{"name":"osteochondrodysplasia","type":"exact"},{"name":"osteochondrodysplasia syndrome","type":"exact"},{"name":"skeletal dysplasia","type":"related"}],"termid":"MONDO:0005516","terms_by_termid":{"MONDO:0007204":null,"MONDO:0008701":null,"MONDO:0008872":null,"MONDO:0009107":null,"MONDO:0009189":null,"MONDO:0009192":null,"MONDO:0009598":null,"MONDO:0009727":null,"MONDO:0009805":null,"MONDO:0009910":null,"MONDO:0010013":null,"MONDO:0010075":null,"MONDO:0010208":null,"MONDO:0010275":null,"MONDO:0010737":null,"MONDO:0010879":null,"MONDO:0010966":null,"MONDO:0011335":null,"MONDO:0012592":null,"MONDO:0012873":null,"MONDO:0013051":null,"MONDO:0013870":null,"MONDO:0013889":null,"MONDO:0014455":null,"MONDO:0014573":null,"MONDO:0014801":null,"MONDO:0018163":null,"MONDO:0019666":null,"MONDO:0030019":null,"MONDO:0030861":null,"MONDO:0032724":null,"MONDO:0032885":null,"MONDO:0054561":null,"MONDO:0958006":null},"xrefs":{"Monarch":{"xref_id":"0005516"}}}


id: PBO:0004695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional corepressor Ssn6","termid":"PBO:0004695"}


id: GO:0018765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2Z,4E)-2-hydroxy-6-oxohepta-2,4-dienoate + H2O = (2Z)-2-hydroxypenta-2,4-dienoate + acetate + H+.","definition_xrefs":["RHEA:59220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-6-oxohepta-2,4-dienoate hydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r0263","EC:3.7.1.25","MetaCyc:2-OH-6-OXOHEPTA-2-4-DIENOATE-HYDR-RXN"],"termid":"GO:0018765"}


id: PBO:0048590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 4 pseudogene","termid":"PBO:0048590"}


id: PBO:0027392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phospholipid:diacylglycerol_acyltransferase_activity","termid":"PBO:0027392"}


id: GO:0046057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009184"},{"relation_name":"is_a","term_name":"dADP metabolic process","termid":"GO:0046056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dADP catabolic process","synonyms":[{"name":"dADP breakdown","type":"exact"},{"name":"dADP catabolism","type":"exact"},{"name":"dADP degradation","type":"exact"}],"termid":"GO:0046057"}


id: FYPO:0001429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a larger volume, greater length, greater diameter, and greater length:diameter ratio than normal.","definition_xrefs":["PMID:10388806","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen cell","termid":"FYPO:0000025"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"swollen elongated cell","synonyms":[{"name":"elongated cell with increased cell volume","type":"exact"},{"name":"enlarged elongated cell","type":"related"},{"name":"large elongated cell","type":"related"}],"termid":"FYPO:0001429"}


id: FYPO:0004701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a cell does not alter the timing or rate of cell division when shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:689088","PomBase:mah","PMID:872891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"abolished cell division timing change upon nitrogen source shift","synonyms":[{"name":"abolished cell division rate change upon nitrogen source shift","type":"related"},{"name":"abolished change in cell division rate upon nitrogen source shift","type":"related"},{"name":"abolished change in cell division timing upon nitrogen source shift","type":"exact"},{"name":"abolished nutritional modulation of cell division","type":"related"},{"name":"unchanged cell division timing upon nitrogen source shift","type":"related"}],"termid":"FYPO:0004701"}


id: PBO:0064066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 100","termid":"PBO:0064066"}


id: GO:0018495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxycyclohexane-1-carboxyl-CoA = 2 H+ + 2 e- + 2-ketocyclohexane-1-carboxyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxycyclohexane-1-carboxyl-CoA dehydrogenase activity (obsolete GO:0018495)","termid":"GO:0018495"}


id: PBO:0041738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathelicidin antimicrobial peptide","termid":"PBO:0041738"}


id: PBO:0082057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase; catalyzes the first step in aromatic amino acid biosynthesis and is feedback-inhibited by phenylalanine or high concentration of tyrosine or tryptophan","termid":"PBO:0082057"}


id: PBO:0057427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 549a","termid":"PBO:0057427"}


id: GO:0010625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency or rate of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"is_a","term_name":"positive regulation of glial cell proliferation","termid":"GO:0060252"},{"relation_name":"positively_regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell proliferation","termid":"GO:0010625"}


id: MONDO:0100089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-Linked cytopenia characterized by anemia and/or thrombocytopenia. Additional features including platelet dysfunction, dyserythropoesis, mild beta-thalassemia, neutropenia, or congenital erythropoetic porphyria may be present. These GATA1 variants are germline as opposed to GATA1 variants seen in leukemia.","definition_xrefs":["PMID:20301538","PMID:28895773","PMID:18930124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"GATA1-Related X-Linked Cytopenia","secondary_identifiers":["MEDGEN:335283","UMLS:C1845837"],"synonyms":[{"name":"GATA1-Related Cytopenia","type":"exact"},{"name":"GATA1-Related X-Linked Cytopenia","type":"exact"}],"termid":"MONDO:0100089","xrefs":{"Monarch":{"xref_id":"0100089"}}}


id: GO:1901494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"regulates","term_name":"cysteine metabolic process","termid":"GO:0006534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"regulation of cysteine metabolic process","synonyms":[{"name":"regulation of cysteine metabolism","type":"exact"}],"termid":"GO:1901494"}


id: PBO:0053338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 205","termid":"PBO:0053338"}


id: PBO:0011410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-axis_of","termid":"PBO:0011410"}


id: MONDO:0100568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Mycobacterium tuberculosis, protection against (obsolete MONDO:0100568)","termid":"MONDO:0100568","xrefs":{"Monarch":{"xref_id":"0100568"}}}


id: PBO:0055227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2653","termid":"PBO:0055227"}


id: MONDO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of frontal sinusitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal sinusitis","termid":"MONDO:0001121"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute frontal sinusitis","secondary_identifiers":["SCTID:91038008","icd11.foundation:86893536","ICD10CM:J01.1","DOID:14225","ICD9:461.1","MEDGEN:510087","UMLS:C0155805"],"synonyms":[{"name":"frontal sinusitis, acute","type":"exact"}],"termid":"MONDO:0001912","xrefs":{"Monarch":{"xref_id":"0001912"}}}


id: PBO:0086247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may have a role in transcription elongation; forms a complex with Csn12p that is recruited to transcribed genes; possibly involved in splicing based on pre-mRNA accumulation defect for many intron-containing genes","termid":"PBO:0086247"}


id: PBO:0015221
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(2)","termid":"PBO:0015221"}


id: GO:1901249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung goblet cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lung goblet cell differentiation","termid":"GO:0060480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung goblet cell differentiation","synonyms":[{"name":"regulation of pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:1901249"}


id: PBO:0000162
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.1","termid":"PBO:0000162"}


id: GO:0051078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the controlled breakdown of the nuclear membranes during meiotic cell division occurs.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane disassembly","termid":"GO:0051081"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"meiotic nuclear membrane disassembly","synonyms":[{"name":"meiotic nuclear envelope breakdown","type":"related"},{"name":"meiotic nuclear envelope catabolism","type":"related"},{"name":"meiotic nuclear envelope degradation","type":"related"},{"name":"meiotic nuclear envelope disassembly","type":"related"}],"termid":"GO:0051078"}


id: MONDO:0002611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign epilepsy with centrotemporal spikes (obsolete MONDO:0002611)","termid":"MONDO:0002611","xrefs":{"Monarch":{"xref_id":"0002611"}}}


id: MONDO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear disorder","termid":"MONDO:0003276"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrosis of ear ossicle","secondary_identifiers":["ICD9:385.24","DOID:11783"],"synonyms":[{"name":"partial loss or necrosis of ear ossicles","type":"exact"}],"termid":"MONDO:0001365","xrefs":{"Monarch":{"xref_id":"0001365"}}}


id: MONDO:0003504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the anal canal. It includes well differentiated neuroendocrine tumors (low and intermediate grade) and poorly differentiated neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C5603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"rectum neuroendocrine neoplasm","termid":"MONDO:0003646"},{"relation_name":"is_a","term_name":"anal canal carcinoma","termid":"MONDO:0007108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anal canal neuroendocrine neoplasm","secondary_identifiers":["DOID:5545","SCTID:717917007","MEDGEN:231063","UMLS:C1332273"],"synonyms":[{"name":"anal canal NET","type":"related"},{"name":"anal canal neuroendocrine neoplasm","type":"exact"},{"name":"anal canal neuroendocrine tumor","type":"related"},{"name":"anal canal neuroendocrine tumor, well differentiated, low or intermediate grade","type":"related"},{"name":"anal canal neuroendocrine tumour","type":"related"},{"name":"anal neuroendocrine neoplasm","type":"exact"},{"name":"anal neuroendocrine tumor","type":"related"},{"name":"anal neuroendocrine tumour","type":"related"},{"name":"anus neuroendocrine neoplasm","type":"exact"},{"name":"anus neuroendocrine tumor","type":"related"},{"name":"anus neuroendocrine tumour","type":"related"},{"name":"neuroendocrine neoplasm of anal canal","type":"exact"},{"name":"neuroendocrine neoplasm of anus","type":"exact"},{"name":"neuroendocrine neoplasm of the anus","type":"exact"},{"name":"neuroendocrine tumor of anus","type":"related"},{"name":"neuroendocrine tumour of anus","type":"related"}],"termid":"MONDO:0003504","xrefs":{"Monarch":{"xref_id":"0003504"}}}


id: MONDO:0004176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the soft tissue, and occurring during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraosseous osteosarcoma","termid":"MONDO:0002621"},{"relation_name":"is_a","term_name":"pediatric osteosarcoma","termid":"MONDO:0002623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood extraosseous osteosarcoma","secondary_identifiers":["MEDGEN:232060","NCIT:C27376","UMLS:C1332968","DOID:7297"],"synonyms":[{"name":"childhood extraosseous osteosarcoma","type":"exact"},{"name":"childhood extraskeletal osteosarcoma","type":"exact"},{"name":"extraosseous osteosarcoma of childhood","type":"exact"},{"name":"paediatric extraosseous osteosarcoma","type":"exact"},{"name":"paediatric extraskeletal osteosarcoma","type":"exact"},{"name":"pediatric extraosseous osteosarcoma","type":"exact"},{"name":"pediatric extraskeletal osteosarcoma","type":"exact"}],"termid":"MONDO:0004176","xrefs":{"Monarch":{"xref_id":"0004176"}}}


id: MONDO:0014293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 2p21-p12.","definition_xrefs":["DOID:0110582","PMID:19159392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 58","secondary_identifiers":["UMLS:C3888210","GARD:18139","OMIM:615654","MEDGEN:854817"],"synonyms":[{"name":"DFNA58","type":"narrow"},{"name":"autosomal dominant deafness 58","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 58","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 58","type":"narrow"},{"name":"deafness, autosomal dominant 58","type":"narrow"}],"termid":"MONDO:0014293","xrefs":{"Monarch":{"xref_id":"0014293"}}}


id: MONDO:0100535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypodontia/oligodontia with orofacial cleft","secondary_identifiers":["MEDGEN:369662","UMLS:C1970118"],"termid":"MONDO:0100535","xrefs":{"Monarch":{"xref_id":"0100535"}}}


id: PR:O13719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- laf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIRM domain-containing protein laf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.12c","synonyms":[{"name":"Spom972h-laf1","type":"exact"},{"name":"clr6 L-associated factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13719"}


id: MONDO:0030716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 66","secondary_identifiers":["MEDGEN:1806298","DOID:0070565","OMIM:619799","UMLS:C5676945"],"synonyms":[{"name":"SPGF66","type":"exact"},{"name":"spermatogenic failure 66","type":"exact"}],"termid":"MONDO:0030716","xrefs":{"Monarch":{"xref_id":"0030716"}}}


id: PBO:0066920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 222","termid":"PBO:0066920"}


id: MOD:00863
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to D-allo-threonine.","definition_xrefs":["PubMed:18025465","PubMed:6893271","ChEBI:32826","RESID:AA0199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-allo-threonine","synonyms":[{"name":"(2R,3R)-2-amino-3-hydroxybutanoic acid","type":"exact"},{"name":"D-Thr","type":"exact"},{"name":"D-threonine","type":"exact"},{"name":"MOD_RES D-threonine","type":"exact"}],"termid":"MOD:00863"}


id: PATO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's motion characteristic.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flow rate","termid":"PATO:0001574"}


id: PBO:0034534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_sister_chromatid_cohesion_at_centromere","termid":"PBO:0034534"}


id: GO:0003436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix and contributes to the shaping of the growth plate cartilage of an endochondral bone.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"part_of","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion involved in growth plate cartilage morphogenesis","termid":"GO:0003436"}


id: GO:0019078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A form of viral release in which the viral particles bud out through cellular membranes, resulting in cell lysis. It is also a form of viral envelopment.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete lytic viral budding (obsolete GO:0019078)","synonyms":[{"name":"lytic viral budding","type":"exact"}],"termid":"GO:0019078"}


id: PBO:0045110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylglycine dehydrogenase","termid":"PBO:0045110"}


id: GO:1901563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a camptothecin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to camptothecin","synonyms":[{"name":"response to CPT","type":"exact"}],"termid":"GO:1901563"}


id: PBO:0028302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitosis","termid":"PBO:0028302"}


id: GO:0070566
data:
  {"annotated_genes":["SJAG_03896","SJAG_02889","SJAG_00797","SJAG_02725","SJAG_02370","SJAG_01937","SJAG_02288","SJAG_02383","SJAG_02720","SJAG_01500","SJAG_01704","SJAG_04946","SJAG_03257","SJAG_01352","SJAG_03475","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62269],"is_not":false,"summary":null,"term":"GO:0070566"},{"annotations":[75266,70616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052929"},{"annotations":[97331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141192"},{"annotations":[78914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003919"},{"annotations":[75079,71023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000309"},{"annotations":[75081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004515"},{"annotations":[96576,69389,78546,64107,69254,59199,79332,76703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990817"},{"annotations":[66973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004781"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an adenylyl group to an acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01176":null,"SJAG_01352":null,"SJAG_01500":null,"SJAG_01704":null,"SJAG_01937":null,"SJAG_02288":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02720":null,"SJAG_02725":null,"SJAG_02889":null,"SJAG_03257":null,"SJAG_03475":null,"SJAG_03896":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070566","terms_by_termid":{"GO:0000309":null,"GO:0003919":null,"GO:0004515":null,"GO:0004781":null,"GO:0052929":null,"GO:0070566":null,"GO:0141192":null,"GO:1990817":null}}


id: MONDO:1011468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, domestic cat","secondary_identifiers":["OMIA:000037-9685"],"termid":"MONDO:1011468","xrefs":{"Monarch":{"xref_id":"1011468"}}}


id: PBO:0027211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_amino_acid_import_gene_mRNA_during_vegetative_growth","termid":"PBO:0027211"}


id: GO:0050953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of light stimulus","termid":"GO:0050953"}


id: GO:0035218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the leg imaginal disc over time, from its initial formation through to its metamorphosis to form adult structures including the leg, coxa and ventral thoracic pleura.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc development","termid":"GO:0035218"}


id: PBO:0041950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 pseudogene 1","termid":"PBO:0041950"}


id: MONDO:0035473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary lymphedema characterized by extensive, multisegmental lymphedema, associated with persistent, widespread infections with various genital high- and low-risk human papillomaviruses, resulting in multifocal anogenital dysplasia. Laboratory examination shows abnormalities in lymphocyte subsets, in particular CD4+ T-cells. Epidermal nevi and capillary malformations have also been reported.","definition_xrefs":["Orphanet:568056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"warts-immunodeficiency-lymphedema-anogenital dysplasia syndrome","secondary_identifiers":["MEDGEN:1799992","UMLS:C5568569","GARD:22300"],"synonyms":[{"name":"WILD syndrome","type":"exact"},{"name":"disseminated warts-impaired cell-mediated immunity-primary lymphedema-anogenital dysplasia syndrome","type":"exact"}],"termid":"MONDO:0035473","xrefs":{"Monarch":{"xref_id":"0035473"}}}


id: PBO:0035784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_degradation_during_vegetative_growth","termid":"PBO:0035784"}


id: MOD:00129
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-retinylidene-L-lysine, the adduct of retinal.","definition_xrefs":["PubMed:6794028","Unimod:380#K","PubMed:6870827","RESID:AA0120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-retinylidene-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)-2,4,6,8-nonatetraenylidene]aminohexanoic acid","type":"exact"},{"name":"MOD_RES N6-(retinylidene)lysine","type":"exact"},{"name":"N6-retinal-L-lysine","type":"exact"},{"name":"N6-retinyl-lysine","type":"exact"},{"name":"N6-retinylidene-L-lysine","type":"exact"},{"name":"N6RetalLys","type":"exact"},{"name":"Retinylidene","type":"related"},{"name":"retinal","type":"related"}],"termid":"MOD:00129"}


id: PBO:0075260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 13","termid":"PBO:0075260"}


id: GO:0010295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-abscisate + H+ + NADPH + O2 = (+)-8'-hydroxyabscisate + H2O + NADP+.","definition_xrefs":["RHEA:12897","EC:1.14.14.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(+)-abscisic acid 8'-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.93-RXN","KEGG_REACTION:R07202"],"synonyms":[{"name":"(+)-ABA 8'-hydroxylase activity","type":"related"},{"name":"ABA 8'-Hydroxylase activity, Abscisate 8'-hydroxylase activity","type":"related"},{"name":"ABA 8'-hydroxylase activity","type":"related"},{"name":"abscisate,NADPH:oxygen oxidoreductase (8'-hydroxylating)","type":"related"},{"name":"abscisic acid 8'-hydroxylase activity","type":"exact"}],"termid":"GO:0010295"}


id: MONDO:0000030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"frontal lobe epilepsy","termid":"MONDO:0002612"},{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"},{"relation_name":"is_a","term_name":"variable-age onset focal epilepsy syndrome","termid":"MONDO:0800492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"sleep-related hypermotor epilepsy","secondary_identifiers":["OMIMPS:600513","MEDGEN:937685","UMLS:C4313718"],"synonyms":[{"name":"SHE","type":"exact"},{"name":"epilepsy, nocturnal frontal lobe","type":"exact"},{"name":"sleep-related hyperkinetic epilepsy","type":"exact"},{"name":"sleep-related hypermotor epilepsy","type":"exact"}],"termid":"MONDO:0000030","xrefs":{"Monarch":{"xref_id":"0000030"}}}


id: GO:0032982
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97971,118204],"is_not":false,"summary":null,"term":"GO:0032982"}]},"cv_name":"cellular_component","definition":"A supramolecular fiber containing myosin heavy chains, plus associated light chains and other proteins, in which the myosin heavy chains are arranged into a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"myosin filament","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"myosin thick filament","type":"related"},{"name":"thick filament","type":"related"}],"termid":"GO:0032982","terms_by_termid":{"GO:0032982":null}}


id: PBO:0112881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate dehydrogenase adaptor subunit Ymr31/Kgd4","termid":"PBO:0112881"}


id: PBO:0090150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain nuclear inner membrane protein Man1, Sad1 interacting factor","termid":"PBO:0090150"}


id: MONDO:0024797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brainstem neoplasm that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brainstem neoplasm","termid":"MONDO:0021228"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult brain stem neoplasm","secondary_identifiers":["UMLS:C1332192","MEDGEN:272292","NCIT:C5967"],"synonyms":[{"name":"adult brain stem neoplasm","type":"exact"},{"name":"adult brain stem tumor","type":"exact"},{"name":"adult brain stem tumour","type":"exact"},{"name":"adult brainstem neoplasm","type":"exact"},{"name":"adult brainstem tumor","type":"exact"},{"name":"adult brainstem tumour","type":"exact"},{"name":"brainstem neoplasm of adults","type":"exact"},{"name":"neoplasm of adult brain stem","type":"exact"},{"name":"neoplasm of adult brainstem","type":"exact"},{"name":"neoplasm of the adult brain stem","type":"exact"},{"name":"neoplasm of the adult brainstem","type":"exact"},{"name":"tumor of adult brain stem","type":"exact"},{"name":"tumor of adult brainstem","type":"exact"},{"name":"tumor of the adult brain stem","type":"exact"},{"name":"tumor of the adult brainstem","type":"exact"},{"name":"tumour of adult brain stem","type":"exact"},{"name":"tumour of adult brainstem","type":"exact"},{"name":"tumour of the adult brain stem","type":"exact"},{"name":"tumour of the adult brainstem","type":"exact"}],"termid":"MONDO:0024797","xrefs":{"Monarch":{"xref_id":"0024797"}}}


id: PR:Q9P7R6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3B subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20978:SF0","OMA:SCHPO03892","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C211.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.05","secondary_identifiers":["UniProtKB:Q9P7R6"],"synonyms":[{"name":"Spom972h-SF3B5","type":"exact"}],"termid":"PR:Q9P7R6"}


id: MONDO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving the use of nonliving objects (the \\\"fetish\\\").","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetishistic disorder","secondary_identifiers":["MESH:D005329","SCTID:59174009","MEDGEN:8827","ICD10CM:F65.0","NCIT:C94353","ICD9:302.81","DOID:1235","UMLS:C0015957"],"synonyms":[{"name":"fetishism","type":"exact"}],"termid":"MONDO:0001504","xrefs":{"Monarch":{"xref_id":"0001504"}}}


id: MONDO:0024359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central sleep apnea syndrome","termid":"MONDO:0004731"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central sleep apnea due to periodic breathing","secondary_identifiers":["MEDGEN:783212","UMLS:C3662057","ICD9:786.09","SCTID:85721000119105","ICD9:327.27"],"synonyms":[{"name":"central sleep apnea due to periodic breathing","type":"exact"}],"termid":"MONDO:0024359","xrefs":{"Monarch":{"xref_id":"0024359"}}}


id: PR:O14034
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.13 gene.","definition_xrefs":["UniProtKB:O14034","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized lyase C29B12.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.13","synonyms":[{"name":"Spom972h-SPAC29B12.13","type":"exact"}],"termid":"PR:O14034"}


id: GO:1905942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["PMID:19737525","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"}


id: PBO:0065077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 4","termid":"PBO:0065077"}


id: PBO:0090098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Rst2","termid":"PBO:0090098"}


id: PBO:0034548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_degradation","termid":"PBO:0034548"}


id: PBO:0036160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0036160"}


id: MONDO:0054677
data:
  {"annotated_genes":["SJAG_03155","SJAG_03104"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85546,85547],"is_not":false,"summary":null,"term":"MONDO:0054677"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03104":null,"SJAG_03155":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 33","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C174440","DOID:0111495","UMLS:C4540209","MEDGEN:1623699","OMIM:617713"],"synonyms":[{"name":"COXPD33","type":"related"},{"name":"combined oxidative phosphorylation deficiency 33","type":"exact"}],"termid":"MONDO:0054677","terms_by_termid":{"MONDO:0054677":null},"xrefs":{"Monarch":{"xref_id":"0054677"}}}


id: PBO:0077567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 273","termid":"PBO:0077567"}


id: PBO:0111792
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase","termid":"PBO:0111792"}


id: PBO:0027009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_tethering_at_nuclear_periphery","termid":"PBO:0027009"}


id: PBO:0028580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclease_activity","termid":"PBO:0028580"}


id: GO:0072539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires the specialized features of a T-helper 17 (Th17) cell. A Th17 cell is a CD4-positive, alpha-beta T cell with the phenotype RORgamma-t-positive that produces IL-17.","definition_xrefs":["GOC:BHF","CL:0000899","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell differentiation","termid":"GO:0042093"},{"relation_name":"part_of","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 cell differentiation","synonyms":[{"name":"T-helper 17 cell development","type":"related"}],"termid":"GO:0072539"}


id: GO:0052411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving chitin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by organism of cell wall chitin in other organism involved in symbiotic interaction (obsolete GO:0052411)","synonyms":[{"name":"metabolism by organism of cell wall chitin in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052411"}


id: GO:0051451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a myoblast from one site to another, often during the development of a multicellular organism. A myoblast is a cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:ai","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell migration","termid":"GO:0014812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast migration","termid":"GO:0051451"}


id: GO:0009992
data:
  {"annotated_genes":["SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92727],"is_not":false,"summary":null,"term":"GO:0009992"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of water within a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell volume homeostasis","termid":"GO:0006884"},{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular water homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular osmoregulation","type":"related"},{"name":"cellular water homeostasis","type":"exact"}],"termid":"GO:0009992","terms_by_termid":{"GO:0009992":null}}


id: GO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete secretory vesicle membrane (obsolete GO:0005804)","synonyms":[{"name":"secretory vesicle membrane","type":"exact"}],"termid":"GO:0005804"}


id: MONDO:0100213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked multiple congenital anomaly disorder with variable severity. The classic triad, which defines IFAP, is ichthyosis follicularis, atrichia, and photophobia. Some patients have additional features, including mental retardation, brain anomalies, Hirschsprung disease, corneal opacifications, kidney dysplasia, cryptorchidism, cleft palate, and skeletal malformations, particularly of the vertebrae, which constitutes BRESHECK syndrome.","definition_xrefs":["OMIM:308205"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation syndrome with skin/mucosae involvement (obsolete MONDO:0015331)","termid":"MONDO:0015331"},{"relation_name":"excluded_subClassOf","term_name":"X-linked ichthyosis syndrome","termid":"MONDO:0017269"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary alopecia (obsolete MONDO:0021034)","termid":"MONDO:0021034"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"IFAP syndrome","termid":"MONDO:0100212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"IFAP syndrome 1, with or without BRESHECK syndrome","secondary_identifiers":["GARD:15297","MESH:C536085","NANDO:2200999","MEDGEN:1746744","DOID:0111821","UMLS:C5399971"],"synonyms":[{"name":"IFAP syndrome with or without BRESHECK syndrome","type":"exact"},{"name":"IFAP syndrome with or without BRESHECK syndrome, X-linked recessive","type":"exact"},{"name":"IFAP/BRESHECK syndrome","type":"exact"},{"name":"ichthyosis follicularis atrichia photophobia syndrome","type":"related"},{"name":"ichthyosis follicularis, atrichia, and photophobia with or without brain anomalies, retardation, ectodermal dysplasia, skeletal malformations, Hirschsprung disease, Ear/eye anomalies, cleft palate/cryptorchidism, and kidney dysplasia/hypoplasia","type":"exact"},{"name":"ichthyosis follicularis-alopecia-photophobia syndrome","type":"broad"}],"termid":"MONDO:0100213","xrefs":{"Monarch":{"xref_id":"0100213"}}}


id: PBO:0080440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VRK serine/threonine kinase 1","termid":"PBO:0080440"}


id: MONDO:0014425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Hereditary persistence of alpha-fetoprotein is a benign genetic condition characterized by persistence of high alpha-fetoprotein (AFP) levels throughout life, with no associated clinical disability and thus no need for specific therapy","definition_xrefs":["Orphanet:168615"],"gene_count":0,"genotype_count":0,"name":"obsolete hereditary persistence of alpha-fetoprotein (obsolete MONDO:0014425)","secondary_identifiers":["SCTID:716697002","OMIM:615970"],"synonyms":[{"name":"ALPHA-fetoprotein, hereditary persistence OF","type":"related"},{"name":"HPAFP","type":"related"},{"name":"hereditary persistence of alpha-fetoprotein","type":"exact"}],"termid":"MONDO:0014425","xrefs":{"Monarch":{"xref_id":"0014425"}}}


id: PBO:0035983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0035983"}


id: PBO:0068115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 422","termid":"PBO:0068115"}


id: GO:0030061
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the inward folds of the mitochondrial inner membrane. Their number, extent, and shape differ in mitochondria from different tissues and organisms. They appear to be devices for increasing the surface area of the mitochondrial inner membrane, where the enzymes of electron transport and oxidative phosphorylation are found. Their shape can vary with the respiratory state of the mitochondria.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"mitochondrial crista","secondary_identifiers":["NIF_Subcellular:sao333328131"],"synonyms":[{"name":"cristae","type":"broad"},{"name":"mitochondrial cristae","type":"exact"}],"termid":"GO:0030061"}


id: PBO:0048444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 7","termid":"PBO:0048444"}


id: MONDO:0010046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 23 (SPG23) is a rare, complex type of hereditary spastic paraplegia that presents in childhood with progressive spastic paraplegia, associated with peripheral neuropathy, skin pigment abnormalities (i.e. vitiligo, hyperpigmentation, diffuse lentigines), premature graying of hair, and characteristic facies (i.e. thin with ''sharp'' features). The SPG23 phenotype has been mapped to a locus on chromosome 1q24-q32.","definition_xrefs":["Orphanet:101003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 23","secondary_identifiers":["MEDGEN:167094","SCTID:726608002","DOID:0110774","MESH:C536859","GARD:336","UMLS:C0796019","OMIM:270750"],"synonyms":[{"name":"DSTYK autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"Lison syndrome","type":"exact"},{"name":"SPG 23","type":"related"},{"name":"SPG23","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in DSTYK","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 23","type":"related"},{"name":"hereditary spastic paraplegia type 23","type":"exact"},{"name":"spastic paraparesis, vitiligo, premature graying, characteristic facies","type":"related"},{"name":"spastic paraparesis-vitiligo-premature graying-characteristic facies syndrome","type":"exact"},{"name":"spastic paraplegia 23","type":"exact"},{"name":"spastic paraplegia and pigmentary abnormalities","type":"related"},{"name":"spastic paraplegia vitiligo premature graying and characteristic facies","type":"related"},{"name":"spastic paraplegia vitiligo premature greying and characteristic facies","type":"related"},{"name":"spastic paraplegia with pigmentary abnormalities","type":"exact"}],"termid":"MONDO:0010046","xrefs":{"Monarch":{"xref_id":"0010046"}}}


id: PBO:0036229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl6","termid":"PBO:0036229"}


id: PBO:0002980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease (predicted)","termid":"PBO:0002980"}


id: MONDO:1011006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukodystrophy that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy, non-human animal","termid":"MONDO:1010238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukodystrophy, sheep","secondary_identifiers":["OMIA:001130-9940"],"termid":"MONDO:1011006","xrefs":{"Monarch":{"xref_id":"1011006"}}}


id: PBO:0035732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromeric_chromatin_during_mitotic_G1_phase","termid":"PBO:0035732"}


id: PBO:0077508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 225B","termid":"PBO:0077508"}


id: PBO:0049898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERPUD family member 2","termid":"PBO:0049898"}


id: SO:0000893
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated at transcriptional or translational level.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_repressed","termid":"SO:0000126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced","secondary_identifiers":["http://en.wikipedia.org/wiki/Silenced"],"termid":"SO:0000893"}


id: PBO:0068299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 5 pseudogene 1","termid":"PBO:0068299"}


id: GO:0072221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric distal convoluted tubule over time, from its formation to the mature structure. The metanephric distal convoluted tubule is the first segment of the metanephric nephron lying just downstream from the loop of Henle, immediately after the macula densa. Among other functions, in humans it is responsible for the reabsorption of about 5% of filtered sodium via the thiazide-sensitive Na-Cl symporter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal convoluted tubule development","termid":"GO:0072025"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}


id: PBO:0030147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_level_during_vegetative_growth","termid":"PBO:0030147"}


id: MONDO:0019851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of primary ovarian failure that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary endocrine growth disease","termid":"MONDO:0015514"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare endocrine growth disease (obsolete MONDO:0019590)","termid":"MONDO:0019590"},{"relation_name":"is_a","term_name":"primary ovarian failure","termid":"MONDO:0005387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired primary ovarian failure","secondary_identifiers":["MEDGEN:1863413","SCTID:717954003","GARD:19293","Orphanet:95709","UMLS:C5925051"],"synonyms":[{"name":"acquired premature ovarian failure","type":"related"},{"name":"acquired primary ovarian failure","type":"exact"}],"termid":"MONDO:0019851","xrefs":{"Monarch":{"xref_id":"0019851"}}}


id: GO:0099551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the vesicular release and reception of neuropeptide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by neuropeptide","termid":"GO:0099540"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099551"}


id: PBO:0039709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A1","termid":"PBO:0039709"}


id: MONDO:0054666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 5","secondary_identifiers":["MEDGEN:1627972","DOID:0080497","UMLS:C4540141","OMIM:617690"],"synonyms":[{"name":"ODG5","type":"related"},{"name":"ovarian dysgenesis 5","type":"exact"}],"termid":"MONDO:0054666","xrefs":{"Monarch":{"xref_id":"0054666"}}}


id: FYPO:0004587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing urea as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell population growth on urea nitrogen source","synonyms":[{"name":"abolished urea utilization","type":"related"},{"name":"abolished vegetative cell population growth on urea nitrogen source","type":"exact"},{"name":"cell population growth on urea nitrogen source abolished","type":"exact"}],"termid":"FYPO:0004587"}


id: PR:Q9USH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pwi1 gene.","definition_xrefs":["UniProtKB:Q9USH5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWI domain-containing protein C825.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.05c","synonyms":[{"name":"Spom972h-pwi1","type":"exact"}],"termid":"PR:Q9USH5"}


id: MONDO:0030849
data:
  {"annotated_genes":["SJAG_01074"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86110],"is_not":false,"summary":null,"term":"MONDO:0030849"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01074":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with speech delay and axonal peripheral neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436813","GARD:18536","MEDGEN:1754849","OMIM:619099"],"synonyms":[{"name":"IDDSAPN","type":"exact"}],"termid":"MONDO:0030849","terms_by_termid":{"MONDO:0030849":null},"xrefs":{"Monarch":{"xref_id":"0030849"}}}


id: PR:000027567
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mei2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis protein mei2","synonyms":[{"name":"mei2","type":"exact"}],"termid":"PR:000027567"}


id: PBO:0057556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 671","termid":"PBO:0057556"}


id: FYPO:0006770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which kinetochore disassembly is abnormal during prophase of meiosis I. Normally, outer kinetochore components delocalize from the centromere during bouquet formation in meiotic prophase I.","definition_xrefs":["PMID:27611693","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal kinetochore disassembly during meiotic prophase I","synonyms":[{"name":"abnormal kinetochore disassembly during prophase I","type":"exact"},{"name":"abnormal kinetochore disassembly during prophase of meiosis I","type":"exact"},{"name":"defective kinetochore disassembly during meiotic prophase I","type":"exact"}],"termid":"FYPO:0006770"}


id: PBO:0030651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_nitrogen_starvation","termid":"PBO:0030651"}


id: PBO:0068264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 1, pancreatic","termid":"PBO:0068264"}


id: PBO:0036175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_eMTOC_assembly","termid":"PBO:0036175"}


id: GO:0045021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. DNA repair pathways that do not increase the mutation rate above spontaneous background levels, e.g. excision and recombination pathways.","definition_xrefs":["GOC:jl","PMID:11459974"],"gene_count":0,"genotype_count":0,"name":"obsolete error-free DNA repair (obsolete GO:0045021)","synonyms":[{"name":"error-free DNA repair","type":"exact"}],"termid":"GO:0045021"}


id: PBO:0113756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA splicing factor, FRG1 family, Frg1","termid":"PBO:0113756"}


id: SO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequences extending on either side of a specific region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanking_region","synonyms":[{"name":"flanking region","type":"exact"}],"termid":"SO:0000239"}


id: PBO:0051175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-64","termid":"PBO:0051175"}


id: PBO:0040068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPP21 antisense RNA 1","termid":"PBO:0040068"}


id: PBO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk9 (predicted)","termid":"PBO:0001067"}


id: GO:0052650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinol + NADP+ = all-trans-retinal + NADPH + H+.","definition_xrefs":["RHEA:25033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"all-trans-retinol dehydrogenase (NADP+) activity","secondary_identifiers":["Reactome:R-HSA-2465940","Reactome:R-HSA-5419165","EC:1.1.1.300","MetaCyc:RXN-10841","Reactome:R-HSA-5615668","Reactome:R-HSA-2464822","KEGG_REACTION:R08379","Reactome:R-HSA-2466861","Reactome:R-HSA-5623643","Reactome:R-HSA-74872","Reactome:R-HSA-2465921","Reactome:R-HSA-2464803"],"synonyms":[{"name":"NADP(H)-dependent retinol dehydrogenase/reductase activity","type":"related"},{"name":"NADP-retinol dehydrogenase activity","type":"exact"},{"name":"all-trans retinal reductase activity","type":"broad"},{"name":"all-trans-retinol dehydrogenase activity","type":"broad"},{"name":"retinol dehydrogenase [NADP+] activity","type":"related"},{"name":"retinol dehydrogenase activity","type":"broad"},{"name":"retinol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052650"}


id: PBO:0013004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion","termid":"PBO:0013004"}


id: GO:0031077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the post-embryonic phase whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye development","termid":"GO:0043010"},{"relation_name":"part_of","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic camera-type eye development","synonyms":[{"name":"post-embryonic camera-style eye development","type":"exact"}],"termid":"GO:0031077"}


id: PBO:0060728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit AB1","termid":"PBO:0060728"}


id: PBO:0004670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine) methyltransferase (predicted)","termid":"PBO:0004670"}


id: PBO:0047969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAS1 related extracellular matrix 2","termid":"PBO:0047969"}


id: GO:0003809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Gly; activates fibrinogen to fibrin and releases fibrinopeptide A and B.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thrombin activity (obsolete GO:0003809)","synonyms":[{"name":"E thrombin","type":"related"},{"name":"activated blood-coagulation factor II","type":"related"},{"name":"beta-thrombin","type":"related"},{"name":"blood-coagulation factor IIa","type":"related"},{"name":"factor IIa","type":"related"},{"name":"fibrinogenase activity","type":"related"},{"name":"gamma-thrombin","type":"related"},{"name":"thrombase activity","type":"related"},{"name":"thrombin activity","type":"exact"},{"name":"thrombin-C","type":"related"},{"name":"thrombofort","type":"related"},{"name":"topical","type":"related"},{"name":"tropostasin","type":"related"}],"termid":"GO:0003809"}


id: GO:0018304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-aspartato tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0286"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-aspartato tetrairon tetrasulfide (obsolete GO:0018304)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-aspartato tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018304"}


id: PR:O59722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fab1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 3-phosphate 5-kinase fab1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.01","synonyms":[{"name":"PIPkin-III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fab1","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphatidylinositol 3-phosphate 5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type III PIP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59722"}


id: GO:0044544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism initiates, promotes, or enhances the activation of plasminogen into plasmin in another organism via the action of a venom. This process includes cleavage at an internal Arg-Val site to form an N-terminal A-chain and C-terminal B-chain held together by a disulfide bond, and can include further proteolytic cleavage events to remove the preactivation peptide.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated fibrinolysis","termid":"GO:0044484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated plasminogen activation","synonyms":[{"name":"envenomation resulting in plasminogen activation in another organism","type":"exact"},{"name":"envenomation resulting in plasminogen activation in other organism","type":"exact"}],"termid":"GO:0044544"}


id: PBO:0062061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Y member 1","termid":"PBO:0062061"}


id: PBO:0044579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBI pseudogene 1","termid":"PBO:0044579"}


id: PBO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-target_is","termid":"PBO:0000016"}


id: GO:1900094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in determination of left/right symmetry.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry (obsolete GO:1900094)","synonyms":[{"name":"global transcription regulation from Pol II promoter of determination of left/right asymmetry","type":"related"},{"name":"global transcription regulation from Pol II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of determination of left/right asymmetry","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of global transcription from Pol II promoter of determination of left/right asymmetry","type":"related"},{"name":"regulation of global transcription from Pol II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of transcription from Pol II promoter of determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from Pol II promoter of determination of left/right symmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter of determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter of determination of left/right symmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global of determination of left/right asymmetry","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global of determination of left/right symmetry","type":"related"}],"termid":"GO:1900094"}


id: GO:0051427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for a hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hormone receptor binding","termid":"GO:0051427"}


id: GO:1990571
data:
  {"annotated_genes":["SJAG_00794","SJAG_03683","SJAG_01805","SJAG_02814","SJAG_02761","SJAG_03540","SJAG_02624","SJAG_01613","SJAG_04076"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94121,95636,99543,100704,102755,109465,116253,118479,118994],"is_not":false,"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The process by which centromeres/kinetochores attach to and migrate along microtubules to become localized to clusters at the spindle pole body during a meiotic prometaphase I.","definition_xrefs":["PMID:9009280","PMID:10366596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"centromere clustering","termid":"GO:0098653"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0051179","GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic centromere clustering","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere clustering during meiosis","type":"exact"},{"name":"homologous chromosome movement towards spindle pole in meiosis I prometaphase","type":"exact"}],"termid":"GO:1990571","terms_by_termid":{"GO:1990571":null}}


id: PR:P87141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulatory-associated protein of mTOR that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein mip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.11","secondary_identifiers":["UniProtKB:P87141"],"synonyms":[{"name":"Spom972h-RPTOR","type":"exact"}],"termid":"PR:P87141"}


id: PBO:0064346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin A4","termid":"PBO:0064346"}


id: PBO:0039141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AJUBA divergent transcript","termid":"PBO:0039141"}


id: GO:0016043
data:
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id: PBO:0028339
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id: MONDO:1012200
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id: PBO:0074791
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id: PBO:0017711
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  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF7","termid":"PBO:0017711"}


id: PBO:0046821
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA core complex associated protein 100","termid":"PBO:0046821"}


id: MONDO:0017918
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"White matter hypoplasia-corpus callosum agenesis-intellectual disability syndrome is a very rare neurological condition. The few patients described in the medical literature were characterized by brain anomalies; an unusual face with broad nasal root, wide spaced eyes (hypertelorism) and a very small chin (micrognathia); failure to thrive; severe intellectual disability ;and lack of muscle tone (hypotonia). Exams of the brain showed a poor development (hypoplasia) of the pale part of the brain known as white matter, and an absent or abnormal corpus callosum (nerve fibers joining the two hemispheres of the brain). Only a few cases have being described. The cause is unknown but may be related to a disorder of axonal development. The described cases seem to be inherited in an autosomal recessive or X-linked way. Corpus callosum agenesis is one of the more frequent congenital malformations. It can be either asymptomatic or associated with intellectual disability, epilepsy, or psychiatric syndromes. It can be part of several genetic syndromes, such as Aicardi syndrome, Andermann syndrome and Apert syndrome, trisomies 13, 18 ; or result from metabolic causes; drugs (cocaine); or viral infection (influenza). Many patients with corpus callosum anomalies have other brain anomalies, including white matter hypoplasia. There is no information on specific treatment for this condition.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"white matter hypoplasia-corpus callosum agenesis-intellectual disability syndrome","secondary_identifiers":["UMLS:C2931292","MESH:C536701","GARD:12488","MEDGEN:419038","Orphanet:3207"],"synonyms":[{"name":"Curatolo Cilio Pessagno syndrome","type":"related"},{"name":"Curatolo-Cilio-Pessagno syndrome","type":"exact"},{"name":"familial white matter hypoplasia, agenesis of the corpus callosum, intellectual disability and growth deficiency","type":"related"}],"termid":"MONDO:0017918","xrefs":{"Monarch":{"xref_id":"0017918"}}}


id: PBO:0066238
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 45","termid":"PBO:0066238"}


id: MONDO:0100137
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id: FYPO:0003165
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id: MONDO:0030919
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id: PBO:0001047
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Tsr1 (predicted)","termid":"PBO:0001047"}


id: FYPO:0005444
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is initially slower than normal, and remains slow for several generations, after which the population resumes growing at a normal or near-normal rate.","definition_xrefs":["PMID:17429064","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"slow vegetative cell population growth","termid":"FYPO:0001234"},{"relation_name":"is_a","term_name":"slow vegetative cell population growth","termid":"FYPO:0001234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0002057"},{"rel_name":"has_part","termid":"FYPO:0000139"},{"rel_name":"has_part","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"slow vegetative cell population growth followed by return to normal growth rate","synonyms":[{"name":"decreased cell population proliferation followed by return to normal proliferation","type":"related"},{"name":"decreased cell proliferation followed by return to normal proliferation","type":"related"},{"name":"reduced cell proliferation followed by return to normal proliferation","type":"related"},{"name":"slow cell population growth followed by return to normal growth rate during vegetative growth","type":"exact"}],"termid":"FYPO:0005444"}


id: GO:0061070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the female urethra over time from its initial formation to the mature structure. The female urethra is a renal system organ that carries urine from the bladder to outside the body, exiting above the vaginal opening.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethra development","termid":"GO:0061068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female urethra development","termid":"GO:0061070"}


id: MONDO:0006225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mantle cell lymphoma that affects the stomach. It may arise as a solitary mass or it may be a component of multifocal lymphomatous polyposis of the gastrointestinal tract. It usually has an aggressive clinical course.","definition_xrefs":["NCIT:C27440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"mantle cell lymphoma","termid":"MONDO:0018876"},{"relation_name":"is_a","term_name":"gastric non-hodgkin lymphoma","termid":"MONDO:0042493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"gastric mantle cell lymphoma","secondary_identifiers":["UMLS:C1333780","MEDGEN:234300","EFO:1000272"],"synonyms":[{"name":"gastric mantle cell lymphoma","type":"exact"},{"name":"mantle cell lymphoma of stomach","type":"exact"},{"name":"mantle cell lymphoma of the stomach","type":"exact"},{"name":"stomach mantle cell lymphoma","type":"exact"}],"termid":"MONDO:0006225","xrefs":{"Monarch":{"xref_id":"0006225"}}}


id: MOD:01644
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-phenylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine removal","termid":"MOD:01644"}


id: GO:0102279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an 11-cis retinol-[cellular-retinol-binding-protein] + a phosphatidylcholine = a cellular-retinol-binding protein + an 11-cis-retinyl ester + a 1-lysophosphatidylcholine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lecithin:11-cis retinol acyltransferase activity (obsolete GO:0102279)","termid":"GO:0102279"}


id: MONDO:0850345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pleomorphic carcinoma that is characterized by the presence of malignant glandular or squamous cells associated with malignant giant and spindle cells and that is located in the lung.","definition_xrefs":["DOID:0080899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleomorphic carcinoma","termid":"MONDO:0003573"},{"relation_name":"is_a","term_name":"lung sarcomatoid carcinoma","termid":"MONDO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung pleomorphic carcinoma","secondary_identifiers":["UMLS:C1711397","MEDGEN:314017","NCIT:C45542"],"termid":"MONDO:0850345","xrefs":{"Monarch":{"xref_id":"0850345"}}}


id: GO:0042879
data:
  {"annotated_genes":["SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015128"}]},"cv_name":"molecular_function","definition":"Enables the transfer of aldonate from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","GOC:jl","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"aldonate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042879","terms_by_termid":{"GO:0015128":null}}


id: PBO:0082195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alkaline dihydroceramidase, involved in sphingolipid metabolism; preferentially hydrolyzes dihydroceramide to a free fatty acid and dihydrosphingosine; has a minor reverse activity; YDC1 has a paralog, YPC1, that arose from the whole genome duplication","termid":"PBO:0082195"}


id: GO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell activation involved in immune response","synonyms":[{"name":"mast cell activation during immune response","type":"related"}],"termid":"GO:0002279"}


id: GO:0016643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.4.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016643"}


id: PBO:0066060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAPGEF4 antisense RNA 1","termid":"PBO:0066060"}


id: PBO:0049848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme binding protein 1","termid":"PBO:0049848"}


id: PBO:0051838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunity related GTPase Q","termid":"PBO:0051838"}


id: PBO:0078003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 3","termid":"PBO:0078003"}


id: MONDO:0008835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma, short stature, and elevated IgA","secondary_identifiers":["OMIM:208600","MEDGEN:395313","MESH:C565934","UMLS:C1859647"],"synonyms":[{"name":"asthma, short stature, and elevated IgA","type":"exact"}],"termid":"MONDO:0008835","xrefs":{"Monarch":{"xref_id":"0008835"}}}


id: PBO:0080204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vezatin, adherens junctions transmembrane protein","termid":"PBO:0080204"}


id: MONDO:0008384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A particular variant of polyarthritis associated with early manifestations of palindromic rheumatism, radiologic subchondral bone cysts, and subcutaneous rheumatoid nodules.","definition_xrefs":["PMID:17041479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyarticular arthritis","termid":"MONDO:0024280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid nodulosis","secondary_identifiers":["OMIM:180350","SCTID:402427003","SCTID:402426007","MEDGEN:19781","MESH:D012218","UMLS:C0035450"],"synonyms":[{"name":"accelerated rheumatoid nodulosis","type":"exact"},{"name":"rheumatoid nodulosis","type":"exact"}],"termid":"MONDO:0008384","xrefs":{"Monarch":{"xref_id":"0008384"}}}


id: GO:0062167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex composed of six subunits of each of the three homologous polypeptide chains C1QA, C1QB, and C1QB. It is a subunit of the complement C1 complex. In addition to complement activation, C1q appears to have roles in homeostasis and cellular development, superoxide (O2-) production by neutrophils, blood coagulation and neurological synapse pruning.","definition_xrefs":["PMID:29449492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"complement component C1q complex","synonyms":[{"name":"C1q","type":"exact"},{"name":"Complement 1q","type":"exact"}],"termid":"GO:0062167"}


id: GO:1900538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glucose homeostasis.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glucose homeostasis (obsolete GO:1900538)","synonyms":[{"name":"activation of glucose homeostasis","type":"narrow"},{"name":"positive regulation of glucose homeostasis","type":"exact"},{"name":"up regulation of glucose homeostasis","type":"exact"},{"name":"up-regulation of glucose homeostasis","type":"exact"},{"name":"upregulation of glucose homeostasis","type":"exact"}],"termid":"GO:1900538"}


id: PBO:0087282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) receptor alpha subunit; contain GTPase domains; involved in SRP-dependent protein targeting; interacts with the beta subunit, Srp102p","termid":"PBO:0087282"}


id: PBO:0057957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3680-1","termid":"PBO:0057957"}


id: MOD:00371
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-aspartic acid residues, three L-glutamic acid residues, an L-histidine residue, and a one-calcium, four-iron, four-oxygen cluster to bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide.","definition_xrefs":["PubMed:14764885","RESID:AA0366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese containing modified residue","termid":"MOD:00740"},{"relation_name":"is_a","term_name":"calcium containing modified residue","termid":"MOD:01482"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide","synonyms":[{"name":"4Mn-Ca-4O cluster","type":"exact"},{"name":"bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide","type":"exact"},{"name":"mu3-1:2:3kappaO-oxido-mu3-1:3:4kappaO-oxido-mu3-2:3:4kappaO-oxido-mu4-1:2:4:5kappaO-oxido-N1'-histidino-O5-glutamato 2-manganese-O5,O5-glutamato 3-manganese-O4-aspartato 4-manganese-O4-aspartato-O5-glutamato 5-manganese","type":"exact"},{"name":"photosystem II catalytic cluster","type":"exact"}],"termid":"MOD:00371"}


id: MONDO:0850014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twin-reversed arterial perfusion sequence","secondary_identifiers":["Orphanet:617297","GARD:22446","MEDGEN:1842726","UMLS:C5575500"],"termid":"MONDO:0850014","xrefs":{"Monarch":{"xref_id":"0850014"}}}


id: RO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c has-biological-role r iff c has-role r and r is a biological role (CHEBI:24432)","direct_ancestors":[{"relation_name":"is_a","term_name":"has_role","termid":"RO:0000087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_biological_role","termid":"RO:0002260"}


id: MONDO:0019194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localised lipodystrophies are characterized by loss of subcutaneous tissue from small regions of the body.","definition_xrefs":["Orphanet:79088"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acquired lipodystrophy","termid":"MONDO:0020089"},{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"localized lipodystrophy","secondary_identifiers":["MEDGEN:1385527","NCIT:C131814","UMLS:C4329999","GARD:5867"],"synonyms":[{"name":"centrifugal lipodystrophy (subtype)","type":"related"},{"name":"drug-induced localised lipodystrophy (subtype)","type":"related"},{"name":"drug-induced localized lipodystrophy (subtype)","type":"related"},{"name":"focal lipodystrophy","type":"exact"},{"name":"idiopathic localised lipodystrophy (subtype)","type":"related"},{"name":"idiopathic localized lipodystrophy (subtype)","type":"related"},{"name":"panniculitis and localised lipodystrophy (subtype)","type":"related"},{"name":"panniculitis and localized lipodystrophy (subtype)","type":"related"},{"name":"pressure-induced localised lipoatrophy (subtype)","type":"related"},{"name":"pressure-induced localized lipoatrophy (subtype)","type":"related"}],"termid":"MONDO:0019194","xrefs":{"Monarch":{"xref_id":"0019194"}}}


id: PBO:0063479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDLIM1 interacting kinase 1 like","termid":"PBO:0063479"}


id: PBO:0057078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181a-1","termid":"PBO:0057078"}


id: PBO:0067276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 354, pseudogene","termid":"PBO:0067276"}


id: GO:2000439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular extravasation","termid":"GO:0002693"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of monocyte extravasation","termid":"GO:2000437"},{"relation_name":"positively_regulates","term_name":"monocyte extravasation","termid":"GO:0035696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte extravasation","termid":"GO:2000439"}


id: MONDO:1010858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lysosomal storage disease that occurs in emu.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disease, emu","secondary_identifiers":["OMIA:000616-8790"],"termid":"MONDO:1010858","xrefs":{"Monarch":{"xref_id":"1010858"}}}


id: FYPO:0004698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of heme binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased heme binding","synonyms":[{"name":"decreased haem binding","type":"exact"},{"name":"reduced heme binding","type":"exact"}],"termid":"FYPO:0004698"}


id: GO:0006712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mineralocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"mineralocorticoid metabolic process","termid":"GO:0008212"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"mineralocorticoid catabolic process","synonyms":[{"name":"mineralocorticoid breakdown","type":"exact"},{"name":"mineralocorticoid catabolism","type":"exact"},{"name":"mineralocorticoid degradation","type":"exact"}],"termid":"GO:0006712"}


id: PBO:0067761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 61","termid":"PBO:0067761"}


id: GO:0035337
data:
  {"annotated_genes":["SJAG_03471","SJAG_04007","SJAG_03909"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[77594,79174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty-acyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fatty acyl CoA metabolic process","type":"exact"},{"name":"fatty-acyl-CoA metabolism","type":"exact"}],"termid":"GO:0035337","terms_by_termid":{"GO:0035336":null,"GO:0035338":null}}


id: GO:0090166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of a Golgi apparatus that contributes to Golgi inheritance.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"},{"relation_name":"part_of","term_name":"Golgi inheritance","termid":"GO:0048313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi disassembly","synonyms":[{"name":"Golgi apparatus disassembly","type":"exact"}],"termid":"GO:0090166"}


id: PBO:0070600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 67","termid":"PBO:0070600"}


id: PBO:0048717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLRX5 pseudogene 3","termid":"PBO:0048717"}


id: PBO:0059685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 51","termid":"PBO:0059685"}


id: GO:0047506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dAMP + ATP = dADP + ADP.","definition_xrefs":["RHEA:23100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside phosphate kinase activity, ATP as phosphate donor","termid":"GO:0047507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"dAMP kinase activity","secondary_identifiers":["EC:2.7.4.11","MetaCyc:DEOXYADENYLATE-KINASE-RXN"],"synonyms":[{"name":"(deoxy)adenylate kinase activity","type":"exact"},{"name":"ATP:(d)AMP phosphotransferase activity","type":"related"}],"termid":"GO:0047506"}


id: PBO:0047872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(3)(p24.2)","termid":"PBO:0047872"}


id: PBO:0087594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1; involved in the cellular stress response; similar to S. pombe Tti2p; may interact with Rsm23p; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0087594"}


id: GO:0036106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II peroxisomal membrane targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome membrane in a PEX19-independent manner.","definition_xrefs":["GOC:pm","PMID:14709540","PMID:17020786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome membrane targeting sequence binding","termid":"GO:0033328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005048"],"is_obsolete":false,"name":"peroxisome membrane class-2 targeting sequence binding","synonyms":[{"name":"PEX19-independent mPTS binding","type":"related"},{"name":"class 2 mPTS binding","type":"exact"}],"termid":"GO:0036106"}


id: GO:0046333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving octopamine, 1-(p-hydroxyphenyl)-2-aminoethanol. The D enantiomer is about one-tenth as active as norepinephrine and is found in the salivary glands of Octopus and Eledone species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"ethanolamine-containing compound metabolic process","termid":"GO:0042439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"octopamine metabolic process","synonyms":[{"name":"octopamine metabolism","type":"exact"}],"termid":"GO:0046333"}


id: MONDO:0010875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pachydermodactyly, familial","secondary_identifiers":["OMIM:600356","MEDGEN:324974","MESH:C563947","UMLS:C1838218"],"synonyms":[{"name":"pachydermodactyly, familial","type":"exact"}],"termid":"MONDO:0010875","xrefs":{"Monarch":{"xref_id":"0010875"}}}


id: GO:0046602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the separation of duplicated centrosome components at the beginning of mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"mitotic centrosome separation","termid":"GO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic centrosome separation","termid":"GO:0046602"}


id: PBO:0078350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 16-1","termid":"PBO:0078350"}


id: GO:1904311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gold(3+) stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:16206274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gold(3+)","termid":"GO:1904311"}


id: PBO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp2","termid":"PBO:0001143"}


id: PR:Q9UUH6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC630.06c gene.","definition_xrefs":["UniProtKB:Q9UUH6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized nucleolar protein C630.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.06c","synonyms":[{"name":"Spom972h-SPAC630.06c","type":"exact"}],"termid":"PR:Q9UUH6"}


id: GO:1903004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K63-linked deubiquitination.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie","PMID:22970133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"regulates","term_name":"protein K63-linked deubiquitination","termid":"GO:0070536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein K63-linked deubiquitination","termid":"GO:1903004"}


id: GO:0021851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the dorsal region of the lateral ganglionic eminence. These cells give rise to embryonic interneuron precursors that will migrate tangentially to the olfactory bulb.","definition_xrefs":["PMID:12626695","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division in subpallium","termid":"GO:0021848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in dorsal lateral ganglionic eminence","termid":"GO:0021851"}


id: MONDO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decreased vision that results from abnormal visual development.","definition_xrefs":["NCIT:C118764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder","termid":"MONDO:0021084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amblyopia","secondary_identifiers":["CSP:1114-9655","MESH:D000550","SCTID:387742006","MEDGEN:8009","ICD9:368.00","DOID:10376","HP:0000646","UMLS:C0002418"],"synonyms":[{"name":"amblyopia","type":"exact"},{"name":"amblyopia (disease)","type":"exact"},{"name":"lazy eye","type":"related"}],"termid":"MONDO:0001020","xrefs":{"Monarch":{"xref_id":"0001020"}}}


id: PBO:0003596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin binding repeats","termid":"PBO:0003596"}


id: PBO:0052233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 1","termid":"PBO:0052233"}


id: PBO:0067901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 203","termid":"PBO:0067901"}


id: MONDO:0008983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal instability with tissue-specific radiosensitivity","secondary_identifiers":["UMLS:C1859091","MEDGEN:347797","MESH:C565848","OMIM:215510"],"synonyms":[{"name":"chromosomal instability with tissue-specific radiosensitivity","type":"exact"}],"termid":"MONDO:0008983","xrefs":{"Monarch":{"xref_id":"0008983"}}}


id: PBO:0073048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 6","termid":"PBO:0073048"}


id: GO:0038159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a the C-X-C chemokine type 4 receptor on the surface of a cell binding to one of it's physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"C-X-C chemokine receptor CXCR4 signaling pathway","synonyms":[{"name":"CXCR4 signaling pathway","type":"exact"}],"termid":"GO:0038159"}


id: MOD:00754
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a bromine atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brominated residue","synonyms":[{"name":"BrRes","type":"exact"}],"termid":"MOD:00754"}


id: GO:0030829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cGMP catabolic process (obsolete GO:0030829)","synonyms":[{"name":"regulation of cGMP breakdown","type":"exact"},{"name":"regulation of cGMP catabolism","type":"exact"},{"name":"regulation of cGMP degradation","type":"exact"}],"termid":"GO:0030829"}


id: PBO:0063611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFDN1 pseudogene 2","termid":"PBO:0063611"}


id: MONDO:0004938
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007079"}]},"cv_name":"mondo","definition":"The psychological or physiological need to take a substance in order to experience its effects or to avoid the effects of its absence.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance-related disorder","termid":"MONDO:0002494"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"is_obsolete":false,"name":"substance dependence","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:2403008","UMLS:C0038580","DOID:9973","MEDGEN:20989","NCIT:C35458","ICD9:304.60"],"synonyms":[{"name":"dependence","type":"exact"}],"termid":"MONDO:0004938","terms_by_termid":{"MONDO:0007079":null},"xrefs":{"Monarch":{"xref_id":"0004938"}}}


id: PATO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located further from a more centrally located entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal to","synonyms":[{"name":"distal","type":"exact"}],"termid":"PATO:0001234"}


id: PBO:0086565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR320W is not an essential gene","termid":"PBO:0086565"}


id: GO:0003988
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA.","definition_xrefs":["RHEA:21564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"acetyl-CoA C-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-77271","Reactome:R-HSA-77329","Reactome:R-HSA-77309","Reactome:R-HSA-77304","Reactome:R-HSA-77340","MetaCyc:KETOACYLCOATHIOL-RXN","Reactome:R-HSA-8874745","UM-BBD_reactionID:r1051","Reactome:R-HSA-390250","Reactome:R-HSA-77321","EC:2.3.1.16"],"synonyms":[{"name":"2-keto-acyl thiolase activity","type":"exact"},{"name":"3-ketoacyl coenzyme A thiolase activity","type":"exact"},{"name":"3-ketoacyl-CoA thiolase activity","type":"exact"},{"name":"3-ketothiolase activity","type":"exact"},{"name":"acetoacetyl-CoA beta-ketothiolase activity","type":"exact"},{"name":"acetyl-CoA acyltransferase activity","type":"exact"},{"name":"beta-ketoacyl coenzyme A thiolase activity","type":"exact"},{"name":"beta-ketothiolase activity","type":"exact"}],"termid":"GO:0003988","terms_by_termid":{"GO:0003985":null}}


id: GO:0015770
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of sucrose into, out of or within a cell, or between cells by means of some agent such as a transporter or pore. Sucrose is the disaccharide fructofuranosyl-glucopyranoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sucrose transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015770","terms_by_termid":{"GO:0106082":null}}


id: PBO:0072101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 32","termid":"PBO:0072101"}


id: PBO:0002764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiE family methyltransferase (predicted)","termid":"PBO:0002764"}


id: PBO:0049477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.1 linker histone, cluster member","termid":"PBO:0049477"}


id: PBO:0071439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 45","termid":"PBO:0071439"}


id: MONDO:0014496
data:
  {"annotated_genes":["SJAG_05305"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87024],"is_not":false,"summary":null,"term":"MONDO:0014496"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the UQCC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4015253","MEDGEN:863690","DOID:0080118","GARD:16060","OMIM:616111"],"synonyms":[{"name":"MC3DN9","type":"related"},{"name":"UQCC3 mitochondrial complex III deficiency","type":"exact"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 9","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in UQCC3","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 9","type":"related"}],"termid":"MONDO:0014496","terms_by_termid":{"MONDO:0014496":null},"xrefs":{"Monarch":{"xref_id":"0014496"}}}


id: PBO:0055644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3083","termid":"PBO:0055644"}


id: PBO:0062307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 4 pseudogene","termid":"PBO:0062307"}


id: GO:0019961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interferon, a protein produced by the immune systems of many animals in response to a challenge by a foreign agent.","definition_xrefs":["Wikipedia:Interferon","PMID:9607096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interferon binding","synonyms":[{"name":"IFN binding","type":"exact"}],"termid":"GO:0019961"}


