# terms

id: PBO:0054793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2207","termid":"PBO:0054793"}


id: MONDO:0017139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oromandibular-limb hypogenesis syndromes (OLHS) are a group of dysmorphic complexes (including Charlie M syndrome, Hanhart syndrome and glossopalatine ankylosis) characterized by the association of severe asymmetric limb defects (primarily involving distal segments) and abnormalities of the oral cavity and mandible (hypoglossia, aglossia, micrognathia, glossopalatine ankylosis, cleft palate, and gingival anomalies).","definition_xrefs":["Orphanet:2749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"oromandibular-limb anomalies syndrome","termid":"MONDO:0015498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"oromandibular-limb hypogenesis syndrome","secondary_identifiers":["UMLS:C5679764","MEDGEN:1843329","GARD:4116","icd11.foundation:1665391511"],"synonyms":[{"name":"Oroacral syndrome","type":"exact"},{"name":"oro-mandibular-limb hypogenesis syndrome","type":"related"}],"termid":"MONDO:0017139","xrefs":{"Monarch":{"xref_id":"0017139"}}}


id: MONDO:1011065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal hypoplasia, bilateral that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia, bilateral, non-human animal","termid":"MONDO:1010266"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal hypoplasia, bilateral, dog","secondary_identifiers":["OMIA:000858-9615"],"termid":"MONDO:1011065","xrefs":{"Monarch":{"xref_id":"1011065"}}}


id: GO:0048707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during instar larval or pupal development, by which anatomical structures are generated and organized.","definition_xrefs":["GOC:mtg_sensu","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval or pupal development","termid":"GO:0002165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}


id: GO:1901920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any peptidyl-tyrosine dephosphorylation that is involved in activation of protein kinase activity.","definition_xrefs":["GOC:TermGenie","PMID:1756737"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine dephosphorylation involved in activation of protein kinase activity (obsolete GO:1901920)","synonyms":[{"name":"peptidyl-tyrosine dephosphorylation involved in protein kinase activation","type":"related"}],"termid":"GO:1901920"}


id: PBO:0047577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGFR1 oncogene partner 2","termid":"PBO:0047577"}


id: GO:2000723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905064"},{"relation_name":"is_a","term_name":"negative regulation of cardiocyte differentiation","termid":"GO:1905208"},{"relation_name":"is_a","term_name":"regulation of cardiac vascular smooth muscle cell differentiation","termid":"GO:2000722"},{"relation_name":"negatively_regulates","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac vascular smooth muscle cell differentiation","synonyms":[{"name":"negative regulation of heart vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000723"}


id: PBO:0083895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier; forms a stable association with Nup82p, Gle2p and two other FG-nucleoporins (Nsp1p and Nup159p); NUP116 has a paralog, NUP100, that arose from the whole genome duplication","termid":"PBO:0083895"}


id: PATO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000234 visual (obsolete PATO:0000234)","termid":"PATO:0000234"}


id: MONDO:0023011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson-Mikity syndrome","secondary_identifiers":["UMLS:C0270171","SCTID:51577008","icd11.foundation:846899990","GARD:10495","MEDGEN:78714"],"synonyms":[{"name":"Pulmonary dysmaturity","type":"related"},{"name":"Pulmonary dysmaturity syndrome","type":"related"},{"name":"Wilson-Mikity syndrome","type":"exact"},{"name":"pulmonary dysmaturity","type":"related"},{"name":"wilson-mikity syndrome","type":"exact"}],"termid":"MONDO:0023011","xrefs":{"Monarch":{"xref_id":"0023011"}}}


id: FYPO:0001505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular phosphatidylserine level","synonyms":[{"name":"increased cellular PS level","type":"exact"},{"name":"increased cellular phosphatidyl-L-serine level","type":"exact"},{"name":"increased cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylserine level during vegetative growth","type":"exact"},{"name":"increased phosphatidylserine accumulation","type":"related"}],"termid":"FYPO:0001505"}


id: PBO:0058581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715a","termid":"PBO:0058581"}


id: PATO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000121 relative height (obsolete PATO:0000121)","termid":"PATO:0000121"}


id: PBO:0041370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4orf46 pseudogene 2","termid":"PBO:0041370"}


id: GO:1901310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sterol regulatory element binding protein cleavage.","definition_xrefs":["PMID:15899885","PMID:16525117","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sterol regulatory element binding protein cleavage (obsolete GO:1901310)","synonyms":[{"name":"activation of SREBP cleavage","type":"exact"},{"name":"activation of sterol regulatory element binding protein cleavage","type":"narrow"},{"name":"positive regulation of SREBP cleavage","type":"exact"},{"name":"up regulation of SREBP cleavage","type":"exact"},{"name":"up regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"up-regulation of SREBP cleavage","type":"exact"},{"name":"up-regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"upregulation of SREBP cleavage","type":"exact"},{"name":"upregulation of sterol regulatory element binding protein cleavage","type":"exact"}],"termid":"GO:1901310"}


id: MONDO:0018765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cryptogenic multifocal ulcerous stenosing enteritis","secondary_identifiers":["MEDGEN:927932","UMLS:C4302263","SCTID:722849002","Orphanet:468635","GARD:21945","icd11.foundation:1401898155"],"synonyms":[{"name":"CMUSE","type":"exact"}],"termid":"MONDO:0018765","xrefs":{"Monarch":{"xref_id":"0018765"}}}


id: MONDO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Caroli disease (obsolete MONDO:0000506)","termid":"MONDO:0000506","xrefs":{"Monarch":{"xref_id":"0000506"}}}


id: GO:0007574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Process associated with continued cell division (budding) by the mother cell. Age is often measured by counting the number of bud scars on the cell.","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell aging (sensu Saccharomyces) (obsolete GO:0007574)","synonyms":[{"name":"cell aging (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007574"}


id: MONDO:0021143
data:
  {"annotated_genes":["SJAG_02855","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[86209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[85790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[85367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02855":null,"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"melanocytic neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D018326","NCIT:C7058","SCTID:399956005","MEDGEN:224910","UMLS:C1302746"],"synonyms":[{"name":"melanocytic neoplasm","type":"exact"},{"name":"melanomas and nevi","type":"related"}],"termid":"MONDO:0021143","terms_by_termid":{"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0021143"}}}


id: GO:0098884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the internalization of a neurotransmitter receptor from the postsynaptic membrane endocytic zone into an endocytic vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"neurotransmitter receptor internalization","termid":"GO:0099590"},{"relation_name":"is_a","term_name":"postsynaptic endocytosis","termid":"GO:0140239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"postsynaptic neurotransmitter receptor internalization","synonyms":[{"name":"postsynaptic neurotransmitter receptor endocytosis","type":"exact"}],"termid":"GO:0098884"}


id: FYPO:0006045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid biorientation begins later than normal.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid biorientation","termid":"FYPO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000631","FYPO:0000337","FYPO:0000641"],"is_obsolete":false,"name":"delayed onset of mitotic sister chromatid biorientation","synonyms":[{"name":"delayed mitotic sister chromatid biorientation","type":"exact"},{"name":"delayed onset of mitotic sister chromatid biorientation during vegetative growth","type":"exact"},{"name":"delayed onset of sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"mitotic sister chromatid biorientation delayed","type":"exact"}],"termid":"FYPO:0006045"}


id: PBO:0003676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, Atf-CREB family Atf1","termid":"PBO:0003676"}


id: MONDO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor arising in the central nervous system. It is characterized by the presence of primitive, large malignant germ cells and lymphocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"germinoma","secondary_identifiers":["ICDO:9064/3","NCIT:C3753","HP:0100620","MEDGEN:64626","DOID:3304","MESH:D018237","ONCOTREE:GMN","UMLS:C0206660"],"synonyms":[{"name":"germinoma","type":"exact"},{"name":"germinoma (disease)","type":"exact"}],"termid":"MONDO:0002598","xrefs":{"Monarch":{"xref_id":"0002598"}}}


id: GO:0080184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as the result of a phenylpropanoid stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism. A phenylpropanoid is any of secondary metabolites with structures based on a phenylpropane skeleton. The class includes phenylpropanoid esters, flavonoids, anthocyanins, coumarins and many small phenolic molecules. Phenylpropanoids are also precursors of lignin.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phenylpropanoid","termid":"GO:0080184"}


id: GO:0010176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homogentisate + phytyl diphosphate + H+ = 2-methyl-6-phytyl-1,4-benzoquinone + CO2 + diphosphate. 2-methyl-6-phytyl-1,4-benzoquinone is also known as 2-methyl-6-phytylplastoquinol.","definition_xrefs":["PMID:14512521","MetaCyc:RXN-2541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"homogentisate phytyltransferase activity","secondary_identifiers":["EC:2.5.1.115","KEGG_REACTION:R07500","RHEA:37975"],"synonyms":[{"name":"HPT activity","type":"exact"}],"termid":"GO:0010176"}


id: GO:0031078
data:
  {"annotated_genes":["SJAG_00581","SJAG_03844"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64108,109795],"is_not":false,"summary":null,"term":"GO:0031078"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 14) + H2O = histone H3 L-lysine (position 14) + acetate. This reaction represents the removal of an acetyl group from lysine at position 14 of the histone H3 protein.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0019213","GO:0016787","GO:0003824","GO:0016810","GO:0033558","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H3K14 deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K14 deacetylase activity","type":"exact"},{"name":"histone H3K14 deacetylase activity","type":"broad"},{"name":"histone deacetylase activity (H3-K14 specific)","type":"exact"}],"termid":"GO:0031078","terms_by_termid":{"GO:0031078":null}}


id: PBO:0074432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 32","termid":"PBO:0074432"}


id: GO:0099562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which maintains the organization and the arrangement of proteins in the presynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of postsynaptic specialization structure","termid":"GO:0098880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of postsynaptic density structure","termid":"GO:0099562"}


id: PBO:0017096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Nnk1 (predicted)","termid":"PBO:0017096"}


id: PATO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000138 absolute orientation (obsolete PATO:0000138)","termid":"PATO:0000138"}


id: GO:1905372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ceramide phosphoethanolamine.","definition_xrefs":["GOC:hjd","PMID:25667419","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"ceramide phosphoethanolamine metabolic process","termid":"GO:1905371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ceramide phosphoethanolamine catabolic process","synonyms":[{"name":"ceramide phosphoethanolamine breakdown","type":"exact"},{"name":"ceramide phosphoethanolamine catabolism","type":"exact"},{"name":"ceramide phosphoethanolamine degradation","type":"exact"}],"termid":"GO:1905372"}


id: MONDO:0018508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of small intestine carcinoma that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare carcinoma of small intestine (obsolete MONDO:0018508)","secondary_identifiers":["Orphanet:423957"],"synonyms":[{"name":"rare carcinoma of small bowel","type":"exact"},{"name":"rare small intestine carcinoma","type":"exact"}],"termid":"MONDO:0018508","xrefs":{"Monarch":{"xref_id":"0018508"}}}


id: MOD:00048
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.","definition_xrefs":["PubMed:1725475","OMSSA:8","PubMed:10226369","RESID:AA0039","Unimod:21#Y","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 243.02-243.03 Da","termid":"MOD:00774"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"O-phosphorylated residue","termid":"MOD:01455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O4'-phospho-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-phosphonooxyphenyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(4-hydroxyphenyl)propanoic acid 4'-phosphate","type":"exact"},{"name":"2-azanyl-3-(4-phosphonooxyphenyl)propanoic acid","type":"exact"},{"name":"MOD_RES Phosphotyrosine","type":"exact"},{"name":"O4'-phospho-L-tyrosine","type":"exact"},{"name":"O4'-phosphorylated L-tyrosine","type":"exact"},{"name":"O4-phosphotyrosine","type":"exact"},{"name":"OPTyr","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phospho Tyrosinyl","type":"exact"},{"name":"Phosphorylation","type":"related"},{"name":"phosphorylationy","type":"exact"},{"name":"tyrosine phosphate","type":"exact"}],"termid":"MOD:00048"}


id: PBO:0057269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR493 cluster host gene","termid":"PBO:0057269"}


id: MOD:01069
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a 2,4-dinitrophenyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,4-dinitrophenyl modified residue","synonyms":[{"name":"Dnp","type":"exact"}],"termid":"MOD:01069"}


id: PBO:0082362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-specific protein required for autophagosome formation; forms a complex with Atg17p and Atg29p that localizes other proteins to the pre-autophagosomal structure; constitutively phosphorylated, and phosphorylation of residue S174 is required for function; high-copy suppressor of CIK1 deletion","termid":"PBO:0082362"}


id: GO:0008285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell population proliferation","synonyms":[{"name":"down regulation of cell proliferation","type":"exact"},{"name":"down-regulation of cell proliferation","type":"exact"},{"name":"downregulation of cell proliferation","type":"exact"},{"name":"inhibition of cell proliferation","type":"narrow"},{"name":"negative regulation of cell proliferation","type":"related"}],"termid":"GO:0008285"}


id: FYPO:0002958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the Mei2 nuclear dot is abnormal. The Mei2 nuclear dot is a nuclear body that contains Mei2, other proteins, and meiRNA, and forms during meiotic prophase in a fixed position in the horsetail nucleus.","definition_xrefs":["PomBase:mah","GO:0033620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during meiotic prophase I","termid":"FYPO:0006183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to Mei2 nuclear dot","synonyms":[{"name":"abnormal protein localisation to Mei2 nuclear dot","type":"exact"}],"termid":"FYPO:0002958"}


id: PBO:0058240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4527 host gene","termid":"PBO:0058240"}


id: PBO:0077239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 1","termid":"PBO:0077239"}


id: MONDO:0014376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder with microcephaly and with or without ocular malformations or hypogonadotropic hypogonadism","secondary_identifiers":["MEDGEN:862965","DOID:0070057","GARD:16023","OMIM:615866","UMLS:C4014528"],"synonyms":[{"name":"CSS9","type":"exact"},{"name":"Coffin-Siris syndrome 9","type":"exact"},{"name":"MRD27","type":"exact"},{"name":"autosomal dominant intellectual disability 27","type":"exact"},{"name":"autosomal dominant mental retardation 27","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 27","type":"related"},{"name":"intellectual disability, autosomal dominant 27","type":"exact"},{"name":"intellectual disability, autosomal dominant type 27","type":"exact"},{"name":"mental retardation, autosomal dominant 27","type":"related"},{"name":"mental retardation, autosomal dominant type 27","type":"exact"}],"termid":"MONDO:0014376","xrefs":{"Monarch":{"xref_id":"0014376"}}}


id: GO:0047961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine.","definition_xrefs":["EC:2.3.1.13","MetaCyc:GLYCINE-N-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glycine N-acyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2534040","RHEA:19869"],"synonyms":[{"name":"acyl-CoA:glycine N-acyltransferase activity","type":"related"},{"name":"glycine acyltransferase activity","type":"related"},{"name":"glycine-N-acylase activity","type":"related"}],"termid":"GO:0047961"}


id: GO:2000120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium-dependent phosphate transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of sodium-dependent phosphate transport","termid":"GO:2000118"},{"relation_name":"positively_regulates","term_name":"sodium-dependent phosphate transport","termid":"GO:0044341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sodium-dependent phosphate transport","termid":"GO:2000120"}


id: GO:0046752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which viral capsid precursors are transported to a specific location in the nucleus, thus accumulating the necessary components for assembly of a capsid.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete viral capsid precursor transport to host cell nucleus (obsolete GO:0046752)","synonyms":[{"name":"establishment and maintenance of viral capsid precursor localization in nucleus","type":"broad"},{"name":"localization of viral capsid precursors in nucleus","type":"broad"},{"name":"nuclear localization of viral capsid precursors","type":"broad"},{"name":"viral capsid precursor localisation in host cell nucleus","type":"broad"},{"name":"viral capsid precursor localization in host cell nucleus","type":"broad"},{"name":"viral capsid precursor localization to host cell nucleus","type":"broad"}],"termid":"GO:0046752"}


id: GO:0006915
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79889,74286],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0043065"}]},"cv_name":"biological_process","definition":"A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.","definition_xrefs":["GOC:cjm","GOC:tb","GOC:go_curators","PMID:18846107","GOC:dhl","ISBN:0198506732","PMID:21494263","GOC:ecd","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0008632","Reactome:R-HSA-109581","Wikipedia:Apoptosis","GO:0006917"],"synonyms":[{"name":"activation of apoptosis","type":"narrow"},{"name":"apoptosis","type":"narrow"},{"name":"apoptosis activator activity","type":"related"},{"name":"apoptosis signaling","type":"narrow"},{"name":"apoptotic cell death","type":"exact"},{"name":"apoptotic program","type":"narrow"},{"name":"apoptotic programmed cell death","type":"exact"},{"name":"caspase-dependent programmed cell death","type":"related"},{"name":"cell suicide","type":"broad"},{"name":"cellular suicide","type":"broad"},{"name":"commitment to apoptosis","type":"related"},{"name":"induction of apoptosis","type":"related"},{"name":"induction of apoptosis by p53","type":"related"},{"name":"programmed cell death by apoptosis","type":"exact"},{"name":"signaling (initiator) caspase activity","type":"related"},{"name":"type I programmed cell death","type":"narrow"}],"termid":"GO:0006915","terms_by_termid":{"GO:0043065":null}}


id: PBO:0067201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 266, pseudogene","termid":"PBO:0067201"}


id: PBO:0076702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 3 pseudogene 1","termid":"PBO:0076702"}


id: MONDO:0015763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 2 is a rare chromosomal anomaly syndrome, with a highly variable phenotype, principally characterized by intrauterine growth restriction, growth and motor delay, craniofacial dysmorphism (e.g. microcephaly, hypertelorism, micro/anophthalmia, midface hypoplasia, cleft lip/palate), congenital heart and neural tube defects, as well as various skeletal (e.g. scoliosis, radioulnar hypoplasia, preaxial polydactyly) and gastrointestinal (e.g. intestinal malrotation, Hirschsprung disease) anomalies. Central nervous system malformations (including ventriculomegaly, thin corpus callosum, spina bifida) have also been reported.","definition_xrefs":["Orphanet:1723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 2 disorder","termid":"MONDO:0700009"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 2","secondary_identifiers":["GARD:5331","SCTID:764623009","UMLS:C4707010","MEDGEN:1631294"],"synonyms":[{"name":"Mosaic trisomy chromosome 2","type":"exact"},{"name":"Mosaic trisomy type 2","type":"exact"},{"name":"trisomy 2 mosaicism","type":"exact"}],"termid":"MONDO:0015763","xrefs":{"Monarch":{"xref_id":"0015763"}}}


id: PBO:0074859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 45C","termid":"PBO:0074859"}


id: GO:0071508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK activity involved in conjugation with cellular fusion (obsolete GO:0071508)","synonyms":[{"name":"activation of MAPK activity involved in mating response","type":"related"},{"name":"conjugation with cellular fusion, activation of MAPK activity","type":"exact"}],"termid":"GO:0071508"}


id: PBO:0048025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRY like transcription coactivator","termid":"PBO:0048025"}


id: PBO:0041173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B and T lymphocyte associated","termid":"PBO:0041173"}


id: PATO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality pertaining to the degree to which an object contains an opening, aperture, orifice or vent.","definition_xrefs":["PATOC:CJM","PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"closure","termid":"PATO:0000136"}


id: GO:0006367
data:
  {"annotated_genes":["SJAG_02303","SJAG_04755","SJAG_03694","SJAG_00758","SJAG_03095","SJAG_04852","SJAG_04420","SJAG_00584","SJAG_03211","SJAG_02551","SJAG_05020","SJAG_02391","SJAG_02101","SJAG_01513","SJAG_01016","SJAG_02314","SJAG_04038","SJAG_02254","SJAG_00087","SJAG_02872","SJAG_04917","SJAG_07011","SJAG_03884","SJAG_01952","SJAG_00116","SJAG_03668","SJAG_05313","SJAG_01611","SJAG_00421","SJAG_03576","SJAG_01111","SJAG_00184","SJAG_00872","SJAG_02385","SJAG_00650","SJAG_03441","SJAG_02691","SJAG_00769","SJAG_05341","SJAG_02571","SJAG_03752","SJAG_02549","SJAG_02466","SJAG_02066","SJAG_02494","SJAG_00540","SJAG_02174","SJAG_02773","SJAG_01475","SJAG_01713","SJAG_00150","SJAG_00995","SJAG_00873","SJAG_03366","SJAG_03787","SJAG_00342","SJAG_00901","SJAG_01711","SJAG_04205","SJAG_04596","SJAG_03285","SJAG_00512","SJAG_01110","SJAG_05192","SJAG_02500","SJAG_00741","SJAG_04977","SJAG_03590","SJAG_03900","SJAG_00159","SJAG_00868","SJAG_04989","SJAG_04613","SJAG_00766","SJAG_00297","SJAG_03622","SJAG_04705","SJAG_01207","SJAG_04097","SJAG_03033","SJAG_04820","SJAG_02927","SJAG_02849","SJAG_02329","SJAG_04614","SJAG_03431","SJAG_02981","SJAG_03107","SJAG_03839","SJAG_00349","SJAG_03758","SJAG_00896","SJAG_04654","SJAG_02170","SJAG_00641","SJAG_01765","SJAG_04030","SJAG_01622","SJAG_00735","SJAG_00119","SJAG_00095","SJAG_04099","SJAG_02869","SJAG_00904","SJAG_04758","SJAG_01658","SJAG_03145","SJAG_01465","SJAG_05203","SJAG_00581","SJAG_04213","SJAG_01325","SJAG_03255","SJAG_04576","SJAG_00045","SJAG_03618","SJAG_02458","SJAG_01653","SJAG_04647","SJAG_02589","SJAG_04274","SJAG_02447","SJAG_00743","SJAG_01403","SJAG_01436","SJAG_03944","SJAG_03421","SJAG_01523","SJAG_02768","SJAG_03776","SJAG_03579","SJAG_00746","SJAG_00739","SJAG_02846","SJAG_03573","SJAG_03206","SJAG_02541","SJAG_04005","SJAG_01808","SJAG_03599","SJAG_01230","SJAG_02798","SJAG_00909","SJAG_00440","SJAG_00458","SJAG_04894","SJAG_00441","SJAG_04368","SJAG_04194","SJAG_02906","SJAG_01710","SJAG_01771","SJAG_01804"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57537,67939,70470,70662,71205,73123,76529,79302,79482,80655,80733,90214,92359,92498,94235,94420,95901,97135,100548,103474,103934,105791,105831,108017,108209,108806,112417,113297,114559,115160,115472],"is_not":false,"summary":null,"term":"GO:0006367"},{"annotations":[79898,90032],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[94662,99346,94773,98997,106021,106698,109046,106374,87768,96185,103735,119264,115627,91004,109073,90691,106563,102276,95705,103993,115064],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060261"},{"annotations":[70850,94468,67581,72279,74028,75276,75947,77183,71694,71046,77589,74824],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051123"},{"annotations":[113306,107227,88813,89433,91020,93120,107075,113461,107649,115586,117896,87973,117944,116616,94104,108198,115050,103686,115732,89605,95797,92619,99463,104888,106099,107762,91735,93839,88121,114728,94506,109901,116034,112882,88663,117781,105950,90915,96771,94631,98990,95772,101298,115718,94334,98824,117235,88479,104166,108000,94534,109669,109793,98145,101882,113480,114552,94458,109390,91034,105358,90119,114637,94444,116866,105350,112082,114563,97409,99713,117874,96215,98559,110938,113650,115342,103100,116677,96974,118295,103439,94478,88302,90391,96208,94966,108786,117600,110803,89198],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045815"},{"annotations":[77587],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001174"}]},"cv_name":"biological_process","definition":"A transcription initiation process that takes place at a RNA polymerase II gene promoter. Messenger RNAs (mRNA) genes, as well as some non-coding RNAs, are transcribed by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":153,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00087":null,"SJAG_00095":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00184":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00349":null,"SJAG_00421":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00458":null,"SJAG_00512":null,"SJAG_00540":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00650":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00741":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00758":null,"SJAG_00766":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00872":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_00901":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00995":null,"SJAG_01016":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01207":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01403":null,"SJAG_01436":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01523":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01710":null,"SJAG_01711":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01771":null,"SJAG_01804":null,"SJAG_01808":null,"SJAG_01952":null,"SJAG_02066":null,"SJAG_02101":null,"SJAG_02170":null,"SJAG_02174":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02391":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02494":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02551":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02691":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_03033":null,"SJAG_03095":null,"SJAG_03107":null,"SJAG_03145":null,"SJAG_03206":null,"SJAG_03211":null,"SJAG_03255":null,"SJAG_03285":null,"SJAG_03366":null,"SJAG_03421":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03573":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03590":null,"SJAG_03599":null,"SJAG_03618":null,"SJAG_03622":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03884":null,"SJAG_03900":null,"SJAG_03944":null,"SJAG_04005":null,"SJAG_04030":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04099":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04614":null,"SJAG_04647":null,"SJAG_04654":null,"SJAG_04705":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04820":null,"SJAG_04852":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04977":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05203":null,"SJAG_05313":null,"SJAG_05341":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"transcription initiation at RNA polymerase II promoter","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-75953","Reactome:R-HSA-73779","Reactome:R-HSA-383280","Reactome:R-HSA-167161","Reactome:R-HSA-2032785","Reactome:R-HSA-350054"],"synonyms":[{"name":"transcription initiation from Pol II promoter","type":"exact"},{"name":"transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0006367","terms_by_termid":{"GO:0001174":null,"GO:0006367":null,"GO:0045815":null,"GO:0045899":null,"GO:0051123":null,"GO:0060261":null}}


id: GO:0044340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to modulating the rate or frequency of cell proliferation.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of cell proliferation (obsolete GO:0044340)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of cell proliferation","type":"exact"}],"termid":"GO:0044340"}


id: GO:0030005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent or trivalent cations at the level of a cell.","definition_xrefs":["GOC:mah","GOC:ceb"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular di-, tri-valent inorganic cation homeostasis (obsolete GO:0030005)","synonyms":[{"name":"cellular di-, tri-valent inorganic cation homeostasis","type":"exact"}],"termid":"GO:0030005"}


id: PBO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase Stp1","termid":"PBO:0002266"}


id: PBO:0041238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 100","termid":"PBO:0041238"}


id: MONDO:0013126
data:
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id: PBO:0054220
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id: GO:0018267
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id: PBO:0046485
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id: GO:0010776
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id: PBO:0047816
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id: GO:0005334
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id: PBO:0054376
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id: MONDO:0005588
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id: GO:0007154
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id: PR:Q7Z995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19G7.18c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19G7.18c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.18c","synonyms":[{"name":"Spom972h-SPBC19G7.18c","type":"exact"}],"termid":"PR:Q7Z995"}


id: FYPO:0000312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a normal germ tube, and undergoes septation, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with normal germ tube morphology","termid":"FYPO:0000310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination with normal, septated germ tube morphology","synonyms":[{"name":"inviable following spore germination with normal, septated germ tube morphology","type":"exact"},{"name":"inviable germinated spore with normal, septated germ tube morphology","type":"exact"},{"name":"lethal after spore germination with normal, septated germ tube morphology","type":"exact"}],"termid":"FYPO:0000312"}


id: GO:1901372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any trehalose biosynthetic process that is involved in ascospore formation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose biosynthetic process involved in ascospore formation (obsolete GO:1901372)","synonyms":[{"name":"mycose biosynthesis involved in ascospore biosynthesis","type":"exact"},{"name":"mycose biosynthesis involved in ascospore formation","type":"exact"},{"name":"mycose biosynthetic process involved in ascospore biosynthesis","type":"exact"},{"name":"mycose biosynthetic process involved in ascospore formation","type":"exact"},{"name":"mykose biosynthesis involved in ascospore biosynthesis","type":"exact"},{"name":"mykose biosynthesis involved in ascospore formation","type":"exact"},{"name":"mykose biosynthetic process involved in ascospore biosynthesis","type":"exact"},{"name":"mykose biosynthetic process involved in ascospore formation","type":"exact"},{"name":"trehalose anabolism involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose anabolism involved in ascospore formation","type":"exact"},{"name":"trehalose biosynthesis involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose biosynthesis involved in ascospore formation","type":"exact"},{"name":"trehalose biosynthetic process involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose formation involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose formation involved in ascospore formation","type":"exact"},{"name":"trehalose synthesis involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose synthesis involved in ascospore formation","type":"exact"}],"termid":"GO:1901372"}


id: GO:0050492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + sn-glycerol-1-phosphate = NAD(P)H + H+ + dihydroxy-acetone-phosphate.","definition_xrefs":["EC:1.1.1.261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycerol-1-phosphate dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:1.1.1.261-RXN"],"synonyms":[{"name":"sn-glycerol-1-phosphate:NAD(P)+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050492"}


id: GO:0046898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cycloheximide stimulus. Cycloheximide (actidione) is an antibiotic produced by some Streptomyces species which interferes with protein synthesis in eukaryotes.","definition_xrefs":["ISBN:0198506732","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cycloheximide","synonyms":[{"name":"response to actidione","type":"exact"}],"termid":"GO:0046898"}


id: GO:1904527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microtubule binding.","definition_xrefs":["GOC:als","PMID:24520051","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of microtubule binding","termid":"GO:1904526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microtubule binding","synonyms":[{"name":"down regulation of microtubule binding","type":"exact"},{"name":"down regulation of microtubule severing activity","type":"related"},{"name":"down regulation of microtubule/chromatin interaction","type":"related"},{"name":"down-regulation of microtubule binding","type":"exact"},{"name":"down-regulation of microtubule severing activity","type":"related"},{"name":"down-regulation of microtubule/chromatin interaction","type":"related"},{"name":"downregulation of microtubule binding","type":"exact"},{"name":"downregulation of microtubule severing activity","type":"related"},{"name":"downregulation of microtubule/chromatin interaction","type":"related"},{"name":"inhibition of microtubule binding","type":"narrow"},{"name":"inhibition of microtubule severing activity","type":"related"},{"name":"inhibition of microtubule/chromatin interaction","type":"related"},{"name":"negative regulation of microtubule severing activity","type":"related"},{"name":"negative regulation of microtubule/chromatin interaction","type":"related"}],"termid":"GO:1904527"}


id: PBO:0044733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 1","termid":"PBO:0044733"}


id: GO:0001003
data:
  {"annotated_genes":["SJAG_03354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70156],"is_not":false,"summary":null,"term":"GO:0001003"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of DNA that is a part of a type 2 promoter that controls transcription by RNA polymerase III. Type 2 promoters consist of an A box and a B box downstream of the transcription start site within the sequence within the sequence of the mature RNA. Type 2 promoters are found in many tRNA genes as well as in other small RNAs.","definition_xrefs":["PMID:12381659","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","termid":"GO:0000992"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"RNA polymerase III type 2 promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001031"],"synonyms":[{"name":"RNA polymerase III type 2 promoter DNA binding","type":"related"}],"termid":"GO:0001003","terms_by_termid":{"GO:0001003":null}}


id: PBO:0072753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 3","termid":"PBO:0072753"}


id: GO:0110026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA strand resection involved in replication fork processing.","definition_xrefs":["GOC:mah","PMID:28475874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand resection involved in replication fork processing","termid":"GO:0110025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA strand resection involved in replication fork processing","termid":"GO:0110026"}


id: PBO:0075695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid 5 alpha-reductase 3 pseudogene 1","termid":"PBO:0075695"}


id: GO:0044052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via symbiont membrane budding, the evagination of a membrane resulting in formation of a vesicle.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by membrane budding (obsolete GO:0044052)","synonyms":[{"name":"interaction with host via substance released by symbiont membrane budding","type":"exact"}],"termid":"GO:0044052"}


id: PBO:0053608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 641","termid":"PBO:0053608"}


id: PBO:0089278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L2","termid":"PBO:0089278"}


id: PBO:0011097
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HXK2","termid":"PBO:0011097"}


id: PBO:0086412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GPI-anchored protein; localized to the cell wall; involved in foam formation in sake mash by conferring hydrophobicity to the cell surface","termid":"PBO:0086412"}


id: PBO:0012577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 4 Pre6","termid":"PBO:0012577"}


id: PBO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal family","termid":"PBO:0000088"}


id: PBO:0080217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vimentin 2, pseudogene","termid":"PBO:0080217"}


id: MONDO:0007260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Car factor deficiency","secondary_identifiers":["MESH:C566176","MEDGEN:354615","UMLS:C1861898","OMIM:114650"],"synonyms":[{"name":"Car factor deficiency","type":"exact"}],"termid":"MONDO:0007260","xrefs":{"Monarch":{"xref_id":"0007260"}}}


id: MONDO:0975801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, acute transient","secondary_identifiers":["OMIM:620950"],"termid":"MONDO:0975801","xrefs":{"Monarch":{"xref_id":"0975801"}}}


id: PBO:0034236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tracheates","termid":"PBO:0034236"}


id: PBO:0049491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 1","termid":"PBO:0049491"}


id: PBO:0042203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G2 pseudogene 1","termid":"PBO:0042203"}


id: PBO:0049923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homogentisate 1,2-dioxygenase","termid":"PBO:0049923"}


id: PBO:0116846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational activator Sls1","termid":"PBO:0116846"}


id: MONDO:0013315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PDE6G gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PDE6G-related retinopathy","termid":"MONDO:1040034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 57","secondary_identifiers":["MEDGEN:462171","UMLS:C3150821","GARD:15679","OMIM:613582","DOID:0110407","ICD10CM:H35.5"],"synonyms":[{"name":"PDE6G retinitis pigmentosa","type":"exact"},{"name":"RP57","type":"exact"},{"name":"retinitis pigmentosa 57","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PDE6G","type":"exact"},{"name":"retinitis pigmentosa type 57","type":"exact"}],"termid":"MONDO:0013315","xrefs":{"Monarch":{"xref_id":"0013315"}}}


id: PBO:0051433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-15 (pseudogene)","termid":"PBO:0051433"}


id: MONDO:1012116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypomyelinogenesis, non-human animal","termid":"MONDO:1011845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, cattle","secondary_identifiers":["OMIA:000527-9913"],"termid":"MONDO:1012116","xrefs":{"Monarch":{"xref_id":"1012116"}}}


id: MONDO:0015906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with hypergonadotropic hypogonadism (obsolete MONDO:0015906)","secondary_identifiers":["Orphanet:181441"],"synonyms":[{"name":"rare disorder with primary hypogonadism","type":"exact"}],"termid":"MONDO:0015906","xrefs":{"Monarch":{"xref_id":"0015906"}}}


id: MONDO:0004935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired carotenemia (obsolete MONDO:0004935)","termid":"MONDO:0004935","xrefs":{"Monarch":{"xref_id":"0004935"}}}


id: PBO:0091180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apocytochrome b","termid":"PBO:0091180"}


id: GO:0035131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the pelvic fin are generated and organized. The pelvic fins are bilaterally paired fins mounted in a ventral-lateral position on most fish. These fins are used primarily for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"is_a","term_name":"pelvic fin morphogenesis","termid":"GO:0035139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic pelvic fin morphogenesis","termid":"GO:0035131"}


id: PBO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phosphatidylserine_absent_from_cell","termid":"PBO:0030335"}


id: PBO:0068438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 8, pseudogene","termid":"PBO:0068438"}


id: MONDO:0043143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"},{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia microtia fetal akinesia","secondary_identifiers":["UMLS:C2931224","Orphanet:2547","MEDGEN:444005","MESH:C536513","GARD:3650"],"synonyms":[{"name":"Thomas Jewett Raines syndrome","type":"related"},{"name":"Thomas-Jewett-Raines syndrome","type":"related"},{"name":"fetal akinesia with characteristic facial appearance, severe microphthalmia, microtia, and truncus arteriosus","type":"related"},{"name":"foetal akinesia with characteristic facial appearance, severe microphthalmia, microtia, and truncus arteriosus","type":"related"},{"name":"microphthalmia-microtia-fetal akinesia","type":"related"}],"termid":"MONDO:0043143","xrefs":{"Monarch":{"xref_id":"0043143"}}}


id: GO:0141135
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a chemokine signaling pathway, a G protein-coupled receptor signal transduction pathway activated by a chemokine. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16581912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host G protein-coupled receptor signal transduction","termid":"GO:0075120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host chemokine signal transduction pathway","termid":"GO:0141135"}


id: MONDO:0008566
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  {"annotated_genes":["SJAG_01970","SJAG_04067","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86181,87623,87624],"is_not":false,"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"},{"relation_name":"is_a","term_name":"familial papillary or follicular thyroid carcinoma","termid":"MONDO:0017895"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid cancer, nonmedullary, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C572845","UMLS:C4225426","GARD:5206","MEDGEN:904175","OMIM:188470"],"synonyms":[{"name":"FTC","type":"related"},{"name":"NMTC2","type":"related"},{"name":"thyroid cancer, follicular","type":"related"},{"name":"thyroid cancer, nonmedullary, 2","type":"exact"},{"name":"thyroid cancer, nonmedullary, 2, autosomal dominant, somatic mutation","type":"exact"},{"name":"thyroid cancer, nonmedullary, type 2","type":"exact"},{"name":"thyroid carcinoma, follicular","type":"related"},{"name":"thyroid carcinoma, follicular, autosomal dominant, somatic mutation","type":"exact"},{"name":"thyroid carcinoma, follicular, somatic","type":"exact"}],"termid":"MONDO:0008566","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0008566"}}}


id: PBO:0082483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cargo-binding mu subunit of AP-2; AP-2 is a heterotetrameric endocytic cargo-binding adaptor that facilitates uptake of membrane proteins during clathrin-mediated endocytosis; Apm4p is required for AP-2 function and localization, and binds cell wall stress receptor Mid2p; AP-2 is required for cell polarity responses to pheromone, nutritional status and cell wall damage in S. cerevisiae, and for hyphal growth in C. albicans; AP-2 complex is conserved in mammals","termid":"PBO:0082483"}


id: GO:0006191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxyinosine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"},{"relation_name":"is_a","term_name":"deoxyinosine biosynthetic process","termid":"GO:0046095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyinosine salvage","termid":"GO:0006191"}


id: FYPO:0003122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of autophosphorylation of one or more specific proteins, or of specific protein sites, is decreased during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during cellular response to DNA damage","termid":"FYPO:0002897"},{"relation_name":"is_a","term_name":"decreased protein autophosphorylation during vegetative growth","termid":"FYPO:0003298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein autophosphorylation during cellular response to DNA damage","synonyms":[{"name":"decreased protein autophosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased protein autophosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced protein autophosphorylation during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0003122"}


id: PBO:0029160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sensitivity_to_chemical","termid":"PBO:0029160"}


id: PBO:0057410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548l","termid":"PBO:0057410"}


id: MONDO:0014298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PDE4D haploinsufficiency syndrome is a rare syndromic intellectual disability characterized by developmental delay, intellectual disability, low body mass index, long arms, fingers and toes, prominent nose and small chin.","definition_xrefs":["Orphanet:439822"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 5","termid":"MONDO:0016904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5q12 deletion syndrome","secondary_identifiers":["DOID:0060421","OMIM:615668","GARD:17742","UMLS:C3810282","MEDGEN:816612"],"synonyms":[{"name":"PDE4D haploinsufficiency syndrome","type":"related"},{"name":"chromosome 5q12 deletion syndrome","type":"exact"}],"termid":"MONDO:0014298","xrefs":{"Monarch":{"xref_id":"0014298"}}}


id: MOD:01396
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a 5-hydroxy-3-methyl-L-proline.","definition_xrefs":["PubMed:7592021","PubMed:8557573","RESID:AA0473"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"monohydroxylated proline","termid":"MOD:01024"},{"relation_name":"has_functional_parent","term_name":"monomethylated proline","termid":"MOD:01417"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-3-methyl-L-proline (Pro)","synonyms":[{"name":"(2S,3S,5Xi)-5-hydroxy-3-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-hydroxy-3-methyl-L-proline","type":"exact"},{"name":"5-hydroxy-3-methylproline","type":"exact"},{"name":"5Hy3MePro","type":"exact"},{"name":"MOD_RES 5-hydroxy-3-methylproline (Ile)","type":"exact"},{"name":"beta-methyl-delta-hydroxyproline","type":"exact"}],"termid":"MOD:01396"}


id: GO:0016779
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  {"annotated_genes":["SJAG_01352","SJAG_02954","SJAG_00731","SJAG_02194","SJAG_02288","SJAG_05239","SJAG_01765","SJAG_03181","SJAG_00637","SJAG_03356","SJAG_04030","SJAG_02725","SJAG_00611","SJAG_00153","SJAG_00946","SJAG_02658","SJAG_03475","SJAG_02370","SJAG_05979","SJAG_00119","SJAG_03761","SJAG_04190","SJAG_03578","SJAG_04089","SJAG_02101","SJAG_00619","SJAG_02627","SJAG_00426","SJAG_04791","SJAG_01713","SJAG_00458","SJAG_01444","SJAG_01724","SJAG_03468","SJAG_04106","SJAG_02070","SJAG_02506","SJAG_01176","SJAG_02178","SJAG_03257","SJAG_16460","SJAG_01089","SJAG_04934","SJAG_00399","SJAG_04161","SJAG_01937","SJAG_04994","SJAG_02908","SJAG_03921","SJAG_01704","SJAG_03906","SJAG_00814","SJAG_01302","SJAG_01562","SJAG_01313","SJAG_04700","SJAG_04233","SJAG_02653","SJAG_04894","SJAG_03144","SJAG_04261","SJAG_03014","SJAG_01823","SJAG_05197","SJAG_02600","SJAG_03035","SJAG_04628","SJAG_00797","SJAG_04946","SJAG_02720","SJAG_02383","SJAG_02889","SJAG_01164","SJAG_01500","SJAG_01443","SJAG_02818","SJAG_00890","SJAG_04877","SJAG_03188","SJAG_03896","SJAG_03932","SJAG_03563","SJAG_04408"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62140,66490],"is_not":false,"summary":null,"term":"GO:0016779"},{"annotations":[62269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070566"},{"annotations":[70616,75266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052929"},{"annotations":[97331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141192"},{"annotations":[70615,75265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052927"},{"annotations":[70213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004105"},{"annotations":[70775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017125"},{"annotations":[95566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034061"},{"annotations":[71541,115740],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0030337"},{"annotations":[74513,70773,73601,58213,77223,78036,78305,103200,75334,75358,103149,75187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003887"},{"annotations":[64389,58801,96202,62648,57711,65188,67317,105210,57262,61209,65863,101828,79298,63778,109602,58577,112712,116782,61139,105658,101868,56973,62400,64203,65613,102856,103277,58478,63539,110106,116003,64037,117095,77770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003899"},{"annotations":[75711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004306"},{"annotations":[78914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003919"},{"annotations":[68148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061710"},{"annotations":[105563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016979"},{"annotations":[103408,75806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004475"},{"annotations":[75868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004484"},{"annotations":[75079,71023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000309"},{"annotations":[75081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004515"},{"annotations":[80397,119860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004605"},{"annotations":[96576,76703,64107,59199,69389,79332,78546,69254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990817"},{"annotations":[80167,80038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050265"},{"annotations":[72265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003968"},{"annotations":[66973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004781"},{"annotations":[70926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003720"},{"annotations":[77221],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010521"},{"annotations":[73644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008193"},{"annotations":[72981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008108"},{"annotations":[76918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003977"},{"annotations":[72887,80372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003983"}]},"cv_name":"molecular_function","definition":"Catalysis 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id: MONDO:0056822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotonia congenita","secondary_identifiers":["UMLS:C0002735","OMIM:205000","MEDGEN:8042"],"synonyms":[{"name":"Oppenheim disease","type":"related"},{"name":"amyotonia congenita","type":"exact"}],"termid":"MONDO:0056822","xrefs":{"Monarch":{"xref_id":"0056822"}}}


id: GO:0046828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of movement of RNA from the cytoplasm to the nucleus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"regulates","term_name":"RNA import into nucleus","termid":"GO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"regulation of RNA import into nucleus","synonyms":[{"name":"regulation of RNA import into cell nucleus","type":"exact"},{"name":"regulation of RNA transport from cytoplasm to nucleus","type":"exact"},{"name":"regulation of RNA-nucleus import","type":"exact"}],"termid":"GO:0046828"}


id: PBO:0056346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 4","termid":"PBO:0056346"}


id: GO:1904908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion, telomeric.","definition_xrefs":["GO_REF:0000058","GOC:rph","GOC:BHF_telomere","GOC:TermGenie","PMID:26373281","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034183"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:1904907"},{"relation_name":"negatively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:0099403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"down regulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"down regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"down regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"down regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"down-regulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"down-regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"down-regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"down-regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"downregulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"downregulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"downregulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"downregulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"inhibition of maintenance of mitotic sister chromatid cohesion, telomeric","type":"narrow"},{"name":"inhibition of maintenance of mitotic sister chromatin cohesion at telomere","type":"narrow"},{"name":"inhibition of maintenance of sister chromatin cohesion at telomere at mitosis","type":"narrow"},{"name":"inhibition of maintenance of telomeric mitotic sister chromatin cohesion","type":"narrow"},{"name":"negative regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"negative regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:1904908"}


id: PBO:0076656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBX18 antisense RNA 1","termid":"PBO:0076656"}


id: PR:Q9P7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.10c","synonyms":[{"name":"Spom972h-ssr3","type":"exact"}],"termid":"PR:Q9P7S3"}


id: MONDO:0100035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of epilepsy that is conceptualized as having a distinct structural brain abnormality that has been demonstrated to be associated with a substantially increased risk of epilepsy in appropriately designed studies. The structural brain abnormality can be acquired (such as due to stroke, trauma or infection) or may be of genetic origin; however, as we currently understand it, the structural brain abnormality is a separate disorder interposed between the acquired or genetic defect and the epilepsy.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"structural epilepsy","secondary_identifiers":["MEDGEN:1843494","UMLS:C4524097"],"termid":"MONDO:0100035","xrefs":{"Monarch":{"xref_id":"0100035"}}}


id: PBO:0048908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member C, pseudogene","termid":"PBO:0048908"}


id: PBO:0083273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene RPL22A; diploid mutant displays a weak budding pattern phenotype in a systematic assay","termid":"PBO:0083273"}


id: GO:0048657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an anther cell wall tapetum cell. The tapetum is a layer of cells that provides a source of nutrition for the pollen grains as they mature.","definition_xrefs":["GOC:jid","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"anther wall tapetum formation","termid":"GO:0048656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum cell differentiation","synonyms":[{"name":"tapetal cell differentiation","type":"broad"}],"termid":"GO:0048657"}


id: FYPO:0001819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which phosphoribosylformylglycinamidine cyclo-ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphoribosylformylglycinamidine cyclo-ligase activity","termid":"FYPO:0001818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished phosphoribosylformylglycinamidine cyclo-ligase activity","synonyms":[{"name":"abolished AIR synthase activity","type":"exact"},{"name":"abolished AIR synthetase activity","type":"exact"},{"name":"phosphoribosylformylglycinamidine cyclo-ligase activity abolished","type":"exact"}],"termid":"FYPO:0001819"}


id: PBO:0002729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-HIT","termid":"PBO:0002729"}


id: GO:0090674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of an endothelial cell to the extracellular matrix via fibronectin.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","PMID:19460962","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell-matrix adhesion","termid":"GO:0090673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}


id: GO:0046267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of triethanolamine, a combustible, hygroscopic, colorless liquid commonly used in dry-cleaning solutions, cosmetics, detergents, textile processing, wool scouring, and as a corrosion inhibitor and pharmaceutical alkalizing agent.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete triethanolamine catabolic process (obsolete GO:0046267)","synonyms":[{"name":"triethanolamine breakdown","type":"exact"},{"name":"triethanolamine catabolism","type":"exact"},{"name":"triethanolamine degradation","type":"exact"}],"termid":"GO:0046267"}


id: PR:Q9UTK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox16 gene.","definition_xrefs":["UniProtKB:Q9UTK1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein cox16, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.08","synonyms":[{"name":"Spom972h-cox16","type":"exact"}],"termid":"PR:Q9UTK1"}


id: PBO:0057986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3912","termid":"PBO:0057986"}


id: PBO:0083028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this putative ORF was included in the original annotation of Chromosome III but was later withdrawn","termid":"PBO:0083028"}


id: PBO:0003458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad18 homolog Rhp18","termid":"PBO:0003458"}


id: PR:P0CT37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-4 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.13c","synonyms":[{"name":"Spom972h-Tf2-4","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT37"}


id: GO:0000994
data:
  {"annotated_genes":["SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74045],"is_not":false,"summary":null,"term":"GO:0000994"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase III core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of seventeen subunits.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"RNA polymerase III core binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000994","terms_by_termid":{"GO:0000994":null}}


id: PBO:0031851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_export_from_nucleus","termid":"PBO:0031851"}


id: PBO:0043220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin binding box of aftiphilin containing 1","termid":"PBO:0043220"}


id: PBO:0056904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF4G domain containing","termid":"PBO:0056904"}


id: MONDO:0013122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary congenital glaucoma","termid":"MONDO:0000365"},{"relation_name":"is_a","term_name":"LTBP2-related ocular dysgenesis","termid":"MONDO:0100236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3, primary congenital, D","secondary_identifiers":["UMLS:C2751316","OMIM:613086","MEDGEN:416524","GARD:18226","MESH:C567765"],"synonyms":[{"name":"GLC3D","type":"related"},{"name":"glaucoma 3, primary congenital, D","type":"exact"},{"name":"glaucoma 3, primary congenital, type D","type":"exact"}],"termid":"MONDO:0013122","xrefs":{"Monarch":{"xref_id":"0013122"}}}


id: FYPO:0001387
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119827,119845,119846,119847],"is_not":false,"summary":null,"term":"FYPO:0001387"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells are grown at a temperature higher than standard.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability at high temperature","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_04464","SJAG_03575","SJAG_01956"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased viability at high temperature","type":"exact"},{"name":"loss of cell population viability at high temperature","type":"exact"},{"name":"loss of viability at restrictive temperature","type":"related"},{"name":"reduced viability at high temperature","type":"exact"}],"termid":"FYPO:0001387","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0001387":null}}


id: PBO:0074638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 31","termid":"PBO:0074638"}


id: PBO:0064648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase with EF-hand domain 2","termid":"PBO:0064648"}


id: PBO:0065246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 18","termid":"PBO:0065246"}


id: GO:0014734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of an organ due to an increase in size (not length) of individual muscle fibers without cell division. In the case of skeletal muscle cells this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle hypertrophy","termid":"GO:0014897"},{"relation_name":"is_a","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle hypertrophy","termid":"GO:0014734"}


id: PBO:0048501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 1","termid":"PBO:0048501"}


id: MOD:01273
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-serine residue.","definition_xrefs":["PubMed:8597590","Unimod:276#S","PubMed:15283597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-[4-(2-aminoethyl)benzenesulfonyl] serine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01273"}


id: PBO:0066026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 9","termid":"PBO:0066026"}


id: FYPO:0006345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of protein phosphorylation is longer than normal the cell is subject to nitrogen starvation. All phosphorylation may be affected, or only phosphorylation of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased duration of protein phosphorylation during nitrogen starvation","synonyms":[{"name":"increased duration of protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"prolonged protein phosphorylation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006345"}


id: PBO:0082138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of anaphase-promoting complex/cyclosome (APC/C); antagonist of the spindle assembly checkpoint; directs ubiquitination of cyclins resulting in mitotic exit; targets the APC/C to specific substrates including: Cdc20p, Ase1p, Cin8p, Fin1p and Clb5p; partially active in metaphase, and fully active in anaphase; cell-cycle regulated","termid":"PBO:0082138"}


id: GO:0043445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of acetone, propan-2-one.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acetone biosynthetic process (obsolete GO:0043445)","synonyms":[{"name":"2-propanone biosynthesis","type":"exact"},{"name":"2-propanone biosynthetic process","type":"exact"},{"name":"acetone anabolism","type":"exact"},{"name":"acetone biosynthesis","type":"exact"},{"name":"acetone formation","type":"exact"},{"name":"acetone synthesis","type":"exact"},{"name":"dimethyl ketone biosynthesis","type":"exact"},{"name":"dimethyl ketone biosynthetic process","type":"exact"},{"name":"propan-2-one biosynthesis","type":"exact"},{"name":"propan-2-one biosynthetic process","type":"exact"}],"termid":"GO:0043445"}


id: GO:0090240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of histone H4 acetylation, the modification of histone H4 by the addition of an acetyl group.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H4 acetylation (obsolete GO:0090240)","termid":"GO:0090240"}


id: PBO:0030721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_actinomycin_D","termid":"PBO:0030721"}


id: PBO:0050630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 5","termid":"PBO:0050630"}


id: PBO:0017631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase activator Whi2","termid":"PBO:0017631"}


id: PBO:0042708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxyl ester lipase pseudogene","termid":"PBO:0042708"}


id: PR:Q10156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lkh1 gene.","definition_xrefs":["UniProtKB:Q10156","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity protein kinase lkh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.11c","synonyms":[{"name":"Spom972h-lkh1","type":"exact"}],"termid":"PR:Q10156"}


id: FYPO:0004443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division","type":"exact"},{"name":"reduced protein localization to prospore membrane during meiosis II","type":"exact"}],"termid":"FYPO:0004443"}


id: PBO:0060541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 1","termid":"PBO:0060541"}


id: GO:2000296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide metabolic process","termid":"GO:0010727"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide catabolic process","termid":"GO:2000295"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide catabolic process","termid":"GO:0042744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide catabolic process","synonyms":[{"name":"negative regulation of H2O2 catabolic process","type":"exact"},{"name":"negative regulation of H2O2 scavenging","type":"related"},{"name":"negative regulation of detoxification of H2O2","type":"related"},{"name":"negative regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"negative regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"negative regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"negative regulation of hydrogen peroxide degradation","type":"exact"},{"name":"negative regulation of hydrogen peroxide removal","type":"related"},{"name":"negative regulation of hydrogen peroxide scavenging","type":"related"}],"termid":"GO:2000296"}


id: GO:0048836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the number of petals produced in a developing flower.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete specification of increased petal number (obsolete GO:0048836)","termid":"GO:0048836"}


id: PBO:0073295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 17","termid":"PBO:0073295"}


id: PBO:0028569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleotide-excision_repair_during_cellular_response_to_UV","termid":"PBO:0028569"}


id: MONDO:0019030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Acanthamoeba keratitis (obsolete MONDO:0019030)","termid":"MONDO:0019030","xrefs":{"Monarch":{"xref_id":"0019030"}}}


id: GO:0000814
data:
  {"annotated_genes":["SJAG_04936","SJAG_04912","SJAG_04024"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71335,72513,78783],"is_not":false,"summary":null,"term":"GO:0000814"}]},"cv_name":"cellular_component","definition":"An endosomal sorting complex required for transport and functions downstream of ESCRT I complex. It consists of the class E vacuolar protein sorting (Vps) proteins and is required for the membrane recruitment of ESCRT III complex and binds to ubiquitinated cargoes.","definition_xrefs":["PMID:12900393","PMID:12892785","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04024":null,"SJAG_04912":null,"SJAG_04936":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0031410","GO:0005575","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"ESCRT II complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"endosomal sorting complex required for transport","type":"broad"}],"termid":"GO:0000814","terms_by_termid":{"GO:0000814":null}}


id: SO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Bel-Pao superfamily are similar to LTRs in the Gypsy and Retrovirus superfamilies. Mainly described in metazoan genomes, this superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH and INT. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bel_Pao_LTR_retrotransposon","synonyms":[{"name":"Bel Pao LTR retrotransposon","type":"exact"},{"name":"Bel-Pao LTR retrotransposon","type":"exact"},{"name":"RLB retrotransposon","type":"exact"}],"termid":"SO:0002266"}


id: GO:0016826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid sulfur-nitrogen bond.","definition_xrefs":["EC:3.10.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on acid sulfur-nitrogen bonds","synonyms":[{"name":"hydrolase activity, acting on acid sulphur-nitrogen bonds","type":"exact"}],"termid":"GO:0016826"}


id: GO:0036297
data:
  {"annotated_genes":["SJAG_00727","SJAG_05280","SJAG_03994","SJAG_02200","SJAG_02556","SJAG_02294","SJAG_02690","SJAG_01410","SJAG_03068","SJAG_01644","SJAG_00819","SJAG_02031","SJAG_03734","SJAG_02334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75791,78301,97473,105284],"is_not":false,"summary":null,"term":"GO:0036297"},{"annotations":[89917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036299"},{"annotations":[110361,93326,93987,70427,75296],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901255"},{"annotations":[111915,100973,99383,103517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036298"}]},"cv_name":"biological_process","definition":"Removal of a DNA interstrand crosslink (a covalent attachment of DNA bases on opposite strands of the DNA) and restoration of the DNA. DNA interstrand crosslinks occur when both strands of duplex DNA are covalently tethered together (e.g. by an exogenous or endogenous agent), thus preventing the strand unwinding necessary for essential DNA functions such as transcription and replication.","definition_xrefs":["GOC:vw","PMID:22064477","PMID:16464006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_00819":null,"SJAG_01410":null,"SJAG_01644":null,"SJAG_02031":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02334":null,"SJAG_02556":null,"SJAG_02690":null,"SJAG_03068":null,"SJAG_03734":null,"SJAG_03994":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"interstrand cross-link repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6783310"],"synonyms":[{"name":"ICL repair","type":"exact"}],"termid":"GO:0036297","terms_by_termid":{"GO:0036297":null,"GO:0036298":null,"GO:0036299":null,"GO:1901255":null}}


id: PBO:0084632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase involved in methylation of histone H4 Lys5, -8, -12; S-adenosylmethionine-dependent; zinc-finger protein, contains one canonical and two unusual fingers in unusual arrangements; deletion enhances replication of positive-strand RNA virus","termid":"PBO:0084632"}


id: PBO:0042265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6B","termid":"PBO:0042265"}


id: GO:0045237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR1 chemokine receptor.","definition_xrefs":["GOC:ceb","PMID:11910892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-8 receptor binding","termid":"GO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CXCR1 chemokine receptor binding","synonyms":[{"name":"CXCR1 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0045237"}


id: PBO:0027956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pyridoxine:NADP_4-dehydrogenase_activity","termid":"PBO:0027956"}


id: GO:0061869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell migration.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast migration","termid":"GO:0010762"},{"relation_name":"regulates","term_name":"hepatic stellate cell migration","termid":"GO:0061868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell migration","termid":"GO:0061869"}


id: GO:0102529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: apigenin + S-adenosyl-L-methionine = genkwanin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"apigenin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14661"],"termid":"GO:0102529"}


id: GO:0150142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of CD86 biosynthetic process.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of CD86 production (obsolete GO:0150142)","synonyms":[{"name":"positive regulation of CD86 biosynthetic process","type":"exact"}],"termid":"GO:0150142"}


id: GO:0016842
data:
  {"annotated_genes":["SJAG_02850","SJAG_00903","SJAG_05287","SJAG_01461"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070626"},{"annotations":[70562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004056"},{"annotations":[76962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061928"},{"annotations":[77130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004018"},{"annotations":[74679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050385"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of amides or amidines by the cleavage of a carbon-nitrogen bond or the reverse reaction with an amide or amidine as a substrate.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_01461":null,"SJAG_02850":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"amidine-lyase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:4.3.2.-"],"termid":"GO:0016842","terms_by_termid":{"GO:0004018":null,"GO:0004056":null,"GO:0050385":null,"GO:0061928":null,"GO:0070626":null}}


id: PBO:0111947
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-basic zinc finger","termid":"PBO:0111947"}


id: PBO:0084939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mucin family member that functions as an osmosensor in the HOG pathway; large, highly glycosylated protein that functions redundantly with Msb2p in Sho1p-mediated osmostresss induction of the HOG signaling pathway; cytoplasmic domain interacts with Ahk1p a scaffold protein that prevents cross talk with the Kss1p MAPK of the filamentous growth pathway; mutant displays defects in beta-1,3 glucan synthesis and bud site selection","termid":"PBO:0084939"}


id: GO:0003225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cardiac left ventricular trabecular myocardium are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular cardiac muscle tissue morphogenesis","termid":"GO:0003220"},{"relation_name":"is_a","term_name":"ventricular trabecula myocardium morphogenesis","termid":"GO:0003222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left ventricular trabecular myocardium morphogenesis","termid":"GO:0003225"}


id: PBO:0087764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2 membrane-associated complex; involved in regulation of cell cycle-dependent actin cytoskeletal dynamics during polarized growth and cell wall integrity; BIT61 has a paralog, BIT2, that arose from the whole genome duplication","termid":"PBO:0087764"}


id: PBO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (predicted)","termid":"PBO:0003175"}


id: GO:0045061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of T cell selection that occurs in the thymus.","definition_xrefs":["PMID:12414722","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"},{"relation_name":"part_of","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymic T cell selection","synonyms":[{"name":"thymic T lymphocyte selection","type":"exact"},{"name":"thymic T-cell selection","type":"exact"},{"name":"thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045061"}


id: PBO:0113394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YMR317W is not an essential gene","termid":"PBO:0113394"}


id: PBO:0051031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 1 pseudogene 1","termid":"PBO:0051031"}


id: PBO:0059726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 34","termid":"PBO:0059726"}


id: PBO:0025499
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylaminuria","termid":"PBO:0025499"}


id: PATO:0002415
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Single lesion with expansion into surrounding tissue.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized","termid":"PATO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focally extensive","termid":"PATO:0002415"}


id: PBO:0091094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic spindle pole body protein, gamma tubulin complex linker-related Spo15","termid":"PBO:0091094"}


id: GO:0072387
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"flavin adenine dinucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"FAD or FADH2 metabolic process","type":"exact"},{"name":"flavin adenine dinucleotide metabolism","type":"exact"},{"name":"flavin-adenine dinucleotide metabolic process","type":"exact"}],"termid":"GO:0072387","terms_by_termid":{"GO:0006747":null}}


id: PBO:0091234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall structural constituent Isp3","termid":"PBO:0091234"}


id: PBO:0069116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 365, pseudogene","termid":"PBO:0069116"}


id: MONDO:0005991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermittent fever characterized by intervals of chills, fever, and splenomegaly each of which may last as long as 40 hours. It is caused by bartonella quintana and transmitted by the human louse.","definition_xrefs":["MESH:D014205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bartonellosis","termid":"MONDO:0005664"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trench fever","secondary_identifiers":["MEDGEN:21637","MedDRA:10044582","SCTID:82214002","ICD10CM:A79.0","GARD:18862","EFO:0007519","icd11.foundation:1587737629","DOID:11101","ICD9:083.1","Orphanet:64694","UMLS:C0040830"],"synonyms":[{"name":"Bartonella quintana caused disease or disorder","type":"exact"},{"name":"Bartonella quintana disease or disorder","type":"exact"},{"name":"Bartonella quintana infectious disease","type":"exact"},{"name":"His-Werner disease","type":"exact"},{"name":"Wolhynian fever","type":"exact"},{"name":"bartonellosis due to Bartonella quintana infection","type":"exact"},{"name":"fever, trench","type":"related"},{"name":"fevers, trench","type":"related"},{"name":"quintan fever","type":"exact"},{"name":"shin bone fever","type":"exact"},{"name":"tibialgic fever","type":"exact"},{"name":"trench fever","type":"exact"},{"name":"trench fevers","type":"related"}],"termid":"MONDO:0005991","xrefs":{"Monarch":{"xref_id":"0005991"}}}


id: FYPO:0006186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of contractile ring assembly is increased. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0004803","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"increased rate of actomyosin contractile ring assembly","synonyms":[{"name":"increased rate of actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"increased rate of actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"increased rate of contractile ring assembly","type":"exact"},{"name":"increased rate of cytokinetic contractile ring assembly","type":"exact"},{"name":"increased rate of mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0006186"}


id: MONDO:0020855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 32","secondary_identifiers":["UMLS:C4748253","DOID:0111925","MEDGEN:1648444","OMIM:618115","GARD:16292"],"synonyms":[{"name":"SPGF32","type":"exact"},{"name":"spermatogenic failure 32","type":"exact"}],"termid":"MONDO:0020855","xrefs":{"Monarch":{"xref_id":"0020855"}}}


id: MOD:01835
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine sulfone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfone","termid":"MOD:00256"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine sulfone","termid":"MOD:01835"}


id: GO:0019418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of sulfide to elemental sulfur in a higher oxidation state, or to sulfite or sulfate.","definition_xrefs":["MetaCyc:Sulfide-Oxidation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfide oxidation","synonyms":[{"name":"sulphide oxidation","type":"exact"}],"termid":"GO:0019418"}


id: PBO:0119275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, implicated in regulation of proline metabolism (S. cerevisiae), and calcium import (human)","termid":"PBO:0119275"}


id: GO:0045348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of MHC class II biosynthetic process","termid":"GO:0045346"},{"relation_name":"positively_regulates","term_name":"MHC class II biosynthetic process","termid":"GO:0045342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of MHC class II biosynthetic process","synonyms":[{"name":"activation of MHC class II biosynthetic process","type":"narrow"},{"name":"positive regulation of MHC class II anabolism","type":"exact"},{"name":"positive regulation of MHC class II biosynthesis","type":"exact"},{"name":"positive regulation of MHC class II formation","type":"exact"},{"name":"positive regulation of MHC class II synthesis","type":"exact"},{"name":"positive regulation of major histocompatibility complex class II biosynthesis","type":"exact"},{"name":"positive regulation of major histocompatibility complex class II biosynthetic process","type":"exact"},{"name":"stimulation of MHC class II biosynthetic process","type":"narrow"},{"name":"up regulation of MHC class II biosynthetic process","type":"exact"},{"name":"up-regulation of MHC class II biosynthetic process","type":"exact"},{"name":"upregulation of MHC class II biosynthetic process","type":"exact"}],"termid":"GO:0045348"}


id: PBO:0113478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Synthase subunit of trehalose-6-P synthase/phosphatase complex; synthesizes the storage carbohydrate trehalose, which is critically important for survival of long-term desiccation; also found in a monomeric form; expression is induced by the stress response and repressed by the Ras-cAMP pathway; protein abundance increases in response to DNA replication stress and in response to prolonged exposure to boric acid; required for pseudohyphal growth","termid":"PBO:0113478"}


id: GO:0050363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + NAD(P)+ = (indol-3-yl)pyruvate + NH3 + NAD(P)H + H+.","definition_xrefs":["EC:1.4.1.19","MetaCyc:TRYPTOPHAN-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tryptophan dehydrogenase activity","synonyms":[{"name":"L-Trp-dehydrogenase activity","type":"related"},{"name":"L-tryptophan dehydrogenase activity","type":"related"},{"name":"L-tryptophan:NAD(P)+ oxidoreductase (deaminating)","type":"related"},{"name":"NAD(P)+-L-tryptophan dehydrogenase activity","type":"related"},{"name":"TDH","type":"related"},{"name":"TrpDH activity","type":"related"}],"termid":"GO:0050363"}


id: PBO:0091453
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Queuosine Nucleoside Glycosylase","termid":"PBO:0091453"}


id: PBO:0067406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 516, pseudogene","termid":"PBO:0067406"}


id: PBO:0070911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 19","termid":"PBO:0070911"}


id: GO:0072243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric nephron epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. The metanephric nephron epithelium is a tissue that covers the surface of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"is_a","term_name":"metanephric epithelium development","termid":"GO:0072207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron epithelium development","termid":"GO:0072243"}


id: PBO:0091178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methionine-tRNA ligase Msm1","termid":"PBO:0091178"}


id: MONDO:0010014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniometadiaphyseal dysplasia, wormian bone type is an extremely rare craniotubular bone dysplasia syndrome described in fewer than 10 patients to date. Clinical manifestations include macrocephaly, frontal bossing, malar hypoplasia, prominent mandible and dental hypoplasia. Other skeletal anomalies include abnormal bone modeling in tubular bones, multiple wormian bones and deformities of chest, pelvis and elbows. An increased risk of fractures is noted.","definition_xrefs":["Orphanet:85184"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniometadiaphyseal dysplasia, wormian bone type","secondary_identifiers":["MEDGEN:1382152","icd11.foundation:1055011248","UMLS:C4510809","GARD:16737","OMIM:269300","SCTID:278833002"],"synonyms":[{"name":"CRANIOMETADIAPHYSEAL dysplasia","type":"related"},{"name":"CRMDD","type":"related"},{"name":"Schwartz-Lelek syndrome","type":"exact"}],"termid":"MONDO:0010014","xrefs":{"Monarch":{"xref_id":"0010014"}}}


id: MONDO:1010623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Situs inversus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"situs inversus, non-human animal","termid":"MONDO:1010068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus, horse","secondary_identifiers":["OMIA:001102-9796"],"termid":"MONDO:1010623","xrefs":{"Monarch":{"xref_id":"1010623"}}}


id: GO:0039550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces IRF3-dependent gene transcription, by preventing or reducing IRF3 binding to promoter sites.","definition_xrefs":["PMID:21632562"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF3 activity by inhibition of DNA binding (obsolete GO:0039550)","synonyms":[{"name":"inhibition by virus of host IRF3-DNA binding","type":"exact"}],"termid":"GO:0039550"}


id: PBO:0061178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 8-1","termid":"PBO:0061178"}


id: RO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A child nucleus relationship in which the cells are part of a hermaphroditic organism","direct_ancestors":[{"relation_name":"is_a","term_name":"child_nucleus_of","termid":"RO:0002476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"child_nucleus_of_in_hermaphrodite","termid":"RO:0002477"}


id: PBO:0040401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 2","termid":"PBO:0040401"}


id: MONDO:0015698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, primary humoral immunodeficiency of childhood characterized by decreasing serum levels of immunoglobulin G (IgG) as maternal antibodies clear the circulation while serum levels of immunoglobulin A and immunoglobulin M remain normal or are slightly decreased. Diagnosis may be suspected after the age of six months when a child's own synthesis of IgG should accelerate but it must be confirmed retrospectively after normalization of all serum immunoglobulin levels is seen by ages 2-6. This disorder may be caused by inadequate activation of progenitor B cells, defective class-switching or may even represent a maturational variant. Typically, a normal response to protein antigens is found while there is a notably diminished response to viral and bacterial polysaccharide antigens. Clinical presentation may include recurrent infections especially those of the respiratory tract. Despite increased susceptibility to infection in childhood, this disorder is self-limited with minimal implications for a normal life span.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transient hypogammaglobulinemia","termid":"MONDO:0003827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"transient hypogammaglobulinemia of infancy","secondary_identifiers":["MEDGEN:124421","NANDO:2200722","icd11.foundation:1686370790","MedDRA:10044388","NCIT:C27071","SCTID:88714009","UMLS:C0272238","ICD9:279.09","NANDO:1200349","GARD:20112","Orphanet:169139","DOID:624","ICD10CM:D80.7"],"synonyms":[{"name":"THI","type":"exact"},{"name":"transient hypogammaglobulinemia of infancy","type":"exact"}],"termid":"MONDO:0015698","xrefs":{"Monarch":{"xref_id":"0015698"}}}


id: PBO:0059361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 7","termid":"PBO:0059361"}


id: MONDO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality in which the meninges protrude through a defect in the spinal column or the cranium.","definition_xrefs":["NCIT:C105595"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spina bifida","termid":"MONDO:0008449"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"meningocele","secondary_identifiers":["MEDGEN:44356","SCTID:171131006","HP:0002435","DOID:1088","NCIT:C101209","UMLS:C0025299","MESH:D008588","Orphanet:93968"],"synonyms":[{"name":"central nervous system meningocele","type":"exact"},{"name":"meningocele","type":"exact"},{"name":"meningocele (disease)","type":"exact"},{"name":"spinal meningocele","type":"narrow"}],"termid":"MONDO:0001147","xrefs":{"Monarch":{"xref_id":"0001147"}}}


id: PBO:0013840
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidative Stress-induced Reductase","termid":"PBO:0013840"}


id: PBO:0004237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morphogenesis protein Mor2","termid":"PBO:0004237"}


id: PBO:0052952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KTI12 chromatin associated homolog","termid":"PBO:0052952"}


id: PBO:0116616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3142","termid":"PBO:0116616"}


id: FYPO:0000789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1-NA-PP1. Cells stop growing (and may die) at a concentration of 1-NA-PP1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to 1-NA-PP1","synonyms":[{"name":"hypersensitive to 1-NA-PP1","type":"exact"},{"name":"sensitive to 1-NA-PP1 during mitotic cell cycle","type":"related"},{"name":"sensitive to 1-NA-PP1 during vegetative growth","type":"exact"},{"name":"sensitive to 1-tert-butyl-3-naphthalen-1-yl-1H-pyrazolo[3,4-d]pyrimidin-4-amine","type":"exact"},{"name":"sensitive to 4-amino-1-tert-butyl-3-(1'-naphthyl)pyrazolo[3,4-d]pyrimidine","type":"exact"}],"termid":"FYPO:0000789"}


id: GO:0018340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-serine to peptidyl-O-(sn-1-glycerophosphoryl)-L-serine.","definition_xrefs":["RESID:AA0264"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-O-(sn-1-glycerophosphoryl)-L-serine biosynthetic process from peptidyl-serine (obsolete GO:0018340)","synonyms":[{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine anabolism from peptidyl-serine","type":"exact"},{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine formation from peptidyl-serine","type":"exact"},{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine synthesis from peptidyl-serine","type":"exact"}],"termid":"GO:0018340"}


id: PBO:0053632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 678","termid":"PBO:0053632"}


id: GO:0070585
data:
  {"annotated_genes":["SJAG_01640","SJAG_01405","SJAG_01597","SJAG_02397","SJAG_02361","SJAG_05302","SJAG_02398","SJAG_01647","SJAG_01615","SJAG_02524","SJAG_02809","SJAG_04641","SJAG_02077","SJAG_00687","SJAG_01442","SJAG_04336","SJAG_03560","SJAG_04014","SJAG_04072","SJAG_07010","SJAG_01780","SJAG_01684","SJAG_02797","SJAG_05300","SJAG_01951","SJAG_01949","SJAG_02016","SJAG_01120","SJAG_01917","SJAG_03415","SJAG_00569","SJAG_03633","SJAG_03502","SJAG_03416","SJAG_03648","SJAG_03358","SJAG_01879","SJAG_05259","SJAG_01560","SJAG_04218","SJAG_02917","SJAG_04996","SJAG_00373","SJAG_00404","SJAG_04208","SJAG_00196","SJAG_04432","SJAG_03515","SJAG_02034","SJAG_01004","SJAG_00564","SJAG_02355","SJAG_04533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95377,97454,98812],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[77513,77894],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045041"},{"annotations":[94841,103602,117578,107884,105513,103014,97206,115560,117110,110203,88651,107908,99564,112128,106502,107829,100641,99864,99748,89863,91220],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[73818,88978,78201,74326,90716,103243,107885,107909,75951,116596,113527],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[58335,78620,74770,78879,78830],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[107886,98904,76923,98554,112122,110727,110373,70303,59095],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[102526,78536,77173,70191,80300,80531],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[102779,98715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the mitochondrion.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03633":null,"SJAG_03648":null,"SJAG_04014":null,"SJAG_04072":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mitochondrion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in mitochondrion","type":"exact"},{"name":"protein localization in mitochondrion","type":"exact"}],"termid":"GO:0070585","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0160203":null}}


id: MONDO:0021478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the nasopharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"nasopharyngeal neoplasm","termid":"MONDO:0005375"},{"relation_name":"is_a","term_name":"benign neoplasm of pharynx","termid":"MONDO:0021523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of nasopharynx","secondary_identifiers":["SCTID:188800003","UMLS:C0153938","ICD10CM:D10.6","ICD9:210.7","MEDGEN:57574","icd11.foundation:1862070581","NCIT:C3595"],"synonyms":[{"name":"benign nasopharyngeal neoplasm","type":"exact"},{"name":"benign nasopharyngeal tumor","type":"exact"},{"name":"benign nasopharyngeal tumour","type":"exact"},{"name":"benign neoplasm of the nasopharynx","type":"exact"},{"name":"benign tumor of nasopharynx","type":"exact"},{"name":"benign tumor of the nasopharynx","type":"exact"},{"name":"benign tumour of nasopharynx","type":"exact"},{"name":"benign tumour of the nasopharynx","type":"exact"},{"name":"nasopharyngeal neoplasm, benign","type":"exact"},{"name":"nasopharynx benign neoplasm","type":"exact"}],"termid":"MONDO:0021478","xrefs":{"Monarch":{"xref_id":"0021478"}}}


id: MONDO:0012869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the ZBTB18 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 22","secondary_identifiers":["OMIM:612337","DOID:0070052","MESH:C567346"],"synonyms":[{"name":"MRD22","type":"exact"},{"name":"ZBTB18 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"autosomal dominant intellectual disability 22","type":"exact"},{"name":"autosomal dominant mental retardation 22","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 22","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in ZBTB18","type":"exact"},{"name":"chromosome 1Q43-q44 deletion syndrome","type":"related"},{"name":"chromosome 1Qter deletion syndrome","type":"related"},{"name":"intellectual disability, autosomal dominant 22","type":"exact"},{"name":"intellectual disability, autosomal dominant type 22","type":"exact"},{"name":"mental retardation, autosomal dominant 22","type":"related"},{"name":"mental retardation, autosomal dominant type 22","type":"exact"}],"termid":"MONDO:0012869","xrefs":{"Monarch":{"xref_id":"0012869"}}}


id: GO:0035005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 4-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ADP + H+.","definition_xrefs":["RHEA:18373","EC:2.7.1.154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-phosphatidylinositol-4-phosphate 3-kinase activity","secondary_identifiers":["MetaCyc:2.7.1.154-RXN","KEGG_REACTION:R05795","Reactome:R-HSA-1675928","Reactome:R-HSA-1676109","Reactome:R-HSA-1676206","Reactome:R-HSA-8868072"],"synonyms":[{"name":"ATP:1-phosphatidyl-1D-myo-inositol-4-phosphate 3-phosphotransferase activity","type":"related"},{"name":"C2-domain-containing phosphoinositide 3-kinase activity","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class I","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"narrow"},{"name":"phosphatidylinositol 3-kinase, class I, catalyst activity","type":"narrow"},{"name":"phosphatidylinositol-4-phosphate 3-kinase activity","type":"exact"},{"name":"type II phosphoinositide 3-kinase activity","type":"related"}],"termid":"GO:0035005"}


id: GO:0140088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde + NADP+ + H2O = acetate + NADPH + 2 H+.","definition_xrefs":["RHEA:25298","PMID:15659684","PMID:9473035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acetaldehyde dehydrogenase (NADP+) activity","termid":"GO:0140088"}


id: PBO:0071626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 45","termid":"PBO:0071626"}


id: FYPO:0006094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles is abnormal.","definition_xrefs":["GO:0061572","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle organization","termid":"FYPO:0005979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0004803"],"is_obsolete":false,"name":"abnormal actin filament bundle assembly","synonyms":[{"name":"abnormal actin bundling","type":"exact"},{"name":"abnormal actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament bundle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006094"}


id: MONDO:0022648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A specific change in the MTTK gene causes a condition characterized by weakened heart muscle (cardiomyopathy) and hearing loss. Affected individuals may also have myopathy and ataxia. This mutation replaces the DNA building block (nucleotide) guanine with the nucleotide adenine at position 8363 (written as G8363A) within the gene. It is unclear how this alteration in the MTTK gene results in cardiomyopathy, hearing loss, and other symptoms.","definition_xrefs":["GARD:0001108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and deafness due to tRNA lysine gene mutation","secondary_identifiers":["HGNC:7489","GTR:AN0103738","GTR:AN0103739"],"synonyms":[{"name":"cardiomyopathy and deafness due to MTTK gene mutation","type":"related"},{"name":"cardiomyopathy and deafness due to tRNA lysine gene mutation","type":"exact"}],"termid":"MONDO:0022648","xrefs":{"Monarch":{"xref_id":"0022648"}}}


id: PBO:0030286
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_sulfide_level","termid":"PBO:0030286"}


id: PBO:0016619
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quant_gene_ex_copies_per_cell","termid":"PBO:0016619"}


id: GO:0019667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of L-alanine, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"},{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006091","GO:0006520"],"is_obsolete":false,"name":"anaerobic L-alanine catabolic process","synonyms":[{"name":"L-alanine fermentation","type":"exact"}],"termid":"GO:0019667"}


id: PBO:0028997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_amino_acid_import_during_vegetative_growth","termid":"PBO:0028997"}


id: PBO:0056661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28","termid":"PBO:0056661"}


id: PBO:0016572
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RPC40","termid":"PBO:0016572"}


id: PBO:0043993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSGALNACT2 divergent transcript","termid":"PBO:0043993"}


id: PBO:0001265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane translocase Oxa101","termid":"PBO:0001265"}


id: PBO:0045616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 27 (pseudogene)","termid":"PBO:0045616"}


id: MONDO:0004926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lacrimal sac.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute inflammation of lacrimal passage","termid":"MONDO:0004055"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"nasolacrimal duct disorder","termid":"MONDO:0044984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryocystitis","secondary_identifiers":["ICD9:375.30","MEDGEN:3686","SCTID:85777005","UMLS:C0010930","DOID:9938","NCIT:C34521","MESH:D003607","icd11.foundation:1034960983"],"synonyms":[{"name":"Dacryoadenitides","type":"exact"},{"name":"Dacryocystitides","type":"exact"},{"name":"dacryoadenitis","type":"related"},{"name":"inflammation of lacrimal sac","type":"exact"},{"name":"lacrimal sac inflammation","type":"exact"}],"termid":"MONDO:0004926","xrefs":{"Monarch":{"xref_id":"0004926"}}}


id: PBO:0055812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylglycerol acyltransferase 1 pseudogene 1","termid":"PBO:0055812"}


id: MONDO:0007710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive hemifacial atrophy (PHA) is a rare acquired disorder, characterized by unilateral slowly progressive atrophy of the skin and soft tissues of half of the face leading to a sunken appearance. Muscles, cartilage and the underlying bony structures may also be involved.","definition_xrefs":["Orphanet:1214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial hemiatrophy","secondary_identifiers":["OMIM:141300","DOID:1757","MEDGEN:8761","MESH:D005150","SCTID:718224004","GARD:7338","NCIT:C116916","UMLS:C0015458"],"synonyms":[{"name":"HFA","type":"related"},{"name":"PHA","type":"related"},{"name":"Romberg hemi-facial atrophy","type":"related"},{"name":"Romberg syndrome","type":"exact"},{"name":"hemifacial atrophy","type":"exact"},{"name":"hemifacial atrophy, progressive","type":"related"},{"name":"parry-Romberg syndrome","type":"exact"},{"name":"progressive facial hemiatrophy","type":"exact"},{"name":"progressive hemifacial atrophy","type":"exact"}],"termid":"MONDO:0007710","xrefs":{"Monarch":{"xref_id":"0007710"}}}


id: GO:0045973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone secretion","termid":"GO:0007558"},{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"positively_regulates","term_name":"juvenile hormone secretion","termid":"GO:0045443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of juvenile hormone secretion","synonyms":[{"name":"activation of juvenile hormone secretion","type":"narrow"},{"name":"stimulation of juvenile hormone secretion","type":"narrow"},{"name":"up regulation of juvenile hormone secretion","type":"exact"},{"name":"up-regulation of juvenile hormone secretion","type":"exact"},{"name":"upregulation of juvenile hormone secretion","type":"exact"}],"termid":"GO:0045973"}


id: MONDO:0006003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the body of uterus.","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus cancer","secondary_identifiers":["ICD9:182","EFO:0007532","NCIT:C61574","MEDGEN:364875","UMLS:C1883486","DOID:9460","SCTID:371972005"],"synonyms":[{"name":"body of uterus cancer","type":"exact"},{"name":"cancer of body of uterus","type":"exact"},{"name":"cancer of the corpus uteri","type":"exact"},{"name":"corpus uteri cancer","type":"exact"},{"name":"endometrial cancer","type":"related"},{"name":"malignant body of uterus neoplasm","type":"exact"},{"name":"malignant neoplasm of body of uterus","type":"exact"},{"name":"uterine (including endometrial) cancer","type":"exact"},{"name":"uterine corpus cancer","type":"exact"}],"termid":"MONDO:0006003","xrefs":{"Monarch":{"xref_id":"0006003"}}}


id: SO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon or insertion sequence. An element that can insert in a variety of DNA sequences.","direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Transposable_element"],"synonyms":[{"name":"transposable element","type":"exact"},{"name":"transposon","type":"exact"}],"termid":"SO:0000101"}


id: GO:0048533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized floral cell acquires the specialized features of a sporocyte. Sporocytes are the haploid spores of angiosperms. Once formed, they undergo meiotic divisions to form microspores and megaspores.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocyte differentiation","synonyms":[{"name":"sporocyte development","type":"narrow"},{"name":"sporocyte morphogenesis","type":"related"}],"termid":"GO:0048533"}


id: MONDO:0859171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Luo-Schoch-Yamamoto syndrome","secondary_identifiers":["DOID:0070416","OMIM:619460","MEDGEN:1794156","UMLS:C5561946"],"termid":"MONDO:0859171","xrefs":{"Monarch":{"xref_id":"0859171"}}}


id: GO:0097139
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BID and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BID-BCL-2 complex","termid":"GO:0097139"}


id: PBO:0085641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in late endosome to vacuole transport; cytoplasmic and vacuolar membrane protein; required for normal filament maturation during pseudohyphal growth; may function in targeting cargo proteins for degradation; interacts with Vta1p","termid":"PBO:0085641"}


id: PBO:0011526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel subunit/aldo-keto reductase (predicted)","termid":"PBO:0011526"}


id: GO:0106389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an ecdysteroid + ATP = an ecdysteroid 22-phosphate + ADP + H+.","definition_xrefs":["RHEA:67972","PMID:16899460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ecdysteroid 22-kinase activity","secondary_identifiers":["MetaCyc:RXN-14755"],"synonyms":[{"name":"EcKinase","type":"related"}],"termid":"GO:0106389"}


id: MONDO:0021390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the ureter.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"},{"relation_name":"is_a","term_name":"ureter neoplasm","termid":"MONDO:0021111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of ureter","secondary_identifiers":["UMLS:C0346269","icd11.foundation:134277787","SCTID:197821004","ICD9:593.89","MEDGEN:138051","NCIT:C4530"],"synonyms":[{"name":"polyp of the ureter","type":"exact"},{"name":"ureter polyp","type":"exact"},{"name":"ureteral polyp","type":"exact"}],"termid":"MONDO:0021390","xrefs":{"Monarch":{"xref_id":"0021390"}}}


id: GO:0080095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylethanolamine + a sterol = a sterol ester + a lysophosphatidylethanolamine.","definition_xrefs":["PMID:16020547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"phosphatidylethanolamine-sterol O-acyltransferase activity","termid":"GO:0080095"}


id: GO:0097255
data:
  {"annotated_genes":["SJAG_04355","SJAG_03036"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73135,76629],"is_not":false,"summary":null,"term":"GO:0097255"}]},"cv_name":"cellular_component","definition":"A highly conserved protein complex comprised of two ATP-dependent DNA helicases (Rvb1p and Rvb2p in yeast, Pontin52 and Reptin52 in humans), Pih1p in yeast or PIH1D1 in humans, and Tah1 in yeast or RPAP3 in humans. The complex associates with Hsp90 and is thought to have a role in assembly of large protein or protein/nucleic acid complexes. In this role it is involved in multiple processes such as box C/D snoRNP biogenesis, phosphatidylinositol-3 kinase-related protein kinase (PIKK) signaling, RNA polymerase II assembly, and others.","definition_xrefs":["GOC:mcc","PMID:15766533","PMID:21925213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03036":null,"SJAG_04355":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"R2TP complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0097255","terms_by_termid":{"GO:0097255":null}}


id: MONDO:0017521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphalangy","termid":"MONDO:0017455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hyperphalangy, unilateral","secondary_identifiers":["Orphanet:295140","icd11.foundation:1023621052"],"synonyms":[{"name":"hyperphalangy in digits 2-5","type":"exact"},{"name":"supernumerary phalanges, unilateral","type":"exact"},{"name":"supernumerary phalanx, unilateral","type":"exact"}],"termid":"MONDO:0017521","xrefs":{"Monarch":{"xref_id":"0017521"}}}


id: GO:0031549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling via the brain-derived neurotrophic factor receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031548"},{"relation_name":"negatively_regulates","term_name":"brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of brain-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"down regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"downregulation of brain-derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"inhibition of brain-derived neurotrophic factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of BDNF receptor signaling pathway","type":"exact"},{"name":"negative regulation of BDNF receptor signalling pathway","type":"exact"},{"name":"negative regulation of brain-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0031549"}


id: FYPO:0005740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to heat. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription during cellular response to heat","synonyms":[{"name":"normal global transcription during vegetative growth in response to heat stress","type":"exact"},{"name":"normal transcription during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to heat during vegetative growth","type":"exact"},{"name":"normal transcription during cellular response to heat stress","type":"exact"}],"termid":"FYPO:0005740"}


id: GO:1902815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of N,N'-diacetylchitobiose into a cell or organelle.","definition_xrefs":["GOC:am","PMID:9405618","GOC:TermGenie","GO_REF:0000073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"N,N'-diacetylchitobiose import","termid":"GO:1902815"}


id: PBO:0026904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body","termid":"PBO:0026904"}


id: MONDO:0009723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive neurological disease defined by specific neuropathological features associating brainstem and basal ganglia lesions.","definition_xrefs":["Orphanet:506"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"supranuclear oculomotor palsy","termid":"MONDO:0020257"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005244"],"is_obsolete":false,"name":"Leigh syndrome","secondary_identifiers":["MESH:D007888","NCIT:C84814","NORD:1355","OMIM:256000","SCTID:29570005","DOID:3652","NANDO:1200175","NANDO:2200527","UMLS:C2931891","ICD9:330.8","MEDGEN:419518","GARD:6877","MedDRA:10062950","icd11.foundation:672871576"],"synonyms":[{"name":"LS","type":"exact"},{"name":"LSS","type":"exact"},{"name":"Leigh disease","type":"exact"},{"name":"Leigh syndrome","type":"exact"},{"name":"Leigh syndrome due to mitochondrial Complex 1 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 2 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 3 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 4 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 5 deficiency","type":"related"},{"name":"Leigh syndrome spectrum","type":"exact"},{"name":"Leigh's disease","type":"exact"},{"name":"Leigh's necrotizing encephalopathy","type":"related"},{"name":"SNE","type":"related"},{"name":"infantile necrotizing encephalomyelopathy","type":"exact"},{"name":"infantile subacute necrotizing encephalopathy","type":"exact"},{"name":"juvenile subacute necrotizing encephalomyelopathy","type":"exact"},{"name":"necrotizing encephalopathy, infantile Subacute, of Leigh","type":"related"},{"name":"subacute necrotizing encephalomyelopathy","type":"related"},{"name":"subacute necrotizing encephalopathy","type":"related"}],"termid":"MONDO:0009723","xrefs":{"Monarch":{"xref_id":"0009723"}}}


id: MONDO:0006568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kimura disease (obsolete MONDO:0006568)","termid":"MONDO:0006568","xrefs":{"Monarch":{"xref_id":"0006568"}}}


id: SO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that affects one of several possible alleles at that location, such as the major histocompatibility complex (MHC) genes.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_frequency","termid":"SO:0001763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_variant","synonyms":[{"name":"polymorphic variant","type":"exact"}],"termid":"SO:0001766"}


id: PBO:0008726
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previusly annotated as SPBTRNAASP.03","termid":"PBO:0008726"}


id: MONDO:0006399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rhabdoid tumor of the kidney (obsolete MONDO:0006399)","termid":"MONDO:0006399","xrefs":{"Monarch":{"xref_id":"0006399"}}}


id: PBO:0067511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 652, pseudogene","termid":"PBO:0067511"}


id: MONDO:0016321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary interstitial glycogenosis (PIG) is a rare non-lethal pediatric form of interstitial lung disease (ILD).","definition_xrefs":["Orphanet:217557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary interstitial glycogenosis","secondary_identifiers":["SCTID:707551007","UMLS:C3161106","ICD10CM:J84.842","MEDGEN:838075","GARD:20516","icd11.foundation:1386580655"],"synonyms":[{"name":"PIG","type":"exact"},{"name":"infantile cellular interstitial pneumonitis","type":"exact"},{"name":"pig","type":"exact"}],"termid":"MONDO:0016321","xrefs":{"Monarch":{"xref_id":"0016321"}}}


id: PR:O60070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A set1/Ash2 histone methyltransferase complex subunit ASH2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03834","PANTHER:PTHR10598:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component ash2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.08c","secondary_identifiers":["UniProtKB:O60070"],"synonyms":[{"name":"COMPASS component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Lid2C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ASH2L","type":"exact"},{"name":"complex proteins associated with set1 protein ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lid2 complex component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60070"}


id: GO:0021693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellar Purkinje cell layer. This process pertains to the physical shaping of a rudimentary structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:jid","GOC:cls","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer morphogenesis","termid":"GO:0021692"},{"relation_name":"part_of","term_name":"cerebellar cortex structural organization","termid":"GO:0021698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer structural organization","synonyms":[{"name":"cerebellar Purkinje cell layer structural organisation","type":"exact"}],"termid":"GO:0021693"}


id: MONDO:0006748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of epilepsy characterized by continuous focal jerking of a body part over a period of hours, days, or even years without spreading to other body regions. Contractions may be aggravated by movement and are reduced, but not abolished during sleep. electroencephalography demonstrates epileptiform (spike and wave) discharges over the hemisphere opposite to the affected limb in most instances. The repetitive movements may originate from the cerebral cortex or from subcortical structures (e.g., brain stem; basal ganglia). This condition is associated with Russian Spring and Summer encephalitis; Rasmussen syndrome; multiple sclerosis; diabetes mellitus; brain neoplasms; and cerebrovascular disorders.","definition_xrefs":["MESH:D017036","PMID:8800935","PMID:7681771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsia partialis continua","secondary_identifiers":["SCTID:241006","MEDGEN:39303","UMLS:C0085543","EFO:1000924","ICD9:345.70","MedDRA:10015034","ICD9:345.7","icd11.foundation:669338526"],"termid":"MONDO:0006748","xrefs":{"Monarch":{"xref_id":"0006748"}}}


id: PBO:0061424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NQO1 divergent transcript","termid":"PBO:0061424"}


id: MOD:00038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.","definition_xrefs":["PubMed:2400108","RESID:AA0029","ChEBI:16889","PubMed:3734192","PubMed:4343807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-proline","synonyms":[{"name":"(2S,3S)-3-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"3-hydroxy-L-proline","type":"exact"},{"name":"3-hydroxylated L-proline","type":"exact"},{"name":"3-trans-hydroxy-L-proline","type":"exact"},{"name":"3HyPro","type":"exact"},{"name":"L-threo-3-hydroxyproline","type":"exact"},{"name":"MOD_RES 3-hydroxyproline","type":"exact"},{"name":"beta-hydroxypyrrolidine-alpha-carboxylic acid","type":"exact"}],"termid":"MOD:00038"}


id: GO:0016782
data:
  {"annotated_genes":["SJAG_03896","SJAG_00186","SJAG_00358","SJAG_03932","SJAG_01302","SJAG_03701","SJAG_04113","SJAG_01239","SJAG_02769","SJAG_02985","SJAG_01935","SJAG_03553"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016784"},{"annotations":[77126,75890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008775"},{"annotations":[79676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004076"},{"annotations":[79072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031071"},{"annotations":[118188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036455"},{"annotations":[75469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016992"},{"annotations":[91766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008260"},{"annotations":[74552,75682,70106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004792"},{"annotations":[60825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061708"},{"annotations":[108738,94593,106191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0103016"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a sulfur-containing group from one compound (donor) to another (acceptor).","definition_xrefs":["EC:2.8.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00358":null,"SJAG_01239":null,"SJAG_01302":null,"SJAG_01935":null,"SJAG_02769":null,"SJAG_02985":null,"SJAG_03553":null,"SJAG_03701":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"transferase activity, transferring sulphur-containing groups","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016782","terms_by_termid":{"GO:0004076":null,"GO:0004792":null,"GO:0008260":null,"GO:0008775":null,"GO:0016784":null,"GO:0016992":null,"GO:0031071":null,"GO:0036455":null,"GO:0061708":null,"GO:0103016":null}}


id: PBO:0114217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mlo3","termid":"PBO:0114217"}


id: GO:0009399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nitrogen is taken from its relatively inert molecular form (N2) in the atmosphere and converted into ammonium, which is more biologically available.","definition_xrefs":["PMID:32796519","PMID:36344435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"},{"relation_name":"is_a","term_name":"ammonium ion metabolic process","termid":"GO:0097164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0008150","GO:0071941"],"is_obsolete":false,"name":"nitrogen fixation","secondary_identifiers":["Wikipedia:Nitrogen_fixation","MetaCyc:N2FIX-PWY"],"termid":"GO:0009399"}


id: PBO:0070471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 6","termid":"PBO:0070471"}


id: MONDO:0018668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scedosporiosis","secondary_identifiers":["Orphanet:449280","icd11.foundation:807637046","MEDGEN:1713603","UMLS:C1142170","MESH:C000656924","GARD:21880"],"termid":"MONDO:0018668","xrefs":{"Monarch":{"xref_id":"0018668"}}}


id: PBO:0068666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 47, pseudogene","termid":"PBO:0068666"}


id: MONDO:0002560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete junctional epidermolysis bullosa (obsolete MONDO:0002560)","termid":"MONDO:0002560","xrefs":{"Monarch":{"xref_id":"0002560"}}}


id: PBO:0075707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP2 antisense RNA 1","termid":"PBO:0075707"}


id: PBO:0087693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins; similar to and partially functionally redundant with Ost3p","termid":"PBO:0087693"}


id: PBO:0031234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_or_maintenance_of_actin_cytoskeleton_polarity","termid":"PBO:0031234"}


id: GO:2000685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to X-ray.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to X-ray","termid":"GO:2000683"},{"relation_name":"positively_regulates","term_name":"cellular response to X-ray","termid":"GO:0071481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to X-ray","synonyms":[{"name":"positive regulation of cellular response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:2000685"}


id: GO:0007250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues.","definition_xrefs":["PMID:12773372","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"},{"relation_name":"part_of","term_name":"non-canonical NF-kappaB signal transduction","termid":"GO:0038061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"activation of NF-kappaB-inducing kinase activity","synonyms":[{"name":"activation of NIK activity","type":"exact"},{"name":"positive regulation of NF-kappaB-inducing kinase activity","type":"broad"}],"termid":"GO:0007250"}


id: PBO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 12 (pseudogene)","termid":"PBO:0045601"}


id: GO:1990055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: L-phenylalanine + O2 + H2O -> phenylacetaldehyde + ammonia + hydrogen peroxide + CO2.","definition_xrefs":["MetaCyc:RXN-8990","PMID:23204519","PMID:16766535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylacetaldehyde synthase activity","secondary_identifiers":["EC:4.1.1.109","RHEA:55532"],"synonyms":[{"name":"aromatic aldehyde synthase","type":"broad"}],"termid":"GO:1990055"}


id: PBO:0062035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 4","termid":"PBO:0062035"}


id: PR:Q9USJ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USJ2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein got1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.02c","synonyms":[{"name":"Golgi transport protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC4B3.02c","type":"exact"}],"termid":"PR:Q9USJ2"}


id: PBO:0080829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yes1 associated transcriptional regulator","termid":"PBO:0080829"}


id: MONDO:1010811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, dog","secondary_identifiers":["OMIA:000810-9615"],"termid":"MONDO:1010811","xrefs":{"Monarch":{"xref_id":"1010811"}}}


id: PATO:0001725
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male receptivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male receptivity","termid":"PATO:0001721"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased male receptivity","synonyms":[{"name":"high male receptivity","type":"exact"}],"termid":"PATO:0001725"}


id: MONDO:0019837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atrial appendage anomaly (obsolete MONDO:0019837)","secondary_identifiers":["Orphanet:95510"],"synonyms":[{"name":"atrial auricle anomaly","type":"exact"}],"termid":"MONDO:0019837","xrefs":{"Monarch":{"xref_id":"0019837"}}}


id: PR:O43008
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- crs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific cyclin crs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.09c","synonyms":[{"name":"Spom972h-crs1","type":"exact"},{"name":"cyclin-like protein regulated via splicing 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 17 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43008"}


id: FYPO:0007302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect when the cell is subject to heat shock. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah","PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"protein absent from cell during heat shock","synonyms":[{"name":"protein absent from cell during heat shock during mitotic cell cycle","type":"related"},{"name":"protein absent from cell during heat shock during vegetative growth","type":"exact"},{"name":"undetectable cellular protein level during heat shock","type":"exact"}],"termid":"FYPO:0007302"}


id: MONDO:1012819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypotrichosis that occurs in pigs due to a mutation in the HR gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypotrichosis, non-human animal","termid":"MONDO:1012977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis, HR-related, pig","secondary_identifiers":["OMIA:002229-9823"],"termid":"MONDO:1012819","xrefs":{"Monarch":{"xref_id":"1012819"}}}


id: PBO:0085357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphopantetheine:protein transferase (PPTase); activates mitochondrial acyl carrier protein (Acp1p) by phosphopantetheinylation","termid":"PBO:0085357"}


id: PBO:0044149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTCF divergent transcript","termid":"PBO:0044149"}


id: PBO:0082532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-3 has a paralog, ASP3-1, that arose from a segmental duplication","termid":"PBO:0082532"}


id: GO:1902691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a respiratory basal cell.","definition_xrefs":["GOC:TermGenie","MP:0011114","PMID:17909629","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory basal cell differentiation","synonyms":[{"name":"airway basal cell differentiation","type":"exact"}],"termid":"GO:1902691"}


id: MONDO:0015853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete deficient breast volume or number (obsolete MONDO:0015853)","secondary_identifiers":["Orphanet:180173"],"termid":"MONDO:0015853","xrefs":{"Monarch":{"xref_id":"0015853"}}}


id: PBO:0110805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription repressor Scr1, glucose sensing","termid":"PBO:0110805"}


id: MONDO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"neurenteric cyst","secondary_identifiers":["UMLS:C0027806","GARD:20975","icd11.foundation:172158971","MEDGEN:14343","Orphanet:268865"],"termid":"MONDO:0017087","xrefs":{"Monarch":{"xref_id":"0017087"}}}


id: PBO:0091052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate homeostasis protein","termid":"PBO:0091052"}


id: MONDO:0800335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemiplegic migraine","termid":"MONDO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine, familial hemiplegic, 4","secondary_identifiers":["MEDGEN:334830","UMLS:C1843766"],"synonyms":[{"name":"FHM4","type":"exact"}],"termid":"MONDO:0800335","xrefs":{"Monarch":{"xref_id":"0800335"}}}


id: GO:0004489
data:
  {"annotated_genes":["SJAG_03712","SJAG_01466"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106312"},{"annotations":[96967,98731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106313"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydrofolate + NAD(P)+ = 5,10-methylenetetrahydrofolate + NAD(P)H + H+.","definition_xrefs":["PMID:26872964","EC:1.5.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (NAD(P)H) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01224","GO:0008702","MetaCyc:1.5.1.20-RXN","KEGG_REACTION:R07168","Reactome:R-HSA-200676"],"synonyms":[{"name":"5,10-CH(2)-H(4)folate reductase activity","type":"related"},{"name":"5,10-CH2-H4folate reductase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"5,10-methylenetetrahydrofolic acid reductase activity","type":"broad"},{"name":"5,10-methylenetetrahydropteroylglutamate reductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"related"},{"name":"5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"related"},{"name":"MTHFR activity","type":"broad"},{"name":"MetF","type":"related"},{"name":"N(5),N(10)-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"N(5,10)-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"N5,10-methylenetetrahydrofolate reductase activity","type":"related"},{"name":"N5,N10-methylenetetrahydrofolate reductase activity","type":"related"},{"name":"methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"related"},{"name":"methylenetetrahydrofolate reductase (NADPH2)","type":"related"},{"name":"methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"methylenetetrahydrofolic acid reductase activity","type":"broad"}],"termid":"GO:0004489","terms_by_termid":{"GO:0106312":null,"GO:0106313":null}}


id: PBO:0001571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3-phosphatase, myotubularin family (predicted)","termid":"PBO:0001571"}


id: PBO:0054973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2387","termid":"PBO:0054973"}


id: PBO:0027506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-h-_specific_sterility","termid":"PBO:0027506"}


id: GO:0046465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dolichyl diphosphate, a diphosphorylated dolichol derivative. In eukaryotes, these function as carriers of mono- and oligosaccharide residues in the glycosylation of lipids and proteins within intracellular membranes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"dolichyl diphosphate metabolic process","synonyms":[{"name":"dolichyl diphosphate metabolism","type":"exact"}],"termid":"GO:0046465"}


id: FYPO:0002746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-valine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular valine level","synonyms":[{"name":"normal cellular L-valine level","type":"exact"},{"name":"normal cellular valine level during mitotic cell cycle","type":"related"},{"name":"normal cellular valine level during vegetative growth","type":"exact"},{"name":"normal level of valine in cell","type":"exact"}],"termid":"FYPO:0002746"}


id: PBO:0074607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 12","termid":"PBO:0074607"}


id: GO:0005169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin TRKB receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin TRK receptor binding","termid":"GO:0005167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"neurotrophin TRKB receptor binding","synonyms":[{"name":"neurotrophin TRKB receptor ligand","type":"narrow"}],"termid":"GO:0005169"}


id: FYECO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Nitrogen was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen absent","synonyms":[{"name":"-N","type":"exact"},{"name":"nitrogen excluded","type":"related"},{"name":"nitrogen free","type":"exact"},{"name":"nitrogen starvation","type":"related"}],"termid":"FYECO:0000127"}


id: PBO:0039215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C6, pseudogene","termid":"PBO:0039215"}


id: MONDO:0003314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of rare neoplasms that arise from the vagina. It includes low grade endometrioid stromal sarcoma and undifferentiated sarcoma.","definition_xrefs":["NCIT:C40269"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vaginal cancer","termid":"MONDO:0001402"},{"relation_name":"is_a","term_name":"vaginal neoplasm","termid":"MONDO:0021050"},{"relation_name":"is_a","term_name":"endometrioid stromal and related neoplasms","termid":"MONDO:0037742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrioid stromal and related neoplasms of the vagina","secondary_identifiers":["MEDGEN:927117","DOID:5171","UMLS:C4289585"],"synonyms":[{"name":"endometrioid stromal and related neoplasms of the vagina","type":"exact"},{"name":"endometrioid stromal and related neoplasms of vagina","type":"exact"},{"name":"endometrioid stromal and related tumors of the vagina","type":"exact"},{"name":"endometrioid stromal and related tumours of the vagina","type":"exact"},{"name":"vagina endometrioid stromal and related neoplasms","type":"exact"},{"name":"vaginal endometrial stromal tumor","type":"related"},{"name":"vaginal endometrial stromal tumour","type":"related"}],"termid":"MONDO:0003314","xrefs":{"Monarch":{"xref_id":"0003314"}}}


id: PBO:0050266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 44","termid":"PBO:0050266"}


id: PBO:0053624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 667","termid":"PBO:0053624"}


id: PBO:0116604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer associated lncRNA targeting TOP2A","termid":"PBO:0116604"}


id: PBO:0027112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall_organization","termid":"PBO:0027112"}


id: PBO:0087876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; involved in activation of the GAL genes in response to galactose; forms a complex with Gal80p to relieve Gal80p inhibition of Gal4p; binds galactose and ATP but does not have galactokinase activity; GAL3 has a paralog, GAL1, that arose from the whole genome duplication","termid":"PBO:0087876"}


id: MONDO:0100197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus. There are four serotypes which cause respiratory illnesses in children and adults.","definition_xrefs":["SCTID:12188008","PMID:27486735","MONDO:patterns/infectious_disease_by_agent","OMOP:4008269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Paramyxoviridae infectious disease","termid":"MONDO:0005896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza infectious disease","synonyms":[{"name":"HPIV infectious disorder","type":"exact"},{"name":"human parainfluenza virus infectious disorder","type":"related"},{"name":"human parainfluenza viruses infectious disorder","type":"related"},{"name":"parainfluenza (disorder)","type":"exact"},{"name":"parainfluenza infectious disorder","type":"exact"}],"termid":"MONDO:0100197","xrefs":{"Monarch":{"xref_id":"0100197"}}}


id: MONDO:0004803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"collagenopathy","termid":"MONDO:0004603"},{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"disseminated eosinophilic collagen disease","secondary_identifiers":["UMLS:C0263662","SCTID:423486005","MEDGEN:538043","ICD9:710.8","DOID:9499"],"termid":"MONDO:0004803","xrefs":{"Monarch":{"xref_id":"0004803"}}}


id: PBO:0116860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome-releasing factor 2, mitochondrial Gfm2/Mef2","termid":"PBO:0116860"}


id: PR:000085718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-36. Example: UniProtKB:P09988, 2-136, Lys-37, MOD:00663.","definition_xrefs":["PRO:DAN","PMID:37459529","PomBase:VW"],"direct_ancestors":[{"relation_name":"has_part","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Me(K36)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"PRO_0000221366, Lys-37, MOD:00663","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/K36Me","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-37, MOD:00663","type":"related"},{"name":"hht2/Me(K36)","type":"exact"}],"termid":"PR:000085718"}


id: MONDO:0015590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classic paraneoplastic limbic encephalitis is a rare neuroimmunological disorder characterized by the sudden onset of seizures, progressive memory impairment (which may develop into dementia) and psychiatric manifestations (e.g. depression, personality changes, loss of social inhibition) associated with cancer (most commonly small-cell carcinoma of the lung) in the absence of tumor cell invasion of the nervous system. Other reported features include ataxia, dystonia, paresthesia, tremors, paranoid ideation, and hallucinations. The presence of antibodies that act on neuronal antigens (such as anti-Hu, anti-Ma2, anti-amphiphysin) are typically observed.","definition_xrefs":["Orphanet:163898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraneoplastic limbic encephalitis","termid":"MONDO:0015589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classic paraneoplastic limbic encephalitis","synonyms":[{"name":"classic paraneoplastic limbic encephalitis, with or without intracellular antigens","type":"exact"}],"termid":"MONDO:0015590","xrefs":{"Monarch":{"xref_id":"0015590"}}}


id: PBO:0030420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sterol_binding","termid":"PBO:0030420"}


id: FYPO:0007512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure chromosome III is abnormal.","definition_xrefs":["PomBase:mah","PomBase:jh","PMID:17690116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000654","FYPO:0000652","FYPO:0005447","FYPO:0001320","FYPO:0000661","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"abnormal chromosome III morphology","synonyms":[{"name":"abnormal chromosome III mobility","type":"related"},{"name":"abnormal chromosome III morphology during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome III morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0007512"}


id: PBO:0063264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 10","termid":"PBO:0063264"}


id: PBO:0045061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG2 antisense RNA 1","termid":"PBO:0045061"}


id: PBO:0090271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6","termid":"PBO:0090271"}


id: PBO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_3'-5'-exoribonuclease_activity","termid":"PBO:0030177"}


id: PBO:0085110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear type II J heat shock protein of the E. coli dnaJ family; overexpression stabilizes amino acid permeases; contains a leucine zipper-like motif, binds to non-native substrates for presentation to Ssa3p, may function during protein translocation, assembly and disassembly; localizes to the cytosol and plasma membrane, while a GFP fusion protein localizes to the nucleus","termid":"PBO:0085110"}


id: PBO:0048029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 1","termid":"PBO:0048029"}


id: GO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine = D-serine.","definition_xrefs":["RHEA:10980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"serine racemase activity","secondary_identifiers":["EC:5.1.1.18","MetaCyc:5.1.1.18-RXN","Reactome:R-HSA-9014766"],"termid":"GO:0030378"}


id: PBO:0090541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase/chaperone Afg1","termid":"PBO:0090541"}


id: PR:Q9USZ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial fission 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13247:SF0","OMA:SCHPO02985","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondria fission 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.01","secondary_identifiers":["UniProtKB:Q9USZ8"],"synonyms":[{"name":"Spom972h-FIS1","type":"exact"}],"termid":"PR:Q9USZ8"}


id: PBO:0071292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 15","termid":"PBO:0071292"}


id: PBO:0063134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate androgen-regulated transcript 1","termid":"PBO:0063134"}


id: PBO:0041286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 9B","termid":"PBO:0041286"}


id: FYPO:0004858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing Congo Red.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on Congo Red","synonyms":[{"name":"normal cell population growth in presence of Congo Red","type":"exact"},{"name":"normal cell population growth on Congo Red","type":"exact"},{"name":"normal cellular response to Congo Red","type":"related"},{"name":"normal vegetative cell population growth on Congo Red","type":"exact"}],"termid":"FYPO:0004858"}


id: GO:0071582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of zinc ions (Zn2+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"regulation of zinc ion transport","termid":"GO:0071579"},{"relation_name":"negatively_regulates","term_name":"zinc ion transport","termid":"GO:0006829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of zinc ion transport","termid":"GO:0071582"}


id: GO:0030181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exchange diffusion sodium and calcium ions in which influx of sodium ions to the cytosol drives the efflux of calcium ions from the cell.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:calcium exchange (obsolete GO:0030181)","synonyms":[{"name":"sodium:calcium exchange","type":"exact"}],"termid":"GO:0030181"}


id: GO:0010263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tricyclic triterpenoid compounds, terpenoids with 6 isoprene units and 3 carbon rings.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricyclic triterpenoid metabolic process","termid":"GO:0010683"},{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tricyclic triterpenoid biosynthetic process","synonyms":[{"name":"tricyclic triterpenoid anabolism","type":"exact"},{"name":"tricyclic triterpenoid biosynthesis","type":"exact"},{"name":"tricyclic triterpenoid formation","type":"exact"},{"name":"tricyclic triterpenoid synthesis","type":"exact"}],"termid":"GO:0010263"}


id: PBO:0084149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity maltose transporter (alpha-glucoside transporter); inducible; encoded in the MAL1 complex locus; broad substrate specificity that includes maltotriose; required for isomaltose utilization","termid":"PBO:0084149"}


id: PBO:0072313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 10","termid":"PBO:0072313"}


id: MOD:00704
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a double bond by removing a molecule of water from a residue.","definition_xrefs":["Unimod:23","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrated residue","synonyms":[{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"}],"termid":"MOD:00704"}


id: GO:0051871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dihydrofolic acid, a folic acid in which the bicyclic pteridine structure is in the dihydro, partially reduced form; they are intermediates in folate metabolism and are reduced to their tetrahydro, reduced forms.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dihydrofolic acid binding","synonyms":[{"name":"DHF binding","type":"related"},{"name":"dihydrofolate binding","type":"related"}],"termid":"GO:0051871"}


id: PBO:0080836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1","termid":"PBO:0080836"}


id: PBO:0088573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex cyclin subunit Srb11","termid":"PBO:0088573"}


id: GO:0075205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont. The cAMP-mediated signal transduction is defined as a series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075205)","synonyms":[{"name":"modulation by host of symbiont cAMP-mediated signaling","type":"related"},{"name":"modulation by host of symbiont cAMP-mediated signalling","type":"exact"},{"name":"regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075205"}


id: PBO:0089989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII cargo receptor subunit Sec23b","termid":"PBO:0089989"}


id: GO:0002247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to removal of necrotic debris that contribute to an inflammatory response.","definition_xrefs":["ISBN:0721601871","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"wound healing involved in inflammatory response","termid":"GO:0002246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of damaged tissue involved in inflammatory response wound healing","synonyms":[{"name":"clearance of damaged tissue during inflammatory response","type":"related"}],"termid":"GO:0002247"}


id: PBO:0003072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-1,6-bisphosphatase Fbp1","termid":"PBO:0003072"}


id: GO:0021978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that creates areas within the forebrain that will direct the behavior of cell migration in differentiation as the telencephalon develops.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:cls","GO_REF:0000021","GOC:dph","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"},{"relation_name":"part_of","term_name":"forebrain regionalization","termid":"GO:0021871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon regionalization","termid":"GO:0021978"}


id: SO:0001619
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant of a non coding RNA gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_coding_transcript_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:ncRNA","type":"narrow"},{"name":"Jannovar:non_coding_transcript_variant","type":"exact"},{"name":"VEP:non_coding_transcript_variant","type":"exact"},{"name":"nc transcript variant","type":"exact"},{"name":"non coding transcript variant","type":"exact"},{"name":"within_non_coding_gene","type":"exact"}],"termid":"SO:0001619"}


id: GO:0007537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The inactivation of recombination at sequences around a mating type donor locus, with the consequence that the other donor is the only one available for mating type switching; exemplified by the HML locus and surrounding sequences on Chromosome III in Saccharomyces cerevisiae.","definition_xrefs":["PMID:9928492","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"donor selection","termid":"GO:0007535"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"inactivation of recombination (HML)","termid":"GO:0007537"}


id: MONDO:0021059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any disease or disorder affecting the head and/or neck region.","gene_count":0,"genotype_count":0,"name":"obsolete head or neck disorder/disorder (obsolete MONDO:0021059)","secondary_identifiers":["NCIT:C27571"],"synonyms":[{"name":"craniocervical region disease","type":"exact"},{"name":"craniocervical region disease or disorder","type":"exact"},{"name":"disease of craniocervical region","type":"exact"},{"name":"disease or disorder of craniocervical region","type":"exact"},{"name":"disorder of craniocervical region","type":"exact"},{"name":"head and neck disorder","type":"exact"},{"name":"head or neck disorder","type":"exact"}],"termid":"MONDO:0021059","xrefs":{"Monarch":{"xref_id":"0021059"}}}


id: PBO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.5","termid":"PBO:0000100"}


id: PBO:0113055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of ESCRT-II complex; contains GLUE (GRAM Like Ubiquitin binding in EAP45) domain which is involved in interactions with ESCRT-I and ubiquitin-dependent sorting of proteins into endosome; plays role in lager yeast flocculation under brewing conditions; plays role in formation of mutant huntingtin (Htt) aggregates in yeast","termid":"PBO:0113055"}


id: GO:0034627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan or aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD+, or the reduced form, NADH.","definition_xrefs":["PMID:17161604","GOC:imk"],"gene_count":0,"genotype_count":0,"name":"obsolete 'de novo' NAD biosynthetic process (obsolete GO:0034627)","synonyms":[{"name":"de novo NAD biosynthetic process","type":"related"}],"termid":"GO:0034627"}


id: MONDO:1011725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin 7S deficiency, non-human animal","secondary_identifiers":["OMIA:000551"],"termid":"MONDO:1011725","xrefs":{"Monarch":{"xref_id":"1011725"}}}


id: PBO:0036060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein-protein_interaction","termid":"PBO:0036060"}


id: GO:0098023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The basal end of the virus tail, which is used by the virus to attach to the host cell.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, tip","synonyms":[{"name":"bacteriophage tail tip","type":"narrow"}],"termid":"GO:0098023"}


id: PBO:0030457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nickel_import","termid":"PBO:0030457"}


id: MONDO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the liver.","definition_xrefs":["NCIT:C4438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver sarcoma","termid":"MONDO:0002397"},{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver angiosarcoma","secondary_identifiers":["SCTID:109844006","UMLS:C0345907","GARD:5813","MEDGEN:138027","ICDO:9124/3","DOID:268","ONCOTREE:LIAS","ICD10CM:C22.3"],"synonyms":[{"name":"Lias","type":"related"},{"name":"angiosarcoma (disease) of liver","type":"exact"},{"name":"angiosarcoma of liver","type":"exact"},{"name":"angiosarcoma of the liver","type":"exact"},{"name":"hemangiosarcoma of liver","type":"exact"},{"name":"hemangiosarcoma of the liver","type":"exact"},{"name":"hepatic angiosarcoma","type":"exact"},{"name":"hepatic hemangiosarcoma","type":"exact"},{"name":"liver angiosarcoma","type":"exact"},{"name":"liver angiosarcoma (disease)","type":"exact"},{"name":"liver hemangiosarcoma","type":"exact"},{"name":"primary angiosarcoma of liver","type":"exact"},{"name":"primary angiosarcoma of the liver","type":"exact"}],"termid":"MONDO:0002387","xrefs":{"Monarch":{"xref_id":"0002387"}}}


id: GO:0070240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of activated T cell autonomous cell death.","definition_xrefs":["ISBN:0781765196","GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated T cell autonomous cell death","termid":"GO:0070239"},{"relation_name":"negatively_regulates","term_name":"activated T cell autonomous cell death","termid":"GO:0070238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated T cell autonomous cell death","synonyms":[{"name":"down regulation of activated T cell autonomous cell death","type":"exact"},{"name":"down-regulation of activated T cell autonomous cell death","type":"exact"},{"name":"downregulation of activated T cell autonomous cell death","type":"exact"},{"name":"inhibition of activated T cell autonomous cell death","type":"narrow"},{"name":"negative regulation of ACAD","type":"broad"},{"name":"negative regulation of activated T cell apoptosis","type":"broad"},{"name":"negative regulation of activated T lymphocyte autonomous cell death","type":"exact"},{"name":"negative regulation of activated T-cell autonomous cell death","type":"exact"},{"name":"negative regulation of activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"negative regulation of activated cell autonomous cell death","type":"broad"}],"termid":"GO:0070240"}


id: PBO:0075611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOPL divergent transcript","termid":"PBO:0075611"}


id: MONDO:0971063
data:
  {"annotated_genes":["SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"}]},"cv_name":"mondo","definition":"A rare neurometabolic disorder characterized by childhood-onset dystonia that shows a dramatic and sustained response to low doses of levodopa (L-dopa) and that may be associated with parkinsonism at an older age.","definition_xrefs":["Orphanet:98808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopa-responsive dystonia","termid":"MONDO:0016812"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0003441","MONDO:0005066"],"is_obsolete":false,"name":"autosomal dominant dopa-responsive dystonia","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0971063","terms_by_termid":{"MONDO:0007495":null},"xrefs":{"Monarch":{"xref_id":"0971063"}}}


id: PBO:0003572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U14","termid":"PBO:0003572"}


id: GO:0005079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to protein kinase A and anchors it to a particular subcellular location.","definition_xrefs":["PMID:10354567"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase A anchoring activity (obsolete GO:0005079)","synonyms":[{"name":"A-kinase anchor protein activity","type":"exact"},{"name":"AKAP activity","type":"exact"},{"name":"protein kinase A anchoring activity","type":"exact"}],"termid":"GO:0005079"}


id: GO:0043709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a solid substrate, via cell adhesion molecules, during the formation of a biofilm composed of microorganisms of the same species.","definition_xrefs":["GOC:jl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in biofilm formation","termid":"GO:0043708"},{"relation_name":"part_of","term_name":"single-species submerged biofilm formation","termid":"GO:0090609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:0043709"}


id: GO:0016212
data:
  {"annotated_genes":["SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74054],"is_not":false,"summary":null,"term":"GO:0016212"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-kynurenine = H2O + kynurenate + L-glutamate. The product 4-(2-aminophenyl)-2,4-dioxobutanoate is converted into kynurenate by a spontaneous reaction. Also acts on 3-hydroxykynurenine to form xanthurenate.","definition_xrefs":["EC:2.6.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"kynurenine-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-901097","Reactome:R-HSA-893583","Reactome:R-HSA-893596"],"synonyms":[{"name":"L-kynurenine aminotransferase activity","type":"related"},{"name":"L-kynurenine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"kynurenine 2-oxoglutarate transaminase activity","type":"related"},{"name":"kynurenine aminotransferase activity","type":"broad"},{"name":"kynurenine transaminase (cyclizing)","type":"related"},{"name":"kynurenine--oxoglutarate aminotransferase activity","type":"related"},{"name":"kynurenine-oxoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0016212","terms_by_termid":{"GO:0016212":null}}


id: GO:0090134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells from one site to another that contributes to the migration of mesendodermal tissue.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"mesendoderm migration","termid":"GO:0090133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}


id: PBO:0072522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 51","termid":"PBO:0072522"}


id: MONDO:0030134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculopharyngodistal myopathy","termid":"MONDO:0025193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngodistal myopathy 2","secondary_identifiers":["MEDGEN:1718769","OMIM:618940","UMLS:C5394548","DOID:0081298","GARD:16397"],"synonyms":[{"name":"OCULOPHARYNGODISTAL MYOPATHY 2","type":"exact"},{"name":"OPDM2","type":"exact"},{"name":"oculopharyngodistal myopathy 2","type":"exact"}],"termid":"MONDO:0030134","xrefs":{"Monarch":{"xref_id":"0030134"}}}


id: GO:0044072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or stops progression through the host cell cycle.","definition_xrefs":["PMID:10946289","PMID:19308257"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host cell cycle progression (obsolete GO:0044072)","synonyms":[{"name":"cell cycle arrest in host","type":"related"},{"name":"negative regulation by symbiont of host cell cycle","type":"related"},{"name":"suppression of host cell cycle progression","type":"exact"}],"termid":"GO:0044072"}


id: MOD:01634
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-aspartic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid removal","termid":"MOD:01634"}


id: FYPO:0003518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynine (N(alpha),N(alpha),N(alpha)-trimethyl-L-histidine) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular hercynine level during vegetative growth","synonyms":[{"name":"increased cellular N(alpha),N(alpha),N(alpha)-trimethyl-L-histidine level","type":"exact"},{"name":"increased cellular hercynine level during mitotic cell cycle","type":"related"},{"name":"increased cellular trimethyl-histidine level during vegetative growth","type":"exact"},{"name":"increased cellular trimethylhistidine level during vegetative growth","type":"exact"},{"name":"increased hercynine level during vegetative growth","type":"exact"}],"termid":"FYPO:0003518"}


id: GO:0009440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyanate, NCO-, the anion of cyanic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"cyanate metabolic process","termid":"GO:0009439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cyanate catabolic process","synonyms":[{"name":"cyanate breakdown","type":"exact"},{"name":"cyanate catabolism","type":"exact"},{"name":"cyanate degradation","type":"exact"}],"termid":"GO:0009440"}


id: PBO:0002153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex ATPase subunit Get3 (predicted)","termid":"PBO:0002153"}


id: PBO:0074928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 96A","termid":"PBO:0074928"}


id: GO:1905495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of G-quadruplex DNA binding.","definition_xrefs":["PMID:26503245","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-quadruplex DNA binding (obsolete GO:1905495)","synonyms":[{"name":"activation of G quadruplex DNA binding","type":"narrow"},{"name":"activation of G quartet DNA binding","type":"narrow"},{"name":"activation of G-DNA binding","type":"narrow"},{"name":"activation of G-quadruplex DNA binding","type":"narrow"},{"name":"activation of G-quartet DNA binding","type":"narrow"},{"name":"activation of quadruplex DNA binding","type":"narrow"},{"name":"activation of tetraplex DNA binding","type":"narrow"},{"name":"positive regulation of G quadruplex DNA binding","type":"exact"},{"name":"positive regulation of G quartet DNA binding","type":"exact"},{"name":"positive regulation of G-DNA binding","type":"exact"},{"name":"positive regulation of G-quartet DNA binding","type":"exact"},{"name":"positive regulation of quadruplex DNA binding","type":"exact"},{"name":"positive regulation of tetraplex DNA binding","type":"exact"},{"name":"up regulation of G quadruplex DNA binding","type":"exact"},{"name":"up regulation of G quartet DNA binding","type":"exact"},{"name":"up regulation of G-DNA binding","type":"exact"},{"name":"up regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up regulation of G-quartet DNA binding","type":"exact"},{"name":"up regulation of quadruplex DNA binding","type":"exact"},{"name":"up regulation of tetraplex DNA binding","type":"exact"},{"name":"up-regulation of G quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G quartet DNA binding","type":"exact"},{"name":"up-regulation of G-DNA binding","type":"exact"},{"name":"up-regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G-quartet DNA binding","type":"exact"},{"name":"up-regulation of quadruplex DNA binding","type":"exact"},{"name":"up-regulation of tetraplex DNA binding","type":"exact"},{"name":"upregulation of G quadruplex DNA binding","type":"exact"},{"name":"upregulation of G quartet DNA binding","type":"exact"},{"name":"upregulation of G-DNA binding","type":"exact"},{"name":"upregulation of G-quadruplex DNA binding","type":"exact"},{"name":"upregulation of G-quartet DNA binding","type":"exact"},{"name":"upregulation of quadruplex DNA binding","type":"exact"},{"name":"upregulation of tetraplex DNA binding","type":"exact"}],"termid":"GO:1905495"}


id: MONDO:0010092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Filippi syndrome is characterized by microcephaly, cutaneous syndactyly of the fingers and toes, intellectual deficit, growth retardation and a characteristic facies (high and broad nasal bridge, thin alae nasi, micrognathia and a high frontal hairline). So far, less than 25 cases have been reported. Cryptorchidism, polydactyly, and teeth and hair anomalies may also be present. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:3255"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Filippi syndrome","secondary_identifiers":["icd11.foundation:1989471300","OMIM:272440","SCTID:720954000","DOID:0112194","UMLS:C0795940","MESH:C538152","NORD:1149","MEDGEN:163197","GARD:62"],"synonyms":[{"name":"FILIPPI syndrome","type":"related"},{"name":"FLPIS","type":"related"},{"name":"Filippi syndrome","type":"exact"},{"name":"Scott craniodigital syndrome with intellectual disability","type":"related"},{"name":"Scott craniodigital syndrome with mental retardation","type":"related"},{"name":"syndactyly type I with microcephaly and intellectual disability","type":"related"},{"name":"syndactyly type I with microcephaly and mental retardation","type":"related"},{"name":"syndactyly, type I, with microcephaly and intellectual disability","type":"related"},{"name":"syndactyly, type I, with microcephaly and mental retardation","type":"related"},{"name":"type 1 syndactyly-microcephaly-intellectual disability syndrome","type":"exact"},{"name":"unusual facial appearance, microcephaly, growth and intellectual disability and syndactyly","type":"related"},{"name":"unusual facial appearance, microcephaly, growth and mental retardation and syndactyly","type":"related"}],"termid":"MONDO:0010092","xrefs":{"Monarch":{"xref_id":"0010092"}}}


id: FYPO:0002582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature mitochondrial transfer RNA (tRNA) measured in a cell is normal (i.e. indistinguishable from wild type). Total tRNA or a specific tRNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mature tRNA level","termid":"FYPO:0002580"},{"relation_name":"is_a","term_name":"normal mitochondrial RNA level","termid":"FYPO:0004960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mature mitochondrial tRNA level","synonyms":[{"name":"normal mature mitochondrial tRNA accumulation","type":"related"},{"name":"normal mature mitochondrial tRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature mitochondrial tRNA level during vegetative growth","type":"exact"},{"name":"normal mature mitochondrial tRNA transcript level","type":"exact"},{"name":"normal mature mitochondrial transfer RNA level","type":"exact"},{"name":"normal mitochondrial tRNA level","type":"broad"}],"termid":"FYPO:0002582"}


id: MONDO:0002759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A verrucous carcinoma that involves the urinary bladder.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder squamous cell carcinoma","termid":"MONDO:0002760"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder verrucous carcinoma","secondary_identifiers":["MEDGEN:267376","UMLS:C1511208","NCIT:C39832","DOID:3741"],"synonyms":[{"name":"bladder verrucous carcinoma","type":"exact"},{"name":"bladder verrucous squamous cell carcinoma","type":"exact"},{"name":"urinary bladder verrucous carcinoma","type":"exact"}],"termid":"MONDO:0002759","xrefs":{"Monarch":{"xref_id":"0002759"}}}


id: PBO:0059772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 46","termid":"PBO:0059772"}


id: GO:0032227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, dopaminergic","termid":"GO:0032225"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, dopaminergic","termid":"GO:0001963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, dopaminergic","synonyms":[{"name":"down regulation of synaptic transmission, dopaminergic","type":"exact"},{"name":"down-regulation of synaptic transmission, dopaminergic","type":"exact"},{"name":"downregulation of synaptic transmission, dopaminergic","type":"exact"},{"name":"inhibition of synaptic transmission, dopaminergic","type":"narrow"}],"termid":"GO:0032227"}


id: PR:Q9Y7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Nogo-B receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03491","PRO:DNx","PANTHER:PTHR21528:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate syntase complex subunit nus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.06c","secondary_identifiers":["UniProtKB:Q9Y7K8"],"synonyms":[{"name":"Spom972h-NUS1","type":"exact"},{"name":"UDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"di-trans,poly-cis-decaprenylcistransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"undecaprenyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7K8"}


id: PBO:0061956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 12","termid":"PBO:0061956"}


id: PBO:0027172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_mitotic_interphase","termid":"PBO:0027172"}


id: PBO:0069521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 790, pseudogene","termid":"PBO:0069521"}


id: MONDO:0020051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete total autosomal trisomy (obsolete MONDO:0020051)","secondary_identifiers":["Orphanet:98131"],"termid":"MONDO:0020051","xrefs":{"Monarch":{"xref_id":"0020051"}}}


id: GO:0060491
data:
  {"annotated_genes":["SJAG_03453","SJAG_01794","SJAG_02379","SJAG_04509","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111694,91172,88213,90191,93804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell projection assembly.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"cell projection assembly","termid":"GO:0030031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection formation","type":"related"}],"termid":"GO:0060491","terms_by_termid":{"GO:1902917":null}}


id: MONDO:0016971
data:
  {"annotated_genes":["SJAG_03470","SJAG_01491","SJAG_04316","SJAG_04228","SJAG_04053","SJAG_03188","SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021018"},{"annotations":[86115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012034"},{"annotations":[85524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[86990,86991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[86272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[86891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957270"}]},"cv_name":"mondo","definition":"Limb-girdle muscular dystrophy (LGMD) is a heterogeneous group of muscular dystrophies characterized by proximal weakness affecting the pelvic and shoulder girdles. Cardiac and respiratory impairment may be observed in certain forms of LGMD.","definition_xrefs":["Orphanet:263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_03470":null,"SJAG_03715":null,"SJAG_04053":null,"SJAG_04228":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"limb-girdle muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6907","SCTID:78468005","DOID:11724","NANDO:2200858","NANDO:1200490","NCIT:C84828","MEDGEN:151940","icd11.foundation:887807212","UMLS:C0686353","MESH:D049288"],"synonyms":[{"name":"LGMD","type":"exact"},{"name":"Leyden-Mbius muscular dystrophy","type":"exact"},{"name":"Leyden-Mobius muscular dystrophy","type":"exact"},{"name":"erb's muscular dystrophy","type":"exact"},{"name":"limb girdle muscular dystrophy","type":"exact"},{"name":"limb-girdle muscular dystrophy","type":"exact"}],"termid":"MONDO:0016971","terms_by_termid":{"MONDO:0012034":null,"MONDO:0012248":null,"MONDO:0013162":null,"MONDO:0014142":null,"MONDO:0021018":null,"MONDO:0957270":null},"xrefs":{"Monarch":{"xref_id":"0016971"}}}


id: GO:0018251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-dehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["RESID:AA0183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"},{"relation_name":"is_a","term_name":"protein dehydration","termid":"GO:0018249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dehydrogenation","termid":"GO:0018251"}


id: GO:0050691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism.","definition_xrefs":["GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response to virus","termid":"GO:0050688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to virus by host","synonyms":[{"name":"host regulation of antiviral response","type":"exact"},{"name":"regulation by host of antiviral response","type":"exact"},{"name":"regulation of antiviral response by host","type":"related"}],"termid":"GO:0050691"}


id: GO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microcin B17, a bactericidal peptide (antibiotic) produced by some enteric bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:11292337","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcin transport","termid":"GO:0042884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microcin B17 transport","termid":"GO:0042885"}


id: PBO:0062969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 12","termid":"PBO:0062969"}


id: MONDO:0023186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fraser Jequier Chen syndrome","secondary_identifiers":["UMLS:C2930912","MEDGEN:419665","MESH:C535481"],"synonyms":[{"name":"chondrodysplasia, situs inversus totalis, cleft epiglottis and larynx, hexadactyly of hands and feet, pancreatic cystic dysplasia, renal dysplasia/abs","type":"related"}],"termid":"MONDO:0023186","xrefs":{"Monarch":{"xref_id":"0023186"}}}


id: PBO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1748 family protein","termid":"PBO:0002015"}


id: MONDO:0014805
data:
  {"annotated_genes":["SJAG_00573","SJAG_03686"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86132,86131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958071"}]},"cv_name":"mondo","definition":"A rare genetic intellectual disability syndrome characterized by global developmental delay, intellectual disability, severe speech delay, behavioral abnormalities (including impulsivity, compulsivity, stubbornness, manipulative behaviors, temper tantrums, and aggressive behaviors), autism spectrum disorder and mild and variable dysmorphic facies (including deep-set eyes and a prominent nasal septum, extending below the alae nasi) due to point mutation of USP7 gene or 16p13.2 microdeletion where USP7 is completely or partially deleted. Behavioral abnormalities are more pronounced in microdeletion. Patients may also have hypotonia, feeding problems, delayed walking with unsteady gait, hypogonadism in males, seizures and ocular anomalies (such as myopia, estropia, strabismus, and nystagmus).","definition_xrefs":["Orphanet:643549"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_03686":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Hao-Fountain syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1719035","NORD:1917","UMLS:C5393908"],"synonyms":[{"name":"HAFOUS","type":"exact"},{"name":"USP7-Related Diseases","type":"exact"}],"termid":"MONDO:0014805","terms_by_termid":{"MONDO:0958071":null},"xrefs":{"Monarch":{"xref_id":"0014805"}}}


id: MOD:01552
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01552"}


id: PBO:0055973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and IQ motif containing 3","termid":"PBO:0055973"}


id: PBO:0043726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 5","termid":"PBO:0043726"}


id: GO:1903851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cristae formation.","definition_xrefs":["GOC:PARL","PMID:19279012","GO_REF:0000058","GOC:TermGenie","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of cristae formation","termid":"GO:1903850"},{"relation_name":"negatively_regulates","term_name":"cristae formation","termid":"GO:0042407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"negative regulation of cristae formation","synonyms":[{"name":"down regulation of cristae formation","type":"exact"},{"name":"down-regulation of cristae formation","type":"exact"},{"name":"downregulation of cristae formation","type":"exact"},{"name":"inhibition of cristae formation","type":"narrow"}],"termid":"GO:1903851"}


id: PBO:0090031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop8","termid":"PBO:0090031"}


id: MONDO:0017456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic polydactyly","termid":"MONDO:0011348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central polydactyly of fingers","secondary_identifiers":["UMLS:C0431903","MEDGEN:609220","SCTID:205130008","Orphanet:295004","GARD:21200","icd11.foundation:243366415"],"synonyms":[{"name":"central polydactyly","type":"related"},{"name":"central polydactyly of hand","type":"exact"},{"name":"mesoaxial polydactyly","type":"exact"},{"name":"mesoaxial polydactyly of fingers","type":"exact"},{"name":"mirror hand","type":"exact"}],"termid":"MONDO:0017456","xrefs":{"Monarch":{"xref_id":"0017456"}}}


id: GO:0042046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the W-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear tungsten ion (W) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"W-molybdopterin cofactor metabolic process","synonyms":[{"name":"Moco metabolic process","type":"broad"},{"name":"Moco metabolism","type":"broad"},{"name":"W-molybdopterin cofactor metabolism","type":"exact"}],"termid":"GO:0042046"}


id: PBO:0059017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 3","termid":"PBO:0059017"}


id: MONDO:0011228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creases, infra-auricular cutaneous, with tall stature and advanced bone age","secondary_identifiers":["UMLS:C1865360","OMIM:602472","MESH:C566543","MEDGEN:356259"],"synonyms":[{"name":"creases, infra-auricular cutaneous, with tall stature and advanced bone age","type":"exact"}],"termid":"MONDO:0011228","xrefs":{"Monarch":{"xref_id":"0011228"}}}


id: FYPO:0002249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of fructose binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased fructose binding","synonyms":[{"name":"reduced fructose binding","type":"exact"}],"termid":"FYPO:0002249"}


id: GO:0010766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transport","termid":"GO:0002028"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium ion transport","termid":"GO:0010766"}


id: PBO:0081596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 2","termid":"PBO:0081596"}


id: GO:0030501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone mineralization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"is_a","term_name":"positive regulation of ossification","termid":"GO:0045778"},{"relation_name":"is_a","term_name":"positive regulation of biomineral tissue development","termid":"GO:0070169"},{"relation_name":"positively_regulates","term_name":"bone mineralization","termid":"GO:0030282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone mineralization","synonyms":[{"name":"activation of bone mineralization","type":"narrow"},{"name":"stimulation of bone mineralization","type":"narrow"},{"name":"up regulation of bone mineralization","type":"exact"},{"name":"up-regulation of bone mineralization","type":"exact"},{"name":"upregulation of bone mineralization","type":"exact"}],"termid":"GO:0030501"}


id: GO:0019912
data:
  {"annotated_genes":["SJAG_01000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92464],"is_not":false,"summary":null,"term":"GO:0019912"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; increases the activity of a cyclin-dependent protein kinase (CDK).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"protein kinase activator activity","termid":"GO:0030295"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"regulates","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"regulates","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"positively_regulates","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"positively_regulates","termid":"GO:0140096"},{"rel_name":"positively_regulates","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"regulates","termid":"GO:0016301"},{"rel_name":"positively_regulates","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0098772","GO:0003824","GO:0016301","GO:0030234","GO:0003674","GO:0140677","GO:0140096","GO:0004672","GO:0016740"],"is_obsolete":false,"name":"cyclin-dependent protein kinase activating kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019913"],"synonyms":[{"name":"CAK","type":"exact"},{"name":"cdk-activating kinase activity","type":"exact"},{"name":"cyclin-dependent protein kinase activating kinase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0019912","terms_by_termid":{"GO:0019912":null}}


id: MONDO:0016930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 9 disorder","termid":"MONDO:0700016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy/tetrasomy of chromosome 9","secondary_identifiers":["GARD:20850","Orphanet:262643","MEDGEN:1841529","UMLS:C5816685"],"synonyms":[{"name":"partial duplication/triplication of chromosome 9","type":"exact"},{"name":"partial trisomy/tetrasomy of chromosome type 9","type":"exact"}],"termid":"MONDO:0016930","xrefs":{"Monarch":{"xref_id":"0016930"}}}


id: PBO:0012832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Septum Promoting GTPase","termid":"PBO:0012832"}


id: GO:0021587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellum is generated and organized. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.","definition_xrefs":["GOC:dgh","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum morphogenesis","termid":"GO:0021587"}


id: GO:2001057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a reactive nitrogen species.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reactive nitrogen species metabolic process","synonyms":[{"name":"RNS metabolic process","type":"exact"},{"name":"RNS metabolism","type":"exact"},{"name":"reactive nitrogen species metabolism","type":"exact"}],"termid":"GO:2001057"}


id: GO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an elaioplast, a leucoplast in which oil is stored.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast organization","termid":"GO:0009659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elaioplast organization","synonyms":[{"name":"elaioplast organisation","type":"exact"},{"name":"elaioplast organization and biogenesis","type":"related"}],"termid":"GO:0043579"}


id: PBO:0067490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 624, pseudogene","termid":"PBO:0067490"}


id: GO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase V, originating at a Pol V-specific promoter.","definition_xrefs":["GOC:txnOH","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"transcription by RNA polymerase V","synonyms":[{"name":"transcription from RNA pol V promoter","type":"exact"},{"name":"transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:0001060"}


id: GO:0072245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a metanephric glomerular parietal epithelial cell. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell differentiation","termid":"GO:0072139"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular parietal epithelial cell differentiation","termid":"GO:0072245"}


id: GO:0032193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ubiquinone, via the intermediates 2-polyprenylphenol and 2-polyprenyl-6-hydroxyphenol.","definition_xrefs":["GOC:mah","PMID:11583838"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone biosynthetic process via 2-polyprenylphenol (obsolete GO:0032193)","termid":"GO:0032193"}


id: PBO:0083622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3-binding protein of the mitochondrial pyruvate dehydrogenase complex; plays a structural role in the complex by binding and positioning dihydrolipoamide dehydrogenase (E3) to the dihydrolipoamide acetyltransferase (E2) core","termid":"PBO:0083622"}


id: PBO:0058160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4454","termid":"PBO:0058160"}


id: PBO:0017820
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caffeine Induced cell Death","termid":"PBO:0017820"}


id: PBO:0081206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN7 ZNF cluster antisense RNA 1","termid":"PBO:0081206"}


id: PBO:0069278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 534, pseudogene","termid":"PBO:0069278"}


id: MONDO:0008848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impaired conduction of cardiac impulse that can occur anywhere along the conduction pathway, such as between the sinoatrial node and the right atrium (sa block) or between atria and ventricles (av block). Heart blocks can be classified by the duration, frequency, or completeness of conduction block. Reversibility depends on the degree of structural or functional defects.","definition_xrefs":["MESH:D006327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrioventricular dissociation","secondary_identifiers":["UMLS:C0004331","icd11.foundation:268503599","ICD9:426.89","MEDGEN:2496","OMIM:209600","SCTID:50799005","HP:0011709"],"synonyms":[{"name":"A-V dissociation","type":"related"},{"name":"atrioventricular dissociation","type":"exact"},{"name":"atrioventricular dissociation (disease)","type":"exact"}],"termid":"MONDO:0008848","xrefs":{"Monarch":{"xref_id":"0008848"}}}


id: PBO:0024811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_relation_between_material_entity_and_a_process","termid":"PBO:0024811"}


id: GO:0005940
data:
  {"annotated_genes":["SJAG_04375","SJAG_01769","SJAG_04470","SJAG_00663","SJAG_01277","SJAG_03374","SJAG_00118","SJAG_04703","SJAG_03688","SJAG_03703","SJAG_02645","SJAG_03843","SJAG_04566","SJAG_01658"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75779],"is_not":false,"summary":null,"term":"GO:0005940"},{"annotations":[94822,106335,116295,100433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032175"},{"annotations":[98140,113104,104233,98216,101278,102085,108271,118966,118198,100434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036391"},{"annotations":[94826,106339,116298,100440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane at the site of cytokinesis; composed of members of the conserved family of filament-forming proteins called septins as well as septin-associated proteins. This type of septin structure is observed at the bud neck of budding fungal cells, at the site of cell division in animal cells, at the junction between the mother cell and a pseudohyphal projection, and also within hyphae of filamentous fungi at sites where a septum will form.","definition_xrefs":["PMID:16009555","GOC:krc","GOC:mah","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_01769":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_03703":null,"SJAG_03843":null,"SJAG_04375":null,"SJAG_04470":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"septin ring","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030481","Wikipedia:Septin_ring"],"termid":"GO:0005940","terms_by_termid":{"GO:0005940":null,"GO:0032169":null,"GO:0032175":null,"GO:0036391":null}}


id: PBO:0001838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn11","termid":"PBO:0001838"}


id: PBO:0086178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the spindle pole body (SPB) duplication; localizes at the cytoplasmic side of the central plaque periphery of the SPB; forms a complex with a nuclear envelope protein Mps2p and SPB components Spc29p and Kar1p; required for mitotic functions of Cdc5p","termid":"PBO:0086178"}


id: MONDO:0010452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the DLG3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 90","secondary_identifiers":["UMLS:C3275443","DOID:0112041","MEDGEN:477074","OMIM:300850","GARD:22690"],"synonyms":[{"name":"DLG3 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX90","type":"related"},{"name":"intellectual developmental disorder, X-linked 90, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 90","type":"exact"},{"name":"intellectual disability, X-linked type 90","type":"exact"},{"name":"mental retardation, X-linked 90","type":"related"},{"name":"mental retardation, X-linked type 90","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in DLG3","type":"exact"}],"termid":"MONDO:0010452","xrefs":{"Monarch":{"xref_id":"0010452"}}}


id: PBO:0030102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_citrulline_level","termid":"PBO:0030102"}


id: MONDO:0002812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the anatomical structures of the inner ear secondary to an infectious process. Symptoms include severe vertigo, nausea, vomiting, anxiety, and pain. Viral etiology is most common, and recent history of an upper respiratory infection is common. In rare cases an infection of the middle ear can spread to the inner ear, resulting in a bacterial or fungal etiology.","definition_xrefs":["NCIT:C27339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"},{"relation_name":"is_a","term_name":"ear infection","termid":"MONDO:0021666"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious otitis interna","secondary_identifiers":["UMLS:C1168225","MEDGEN:217000"],"synonyms":[{"name":"infectious labyrinthitis","type":"exact"},{"name":"infectious otitis interna","type":"exact"},{"name":"inner Ear infection","type":"exact"},{"name":"inner ear infection","type":"exact"},{"name":"internal Ear infection","type":"exact"}],"termid":"MONDO:0002812","xrefs":{"Monarch":{"xref_id":"0002812"}}}


id: PBO:0002711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl aminopeptidase Aap1","termid":"PBO:0002711"}


id: MONDO:0100357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mild or intermediate form of a genetic disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"classic or non-classic genetic disease presentation","termid":"MONDO:0100355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-classic presentation","termid":"MONDO:0100357","xrefs":{"Monarch":{"xref_id":"0100357"}}}


id: PR:O59699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.02c","synonyms":[{"name":"Spom972h-SPBC36.02c","type":"exact"}],"termid":"PR:O59699"}


id: PBO:0111813
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain","termid":"PBO:0111813"}


id: PBO:0011424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate transmembrane transporter subunit Mpc2","termid":"PBO:0011424"}


id: PBO:0063419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE3A antisense RNA 1","termid":"PBO:0063419"}


id: PBO:0027727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CDRE_promoter_in_response_to_micafungin","termid":"PBO:0027727"}


id: PBO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH kinase Pos5 (predicted)","termid":"PBO:0002282"}


id: GO:0072347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anesthetic stimulus. An anesthetic is a substance that causes loss of feeling, awareness, or sensation.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anesthetic","synonyms":[{"name":"response to anaesthetic","type":"exact"}],"termid":"GO:0072347"}


id: GO:0030597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of N-glycosidic bonds in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787","GO:0140098"],"is_obsolete":false,"name":"RNA glycosylase activity","termid":"GO:0030597"}


id: PBO:0046443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPN2 intronic transcript 1","termid":"PBO:0046443"}


id: PBO:0076461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase 1","termid":"PBO:0076461"}


id: GO:0060527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The branching morphogenesis process in which the prostate epithelial cords branch freely to create the structure of the prostate acini.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in prostate gland morphogenesis","termid":"GO:0060442"},{"relation_name":"part_of","term_name":"prostate glandular acinus morphogenesis","termid":"GO:0060526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis","termid":"GO:0060527"}


id: PBO:0068465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 42, pseudogene","termid":"PBO:0068465"}


id: GO:0031350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plastid membrane (obsolete GO:0031350)","synonyms":[{"name":"intrinsic to plastid membrane","type":"narrow"}],"termid":"GO:0031350"}


id: GO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed orientation of natural killer cell signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with a cell displaying natural killer cell activating ligands.","definition_xrefs":["GOC:mgi_curators","PMID:9759849","PMID:12615886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of lymphocyte polarity","termid":"GO:0001767"},{"relation_name":"part_of","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of natural killer cell polarity","synonyms":[{"name":"NK cell polarization","type":"exact"},{"name":"establishment of NK cell polarity","type":"exact"},{"name":"natural killer cell polarization","type":"exact"}],"termid":"GO:0001770"}


id: PBO:0074734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 92","termid":"PBO:0074734"}


id: PBO:0042793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 170 pseudogene 1","termid":"PBO:0042793"}


id: PBO:0116310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase Aro3","termid":"PBO:0116310"}


id: PBO:0004674
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gyrate atrophy of choroid and retina","termid":"PBO:0004674"}


id: PBO:0012292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit Pob3","termid":"PBO:0012292"}


id: PBO:0052762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 54","termid":"PBO:0052762"}


id: PBO:0063735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin 1","termid":"PBO:0063735"}


id: GO:0036521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of protein localisation to the host phagosome. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","PMID:25063865","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host protein localization to phagocytic vesicle (obsolete GO:0036521)","synonyms":[{"name":"modulation by symbiont of host protein localisation to phagosome","type":"related"}],"termid":"GO:0036521"}


id: PBO:0058591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6724-2","termid":"PBO:0058591"}


id: MONDO:0011575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebro-oculo-nasal syndrome is a multisystem malformation syndrome that has been reported in about 10 patients. The clinical features include bilateral anophthalmia, abnormal nares, central nervous system anomalies, and neurodevelopmental delay.","definition_xrefs":["Orphanet:66625"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrooculonasal syndrome","secondary_identifiers":["OMIM:605627","MESH:C565313","SCTID:720855003","MEDGEN:340138","UMLS:C1854108","GARD:3480"],"synonyms":[{"name":"cerebrooculonasal syndrome","type":"exact"}],"termid":"MONDO:0011575","xrefs":{"Monarch":{"xref_id":"0011575"}}}


id: PBO:0057604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-1","termid":"PBO:0057604"}


id: PBO:0045688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 2","termid":"PBO:0045688"}


id: PBO:0047676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLII actin remodeling protein","termid":"PBO:0047676"}


id: MONDO:0005141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus pseudomonas.","definition_xrefs":["MESH:D011552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudomonas infection","secondary_identifiers":["ICD9:041.7","UMLS:C0033817","EFO:0001076","SCTID:63398001","MEDGEN:10993"],"synonyms":[{"name":"Pseudomonas caused disease or disorder","type":"exact"},{"name":"Pseudomonas disease or disorder","type":"exact"},{"name":"Pseudomonas infectious disease","type":"exact"}],"termid":"MONDO:0005141","xrefs":{"Monarch":{"xref_id":"0005141"}}}


id: MONDO:0006825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prion disease found exclusively among the Fore linguistic group natives of the highlands of new guinea. The illness is primarily restricted to adult females and children of both sexes. It is marked by the subacute onset of tremor and ataxia followed by motor weakness and incontinence. Death occurs within 3-6 months of disease onset. The condition is associated with ritual cannibalism, and has become rare since this practice has been discontinued. Pathologic features include a noninflammatory loss of neurons that is most prominent in the cerebellum, glial proliferation, and amyloid plaques. (From Adams et al., Principles of Neurology, 6th ed, p773)","definition_xrefs":["MESH:D007729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"human prion disease","termid":"MONDO:0018926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"kuru","secondary_identifiers":["ICD9:046.0","ICD10CM:A81.81","Orphanet:454745","SCTID:86188000","icd11.foundation:553889510","DOID:648","EFO:1001008","MedDRA:10023497","MEDGEN:9653","UMLS:C0022802","GARD:7617"],"synonyms":[{"name":"kuru encephalopathy","type":"exact"}],"termid":"MONDO:0006825","xrefs":{"Monarch":{"xref_id":"0006825"}}}


id: GO:0050185
data:
  {"annotated_genes":["SJAG_01570"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73069],"is_not":false,"summary":null,"term":"GO:0050185"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol + H2O = 1-acyl-sn-glycero-3-phospho-D-myo-inositol + a carboxylate + H+.","definition_xrefs":["EC:3.1.1.52","RHEA:18001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"phosphatidylinositol deacylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PHOSPHATIDYLINOSITOL-DEACYLASE-RXN","KEGG_REACTION:R03360"],"synonyms":[{"name":"1-phosphatidyl-D-myo-inositol 2-acylhydrolase activity","type":"related"},{"name":"phosphatidylinositol phospholipase A2 activity","type":"related"}],"termid":"GO:0050185","terms_by_termid":{"GO:0050185":null}}


id: GO:0090405
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection part that is a branch of a unicellular trichome.","definition_xrefs":["GOC:tb","PO:0025537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unicellular trichome branch","termid":"GO:0090405"}


id: PBO:0054272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1659","termid":"PBO:0054272"}


id: PBO:0077941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 2-1","termid":"PBO:0077941"}


id: FYPO:0003779
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119879,119884,119886,119914],"is_not":false,"summary":null,"term":"FYPO:0003779"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03449":null},"genotype_count":4,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002403"],"is_obsolete":false,"name":"abnormal nuclear envelope morphology during mitosis","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449","SJAG_01745"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1delta","lem2delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal nuclear envelope morphology during mitotic M phase","type":"related"},{"name":"abnormal nuclear envelope morphology during mitotic nuclear division","type":"exact"},{"name":"abnormal nuclear membrane morphology during mitosis","type":"narrow"}],"termid":"FYPO:0003779","terms_by_termid":{"FYECO:0000162":null,"FYPO:0003779":null,"FYPO_EXT:0000001":null}}


id: MONDO:0000993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive prostate carcinoma characterized by the presence of squamous differentiation of the malignant cellular infiltrate. There is no evidence of glandular differentiation.","definition_xrefs":["NCIT:C5536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate squamous cell carcinoma","secondary_identifiers":["SCTID:399590005","UMLS:C1302530","DOID:10287","MEDGEN:226996","ONCOTREE:PRSC"],"synonyms":[{"name":"PRSC","type":"related"},{"name":"prostate gland squamous cell carcinoma","type":"exact"},{"name":"prostate squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of prostate","type":"exact"},{"name":"squamous cell carcinoma of the prostate","type":"exact"}],"termid":"MONDO:0000993","xrefs":{"Monarch":{"xref_id":"0000993"}}}


id: PBO:0078979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 5-1","termid":"PBO:0078979"}


id: PBO:0028885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_splicing","termid":"PBO:0028885"}


id: FYPO:0002521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population undergoes conjugation with wild type h- cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased conjugation frequency","termid":"FYPO:0000303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased frequency of conjugation with h- cells","synonyms":[{"name":"decreased conjugation with WT h- cells","type":"exact"},{"name":"decreased frequency of conjugation with h minus cells","type":"exact"},{"name":"decreased frequency of mating with h- cells","type":"exact"},{"name":"reduced frequency of conjugation with h- cells","type":"exact"}],"termid":"FYPO:0002521"}


id: PBO:0065447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 4","termid":"PBO:0065447"}


id: PBO:0056656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 23","termid":"PBO:0056656"}


id: MONDO:1012704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal and skeletal dysplasia that occurs in dogs due to a mutation in the COL9A3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal and skeletal dysplasia, dog","termid":"MONDO:1012317"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculoskeletal dysplasia, COL9A3-related, dog","secondary_identifiers":["OMIA:001522-9615"],"synonyms":[{"name":"oculoskeletal dysplasia 1, dog","type":"related"}],"termid":"MONDO:1012704","xrefs":{"Monarch":{"xref_id":"1012704"}}}


id: PBO:0082259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amidase; removes the amide group from N-terminal asparagine and glutamine residues to generate proteins with N-terminal aspartate and glutamate residues that are targets of ubiquitin-mediated degradation","termid":"PBO:0082259"}


id: MONDO:0007994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thanatophoric dysplasia type 2","termid":"MONDO:0008547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"micromelic bone dysplasia with cloverleaf skull","secondary_identifiers":["UMLS:C1834928","MEDGEN:322531","GARD:1404","OMIM:156830","MESH:C536429"],"synonyms":[{"name":"micromelic bone dysplasia with cloverleaf skull","type":"exact"}],"termid":"MONDO:0007994","xrefs":{"Monarch":{"xref_id":"0007994"}}}


id: MONDO:0020489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial hyperreninemic hypoaldosteronism type 1 (obsolete MONDO:0020489)","secondary_identifiers":["NANDO:2200365","Orphanet:99763"],"synonyms":[{"name":"18-hydroxylase deficiency","type":"exact"},{"name":"18-oxidase deficiency","type":"exact"},{"name":"CMO I","type":"exact"},{"name":"CMO II","type":"exact"},{"name":"FHHA1","type":"exact"},{"name":"aldosterone synthase deficiency","type":"exact"},{"name":"corticosterone methyloxidase deficiency type I","type":"exact"}],"termid":"MONDO:0020489","xrefs":{"Monarch":{"xref_id":"0020489"}}}


id: GO:0016303
data:
  {"annotated_genes":["SJAG_00114"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71767],"is_not":false,"summary":null,"term":"GO:0016303"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol + ATP = a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ADP + H+.","definition_xrefs":["EC:2.7.1.137","RHEA:12709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-109699","Reactome:R-HSA-1676024","Reactome:R-HSA-9670433","Reactome:R-HSA-1433514","GO:0004429","Reactome:R-HSA-1675939","KEGG_REACTION:R03362","MetaCyc:1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN","Reactome:R-HSA-1675961","Reactome:R-HSA-2045911","Reactome:R-HSA-5672012","Reactome:R-HSA-6798174","Reactome:R-HSA-9680389"],"synonyms":[{"name":"1-phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"PI3-kinase activity","type":"exact"},{"name":"PI3K","type":"exact"},{"name":"PtdIns-3-kinase activity","type":"exact"},{"name":"phosphatidylinositol 3-kinase activity, class I","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class III","type":"narrow"},{"name":"phosphatidylinositol 3-kinase, class I, catalyst activity","type":"narrow"},{"name":"type I phosphatidylinositol kinase activity","type":"narrow"},{"name":"type III phosphoinositide 3-kinase activity","type":"narrow"}],"termid":"GO:0016303","terms_by_termid":{"GO:0016303":null}}


id: GO:0034927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyrene + O2 + 2 H+ + 2 e- = pyrene-1,2-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrene 1,2-monooxygenase activity (obsolete GO:0034927)","termid":"GO:0034927"}


id: GO:0004059
data:
  {"annotated_genes":["SJAG_02296"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74761],"is_not":false,"summary":null,"term":"GO:0004059"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an aralkylamine = CoA + an N-acetylaralkylamine.","definition_xrefs":["EC:2.3.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"aralkylamine N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ARALKYLAMINE-N-ACETYLTRANSFERASE-RXN","Reactome:R-HSA-209792","RHEA:20497"],"synonyms":[{"name":"AANAT activity","type":"related"},{"name":"acetyl-CoA:2-arylethylamine N-acetyltransferase activity","type":"related"},{"name":"arylalkylamine N-acetyltransferase activity","type":"related"},{"name":"melatonin rhythm enzyme activity","type":"related"},{"name":"serotonin N-acetyltransferase activity","type":"narrow"},{"name":"serotonin acetylase activity","type":"narrow"},{"name":"serotonin acetyltransferase activity","type":"narrow"}],"termid":"GO:0004059","terms_by_termid":{"GO:0004059":null}}


id: MONDO:0013506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation on chromosome 7q36.3.","definition_xrefs":["DOID:0070092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"},{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 16","secondary_identifiers":["MEDGEN:462758","OMIM:613959","UMLS:C3151408"],"synonyms":[{"name":"SCZD16","type":"exact"},{"name":"chromosome 7Q36.3 Duplication syndrome, 362-Kb","type":"related"},{"name":"schizophrenia 16","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 7Q36.3-related","type":"related"},{"name":"schizophrenia type 16","type":"exact"}],"termid":"MONDO:0013506","xrefs":{"Monarch":{"xref_id":"0013506"}}}


id: PBO:0027601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_morphology","termid":"PBO:0027601"}


id: PBO:0064117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 4","termid":"PBO:0064117"}


id: PBO:0065424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 9","termid":"PBO:0065424"}


id: GO:0046811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of histone deacetylase, which catalyzes of the removal of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes.","definition_xrefs":["PMID:10482575","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"histone deacetylase regulator activity","termid":"GO:0035033"},{"relation_name":"negatively_regulates","term_name":"histone deacetylase activity","termid":"GO:0004407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033558"},{"rel_name":"negatively_regulates","termid":"GO:0033558"},{"rel_name":"negatively_regulates","termid":"GO:0019213"},{"rel_name":"negatively_regulates","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"regulates","termid":"GO:0019213"},{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0033558","GO:0030234","GO:0004857","GO:0140096","GO:0003824","GO:0019213","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"histone deacetylase inhibitor activity","termid":"GO:0046811"}


id: GO:1901166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural crest cell migration that is involved in autonomic nervous system development.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration","termid":"GO:0001755"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration involved in autonomic nervous system development","termid":"GO:1901166"}


id: PATO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that inheres in a molecular entity by virtue of whether that there is a presence of cycles in the connection of the atoms within the molecular entity.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclicity","termid":"PATO:0002183"}


id: PBO:0083783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in maturation of 18S rRNA; depletion leads to inhibited pre-rRNA processing and reduced polysome levels; localizes primarily to the nucleolus","termid":"PBO:0083783"}


id: PR:O74984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.06c gene.","definition_xrefs":["UniProtKB:O74984","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein homolog C338.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.06c","synonyms":[{"name":"Spom972h-SPCC338.06c","type":"exact"}],"termid":"PR:O74984"}


id: GO:0050998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"nitric-oxide synthase binding","synonyms":[{"name":"NOS binding","type":"exact"}],"termid":"GO:0050998"}


id: PBO:0050195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 12","termid":"PBO:0050195"}


id: GO:0060469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of transcription as a part of the process of egg activation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in egg activation (obsolete GO:0060469)","synonyms":[{"name":"activation of the egg genome","type":"related"},{"name":"activation of the maternal genome","type":"related"}],"termid":"GO:0060469"}


id: FYPO:0001749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tacrolimus when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to tacrolimus","termid":"FYPO:0000086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tacrolimus during salt stress","synonyms":[{"name":"hypersensitive to tacrolimus during salt stress","type":"exact"},{"name":"sensitive to FK506 during salt stress","type":"exact"},{"name":"sensitive to tacrolimus during salt stress during mitotic cell cycle","type":"related"},{"name":"sensitive to tacrolimus during salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001749"}


id: PBO:0068746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 1","termid":"PBO:0068746"}


id: GO:0052106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms living in intimate contact with a host organism monitors population density by detecting the concentration of small diffusible signal molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete quorum sensing involved in interaction with host (obsolete GO:0052106)","synonyms":[{"name":"quorum sensing during interaction with host","type":"related"}],"termid":"GO:0052106"}


id: MONDO:0030989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 53","secondary_identifiers":["OMIM:619258","MEDGEN:1787013","UMLS:C5543253","DOID:0112279"],"synonyms":[{"name":"SPGF53","type":"exact"},{"name":"spermatogenic failure 53","type":"exact"}],"termid":"MONDO:0030989","xrefs":{"Monarch":{"xref_id":"0030989"}}}


id: PBO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Pab1","termid":"PBO:0000414"}


id: MOD:00503
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis-delta 5)-tetradecaenoylglycine.","definition_xrefs":["PubMed:6436247","PubMed:7543369","PubMed:1386601","PubMed:11955008","OMSSA:78","Unimod:134#G","RESID:AA0059#var","PubMed:1326520","PubMed:11955007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(cis-delta 5)-tetradecaenoylglycine","synonyms":[{"name":"(cis-delta 5)-tetradecaenoyl","type":"related"},{"name":"Myristoleyl","type":"related"},{"name":"N-(C14:1 aliphatic acyl)glycine","type":"exact"},{"name":"myristoleylation (one double bond)","type":"exact"},{"name":"ntermpepmyristoyeylationg","type":"exact"}],"termid":"MOD:00503"}


id: PBO:0072584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 7 homolog A","termid":"PBO:0072584"}


id: PBO:0056611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 3","termid":"PBO:0056611"}


id: GO:0033558
data:
  {"annotated_genes":["SJAG_04186","SJAG_03627","SJAG_03844","SJAG_00581","SJAG_04039","SJAG_01075"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109795,64108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[90379,104510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[104511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[90380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[109796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[104512,114753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[109797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[109798,97539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[77668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[109799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[109800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: Removal of an acetyl group from a lysine residue in a protein.","definition_xrefs":["PMID:27296530","RHEA:58108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_01075":null,"SJAG_03627":null,"SJAG_03844":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0019213","GO:0140096"],"is_obsolete":false,"name":"protein lysine deacetylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9701565","Reactome:R-HSA-8952069","Reactome:R-HSA-9825772","Reactome:R-HSA-5693092","Reactome:R-HSA-9841847","Reactome:R-HSA-9626962"],"synonyms":[{"name":"protein deacetylase activity","type":"exact"}],"termid":"GO:0033558","terms_by_termid":{"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0034739":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null,"GO:0140937":null,"GO:0141222":null,"GO:0180032":null,"GO:0180033":null}}


id: PBO:0075821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS nuclear autoantigen 1","termid":"PBO:0075821"}


id: PBO:0038337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_autoimmune_trigger","termid":"PBO:0038337"}


id: GO:1903618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transdifferentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22118091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"transdifferentiation","termid":"GO:0060290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transdifferentiation","termid":"GO:1903618"}


id: PR:Q92374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssb3 gene.","definition_xrefs":["UniProtKB:Q92374","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor A protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.05c","synonyms":[{"name":"Spom972h-ssb3","type":"exact"},{"name":"single-stranded DNA-binding protein P12 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92374"}


id: MONDO:0021035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia - intellectual disability syndrome","termid":"MONDO:0008756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia-intellectual disability syndrome 1","secondary_identifiers":["UMLS:C1859878","MEDGEN:349263","OMIM:203650","DOID:0080628"],"synonyms":[{"name":"APMR","type":"broad"},{"name":"APMR1","type":"exact"},{"name":"alopecia-intellectual disability syndrome 1","type":"exact"},{"name":"alopecia-mental retardation syndrome 1","type":"exact"}],"termid":"MONDO:0021035","xrefs":{"Monarch":{"xref_id":"0021035"}}}


id: PBO:0049858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECW1 intronic transcript 1","termid":"PBO:0049858"}


id: PR:P50524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpn12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.01","synonyms":[{"name":"Spom972h-rpn12","type":"exact"}],"termid":"PR:P50524"}


id: PR:O94271
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RING finger protein 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P8B7.23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.23","secondary_identifiers":["UniProtKB:O94271"],"synonyms":[{"name":"Spom972h-RNF10","type":"exact"}],"termid":"PR:O94271"}


id: GO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein autoubiquitination","synonyms":[{"name":"protein auto-ubiquitination","type":"exact"},{"name":"protein auto-ubiquitinylation","type":"exact"},{"name":"protein autoubiquitinylation","type":"exact"},{"name":"protein self-ubiquitination","type":"exact"},{"name":"protein self-ubiquitinylation","type":"exact"}],"termid":"GO:0051865"}


id: PBO:0088381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal 5'-phosphate synthase (glutamine hydrolysing)","termid":"PBO:0088381"}


id: PBO:0034265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_biological_homology_relationship_with","termid":"PBO:0034265"}


id: PBO:0108918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component like 4 (pseudogene)","termid":"PBO:0108918"}


id: GO:0030127
data:
  {"annotated_genes":["SJAG_00072","SJAG_00284","SJAG_03558","SJAG_02349","SJAG_03907","SJAG_05344","SJAG_00906","SJAG_05345","SJAG_03153","SJAG_02539"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71677,71707,73379,75142,75373,76001,76823,77412,78757,95833],"is_not":false,"summary":null,"term":"GO:0030127"}]},"cv_name":"cellular_component","definition":"One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state.","definition_xrefs":["GOC:ascb_2009","GOC:mah","GOC:tb","PMID:11252894","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle coat","termid":"GO:0030120"},{"relation_name":"part_of","term_name":"ER to Golgi transport vesicle membrane","termid":"GO:0012507"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00906":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"COPII vesicle coat","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030127","terms_by_termid":{"GO:0030127":null}}


id: FYECO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A temperature at which a conditional (heat- or cold-sensitive) mutant does not grow.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restrictive temperature","synonyms":[{"name":"non-permissive temperature","type":"exact"},{"name":"nonpermissive temperature","type":"exact"}],"termid":"FYECO:0000229"}


id: MONDO:0013991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital leptin deficiency is a form of monogenic obesity characterized by severe early-onset obesity and marked hyperphagia.","definition_xrefs":["Orphanet:66628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"inherited obesity","termid":"MONDO:0019182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity due to congenital leptin deficiency","secondary_identifiers":["UMLS:C3554224","GARD:13015","icd11.foundation:591009309","MEDGEN:767138","NORD:110641","OMIM:614962","DOID:0111334"],"synonyms":[{"name":"Congenital Leptin Deficiency","type":"exact"},{"name":"LEPD","type":"related"},{"name":"leptin deficiency or dysfunction","type":"related"},{"name":"obesity, morbid, due to leptin deficiency","type":"exact"},{"name":"obesity, morbid, nonsyndromic 1","type":"related"}],"termid":"MONDO:0013991","xrefs":{"Monarch":{"xref_id":"0013991"}}}


id: GO:0036366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The release of transforming growth factor beta 3 (TGF-beta3) from its latent state.","definition_xrefs":["PMID:9170210","GOC:sl","PMID:12482908"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta3 activation (obsolete GO:0036366)","synonyms":[{"name":"TGF-beta 3 activation","type":"exact"},{"name":"TGFB3 activation","type":"exact"},{"name":"TGFbeta 3 activation","type":"exact"}],"termid":"GO:0036366"}


id: GO:0052903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(1)-acetylspermine + O2 = 3-acetamidopropanal + H2O2 + spermidine. Also converts N(1)-acetylspermidine to putrescine.","definition_xrefs":["EC:1.5.3.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"N(1)-acetylpolyamine oxidase (3-acetamidopropanal-forming) activity","secondary_identifiers":["KEGG_REACTION:R03899","MetaCyc:RXN-12090"],"synonyms":[{"name":"N(1)-acetylpolyamine oxidase activity","type":"broad"},{"name":"N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity","type":"narrow"},{"name":"N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity","type":"narrow"},{"name":"https://github.com/geneontology/go-ontology/issues/28070","type":"narrow"}],"termid":"GO:0052903"}


id: GO:0039608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus prevents or reduces the frequency, rate or extent of activity of a host translation initiation factor by promoting dephosphorylation of a host protein.","definition_xrefs":["PMID:8643618","PMID:12239292"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host translation initiation factor activity by induction of host protein dephosphorylation (obsolete GO:0039608)","termid":"GO:0039608"}


id: GO:1900293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of galactotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of galactotriose transport","termid":"GO:1900291"},{"relation_name":"positively_regulates","term_name":"galactotriose transport","termid":"GO:2001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of galactotriose transport","synonyms":[{"name":"activation of galactotriose transport","type":"narrow"},{"name":"up regulation of galactotriose transport","type":"exact"},{"name":"up-regulation of galactotriose transport","type":"exact"},{"name":"upregulation of galactotriose transport","type":"exact"}],"termid":"GO:1900293"}


id: MONDO:0040699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of scleritis with subtypes: necrotising zonal granulomatous inflammation, diffuse non-granulomatous chronic inflammation, mixed pattern of acute purulent inflammation mixed with granulomatous inflammation and sarcoidal pattern.","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"necrotizing scleritis","secondary_identifiers":["MEDGEN:6542","UMLS:C0027547","ICD9:379.09","SCTID:95797003"],"termid":"MONDO:0040699","xrefs":{"Monarch":{"xref_id":"0040699"}}}


id: PBO:0082031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein, minor isoform; controls proteome at post-transcriptional level, binds proteins and DNA, involved in regulation of many processes including exocytosis, vesicle transport, Ras/MAPK signaling, and rapamycin-sensitive signaling; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; abundance relative to Bmh1p increases during sporulation","termid":"PBO:0082031"}


id: MONDO:1012121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypothyroidism, non-human animal","termid":"MONDO:1011678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypothyroidism, dog","secondary_identifiers":["OMIA:000538-9615"],"termid":"MONDO:1012121","xrefs":{"Monarch":{"xref_id":"1012121"}}}


id: PBO:0060177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 pseudogene 1","termid":"PBO:0060177"}


id: PBO:0078259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable B (pseudogene)","termid":"PBO:0078259"}


id: PBO:0047743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 7","termid":"PBO:0047743"}


id: MONDO:0007775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypersecretion of adrenal androgens, familial","secondary_identifiers":["MEDGEN:326725","OMIM:145295","MESH:C536845","UMLS:C1840387"],"synonyms":[{"name":"familial hypersecretion of adrenal androgens","type":"related"},{"name":"hypersecretion of adrenal androgens, familial","type":"exact"}],"termid":"MONDO:0007775","xrefs":{"Monarch":{"xref_id":"0007775"}}}


id: PBO:0049464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin B (MNS blood group)","termid":"PBO:0049464"}


id: PBO:0113075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cu(+2)-transporting P-type ATPase; required for export of copper from cytosol into extracytosolic compartment; targeted to vacuole via AP-3 pathway; similar to human proteins involved in Menkes and Wilsons diseases; protein abundance increases in response to DNA replication stress; affects TBSV model (+)RNA virus replication by regulating copper metabolism; human homologs ATP7A and ATP7B both complement yeast null mutant","termid":"PBO:0113075"}


id: MONDO:0957318
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86821,86820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020722"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis","termid":"MONDO:0008171"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrolithiasis, calcium oxalate","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1833683","MEDGEN:318935","OMIMPS:167030"],"termid":"MONDO:0957318","terms_by_termid":{"MONDO:0020722":null},"xrefs":{"Monarch":{"xref_id":"0957318"}}}


