# terms

id: GO:1901068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanosine-containing compounds (guanosines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanosine-containing compound metabolic process","synonyms":[{"name":"guanosine-containing compound metabolism","type":"exact"},{"name":"guanosines metabolic process","type":"exact"},{"name":"guanosines metabolism","type":"exact"}],"termid":"GO:1901068"}


id: GO:0038118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a the C-C chemokine type 7 receptor on the surface of a cell binding to one of it's physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:15059845","GOC:signaling","PMID:15778365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"C-C chemokine receptor CCR7 signaling pathway","synonyms":[{"name":"C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"CCR7 signaling pathway","type":"related"}],"termid":"GO:0038118"}


id: GO:0001989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as part of the baroreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0721643949"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of the force of heart contraction involved in baroreceptor response to decreased systemic arterial blood pressure (obsolete GO:0001989)","synonyms":[{"name":"increased force of heart contraction during baroreceptor response to decreased systemic arterial blood pressure","type":"related"},{"name":"increased strength of cardiac contraction during baroreceptor response to decreased blood pressure","type":"related"},{"name":"positive regulation of the force of heart contraction during baroreceptor response to decreased systemic arterial blood pressure","type":"related"}],"termid":"GO:0001989"}


id: PBO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.7","termid":"PBO:0005542"}


id: PBO:0061752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2","termid":"PBO:0061752"}


id: GO:1904798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of core promoter binding.","definition_xrefs":["GOC:BHF_telomere","PMID:22723415","GOC:TermGenie","GO_REF:0000059","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription regulatory region DNA binding","termid":"GO:2000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of core promoter binding","synonyms":[{"name":"activation of core promoter binding","type":"narrow"},{"name":"up regulation of core promoter binding","type":"exact"},{"name":"up-regulation of core promoter binding","type":"exact"},{"name":"upregulation of core promoter binding","type":"exact"}],"termid":"GO:1904798"}


id: GO:0031067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the removal of acetyl groups to histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylation at centromere (obsolete GO:0031067)","synonyms":[{"name":"down regulation of histone deacetylation at centromere","type":"exact"},{"name":"down-regulation of histone deacetylation at centromere","type":"exact"},{"name":"downregulation of histone deacetylation at centromere","type":"exact"},{"name":"inhibition of histone deacetylation at centromere","type":"narrow"}],"termid":"GO:0031067"}


id: GO:1902063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of betaine aldehyde.","definition_xrefs":["PMID:23563483","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"betaine aldehyde metabolic process","termid":"GO:1902061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"betaine aldehyde biosynthetic process","synonyms":[{"name":"betaine aldehyde anabolism","type":"exact"},{"name":"betaine aldehyde biosynthesis","type":"exact"},{"name":"betaine aldehyde formation","type":"exact"},{"name":"betaine aldehyde synthesis","type":"exact"}],"termid":"GO:1902063"}


id: GO:0019031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer of a virion that surrounds the protein capsid. May also contain glycoproteins.","definition_xrefs":["GOC:bf","GOC:bm","GOC:jl","ISBN:0781718325","Wikipedia:Viral_envelope"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral membrane","termid":"GO:0036338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral envelope","synonyms":[{"name":"viral glycoprotein","type":"related"},{"name":"viral outside membrane","type":"exact"}],"termid":"GO:0019031"}


id: PBO:0070890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 22","termid":"PBO:0070890"}


id: GO:0052391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of a flux of calcium ions that occurs as part of the defense response of a host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host calcium ion flux (obsolete GO:0052391)","synonyms":[{"name":"activation by organism of host Ca2+ flux","type":"exact"},{"name":"activation by organism of host calcium ion flux","type":"exact"},{"name":"activation by symbiont of defense-related host calcium ion flux","type":"exact"},{"name":"induction by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by organism of host Ca2+ flux","type":"exact"},{"name":"positive regulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense-related host Ca2+ flux","type":"related"},{"name":"positive regulation by symbiont of defense-related host calcium ion flux","type":"related"},{"name":"stimulation by symbiont of defense-related host calcium ion flux","type":"related"},{"name":"up regulation by symbiont of defense-related host calcium ion flux","type":"related"},{"name":"up-regulation by symbiont of defense-related host calcium ion flux","type":"related"},{"name":"upregulation by symbiont of defense-related host calcium ion flux","type":"related"}],"termid":"GO:0052391"}


id: GO:0006061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbitol metabolic process","termid":"GO:0006060"},{"relation_name":"is_a","term_name":"hexitol biosynthetic process","termid":"GO:0019406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"sorbitol biosynthetic process","synonyms":[{"name":"sorbitol anabolism","type":"exact"},{"name":"sorbitol biosynthesis","type":"exact"},{"name":"sorbitol formation","type":"exact"},{"name":"sorbitol synthesis","type":"exact"}],"termid":"GO:0006061"}


id: FYPO:0009090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of sodium chloride and sodium dodecyl sulfate. Cells stop growing (and may die) at concentrations of sodium chloride and sodium dodecyl sulfate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to sodium chloride and sodium dodecyl sulfate","synonyms":[{"name":"hypersensitive to sodium chloride and SDS","type":"exact"},{"name":"hypersensitive to sodium chloride and sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to sodium chloride and SDS","type":"exact"},{"name":"sensitive to sodium chloride and SDS during vegetative growth","type":"exact"},{"name":"sensitive to sodium chloride and SDS in combination","type":"exact"},{"name":"sensitive to sodium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to sodium chloride and sodium dodecyl sulfate in combination","type":"exact"}],"termid":"FYPO:0009090"}


id: MONDO:0003706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adult astrocytic tumor","termid":"MONDO:0002503"},{"relation_name":"is_a","term_name":"adult brainstem glioma","termid":"MONDO:0003153"},{"relation_name":"is_a","term_name":"brain stem astrocytic neoplasm","termid":"MONDO:0003173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult brainstem astrocytoma","secondary_identifiers":["MEDGEN:233962","DOID:5922","NCIT:C6954","UMLS:C1332191"],"synonyms":[{"name":"adult brain stem astrocytoma","type":"exact"},{"name":"adult brainstem astrocytoma","type":"exact"}],"termid":"MONDO:0003706","xrefs":{"Monarch":{"xref_id":"0003706"}}}


id: GO:1904592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein refolding.","definition_xrefs":["GOC:TermGenie","PMID:11360998","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein refolding","termid":"GO:0061083"},{"relation_name":"is_a","term_name":"positive regulation of protein folding","termid":"GO:1903334"},{"relation_name":"positively_regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006457"},{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein refolding","synonyms":[{"name":"activation of heat shock protein activity","type":"related"},{"name":"activation of protein refolding","type":"narrow"},{"name":"positive regulation of heat shock protein activity","type":"related"},{"name":"up regulation of heat shock protein activity","type":"related"},{"name":"up regulation of protein refolding","type":"exact"},{"name":"up-regulation of heat shock protein activity","type":"related"},{"name":"up-regulation of protein refolding","type":"exact"},{"name":"upregulation of heat shock protein activity","type":"related"},{"name":"upregulation of protein refolding","type":"exact"}],"termid":"GO:1904592"}


id: GO:1902917
data:
  {"annotated_genes":["SJAG_02379","SJAG_04509","SJAG_00514","SJAG_03453","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88213,90191,91172,93804,111694],"is_not":false,"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating projection assembly.","definition_xrefs":["PMID:12455985","GOC:di","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating projection assembly","termid":"GO:0031383"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"part_of","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"positively_regulates","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of mating projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mating projection assembly","type":"narrow"},{"name":"activation of mating projection biogenesis","type":"related"},{"name":"positive regulation of mating projection biogenesis","type":"related"},{"name":"up regulation of mating projection assembly","type":"exact"},{"name":"up regulation of mating projection biogenesis","type":"related"},{"name":"up-regulation of mating projection assembly","type":"exact"},{"name":"up-regulation of mating projection biogenesis","type":"related"},{"name":"upregulation of mating projection assembly","type":"exact"},{"name":"upregulation of mating projection biogenesis","type":"related"}],"termid":"GO:1902917","terms_by_termid":{"GO:1902917":null}}


id: PBO:0066765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 63","termid":"PBO:0066765"}


id: FYPO:0000869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation occurs to a greater extent than normal. All histone methylation may be affected, or methylation of specific sites on specific histones may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone methylation during vegetative growth","synonyms":[{"name":"increased histone methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000869"}


id: GO:0102317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(methylamino)butyric acid + O2 + H2O = gamma-aminobutyric acid + formaldehyde + hydrogen peroxide.","definition_xrefs":["GOC:pz","EC:1.5.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-methylaminobutyrate oxidase (demethylating) activity","secondary_identifiers":["RHEA:33907","MetaCyc:RXN-13067"],"termid":"GO:0102317"}


id: MONDO:0011937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peeling skin syndrome in which the cause of the disease is a mutation in the CSTA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exfoliative ichthyosis","termid":"MONDO:0017339"},{"relation_name":"is_a","term_name":"peeling skin syndrome","termid":"MONDO:0019347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"peeling skin syndrome 4","secondary_identifiers":["MEDGEN:895692","GARD:18426","MESH:C564309","OMIM:607936","DOID:0070523","UMLS:C4225407"],"synonyms":[{"name":"CSTA peeling skin syndrome","type":"exact"},{"name":"PSS4","type":"related"},{"name":"ichthyosis bullosa of Siemens-like","type":"related"},{"name":"ichthyosis, exfoliative, autosomal recessive","type":"related"},{"name":"peeling skin syndrome 4","type":"exact"},{"name":"peeling skin syndrome caused by mutation in CSTA","type":"exact"},{"name":"peeling skin syndrome type 4","type":"exact"}],"termid":"MONDO:0011937","xrefs":{"Monarch":{"xref_id":"0011937"}}}


id: GO:0009470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class IIa cytochrome c (obsolete GO:0009470)","synonyms":[{"name":"class IIa cytochrome c","type":"exact"}],"termid":"GO:0009470"}


id: GO:0005020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with stem cell factor (SCF) receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate. Stem cell factor is a cytokine that stimulates mast cell growth and differentiation.","definition_xrefs":["PMID:10698217","GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0003824","GO:0004672","GO:0003674","GO:0016740","GO:0038023"],"is_obsolete":false,"name":"stem cell factor receptor activity","synonyms":[{"name":"KIT","type":"related"},{"name":"KIT ligand receptor activity","type":"exact"},{"name":"KL receptor activity","type":"exact"},{"name":"SCF receptor activity","type":"exact"}],"termid":"GO:0005020"}


id: PBO:0062030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily S member 1 pseudogene","termid":"PBO:0062030"}


id: GO:0017119
data:
  {"annotated_genes":["SJAG_01071","SJAG_00041","SJAG_01459","SJAG_03054","SJAG_02211","SJAG_03158","SJAG_00578"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69964,70694,75661,77690,89284,109816,117161],"is_not":false,"summary":null,"term":"GO:0017119"}]},"cv_name":"cellular_component","definition":"A multisubunit tethering complex of the CATCHR family (complexes associated with tethering containing helical rods) that has a role in tethering vesicles to the Golgi prior to fusion. Composed of 8 subunits COG1-8.","definition_xrefs":["PMID:11980916","PMID:20972446","GOC:krc","PMID:9792665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00578":null,"SJAG_01071":null,"SJAG_01459":null,"SJAG_02211":null,"SJAG_03054":null,"SJAG_03158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005794","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Golgi transport complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COG complex","type":"exact"},{"name":"Sec34/35 complex","type":"narrow"},{"name":"conserved oligomeric Golgi complex","type":"exact"}],"termid":"GO:0017119","terms_by_termid":{"GO:0017119":null}}


id: MONDO:0012664
data:
  {"annotated_genes":["SJAG_16456"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85817],"is_not":false,"summary":null,"term":"MONDO:0012664"}]},"cv_name":"mondo","definition":"Any autosomal recessive spastic ataxia in which the cause of the disease is a mutation in the MARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"autosomal recessive spastic ataxia","termid":"MONDO:0017847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0006025"],"is_obsolete":false,"name":"spastic ataxia 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C566956","Orphanet:314603","OMIM:611390","MEDGEN:370715","DOID:0050942","ICD10CM:G11.4","UMLS:C1969645","GARD:17425"],"synonyms":[{"name":"ARSAL","type":"exact"},{"name":"MARS2 autosomal recessive spastic ataxia","type":"exact"},{"name":"SPAX3","type":"exact"},{"name":"autosomal recessive spastic ataxia caused by mutation in MARS2","type":"exact"},{"name":"autosomal recessive spastic ataxia type 3","type":"exact"},{"name":"autosomal recessive spastic ataxia with leukoencephalopathy","type":"related"},{"name":"spastic ataxia 3, autosomal recessive","type":"related"},{"name":"spastic ataxia type 3","type":"exact"}],"termid":"MONDO:0012664","terms_by_termid":{"MONDO:0012664":null},"xrefs":{"Monarch":{"xref_id":"0012664"}}}


id: PBO:0087750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the TIM23 translocase complex; acts to couple Tim21p with the core Tim23 translocase; provides quality control for insertion of membrane proteins by regulating their release into the inner membrane by the TIM23 complex; absolutely required for mitochondrial import of presequence-containing proteins at elevated temperature; required for viability of cells lacking the mitochondrial genome (petite-negative phenotype)","termid":"PBO:0087750"}


id: GO:0035107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appendage morphogenesis","termid":"GO:0035107"}


id: GO:0060109
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fluid-filled cuticle layer that lies between the cortical and basal layers and is characterized by the presence of regularly spaced columnar struts that lie on either side of the annular furrows and link the two surrounding layers. In C. elegans, a defined medial layer is found only in adult animals.","definition_xrefs":["ISSN:15518507","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cuticular extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"medial layer of collagen and cuticulin-based cuticle extracellular matrix","synonyms":[{"name":"medial layer struts","type":"related"}],"termid":"GO:0060109"}


id: PBO:0051822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRF1 antisense RNA 1","termid":"PBO:0051822"}


id: GO:0030323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory tube development","termid":"GO:0030323"}


id: PBO:0081008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB44 divergent transcript","termid":"PBO:0081008"}


id: PBO:0056685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 9","termid":"PBO:0056685"}


id: PBO:0116974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADORA1 antisense RNA 2","termid":"PBO:0116974"}


id: RO:HOM0000027
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Iterative homology that involves structures arranged along the main body axis.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_iterative_homology_relationship_with","termid":"RO:HOM0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_serial_homology_relationship_with","synonyms":[{"name":"homonomy","type":"related"},{"name":"serial homologous to","type":"exact"}],"termid":"RO:HOM0000027"}


id: GO:0102099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,9-dihydro-1H-purine-2,6,8(3H)-trione + NADH + H+ + O2 = 5-hydroxyisouric acid + NAD + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"FAD-dependent urate hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11186","RHEA:27329"],"termid":"GO:0102099"}


id: MONDO:0009288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of glycogenosis due to G6P deficiency.","definition_xrefs":["Orphanet:79259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"},{"relation_name":"is_a","term_name":"glycogen storage disease type 1 due to SLC37A4 mutation","termid":"MONDO:0023258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease Ib","secondary_identifiers":["SCTID:237965005","OMIM:232240","NANDO:2201154","MEDGEN:78644","OMIM:232220","NCIT:C122661","NANDO:1200841","SCTID:30102006","MESH:C562594","UMLS:C0268146","GARD:2515","NANDO:2200754","DOID:0081330","DOID:0081331"],"synonyms":[{"name":"G6P deficiency type IB","type":"exact"},{"name":"G6P translocase deficiency","type":"exact"},{"name":"G6PT deficiency","type":"exact"},{"name":"GSD Ib","type":"exact"},{"name":"GSD Ic","type":"related"},{"name":"GSD due to G6P deficiency type IB","type":"exact"},{"name":"GSD due to G6PT deficiency","type":"exact"},{"name":"GSD type 1 non a","type":"exact"},{"name":"GSD type 1b","type":"exact"},{"name":"GSD type IB","type":"exact"},{"name":"GSD1B","type":"exact"},{"name":"GSD1C","type":"related"},{"name":"GSDIb","type":"exact"},{"name":"Gsd1C","type":"related"},{"name":"glucose-6-phosphate transport defect","type":"exact"},{"name":"glycogen storage disease Ib","type":"exact"},{"name":"glycogen storage disease Ic","type":"exact"},{"name":"glycogen storage disease due to G6P deficiency type IB","type":"exact"},{"name":"glycogen storage disease type 1b","type":"exact"},{"name":"glycogen storage disease type I non-a","type":"exact"},{"name":"glycogen storage disease type IB","type":"exact"},{"name":"glycogen storage disease type Ic","type":"exact"},{"name":"glycogenosis due to glucose-6-phosphatase deficiency type 1B","type":"exact"},{"name":"glycogenosis due to glucose-6-phosphatase transport defect type IB","type":"exact"},{"name":"glycogenosis type 1b","type":"exact"},{"name":"glycogenosis type IB","type":"exact"}],"termid":"MONDO:0009288","xrefs":{"Monarch":{"xref_id":"0009288"}}}


id: GO:0060192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of lipase activity, the hydrolysis of a lipid or phospholipid.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipase activity","termid":"GO:0060192"}


id: MONDO:0010443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"RPGR-related retinopathy","termid":"MONDO:0100437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular degeneration, X-linked atrophic","secondary_identifiers":["MEDGEN:463134","OMIM:300834","GARD:15268","UMLS:C3151784","DOID:0112157"],"synonyms":[{"name":"macular degeneration, X-linked atrophic","type":"exact"},{"name":"macular degeneration, X-linked atrophic, X-linked recessive","type":"exact"}],"termid":"MONDO:0010443","xrefs":{"Monarch":{"xref_id":"0010443"}}}


id: MONDO:0013302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nephronophthisis that has material basis in homozygous or compound heterozygous mutation in the TMEM67 gene on chromosome 8q22.1.","definition_xrefs":["DOID:0111118","PMID:19508969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"},{"relation_name":"is_a","term_name":"Senior-Boichis syndrome","termid":"MONDO:0019394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis 11","secondary_identifiers":["GARD:18080","MEDGEN:462146","UMLS:C3150796","OMIM:613550"],"synonyms":[{"name":"NPHP11","type":"exact"},{"name":"nephronophthisis 11","type":"exact"},{"name":"nephronophthisis type 11","type":"exact"}],"termid":"MONDO:0013302","xrefs":{"Monarch":{"xref_id":"0013302"}}}


id: MONDO:1011158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis that occurs in sea otter.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis, non-human animal","termid":"MONDO:1010297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, sea otter","secondary_identifiers":["OMIA:000747-34882"],"termid":"MONDO:1011158","xrefs":{"Monarch":{"xref_id":"1011158"}}}


id: GO:0102904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = germacrene C + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"germacrene C synthase activity","secondary_identifiers":["RHEA:28302","MetaCyc:RXN-8561"],"termid":"GO:0102904"}


id: GO:0072335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin involved in neural crest cell differentiation. The Wnt signaling pathway is the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of canonical Wnt signaling pathway involved in neural crest cell differentiation (obsolete GO:0072335)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway through beta-catenin involved in neural crest cell differentiation","type":"exact"},{"name":"regulation of canonical Wnt receptor signaling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway involved in neural crest cell differentiation","type":"exact"}],"termid":"GO:0072335"}


id: GO:1903145
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any actin filament that is part of a cell cortex of cell tip.","definition_xrefs":["GO_REF:0000064","PMID:20807799","GOC:TermGenie","PMID:24954052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament","termid":"GO:0005884"},{"relation_name":"part_of","term_name":"cell cortex of cell tip","termid":"GO:0051285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin filament of cell cortex of cell tip","synonyms":[{"name":"actin filament of cell cortex of cell end","type":"exact"},{"name":"microfilament of cell cortex of cell end","type":"exact"},{"name":"microfilament of cell cortex of cell tip","type":"exact"}],"termid":"GO:1903145"}


id: GO:0060509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a type I pneumocyte. A type I pneumocyte is a flattened cell with greatly attenuated cytoplasm and a paucity of organelles.","definition_xrefs":["GOC:mtg_lung","GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelial cell differentiation","termid":"GO:0060487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type I pneumocyte differentiation","synonyms":[{"name":"membranous pneumocyte differentiation","type":"exact"},{"name":"small alveolar cell differentiation","type":"related"},{"name":"squamous alveolar cell differentiation","type":"related"}],"termid":"GO:0060509"}


id: PBO:0070720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 25","termid":"PBO:0070720"}


id: GO:0045902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the ability of the translational apparatus to interpret the genetic code.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational fidelity","termid":"GO:0006450"},{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translational fidelity","synonyms":[{"name":"down regulation of translational fidelity","type":"exact"},{"name":"down-regulation of translational fidelity","type":"exact"},{"name":"downregulation of translational fidelity","type":"exact"},{"name":"inhibition of translational fidelity","type":"narrow"}],"termid":"GO:0045902"}


id: PBO:0027808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_KT5720","termid":"PBO:0027808"}


id: FYPO:0000212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to heat is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular response to heat","synonyms":[{"name":"abnormal cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0000212"}


id: MONDO:0016770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Actinic lichen planus (LP) is a rare variant of cutaneous lichen planus characterized by the development of photo-distributed lichenoid lesions.","definition_xrefs":["Orphanet:254395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"actinic lichen planus","secondary_identifiers":["SCTID:200999007","UMLS:C0406365","GARD:12673","icd11.foundation:365229579","MEDGEN:590348"],"synonyms":[{"name":"actinic LP","type":"exact"},{"name":"lichen planus actinus","type":"exact"},{"name":"lichen planus subtropicus","type":"exact"},{"name":"lichen planus tropicus","type":"exact"},{"name":"lichenoid melanodermatitis","type":"exact"},{"name":"summertime actinic lichenoid eruption","type":"exact"}],"termid":"MONDO:0016770","xrefs":{"Monarch":{"xref_id":"0016770"}}}


id: GO:0052313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of nutrient release from other organism involved in symbiotic interaction (obsolete GO:0052313)","synonyms":[{"name":"modulation of nutrient release from other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052313"}


id: PBO:0030722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_phosphatidylinositol-4-phosphate_level","termid":"PBO:0030722"}


id: PBO:0069756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1039, pseudogene","termid":"PBO:0069756"}


id: PBO:0077889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p63 regulated 1 like","termid":"PBO:0077889"}


id: GO:0044206
data:
  {"annotated_genes":["SJAG_03708","SJAG_04713","SJAG_04354","SJAG_00533","SJAG_04709"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68204,87779,88771,92293,93296],"is_not":false,"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"Any process which produces UMP, uridine monophosphate, from derivatives of it (e.g. cytidine, uridine, cytosine) without de novo synthesis.","definition_xrefs":["PMID:15096496","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP biosynthetic process","termid":"GO:0006222"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide salvage","termid":"GO:0010138"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UMP salvage","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"UMP biosynthesis via nucleoside salvage pathway","type":"exact"},{"name":"UMP biosynthetic process via nucleoside salvage pathway","type":"exact"}],"termid":"GO:0044206","terms_by_termid":{"GO:0044206":null}}


id: PBO:0059428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardin related transcription factor B","termid":"PBO:0059428"}


id: GO:0006649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of a phospholipid from its site of synthesis to the plasma membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"part_of","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phospholipid transfer to membrane","termid":"GO:0006649"}


id: MONDO:0044628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"six2-related frontonasal dysplasia","secondary_identifiers":["MEDGEN:1798907","GARD:22001","UMLS:C5567484","Orphanet:488437"],"synonyms":[{"name":"SIX2-related FND","type":"exact"}],"termid":"MONDO:0044628","xrefs":{"Monarch":{"xref_id":"0044628"}}}


id: PBO:0088597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific mitotic metaphase/anaphase APC coactivator Slp1/Cdc20","termid":"PBO:0088597"}


id: GO:0099182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The intermediate filament cytoskeleton that is part of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton","termid":"GO:0045111"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic intermediate filament cytoskeleton","termid":"GO:0099182"}


id: GO:1901095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein homotetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein homooligomerization","termid":"GO:0032464"},{"relation_name":"is_a","term_name":"positive regulation of protein tetramerization","termid":"GO:1901092"},{"relation_name":"is_a","term_name":"regulation of protein homotetramerization","termid":"GO:1901093"},{"relation_name":"positively_regulates","term_name":"protein homotetramerization","termid":"GO:0051289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"positive regulation of protein homotetramerization","synonyms":[{"name":"activation of protein homotetramer assembly","type":"narrow"},{"name":"activation of protein homotetramer biosynthesis","type":"narrow"},{"name":"activation of protein homotetramer biosynthetic process","type":"narrow"},{"name":"activation of protein homotetramer formation","type":"narrow"},{"name":"activation of protein homotetramerization","type":"narrow"},{"name":"positive regulation of protein homotetramer assembly","type":"exact"},{"name":"positive regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"positive regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"positive regulation of protein homotetramer formation","type":"exact"},{"name":"up regulation of protein homotetramer assembly","type":"exact"},{"name":"up regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"up regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"up regulation of protein homotetramer formation","type":"exact"},{"name":"up regulation of protein homotetramerization","type":"exact"},{"name":"up-regulation of protein homotetramer assembly","type":"exact"},{"name":"up-regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"up-regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"up-regulation of protein homotetramer formation","type":"exact"},{"name":"up-regulation of protein homotetramerization","type":"exact"},{"name":"upregulation of protein homotetramer assembly","type":"exact"},{"name":"upregulation of protein homotetramer biosynthesis","type":"exact"},{"name":"upregulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"upregulation of protein homotetramer formation","type":"exact"},{"name":"upregulation of protein homotetramerization","type":"exact"}],"termid":"GO:1901095"}


id: GO:0086010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"},{"relation_name":"part_of","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during action potential","termid":"GO:0086010"}


id: GO:0021824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of cerebral cortex neuronal precursors tangentially through the cortex using interaction of the migrating cells with axons of other neurons.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","PMID:12626695","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex tangential migration using cell-axon interactions","termid":"GO:0021824"}


id: MONDO:0013846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripartum cardiomyopathy, susceptibility to","secondary_identifiers":["MEDGEN:766320","OMIM:614670","UMLS:C3553406"],"synonyms":[{"name":"Ppcm, susceptibility to","type":"related"},{"name":"peripartum cardiomyopathy, susceptibility to","type":"exact"}],"termid":"MONDO:0013846","xrefs":{"Monarch":{"xref_id":"0013846"}}}


id: PBO:0052006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jun dimerization protein 2","termid":"PBO:0052006"}


id: GO:0033394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-alanine via the intermediate 1,3 diaminopropane.","definition_xrefs":["GOC:mah","MetaCyc:PWY-3981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-alanine biosynthetic process","termid":"GO:0019483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"beta-alanine biosynthetic process via 1,3 diaminopropane","synonyms":[{"name":"beta-alanine anabolism via 1,3 diaminopropane","type":"exact"},{"name":"beta-alanine biosynthesis via 1,3 diaminopropane","type":"exact"},{"name":"beta-alanine formation via 1,3 diaminopropane","type":"exact"},{"name":"beta-alanine synthesis via 1,3 diaminopropane","type":"exact"}],"termid":"GO:0033394"}


id: PBO:0057796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3119-1","termid":"PBO:0057796"}


id: PBO:0064591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member J","termid":"PBO:0064591"}


id: GO:0035081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by hormones that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death","termid":"GO:0012502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by hormones","termid":"GO:0035081"}


id: PBO:0084818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; similar to Ups1p and Ups2p which are involved in regulation of mitochondrial cardiolipin and phosphatidylethanolamine levels; null is viable but interacts synthetically with ups1 and ups2 mutations; UPS3 has a paralog, UPS2, that arose from the whole genome duplication","termid":"PBO:0084818"}


id: PBO:0056937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-2","termid":"PBO:0056937"}


id: PBO:0038873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase complexing protein 1","termid":"PBO:0038873"}


id: GO:0071932
data:
  {"annotated_genes":["SJAG_03780","SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75937,112852],"is_not":false,"summary":null,"term":"GO:0071932"}]},"cv_name":"biological_process","definition":"Replication fork processing that involves the unwinding of blocked forks to form four-stranded structures resembling Holliday junctions, which are subsequently resolved.","definition_xrefs":["PMID:19406929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork processing","termid":"GO:0031297"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03780":null,"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"replication fork reversal","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0071932","terms_by_termid":{"GO:0071932":null}}


id: PBO:0017046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam12","termid":"PBO:0017046"}


id: MOD:00179
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamyl 5-glycerylphosphorylethanolamine.","definition_xrefs":["PubMed:2569467","PubMed:9662537","RESID:AA0170","Unimod:396#E","PubMed:2511205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamyl 5-glycerylphosphorylethanolamine","synonyms":[{"name":"(S)-2-amino-5-[2-([([2,3-dihydroxypropyl]oxy)(hydroxy)phosphoryl]oxy)ethyl]amino-5-oxopentanoic acid","type":"exact"},{"name":"5-L-glutamyl glycerylphosphorylethanolamine","type":"exact"},{"name":"5GlyceroPEtAGlu","type":"exact"},{"name":"GlycerylPE","type":"related"},{"name":"L-glutamyl 5-glycerophosphoethanolamine","type":"exact"},{"name":"L-glutamyl 5-glycerophosphorylethanolamine","type":"exact"},{"name":"L-glutamyl 5-glycerylphosphorylethanolamine","type":"exact"},{"name":"MOD_RES 5-glutamyl glycerylphosphorylethanolamine","type":"exact"},{"name":"glycerylphosphorylethanolamine","type":"related"}],"termid":"MOD:00179"}


id: PBO:0070483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 18","termid":"PBO:0070483"}


id: GO:0071778
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A SWI/SNF-type complex that directly interacts with the vitamin D receptor (VDR) through the Williams syndrome transcription factor (WSTF), and mediates the recruitment of unliganded VDR to VDR target sites in promoters. The WINAC complex contains at least 13 subunits, including WSTF, several SWI/SNF components, and DNA replication-related factors.","definition_xrefs":["PMID:12837248","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete WINAC complex (obsolete GO:0071778)","synonyms":[{"name":"WINAC complex","type":"exact"}],"termid":"GO:0071778"}


id: PBO:0085058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonessential serine/threonine protein kinase; possible role in DNA damage response; influences tolerance to high levels of ethanol","termid":"PBO:0085058"}


id: PBO:0080602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 36","termid":"PBO:0080602"}


id: PR:O94723
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L20, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.11","synonyms":[{"name":"Spom972h-mrpl20","type":"exact"}],"termid":"PR:O94723"}


id: PBO:0053905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1195","termid":"PBO:0053905"}


id: _global:starts_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_during","secondary_identifiers":["RO:0002091"],"termid":"_global:starts_during"}


id: MONDO:0003958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immature teratoma that arises from the central nervous system and occurs during childhood.","definition_xrefs":["NCIT:C27405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system immature teratoma","termid":"MONDO:0003735"},{"relation_name":"is_a","term_name":"childhood central nervous system germ cell tumor","termid":"MONDO:0003750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood central nervous system immature teratoma","secondary_identifiers":["MEDGEN:232344","DOID:6654","UMLS:C1332954"],"synonyms":[{"name":"central nervous system immature teratoma of childhood","type":"exact"},{"name":"childhood central nervous system immature teratoma","type":"exact"},{"name":"paediatric central nervous system immature teratoma","type":"exact"},{"name":"pediatric central nervous system immature teratoma","type":"exact"}],"termid":"MONDO:0003958","xrefs":{"Monarch":{"xref_id":"0003958"}}}


id: GO:0036034
data:
  {"annotated_genes":["SJAG_03421","SJAG_00973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88535,106020],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001178"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mediator complex. The mediator complex is a protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The Saccharomyces complex contains several identifiable subcomplexes: a head domain comprising Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p; and a regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins.","definition_xrefs":["PMID:17641689","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00973":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"mediator complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036034","terms_by_termid":{"GO:2001178":null}}


id: MONDO:0020118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dense granule disease (obsolete MONDO:0020118)","secondary_identifiers":["icd11.foundation:1930060978","Orphanet:98456"],"synonyms":[{"name":"Delta granule disease","type":"exact"}],"termid":"MONDO:0020118","xrefs":{"Monarch":{"xref_id":"0020118"}}}


id: GO:0110150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of biomineralization (obsolete GO:0110150)","synonyms":[{"name":"negative regulation of biomineral formation","type":"narrow"},{"name":"negative regulation of biomineralisation","type":"exact"},{"name":"negative regulation of mineralisation","type":"exact"},{"name":"negative regulation of mineralization","type":"exact"}],"termid":"GO:0110150"}


id: PBO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf2","termid":"PBO:0002303"}


id: GO:0102883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate = (+)-beta-chamigrene + diphosphate.","definition_xrefs":["RHEA:30379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(+)-beta-chamigrene synthase activity","secondary_identifiers":["MetaCyc:RXN-8424","EC:4.2.3.78"],"termid":"GO:0102883"}


id: PR:O59735
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ceramide synthase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase lac1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.15c","secondary_identifiers":["UniProtKB:O59735"],"synonyms":[{"name":"SPBC3E7.15c","type":"related"},{"name":"Spom972h-CERS2","type":"exact"},{"name":"meiotically up-regulated gene 83 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mug83","type":"related"}],"termid":"PR:O59735"}


id: PBO:0058948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marker of proliferation Ki-67","termid":"PBO:0058948"}


id: MONDO:0033682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"immuno-osseous dysplasia","termid":"MONDO:0015708"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"skeletal dysplasia-T-cell immunodeficiency-developmental delay syndrome","secondary_identifiers":["UMLS:C5567899","GARD:22070","MEDGEN:1799322","Orphanet:508533"],"termid":"MONDO:0033682","xrefs":{"Monarch":{"xref_id":"0033682"}}}


id: PBO:0014569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arp2/3 protein complex, actin-like protein subunit Arp3","termid":"PBO:0014569"}


id: MONDO:0001796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidermodysplasia verruciformis (obsolete MONDO:0001796)","termid":"MONDO:0001796","xrefs":{"Monarch":{"xref_id":"0001796"}}}


id: PBO:0050516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D cluster","termid":"PBO:0050516"}


id: GO:0035680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a posterior lateral line neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell morphogenesis","termid":"GO:0035678"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast hair cell development","termid":"GO:0035677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast hair cell morphogenesis","termid":"GO:0035680"}


id: MOD:01295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to monosodium L-aspartate.","definition_xrefs":["Unimod:30#D","PubMed:12216740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosodium salt","termid":"MOD:00423"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium L-aspartate","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"Na1Asp","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:01295"}


id: FYPO:0003629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spliceosomal tri-snRNP complex assembly is abolished.","definition_xrefs":["PomBase:mah","PMID:12374752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished U2/U5/U6 snRNP complex assembly","synonyms":[{"name":"U2/U5/U6 snRNP complex assembly abolished","type":"exact"},{"name":"abolished U2/U5/U6 snRNP complex assembly during mitotic cell cycle","type":"related"},{"name":"abolished U2/U5/U6 snRNP complex assembly during vegetative growth","type":"exact"},{"name":"abolished U2/U5/U6 tri-snRNP complex assembly abolished","type":"exact"}],"termid":"FYPO:0003629"}


id: GO:0005713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"recombination nodule","termid":"GO:0005713"}


id: RO:HOM0000073
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Synology that results from allopolyploidy.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_ohnology_relationship_with","termid":"RO:HOM0000022"},{"relation_name":"is_a","term_name":"in_synology_relationship_with","termid":"RO:HOM0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homoeology_relationship_with","synonyms":[{"name":"homoeologous to","type":"exact"}],"termid":"RO:HOM0000073"}


id: MONDO:0800464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders including Paget disease of bone (PBD), inclusion body myopathy (IBM), and less frequently frontotemporal dementia (FTD) and amyotrophic lateral sclerosis (ALS). Phenotypic presentation and severity are highly variable, and individuals within the same family may present with different associated conditions.","definition_xrefs":["PMID:33145792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"proteostasis deficiencies","termid":"MONDO:0021179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"SQSTM1-related multisystem proteinopathy","synonyms":[{"name":"SQSTM1-related multisystem proteinopathy","type":"exact"}],"termid":"MONDO:0800464","xrefs":{"Monarch":{"xref_id":"0800464"}}}


id: GO:0034384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"high-density lipoprotein particle clearance","secondary_identifiers":["Reactome:R-HSA-8964011"],"synonyms":[{"name":"HDL clearance","type":"exact"}],"termid":"GO:0034384"}


id: PBO:0064125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin family receptor for egg jelly","termid":"PBO:0064125"}


id: MONDO:0001716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal argyrosis","secondary_identifiers":["DOID:13447","MEDGEN:509793","ICD9:371.16","SCTID:21328003","UMLS:C0155108"],"synonyms":[{"name":"argentous corneal deposits","type":"exact"},{"name":"argyrosis of cornea","type":"exact"}],"termid":"MONDO:0001716","xrefs":{"Monarch":{"xref_id":"0001716"}}}


id: PBO:0058739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6863","termid":"PBO:0058739"}


id: PBO:0004080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin","termid":"PBO:0004080"}


id: PBO:0004555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpr2 (predicted)","termid":"PBO:0004555"}


id: GO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a membrane raft, a small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalizes cellular processes.","definition_xrefs":["PMID:12803918","PMID:16645198","PMID:12648772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft organization","termid":"GO:0031579"},{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane raft assembly","synonyms":[{"name":"lipid raft assembly","type":"exact"},{"name":"lipid raft formation","type":"related"},{"name":"membrane raft formation","type":"related"}],"termid":"GO:0001765"}


id: PBO:0082994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic L-asparaginase, involved in asparagine catabolism; catalyzes hydrolysis of L-asparagine to aspartic acid and ammonia; important enzyme for the treatment of acute lymphoblastic leukemia; has low glutaminase activity and dependence; synthesized constitutively","termid":"PBO:0082994"}


id: PBO:0069559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 831, pseudogene","termid":"PBO:0069559"}


id: PBO:0056779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member A","termid":"PBO:0056779"}


id: PR:O74326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid11 gene.","definition_xrefs":["UniProtKB:O74326","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.06","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid11","type":"exact"},{"name":"caffeine-induced death protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74326"}


id: PBO:0013811
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by G. gallus cdc2","termid":"PBO:0013811"}


id: GO:0015782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of CMP-N-acetylneuraminate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate transmembrane transport","synonyms":[{"name":"CMP-N-acetylneuraminate transport","type":"related"},{"name":"CMP-sialic acid transport","type":"broad"}],"termid":"GO:0015782"}


id: FYPO:0007612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription from STREP promoter","synonyms":[{"name":"decreased transcription from STREP promoter during mitotic cell cycle","type":"related"},{"name":"decreased transcription from STREP promoter during vegetative growth","type":"exact"},{"name":"reduced transcription from STREP promoter","type":"exact"}],"termid":"FYPO:0007612"}


id: MONDO:0006239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant extra-adrenal paraganglioma arising from paraganglia in the head and neck. Representative examples include the carotid body and jugulotympanic paragangliomas.","definition_xrefs":["NCIT:C5327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"head and neck paraganglioma","secondary_identifiers":["UMLS:C1333944","MEDGEN:232588","EFO:1000288"],"synonyms":[{"name":"craniocervical region paraganglioma","type":"exact"},{"name":"head and neck paraganglioma","type":"exact"},{"name":"paraganglioma of craniocervical region","type":"exact"},{"name":"paraganglioma of head and neck","type":"exact"},{"name":"paraganglioma of the head and neck","type":"exact"}],"termid":"MONDO:0006239","xrefs":{"Monarch":{"xref_id":"0006239"}}}


id: MONDO:0100265
data:
  {"annotated_genes":["SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014743"}]},"cv_name":"mondo","definition":"Any peroxisome biogenesis disorder due to PEX5 in which the cause of the disease is a mutation in the PEX7-binding domain of the PEX5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"rhizomelic chondrodysplasia punctata","termid":"MONDO:0015776"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"non-Zellweger spectrum disorder","termid":"MONDO:0100322"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0005559","MONDO:0002525","MONDO:0005244","MONDO:0006025","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX5 defect in the PEX7-binding domain","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"peroxisome biogenesis disorder due to PEX5 defect in the PEX7-binding domain","type":"exact"}],"termid":"MONDO:0100265","terms_by_termid":{"MONDO:0014743":null},"xrefs":{"Monarch":{"xref_id":"0100265"}}}


id: MONDO:0007967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma and neural system tumor syndrome is an extremely rare tumor association characterized by dual predisposition to melanoma and neural system tumors (typically astrocytoma).","definition_xrefs":["Orphanet:252206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma and neural system tumor syndrome","secondary_identifiers":["DOID:0111511","MESH:C536149","MEDGEN:331890","OMIM:155755","SCTID:717968005","GARD:8468","UMLS:C1835042","NCIT:C176905"],"synonyms":[{"name":"melanoma and neural system tumor syndrome","type":"exact"},{"name":"melanoma astrocytoma syndrome","type":"related"},{"name":"melanoma-astrocytoma syndrome","type":"exact"}],"termid":"MONDO:0007967","xrefs":{"Monarch":{"xref_id":"0007967"}}}


id: GO:0010719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial to mesenchymal transition","termid":"GO:0010719"}


id: PBO:0043015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHKB divergent transcript","termid":"PBO:0043015"}


id: MONDO:0033056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic facial cleft (obsolete MONDO:0033056)","secondary_identifiers":["Orphanet:414726"],"termid":"MONDO:0033056","xrefs":{"Monarch":{"xref_id":"0033056"}}}


id: GO:0052135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in host (obsolete GO:0052135)","synonyms":[{"name":"negative aerotaxis within host","type":"exact"}],"termid":"GO:0052135"}


id: PBO:0065238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 6","termid":"PBO:0065238"}


id: PBO:0039536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 36B","termid":"PBO:0039536"}


id: PBO:0057380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548av","termid":"PBO:0057380"}


id: PBO:0042355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD99 molecule (Xg blood group)","termid":"PBO:0042355"}


id: PBO:0073968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 17","termid":"PBO:0073968"}


id: PR:Q53EK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A non-structural maintenance of chromosomes element 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20973:SF0","OMA:SCHPO04590","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosomes element 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.05","secondary_identifiers":["UniProtKB:Q53EK2"],"synonyms":[{"name":"Spom972h-NSMCE1","type":"exact"},{"name":"non-SMC element 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q53EK2"}


id: MONDO:1010291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achondroplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achondroplasia, non-human animal","secondary_identifiers":["OMIA:000004"],"termid":"MONDO:1010291","xrefs":{"Monarch":{"xref_id":"1010291"}}}


id: GO:0102131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADP + a 3R-hydroxyglutaryl-[acp] methyl ester = NADPH + H+ + a 3-oxo-glutaryl-[acp] methyl ester.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-glutaryl-[acp] methyl ester reductase activity (obsolete GO:0102131)","termid":"GO:0102131"}


id: PBO:0084788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; forms heterodimer complex with Mss1p that performs 5-carboxymethylaminomethyl modification of the wobble uridine base in mitochondrial tRNAs; required for respiration in paromomycin-resistant 15S rRNA mutants; human homolog MTO1 can complement yeast null mutant","termid":"PBO:0084788"}


id: PBO:0114390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin WD repeat-containing, dysferlin-like autophagy-related protein Mug65","termid":"PBO:0114390"}


id: GO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction","synonyms":[{"name":"down regulation of tolerance induction","type":"exact"},{"name":"down-regulation of tolerance induction","type":"exact"},{"name":"downregulation of tolerance induction","type":"exact"},{"name":"inhibition of tolerance induction","type":"narrow"}],"termid":"GO:0002644"}


id: PBO:0087286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal transducing MAP kinase kinase; involved in pheromone response where it phosphorylates Fus3p; involved in the pseudohyphal/invasive growth pathway where it phosphorylates of Kss1p; phosphorylated by Ste11p; degraded by ubiquitin pathway","termid":"PBO:0087286"}


id: MONDO:0012285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 2","secondary_identifiers":["OMIM:609470","GARD:15460","MEDGEN:322827","UMLS:C1836118"],"synonyms":[{"name":"LVNC2","type":"exact"},{"name":"left ventricular noncompaction 2","type":"exact"}],"termid":"MONDO:0012285","xrefs":{"Monarch":{"xref_id":"0012285"}}}


id: PBO:0041496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 56","termid":"PBO:0041496"}


id: PBO:0029421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029421"}


id: GO:0036177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a pH stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["Wikipedia:PH","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"},{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}


id: PBO:0064868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26 pseudogene 1","termid":"PBO:0064868"}


id: PBO:0057215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378d-2","termid":"PBO:0057215"}


id: PBO:0042050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 107","termid":"PBO:0042050"}


id: PBO:0030268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_unreplicated_DNA","termid":"PBO:0030268"}


id: FYPO:0000481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic recombination is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic recombination","synonyms":[{"name":"abnormal mitotic recombination during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: abnormal","type":"related"}],"termid":"FYPO:0000481"}


id: GO:0047295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate = 2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate + diphosphate.","definition_xrefs":["PMID:15356000","RHEA:18109","PMID:16494480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"geranylgeranylglycerol-phosphate geranylgeranyltransferase activity","secondary_identifiers":["EC:2.5.1.42","KEGG_REACTION:R04520","MetaCyc:2.5.1.42-RXN"],"synonyms":[{"name":"(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase activity","type":"exact"},{"name":"DGGGP synthase activity","type":"exact"},{"name":"geranylgeranyl diphosphate:sn-3-O-(geranylgeranyl)glycerol 1-phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyloxyglycerol phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyltransferase II","type":"related"}],"termid":"GO:0047295"}


id: PBO:0045583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 5","termid":"PBO:0045583"}


id: PATO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's length being notably lower than its width.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shortened","termid":"PATO:0002364"}


id: PBO:0082601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin heavy chain; subunit of the major coat protein involved in intracellular protein transport and endocytosis; the clathrin triskelion is a trimeric molecule composed of three heavy chains that radiate from a vertex and three light chains which bind noncovalently near the vertex of the triskelion; the light chain (CLC1) is thought to regulate function","termid":"PBO:0082601"}


id: FYPO:0004700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is bent along the long axis. In a bent cell, the long axis has one or more angles, rather than following a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"bent cell","termid":"FYPO:0005793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"bent vegetative cell","synonyms":[{"name":"bent cell during vegetative growth","type":"exact"},{"name":"bent vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, bent during vegetative growth","type":"exact"}],"termid":"FYPO:0004700"}


id: GO:2000477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric glomerular visceral epithelial cell development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"metanephric podocyte development","termid":"GO:0072249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric podocyte development","synonyms":[{"name":"regulation of metanephric glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:2000477"}


id: GO:0052923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7 isopentenyl diphosphate + (2E)-geranyl diphosphate = all-trans-nonaprenyl diphosphate + 7 diphosphate.","definition_xrefs":["RHEA:27563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity","secondary_identifiers":["MetaCyc:TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN","KEGG_REACTION:R07267","GO:0050347","EC:2.5.1.84","KEGG_REACTION:R09250"],"synonyms":[{"name":"(E)-octaprenyl-diphosphate:isopentenyl-diphosphate octaprenyltranstransferase activity","type":"related"},{"name":"SPP synthase activity","type":"broad"},{"name":"SPP-synthase activity","type":"broad"},{"name":"all-trans-nonaprenyl-diphosphate synthase activity","type":"related"},{"name":"nonaprenyl diphosphate synthase activity","type":"broad"},{"name":"nonaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"polyprenylpyrophosphate synthetase activity","type":"related"},{"name":"solPP synthase activity","type":"broad"},{"name":"solanesyl diphosphate synthetase activity","type":"broad"},{"name":"solanesyl pyrophosphate synthetase activity","type":"related"},{"name":"solanesyl-diphosphate synthase activity","type":"related"},{"name":"terpenoidallyltransferase activity","type":"related"},{"name":"terpenyl pyrophosphate synthetase activity","type":"related"},{"name":"trans-octaprenyltranstransferase activity","type":"related"},{"name":"trans-prenyltransferase activity","type":"related"}],"termid":"GO:0052923"}


id: PBO:0057774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2277","termid":"PBO:0057774"}


id: PBO:0042213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L1","termid":"PBO:0042213"}


id: PBO:0082842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constitutively expressed DL-glycerol-3-phosphate phosphatase; also known as glycerol-1-phosphatase; involved in glycerol biosynthesis, induced in response to both anaerobic and osmotic stress; GPP1 has a paralog, GPP2, that arose from the whole genome duplication","termid":"PBO:0082842"}


id: PBO:0028773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_nitric_oxide_level","termid":"PBO:0028773"}


id: PBO:0089230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria ortholog Clu1","termid":"PBO:0089230"}


id: GO:0071481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to X-ray","termid":"GO:0010165"},{"relation_name":"is_a","term_name":"cellular response to ionizing radiation","termid":"GO:0071479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to X-ray","synonyms":[{"name":"cellular response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:0071481"}


id: PBO:0069668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 945, pseudogene","termid":"PBO:0069668"}


id: PBO:0063061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PANK1 antisense RNA 1","termid":"PBO:0063061"}


id: GO:0007636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sudden, usually upward, movement off the ground or other surface through sudden muscular effort in the legs, following exposure to a chemical substance.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jump response","termid":"GO:0007630"},{"relation_name":"is_a","term_name":"chemosensory behavior","termid":"GO:0007635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemosensory jump behavior","synonyms":[{"name":"chemosensory jump behaviour","type":"exact"},{"name":"jump response to chemical stimulus","type":"exact"}],"termid":"GO:0007636"}


id: MONDO:0017491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tibial hemimelia","termid":"MONDO:0010144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibial hemimelia, bilateral","secondary_identifiers":["Orphanet:295079","icd11.foundation:1562926182","MEDGEN:1776601","UMLS:C5438440"],"synonyms":[{"name":"tibial longitudinal meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017491","xrefs":{"Monarch":{"xref_id":"0017491"}}}


id: PBO:0003731
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of ERAD pathway","termid":"PBO:0003731"}


id: GO:0062181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catatlysis of the reaction: calcitriol + 2 H+ + O2 + 2 reduced [adrenodoxin] = 1alpha,23S,25-trihydroxycholecalciferol + H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:22100522","PMID:30205156","RHEA:49192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-alpha,25-dihydroxyvitamin D3 23-hydroxylase activity","termid":"GO:0062181"}


id: GO:0102001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-isoleucine + 2 O2 + 2 NADPH(4-) + 2 H+ = (E)-2-methylbutanal oxime + 2 NADP(3-) + carbon dioxide + 3 H2O.","definition_xrefs":["EC:1.14.14.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isoleucine N-monooxygenase (oxime forming) activity","secondary_identifiers":["RHEA:28602","MetaCyc:1.14.13.117-RXN"],"termid":"GO:0102001"}


id: GO:0061760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An defense response against a fungus mediated through an innate immune response. An innate immune response is mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:dph","PMID:22470487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antifungal innate immune response","termid":"GO:0061760"}


id: PATO:0001748
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in which a portion of the outermost boundary of an entity folds in space such that a portion that was originally convex is now concave.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave","termid":"PATO:0001857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invaginated","termid":"PATO:0001748"}


id: GO:0071197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv alpha subunits 4.2 and 4.3.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"Kv4.2-Kv4.3 channel complex","secondary_identifiers":["CORUM:609"],"termid":"GO:0071197"}


id: PBO:0028752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_agglutination","termid":"PBO:0028752"}


id: GO:1901353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:12869188","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"regulation of phosphatidylglycerol biosynthetic process","termid":"GO:1901351"},{"relation_name":"positively_regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"activation of phosphatidylglycerol anabolism","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthesis","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthetic process","type":"narrow"},{"name":"activation of phosphatidylglycerol formation","type":"narrow"},{"name":"activation of phosphatidylglycerol synthesis","type":"narrow"},{"name":"positive regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"positive regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylglycerol formation","type":"exact"},{"name":"positive regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up-regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidylglycerol formation","type":"exact"},{"name":"upregulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901353"}


id: GO:0004613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2.","definition_xrefs":["EC:4.1.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate carboxykinase activity","termid":"GO:0004611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase (GTP) activity","secondary_identifiers":["Reactome:R-HSA-70241","Reactome:R-HSA-372819","MetaCyc:4.1.1.32-RXN","RHEA:10388"],"synonyms":[{"name":"GTP:oxaloacetate carboxy-lyase (adding GTP; phosphoenolpyruvate-forming)","type":"related"},{"name":"GTP:oxaloacetate carboxy-lyase (transphosphorylating)","type":"related"},{"name":"phosphoenolpyruvate carboxylase (GTP)","type":"exact"},{"name":"phosphoenolpyruvic carboxykinase","type":"broad"},{"name":"phosphoenolpyruvic carboxykinase (GTP)","type":"related"},{"name":"phosphoenolpyruvic carboxylase (GTP)","type":"related"},{"name":"phosphopyruvate (guanosine triphosphate) carboxykinase activity","type":"related"},{"name":"phosphopyruvate carboxylase (GTP)","type":"related"}],"termid":"GO:0004613"}


id: PR:Q9P7P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ker1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.03","synonyms":[{"name":"DNA-directed RNA polymerase I 17 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ker1","type":"exact"},{"name":"nucleolar protein ker1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P1"}


id: GO:1902434
data:
  {"annotated_genes":["SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110447],"is_not":false,"summary":null,"term":"GO:1902434"}]},"cv_name":"biological_process","definition":"The directed movement of sulfate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:14723223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion import across plasma membrane","termid":"GO:0098658"},{"relation_name":"is_a","term_name":"sulfate transmembrane transport","termid":"GO:1902358"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sulfate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sulfate import into cell","type":"exact"},{"name":"sulphate import into cell","type":"exact"}],"termid":"GO:1902434","terms_by_termid":{"GO:1902434":null}}


id: MONDO:0004577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Area of epithelial tissue loss from corneal surface; associated with inflammatory cells in the cornea and anterior chamber.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"},{"relation_name":"is_a","term_name":"ulcer disease","termid":"MONDO:0043839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal ulcer","secondary_identifiers":["HP:0200020","icd11.foundation:2089700977","NCIT:C50515","MESH:D003320","MEDGEN:40486","DOID:8463","ICD9:370.0","SCTID:91514001","UMLS:C0010043","ICD9:370.00","ICD10CM:H16.0"],"synonyms":[{"name":"Ulcer, corneal","type":"exact"},{"name":"cornea ulcer disease","type":"exact"},{"name":"ulcer disease of cornea","type":"exact"}],"termid":"MONDO:0004577","xrefs":{"Monarch":{"xref_id":"0004577"}}}


id: GO:0160148
data:
  {"annotated_genes":["SJAG_04065"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102814],"is_not":false,"summary":null,"term":"GO:0160148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(55) in tRNA = pseudouridine(55) in tRNA.","definition_xrefs":["EC:5.4.99.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140101","GO:0003674","GO:0016853","GO:0140098"],"is_obsolete":false,"name":"tRNA pseudouridine(55) synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:42532"],"termid":"GO:0160148","terms_by_termid":{"GO:0160148":null}}


id: PBO:0069808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1094, pseudogene","termid":"PBO:0069808"}


id: PBO:0028865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mRNA_level_during_vegetative_growth","termid":"PBO:0028865"}


id: PBO:0051858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 4","termid":"PBO:0051858"}


id: FYPO:0007144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of deoxyribonuclease (pyrimidine dimer) activity is increased during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"},{"relation_name":"is_a","term_name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000654","FYPO:0000002","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased deoxyribonuclease (pyrimidine dimer) activity during cellular response to UV","synonyms":[{"name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity during cellular response to UV","type":"narrow"},{"name":"increased deoxyribonuclease (pyrimidine dimer) activity during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0007144"}


id: PBO:0038943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide","termid":"PBO:0038943"}


id: PBO:0056901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIER family member 3","termid":"PBO:0056901"}


id: PBO:0073191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein T pseudogene 2","termid":"PBO:0073191"}


id: MONDO:0100068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SLC10A7 deficiency is characterized by compound heterozygous mutations in the SLC10A7 gene, a gene of unknown function in humans. It combines overlapping clinical phenotypes characterized by short stature, defective enamel formation (amelogenesis imperfecta), skeletal dysplasia, facial dysmorphism, moderate hearing impairment and mildly impaired intellectual developmen.","definition_xrefs":["PMID:29878199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"SLC10A7-congenital disorder of glycosylation","synonyms":[{"name":"SLC10A7 deficiency","type":"exact"},{"name":"SLC10A7-CDG","type":"exact"},{"name":"SLC10A7-congenital disorder of glycosylation","type":"exact"}],"termid":"MONDO:0100068","xrefs":{"Monarch":{"xref_id":"0100068"}}}


id: MONDO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hypertension","termid":"MONDO:0001200"},{"relation_name":"is_a","term_name":"malignant hypertension","termid":"MONDO:0006846"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant secondary hypertension","secondary_identifiers":["MEDGEN:510039","SCTID:89242004","UMLS:C0155617","DOID:13731","ICD9:405.0","ICD9:405.09"],"termid":"MONDO:0001785","xrefs":{"Monarch":{"xref_id":"0001785"}}}


id: PBO:0041109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 2","termid":"PBO:0041109"}


id: PBO:0081484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 366","termid":"PBO:0081484"}


id: PBO:0110302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1.2","termid":"PBO:0110302"}


id: PBO:0051159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-38-3 (non-functional)","termid":"PBO:0051159"}


id: PBO:0058000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3924","termid":"PBO:0058000"}


id: FYPO:0004352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to methylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to methylglyoxal","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to methylglyoxal","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to methylglyoxal during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to methylglyoxal","type":"exact"}],"termid":"FYPO:0004352"}


id: PBO:0057083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181b-2","termid":"PBO:0057083"}


id: GO:0090554
data:
  {"annotated_genes":["SJAG_01731","SJAG_02897","SJAG_00669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94753,98256,100521],"is_not":false,"summary":null,"term":"GO:0090554"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylcholine from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["RHEA:38583","PMID:16452632","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphatidylcholine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent phosphatidylcholine transporter activity","type":"broad"},{"name":"ATPase-coupled phosphatidylcholine transporter activity","type":"broad"},{"name":"phosphatidylcholine floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"},{"name":"phosphatidylcholine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090554","terms_by_termid":{"GO:0090554":null}}


id: PBO:0063671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3","termid":"PBO:0063671"}


id: GO:0014713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle tissue development","termid":"GO:0048642"},{"relation_name":"negatively_regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branchiomeric skeletal muscle development","termid":"GO:0014713"}


id: GO:0072733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a staurosporine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to staurosporine","termid":"GO:0072733"}


id: MONDO:0017235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial omphalocele syndrome with facial dysmorphism is a rare genetic developmental defect during embryogenesis characterized by omphalocele associated with facial dysmorphism including flat face, short, upturned nose, long and wide philtrum and flattened maxillary arch and abnormalities of hands.","definition_xrefs":["Orphanet:280403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial omphalocele syndrome with facial dysmorphism","secondary_identifiers":["GARD:21086","MEDGEN:1655514","UMLS:C4749579"],"termid":"MONDO:0017235","xrefs":{"Monarch":{"xref_id":"0017235"}}}


id: PBO:0085872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; HVG1 has a paralog, VRG4, that arose from the whole genome duplication","termid":"PBO:0085872"}


id: GO:0047651
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bromochloromethane + H2O = bromide + chloride + formaldehyde + 2 H+.","definition_xrefs":["RHEA:13765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"alkylhalidase activity","secondary_identifiers":["KEGG_REACTION:R03523"],"synonyms":[{"name":"alkyl-halide halidohydrolase activity","type":"related"},{"name":"haloalkane halidohydrolase activity","type":"related"},{"name":"halogenase activity","type":"related"}],"termid":"GO:0047651"}


id: MOD:00803
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tyrosine residue by a thioether bond to form 3-(S-L-cysteinyl)-L-tyrosine.","definition_xrefs":["PubMed:15342250","RESID:AA0396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"3-(S-L-cysteinyl)-L-tyrosine","synonyms":[{"name":"(2S,3R)-2-amino-3-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxyethylthio)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"3-(L-cystein-S-yl)-L-tyrosine","type":"exact"},{"name":"CROSSLNK 3-(S-cysteinyl)-tyrosine (Cys-Tyr)","type":"exact"},{"name":"S-(tyros-3'-yl)cysteine","type":"exact"},{"name":"XLNKSCys3Tyr","type":"exact"}],"termid":"MOD:00803"}


id: PBO:0086460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metalloprotease; overproduction suppresses lethality due to expression of the dominant PET9 allele AAC2-A128P","termid":"PBO:0086460"}


id: PBO:0050355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 58","termid":"PBO:0050355"}


id: PBO:0066856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 156","termid":"PBO:0066856"}


id: PR:P36587
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH--cytochrome P450 reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19384:SF17","PRO:DNx","OMA:SCHPO03316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH--cytochrome P450 reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.01","secondary_identifiers":["UniProtKB:P36587"],"synonyms":[{"name":"CPR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"P450R (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POR","type":"exact"}],"termid":"PR:P36587"}


id: PBO:0072477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 6","termid":"PBO:0072477"}


id: PBO:0073127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC13 homolog, nuclear pore and COPII coat complex component pseudogene 1","termid":"PBO:0073127"}


id: GO:0090188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of pancreatic juice secretion","termid":"GO:0090186"},{"relation_name":"negatively_regulates","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of pancreatic juice secretion","termid":"GO:0090188"}


id: GO:0010997
data:
  {"annotated_genes":["SJAG_04699","SJAG_00666","SJAG_04853","SJAG_04671","SJAG_03858","SJAG_01330","SJAG_00071","SJAG_03809"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76882,79418,79438,80288,80660,99687,106648,115888],"is_not":false,"summary":null,"term":"GO:0010997"}]},"cv_name":"molecular_function","definition":"Binding to an anaphase-promoting complex. A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_01330":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04671":null,"SJAG_04699":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"anaphase-promoting complex binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"APC binding","type":"exact"}],"termid":"GO:0010997","terms_by_termid":{"GO:0010997":null}}


id: PBO:0080703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 7A","termid":"PBO:0080703"}


id: MONDO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal degeneration","secondary_identifiers":["ICD9:371.4","UMLS:C0155118","SCTID:111521006","MEDGEN:56352","ICD10CM:H18.4","DOID:1237","ICD9:371.49","icd11.foundation:699504167","ICD9:371.40"],"termid":"MONDO:0001515","xrefs":{"Monarch":{"xref_id":"0001515"}}}


id: PBO:0067146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 196, pseudogene","termid":"PBO:0067146"}


id: MOD:01538
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01538"}


id: PBO:0086084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; appears to form homodimers in vivo and does not complex with other Pmt proteins; target for new antifungals","termid":"PBO:0086084"}


id: FYPO:0000567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000032","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of septum assembly","synonyms":[{"name":"decreased division septum formation involved in mitotic cytokinesis","type":"related"},{"name":"decreased duration of division septum assembly","type":"exact"},{"name":"decreased duration of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"decreased duration of septation","type":"broad"},{"name":"decreased duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"decreased duration of septum assembly during vegetative growth","type":"exact"},{"name":"decreased septation","type":"related"},{"name":"decreased septum formation","type":"related"},{"name":"reduced duration of septum assembly","type":"exact"},{"name":"septum formation: decreased","type":"broad"}],"termid":"FYPO:0000567"}


id: MONDO:0800104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency disease which the cause of the disease is a mutation in the PTPRC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 105","secondary_identifiers":["UMLS:C5677005","OMIM:619924","MEDGEN:1809425"],"synonyms":[{"name":"IMD105","type":"exact"},{"name":"SCID, autosomal recessive, T cell-negative, B cell-positive, NK cell-positive","type":"related"},{"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-positive, NK cell-positive","type":"related"}],"termid":"MONDO:0800104","xrefs":{"Monarch":{"xref_id":"0800104"}}}


id: PBO:0049851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hdc homolog, cell cycle regulator","termid":"PBO:0049851"}


id: PBO:0039192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akirin 2","termid":"PBO:0039192"}


id: FYPO:0002910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to transcribed regions of chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at transcribed regions during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at transcribed regions during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at transcribed regions during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to transcribed chromatin regions during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at transcribed regions during vegetative growth","type":"exact"}],"termid":"FYPO:0002910"}


id: MONDO:0012110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Growth delay due to insulin-like growth factor I deficiency is characterized by the association of intrauterine and postnatal growth retardation with sensorineural deafness and intellectual deficit.","definition_xrefs":["Orphanet:73272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth delay due to insulin-like growth factor type 1 deficiency","secondary_identifiers":["OMIM:608747","GARD:10627","SCTID:724385009","UMLS:C1837475","MESH:C563867","MEDGEN:373337"],"synonyms":[{"name":"IGF-1 deficiency","type":"exact"},{"name":"IGF1 deficiency","type":"related"},{"name":"growth delay-deafness- intellectual disability syndrome","type":"exact"},{"name":"growth retardation with deafness and mental retardation due to IGF1 deficiency","type":"exact"},{"name":"growth retardation with sensorineural deafness and intellectual disability","type":"related"},{"name":"growth retardation with sensorineural deafness and mental retardation","type":"related"},{"name":"insulin-like growth Factor 1 deficiency","type":"related"},{"name":"insulin-like growth factor I deficiency","type":"related"},{"name":"primary insulin-like growth factor deficiency","type":"exact"}],"termid":"MONDO:0012110","xrefs":{"Monarch":{"xref_id":"0012110"}}}


id: MONDO:0009580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the PRSS12 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 1","secondary_identifiers":["GARD:22537","MESH:C565406","DOID:0081177","MEDGEN:344468","OMIM:249500","UMLS:C1855304"],"synonyms":[{"name":"MRT1","type":"related"},{"name":"PRSS12 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in PRSS12","type":"exact"},{"name":"intellectual disability, autosomal recessive 1","type":"exact"},{"name":"intellectual disability, autosomal recessive type 1","type":"exact"},{"name":"mental retardation, autosomal recessive 1","type":"related"},{"name":"mental retardation, autosomal recessive type 1","type":"exact"}],"termid":"MONDO:0009580","xrefs":{"Monarch":{"xref_id":"0009580"}}}


id: PBO:0040651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBSome interacting protein 1","termid":"PBO:0040651"}


id: GO:1902629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of mRNA stability that is involved in cellular response to UV.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:10954610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"part_of","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of mRNA stability involved in cellular response to UV","synonyms":[{"name":"regulation of mRNA stability involved in cellular response to UV light stimulus","type":"exact"},{"name":"regulation of mRNA stability involved in cellular response to UV radiation stimulus","type":"exact"},{"name":"regulation of mRNA stability involved in cellular response to ultraviolet light stimulus","type":"exact"},{"name":"regulation of mRNA stability involved in cellular response to ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:1902629"}


id: PBO:0061115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 6","termid":"PBO:0061115"}


id: PBO:0061566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase","termid":"PBO:0061566"}


id: FYECO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with ammonium as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, ammonium nitrogen source","termid":"FYECO:0000254"}


id: PBO:0074783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 4B","termid":"PBO:0074783"}


id: PBO:0081674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 595","termid":"PBO:0081674"}


id: PR:P10506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- byr1 gene.","definition_xrefs":["UniProtKB:P10506","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase byr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.13","synonyms":[{"name":"MAPK kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAPKK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-byr1","type":"exact"}],"termid":"PR:P10506"}


id: MONDO:0007819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary autosomal dominant condition characterized primarily by single (unpaired) deciduous and permanent maxillary central incisors and short stature. Growth hormone deficiencies may also be present. Mutations in the SHH gene have been identified.","definition_xrefs":["OMIM:147250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly 3","termid":"MONDO:0007733"},{"relation_name":"is_a","term_name":"microform holoprosencephaly","termid":"MONDO:0017219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"solitary median maxillary central incisor syndrome","secondary_identifiers":["MESH:C537342","SCTID:707609006","UMLS:C1840235","icd11.foundation:1834868112","MEDGEN:326686","Orphanet:2286","GARD:4877"],"synonyms":[{"name":"Fused incisors","type":"related"},{"name":"SMMCI","type":"exact"},{"name":"SMMCI syndrome","type":"related"},{"name":"incisors fused","type":"related"},{"name":"incisors, Fused","type":"related"},{"name":"single central maxillary incisor","type":"related"},{"name":"single median maxillary central incisor","type":"exact"},{"name":"single upper central incisor","type":"exact"},{"name":"solitary MEDIAN maxillary central incisor","type":"related"},{"name":"solitary median maxillary central incisor syndrome","type":"exact"}],"termid":"MONDO:0007819","xrefs":{"Monarch":{"xref_id":"0007819"}}}


id: GO:0008714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + H2O = D-ribose 5-phosphate + adenine.","definition_xrefs":["EC:3.2.2.4","RHEA:20129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"AMP nucleosidase activity","secondary_identifiers":["KEGG_REACTION:R00182","MetaCyc:AMP-NUCLEOSID-RXN"],"synonyms":[{"name":"AMP phosphoribohydrolase activity","type":"related"},{"name":"adenosine monophosphate nucleosidase activity","type":"related"},{"name":"adenylate nucleosidase activity","type":"related"}],"termid":"GO:0008714"}


id: GO:1904941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:23575307","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904941)","synonyms":[{"name":"activation of DNA nucleotidylexotransferase activity","type":"narrow"},{"name":"activation of TdT","type":"related"},{"name":"activation of addase activity","type":"narrow"},{"name":"activation of deoxynucleotidyl terminal transferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic acid nucleotidyltransferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic nucleotidyltransferase activity","type":"narrow"},{"name":"activation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"narrow"},{"name":"activation of terminal addition enzyme activity","type":"related"},{"name":"activation of terminal deoxynucleotide transferase activity","type":"narrow"},{"name":"activation of terminal deoxynucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal deoxyribonucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal transferase activity","type":"narrow"},{"name":"positive regulation of TdT","type":"related"},{"name":"positive regulation of addase activity","type":"exact"},{"name":"positive regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"positive regulation of terminal addition enzyme activity","type":"related"},{"name":"positive regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"positive regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal transferase activity","type":"exact"},{"name":"up regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of TdT","type":"related"},{"name":"up regulation of addase activity","type":"exact"},{"name":"up regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of terminal addition enzyme activity","type":"related"},{"name":"up regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal transferase activity","type":"exact"},{"name":"up-regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of TdT","type":"related"},{"name":"up-regulation of addase activity","type":"exact"},{"name":"up-regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of terminal addition enzyme activity","type":"related"},{"name":"up-regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up-regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal transferase activity","type":"exact"},{"name":"upregulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of TdT","type":"related"},{"name":"upregulation of addase activity","type":"exact"},{"name":"upregulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of terminal addition enzyme activity","type":"related"},{"name":"upregulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"upregulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904941"}


id: FYPO:0007757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the new mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to new mitotic spindle pole body","termid":"FYPO:0003330"},{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body during anaphase","termid":"FYPO:0007568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to new mitotic spindle pole body during anaphase","synonyms":[{"name":"normal asymmetric protein localization to new mitotic spindle pole body during anaphase","type":"exact"},{"name":"normal protein localisation to new mitotic spindle pole body during anaphase","type":"exact"},{"name":"normal protein localization to new mitotic SPB during anaphase","type":"exact"},{"name":"normal protein localization to new mitotic spindle pole body during anaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to new spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to new spindle pole body during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007757"}


id: PBO:0028028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiotic_anaphase_I","termid":"PBO:0028028"}


id: GO:0008923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + H+ = cadaverine + CO2.","definition_xrefs":["RHEA:22352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"lysine decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R00462","MetaCyc:LYSDECARBOX-RXN","EC:4.1.1.18"],"synonyms":[{"name":"L-lysine carboxy-lyase activity","type":"related"}],"termid":"GO:0008923"}


id: MONDO:0012523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PRCD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 36","secondary_identifiers":["MEDGEN:351175","UMLS:C1864621","GARD:10403","MESH:C566431","DOID:0110405","ICD10CM:H35.5","OMIM:610599"],"synonyms":[{"name":"PRCD retinitis pigmentosa","type":"exact"},{"name":"RP 36","type":"related"},{"name":"RP36","type":"exact"},{"name":"retinitis pigmentosa 36","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PRCD","type":"exact"},{"name":"retinitis pigmentosa type 36","type":"exact"}],"termid":"MONDO:0012523","xrefs":{"Monarch":{"xref_id":"0012523"}}}


id: PBO:0087293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Similar to 6-phosphofructo-2-kinase enzymes; mRNA expression is repressed by the Rfx1p-Tup1p-Ssn6p repressor complex; YLR345W is not an essential gene","termid":"PBO:0087293"}


id: MONDO:0018814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-SCID combined immunodeficiency","secondary_identifiers":["GARD:21981","MEDGEN:1842865","Orphanet:480549","UMLS:C5680098"],"synonyms":[{"name":"non-SCID","type":"exact"},{"name":"non-severe combined immunodeficiency","type":"exact"}],"termid":"MONDO:0018814","xrefs":{"Monarch":{"xref_id":"0018814"}}}


id: GO:0034777
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a recycling endosome.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome lumen","termid":"GO:0031904"},{"relation_name":"part_of","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"recycling endosome lumen","termid":"GO:0034777"}


id: FYPO:0005802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane of the cell tip occurs more quickly than normal.","definition_xrefs":["PomBase:mah","PMID:25837586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of protein movement within plasma membrane at cell tip","synonyms":[{"name":"fast protein movement within plasma membrane at cell tip","type":"exact"},{"name":"increased rate of protein movement within plasma membrane at cell tip during mitotic cell cycle","type":"related"},{"name":"increased rate of protein movement within plasma membrane at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005802"}


id: PBO:0005639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Cox18","termid":"PBO:0005639"}


id: PBO:0083085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA 5' AMP hydrolase involved in DNA repair; member of the histidine triad (HIT) superfamily of nucleotide-binding proteins; homolog of Aprataxin, a Hint related protein that is mutated in individuals with ataxia with oculomotor apraxia; relative distribution to nuclear foci decreases upon DNA replication stress","termid":"PBO:0083085"}


id: PBO:0052757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 49","termid":"PBO:0052757"}


id: GO:2000306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of photomorphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photomorphogenesis","termid":"GO:0010099"},{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"photomorphogenesis","termid":"GO:0009640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of photomorphogenesis","synonyms":[{"name":"positive regulation of plant development in response to light","type":"exact"}],"termid":"GO:2000306"}


id: GO:1990234
data:
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id: GO:0043041
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id: MONDO:0006625
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id: GO:0090547
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id: GO:1990797
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id: PBO:0016518
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id: PBO:0034297
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id: FYPO:0006460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing protein-coding genes during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:19965387","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at protein coding gene during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at protein coding gene during first meiotic nuclear division","type":"exact"},{"name":"increased histone H2A phosphorylation at protein-coding gene during meiosis I","type":"exact"}],"termid":"FYPO:0006460"}


id: PBO:0065179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl-tRNA synthetase associated domain containing 1, pseudogene","termid":"PBO:0065179"}


id: PBO:0048098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 19","termid":"PBO:0048098"}


id: PR:P0CS85
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBCPT2R1.03 gene.","definition_xrefs":["UniProtKB:P0CS85","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein CPT2R1.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.03","synonyms":[{"name":"Spom972h-SPBCPT2R1.03","type":"exact"}],"termid":"PR:P0CS85"}


id: PBO:0070302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 8","termid":"PBO:0070302"}


id: GO:0033865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside bisphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleoside bisphosphate metabolic process","synonyms":[{"name":"nucleoside bisphosphate metabolism","type":"exact"}],"termid":"GO:0033865"}


id: GO:0048259
data:
  {"annotated_genes":["SJAG_04052","SJAG_00649","SJAG_04465"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119189,111351,111998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000369"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00649":null,"SJAG_04052":null,"SJAG_04465":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of receptor-mediated endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of receptor mediated endocytosis","type":"exact"}],"termid":"GO:0048259","terms_by_termid":{"GO:2000369":null}}


id: PBO:0001948
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.106","termid":"PBO:0001948"}


id: MONDO:0014276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Combined immunodeficiency due to CD3gamma deficiency is an extremely rare genetic combined primary immunodeficiency characterized by a selective partial lymphopenia (T+/-B+NK+) phenotype and decreased CD3 complex resulting in a variable but usually mild clinical presentation ranging from asymptomatic until adulthood to high susceptibility to infections from early infancy with predominant automimmune manifestations.","definition_xrefs":["Orphanet:169082"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"},{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to CD3gamma deficiency","secondary_identifiers":["GARD:17046","OMIM:615607","SCTID:725135004","UMLS:C3810107","MEDGEN:816437","DOID:0111973","DOID:0060018"],"synonyms":[{"name":"CD3 deficiency","type":"exact"},{"name":"CD3-gamma deficiency","type":"exact"},{"name":"CD3gamma deficiency","type":"exact"},{"name":"IMD17","type":"exact"},{"name":"SCID-like immunodeficiency, T cell-partial, B cell-positive, NK cell-positive","type":"exact"},{"name":"combined immunodeficiency due to CD3gamma deficiency","type":"exact"},{"name":"immunodeficiency 17","type":"exact"},{"name":"immunodeficiency 17, CD3 gamma deficient","type":"exact"},{"name":"immunodeficiency type 17","type":"exact"}],"termid":"MONDO:0014276","xrefs":{"Monarch":{"xref_id":"0014276"}}}


id: PBO:0060261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloma overexpressed","termid":"PBO:0060261"}


id: MONDO:0007278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in mutation in the region 14q22-q23.","definition_xrefs":["DOID:0110227","PMID:6694185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 32 multiple types","secondary_identifiers":["MEDGEN:854634","OMIM:115650","UMLS:C3887926"],"synonyms":[{"name":"CTAA1","type":"narrow"},{"name":"CTPP5","type":"narrow"},{"name":"CTRCT32","type":"exact"},{"name":"anterior polar cataract 1","type":"narrow"},{"name":"cataract 32, multiple types","type":"related"},{"name":"cataract, anterior polar","type":"related"},{"name":"cataract, anterior polar, 1","type":"related"},{"name":"cataract, posterior polar, 5","type":"related"},{"name":"posterior polar cataract 5","type":"narrow"}],"termid":"MONDO:0007278","xrefs":{"Monarch":{"xref_id":"0007278"}}}


id: FYPO:0000950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell does not contain a septum and is elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000005","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"elongated aseptate vegetative cell","synonyms":[{"name":"elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"elongated aseptate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0000950"}


id: GO:0140587
data:
  {"annotated_genes":["SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140585"}]},"cv_name":"molecular_function","definition":"Bridging together two DNA loop anchors together, maintaining a chromatin loop.","definition_xrefs":["PMID:32213323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin DNA binding","termid":"GO:0031490"},{"relation_name":"is_a","term_name":"DNA-DNA tethering activity","termid":"GO:0106260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"chromatin loop anchoring activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA loop binding","type":"exact"},{"name":"chromosomal loop binding","type":"exact"}],"termid":"GO:0140587","terms_by_termid":{"GO:0140585":null}}


id: PBO:0045890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 2","termid":"PBO:0045890"}


id: GO:0034505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts are deposited into calcareous tooth structures such as dental enamel, dentin and cementum.","definition_xrefs":["MSH:D014074","GOC:mah","MP:0002817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"},{"relation_name":"part_of","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth mineralization","synonyms":[{"name":"tooth calcification","type":"exact"}],"termid":"GO:0034505"}


id: FYPO:0004793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is smaller than normal during mitosis.","definition_xrefs":["PomBase:mah","PMID:22959349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased telomere-nuclear envelope distance during mitotic M phase","synonyms":[{"name":"decreased distance between telomeres and nuclear envelope during mitosis","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during M phase during mitotic cell cycle","type":"related"},{"name":"decreased telomere-nuclear envelope distance during mitosis during vegetative growth","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during mitotic M phase","type":"related"},{"name":"reduced telomere-nuclear envelope distance during mitosis","type":"exact"}],"termid":"FYPO:0004793"}


id: PBO:0005420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex subunit Rec11","termid":"PBO:0005420"}


id: PBO:0108556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) H3-K9 specific complex subunit Clr6","termid":"PBO:0108556"}


id: FYPO:0004045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which vegetative a cell is elongated, and contains four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated tetranucleate vegetative cell","termid":"FYPO:0004044"},{"relation_name":"is_a","term_name":"tetranucleate vegetative cell with fragmented septum","termid":"FYPO:0004046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"elongated tetranucleate vegetative cell with fragmented septum","synonyms":[{"name":"elongated tetranucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"elongated tetranucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"},{"name":"long tetranucleate vegetative cell with fragmented septum","type":"exact"}],"termid":"FYPO:0004045"}


id: PBO:0003417
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mi2-like protein Interacting with clr Three","termid":"PBO:0003417"}


id: SO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that has been found to be associated with disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_phenotype","termid":"SO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease_associated_variant","synonyms":[{"name":"disease associated variant","type":"exact"}],"termid":"SO:0001771"}


id: PBO:0056396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE1 pseudogene 3","termid":"PBO:0056396"}


id: GO:0098828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inhibitory postsynaptic potential (IPSP). IPSP is a temporary decrease in postsynaptic membrane potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"regulates","term_name":"inhibitory postsynaptic potential","termid":"GO:0060080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modulation of inhibitory postsynaptic potential","synonyms":[{"name":"regulation of inhibitory postsynaptic potential","type":"exact"}],"termid":"GO:0098828"}


id: FYPO:0004330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type) at telomeres. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PomBase:mah","PMID:17032733","GO:0051306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic sister chromatid separation","termid":"FYPO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic telomeric DNA separation","synonyms":[{"name":"normal mitotic chromosome separation at telomere","type":"exact"},{"name":"normal mitotic sister chromatid separation at telomere","type":"exact"},{"name":"normal mitotic telomere disjunction","type":"exact"},{"name":"normal mitotic telomeric DNA separation during vegetative growth","type":"exact"},{"name":"normal telomere separation","type":"exact"},{"name":"normal telomeric DNA separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004330"}


id: PBO:0043694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B","termid":"PBO:0043694"}


id: GO:0007163
data:
  {"annotated_genes":["SJAG_01376","SJAG_04724","SJAG_00185","SJAG_02838","SJAG_03625","SJAG_02737","SJAG_01722","SJAG_00424","SJAG_03596","SJAG_04703","SJAG_03581","SJAG_02624","SJAG_02222","SJAG_03170","SJAG_01613","SJAG_01799","SJAG_02819","SJAG_03486","SJAG_00268","SJAG_03705","SJAG_00030","SJAG_03048","SJAG_01901","SJAG_01388","SJAG_03637","SJAG_02392","SJAG_00332","SJAG_03748","SJAG_04624","SJAG_02022","SJAG_00851","SJAG_00216","SJAG_04461","SJAG_04509","SJAG_01373","SJAG_04980","SJAG_00028","SJAG_00845","SJAG_03754","SJAG_01456","SJAG_01196","SJAG_00596","SJAG_00333","SJAG_00910","SJAG_00355","SJAG_02366","SJAG_00236","SJAG_04522","SJAG_04322","SJAG_01794","SJAG_03453","SJAG_00317","SJAG_03540","SJAG_00610","SJAG_00594","SJAG_01732","SJAG_00152","SJAG_02760","SJAG_02695","SJAG_02651","SJAG_02536","SJAG_03126","SJAG_00140","SJAG_03718","SJAG_00229","SJAG_03086","SJAG_00661","SJAG_00514","SJAG_04666","SJAG_04653"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76865,91470,94168,98243,104065,104692,105492,107218,109422],"is_not":false,"summary":null,"term":"GO:0007163"},{"annotations":[118232,100063,88375,103808,107179,111089,116809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[119528,104971,92915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061171"},{"annotations":[80520,92593,71130,78745,91169,97521,115133,93803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030010"},{"annotations":[76675,105192,97299,117273,104863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000132"},{"annotations":[89757,111090,73589,88788,96170,99646,100499,105680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030950"},{"annotations":[118234,104974,112635,118971,96171,90189,99972,100064,107928,114375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061245"},{"annotations":[101594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030952"},{"annotations":[99541,77347,79795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030951"},{"annotations":[70632,73679,71844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030011"},{"annotations":[91286],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904846"},{"annotations":[104017,107930,112804],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061173"},{"annotations":[116914,107931],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[94066,100501,105682],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[104019],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[112297,94906],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000114"},{"annotations":[102708],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000099"},{"annotations":[91464,94907,95983,104854,113378,119119],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[93806,100526,100715,91258,96179,109744],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032878"},{"annotations":[106437,88218,92749,103166],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular 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id: GO:0007304
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The construction of a chorion-containing eggshell. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eggshell formation","termid":"GO:0030703"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorion-containing eggshell formation","synonyms":[{"name":"eggshell formation","type":"broad"}],"termid":"GO:0007304"}


id: PBO:0057934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3660","termid":"PBO:0057934"}


id: PBO:0040166
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylserotonin O-methyltransferase like","termid":"PBO:0040166"}


id: PBO:0028980
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_glutathione","termid":"PBO:0028980"}


id: PBO:0026635
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K8_acetylation","termid":"PBO:0026635"}


id: PR:Q09869
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12075:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.05c","secondary_identifiers":["UniProtKB:Q09869"],"synonyms":[{"name":"SPAC12G12.05c","type":"related"},{"name":"Spom972h-TAF9","type":"exact"},{"name":"TBP-associated factor 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09869"}


id: PBO:0080716
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WRN helicase interacting protein 1","termid":"PBO:0080716"}


id: MONDO:0017924
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by progressive calcification of the brain and spinal cord, growth retardation, psychomotor anomalies, deafness and anemia. Renal tubular acidosis was found in one patient. To date, this syndrome has been described in only two patients from one family.","definition_xrefs":["Orphanet:3240"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system calcification-deafness-tubular acidosis-anemia syndrome","secondary_identifiers":["GARD:18789","MEDGEN:1384620","UMLS:C4512024"],"synonyms":[{"name":"Yoshimura-Takeshita syndrome","type":"exact"}],"termid":"MONDO:0017924","xrefs":{"Monarch":{"xref_id":"0017924"}}}


id: PBO:0050667
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 4 like","termid":"PBO:0050667"}


id: FYPO:0002196
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id: PBO:0066141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB associated KRAB zinc finger","termid":"PBO:0066141"}


id: GO:0150036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission.","definition_xrefs":["PMID:27296803","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"trans-synaptic signaling by endocannabinoid, modulating synaptic transmission","termid":"GO:0099553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission","termid":"GO:0150036"}


id: PATO:0001814
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's impaired elastic tension that facilitate response to stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonicity","termid":"PATO:0001439"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonicity","termid":"PATO:0001814"}


id: PBO:0031367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_recombination","termid":"PBO:0031367"}


id: MOD:01838
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysinoalanine.","definition_xrefs":["RESID:AA0123#LYS","PubMed:2544544","PubMed:19155267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysinoalanine","termid":"MOD:01853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine (Lys)","synonyms":[{"name":"(2R,9S)-lysinoalanine","type":"exact"},{"name":"(2S)-2-amino-6-([(2R)-2-amino-2-carboxyethyl]amino)hexanoic acid","type":"exact"},{"name":"L-lysinoalanine","type":"exact"},{"name":"LAL","type":"exact"},{"name":"MOD_RES Lysino-D-alanine (Lys)","type":"exact"},{"name":"N-epsilon-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"N6-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"alaninolysine","type":"exact"},{"name":"lysino-D-alanine","type":"exact"}],"termid":"MOD:01838"}


id: PBO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen54 (predicted)","termid":"PBO:0005000"}


id: PR:Q10336
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.06c","synonyms":[{"name":"Spom972h-mcp6","type":"exact"},{"name":"horsetail movement protein hrs1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 3 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10336"}


id: MONDO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes involving the chondral tissue (cartilage).","definition_xrefs":["MESH:D002357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"articular cartilage disorder","termid":"MONDO:0003816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondromalacia","secondary_identifiers":["icd11.foundation:547071520","SCTID:63198006","MEDGEN:39328","ICD10CM:M94.2","ICD9:733.92","DOID:2557","UMLS:C0085700"],"termid":"MONDO:0002342","xrefs":{"Monarch":{"xref_id":"0002342"}}}


id: GO:1900581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (17Z)-protosta-17(20),24-dien-3beta-ol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"tetracyclic triterpenoid biosynthetic process","termid":"GO:0010686"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolic process","termid":"GO:1900579"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(17Z)-protosta-17(20),24-dien-3beta-ol biosynthetic process","synonyms":[{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol anabolism","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol biosynthesis","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol formation","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol synthesis","type":"exact"}],"termid":"GO:1900581"}


id: GO:0043450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["GOC:jl","Wikipedia:Alkene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"},{"relation_name":"is_a","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkene biosynthetic process","synonyms":[{"name":"alkene anabolism","type":"exact"},{"name":"alkene biosynthesis","type":"exact"},{"name":"alkene formation","type":"exact"},{"name":"alkene synthesis","type":"exact"}],"termid":"GO:0043450"}


id: GO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of antral follicles due to cell proliferation and/or growth of the antral cavity.","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antral ovarian follicle growth","termid":"GO:0001547"}


id: MONDO:0003663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare endometrioid adenocarcinoma that arises from the uterine ligament. Some of the reported cases were associated with endometriosis.","definition_xrefs":["NCIT:C40138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine ligament adenocarcinoma","termid":"MONDO:0002741"},{"relation_name":"is_a","term_name":"cervical endometrioid adenocarcinoma","termid":"MONDO:0003665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament endometrioid adenocarcinoma","secondary_identifiers":["DOID:5829"],"synonyms":[{"name":"endometrioid adenocarcinoma of uterine ligament","type":"exact"},{"name":"uterine ligament endometrioid adenocarcinoma","type":"exact"}],"termid":"MONDO:0003663","xrefs":{"Monarch":{"xref_id":"0003663"}}}


id: MONDO:0020095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of disease with focal palmoplantar keratoderma as a major feature.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant disease associated with focal palmoplantar keratoderma as a major feature (obsolete MONDO:0020095)","secondary_identifiers":["Orphanet:98353"],"synonyms":[{"name":"autosomal dominant disease associated with focal palmoplantar hyperkeratosis as a major feature","type":"exact"},{"name":"autosomal dominant disease with focal palmoplantar keratoderma as a major feature","type":"exact"},{"name":"disease with focal palmoplantar keratoderma as a major feature, autosomal dominant","type":"exact"}],"termid":"MONDO:0020095","xrefs":{"Monarch":{"xref_id":"0020095"}}}


id: PBO:0041810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium regulated heat stable protein 1","termid":"PBO:0041810"}


id: PBO:0075828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 3","termid":"PBO:0075828"}


id: PBO:0082275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anillin-like protein involved in bud-site selection; required for the axial budding pattern; required for the formation and disassembly of the double septin ring structure, and generally for septin organization; functions as a platform linking the cytokinesis tag septins to the axial landmark through its multiple domains; in vivo substrate of Cdc28p/Clb2p","termid":"PBO:0082275"}


id: GO:0032538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any behavior associated with finding a host organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"host-seeking behavior","termid":"GO:0032537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of host-seeking behavior","synonyms":[{"name":"regulation of host-seeking behaviour","type":"exact"}],"termid":"GO:0032538"}


id: PBO:0070318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 7","termid":"PBO:0070318"}


id: PR:Q9Y7S6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kynurenine/alpha-aminoadipate aminotransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05066","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic amino acid aminotransferase C569.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.07","secondary_identifiers":["UniProtKB:Q9Y7S6"],"synonyms":[{"name":"Spom972h-AADAT","type":"exact"}],"termid":"PR:Q9Y7S6"}


id: PBO:0085304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho85p cyclin of the Pho80p subfamily; forms the major Glc8p kinase together with Pcl7p and Pho85p; involved in the control of glycogen storage by Pho85p; stabilized by Elongin C binding; PCL6 has a paralog, PCL7, that arose from the whole genome duplication","termid":"PBO:0085304"}


id: GO:0004855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xanthine + H2O + O2 = urate + hydrogen peroxide.","definition_xrefs":["EC:1.17.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"xanthine oxidase activity","secondary_identifiers":["MetaCyc:XANTHINE-OXIDASE-RXN","RHEA:21132","Reactome:R-HSA-74258","Reactome:R-HSA-9748991"],"synonyms":[{"name":"Schardinger enzyme activity","type":"related"},{"name":"hypoxanthine-xanthine oxidase activity","type":"broad"},{"name":"schardinger enzyme","type":"related"},{"name":"xanthine oxidoreductase activity","type":"broad"},{"name":"xanthine:O2 oxidoreductase activity","type":"related"},{"name":"xanthine:oxygen oxidoreductase activity","type":"related"},{"name":"xanthine:xanthine oxidase activity","type":"related"}],"termid":"GO:0004855"}


id: MONDO:1011580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta, non-human animal","termid":"MONDO:1011454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, cattle","secondary_identifiers":["OMIA:000754-9913"],"termid":"MONDO:1011580","xrefs":{"Monarch":{"xref_id":"1011580"}}}


id: MONDO:1012739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any xanthinuria that occurs in dogs due to a mutation in the MOCOS gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"xanthinuria, dog","termid":"MONDO:1011623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, type II, dog","secondary_identifiers":["OMIA:001819-9615"],"synonyms":[{"name":"xanthinuria, type II, dog","type":"exact"}],"termid":"MONDO:1012739","xrefs":{"Monarch":{"xref_id":"1012739"}}}


id: GO:0046957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a cell or organism away from a source of light.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototaxis","termid":"GO:0042331"},{"relation_name":"is_a","term_name":"negative energy taxis","termid":"GO:0052129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative phototaxis","secondary_identifiers":["GO:0046955"],"synonyms":[{"name":"negative phototactic behavior","type":"exact"},{"name":"negative phototactic behaviour","type":"exact"},{"name":"negative taxis in response to light","type":"exact"}],"termid":"GO:0046957"}


id: MONDO:0016628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to a coagulation factors defect (obsolete MONDO:0016628)","secondary_identifiers":["Orphanet:248315"],"synonyms":[{"name":"rare bleeding disorder due to a coagulation factors defect","type":"narrow"},{"name":"rare coagulopathy due to a coagulation factor defect","type":"narrow"}],"termid":"MONDO:0016628","xrefs":{"Monarch":{"xref_id":"0016628"}}}


id: PBO:0058684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6812","termid":"PBO:0058684"}


id: PBO:0113056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glucose deprivation induced stress granules; involved in P-body-dependent granule assembly; regulates TORC1 signaling and autophagy; interacts with Pab1p to regulate mRNA polyadenylation; interacts with Mkt1p to regulate HO translation; regulates expression of genes involved in gluconeogenesis and mitochondrial function through multiple mechanisms","termid":"PBO:0113056"}


id: MONDO:0100381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(6;11)(q27;q23). (A cytogenetic abnormality that refers to the translocation of the long arm (q27) of chromosome 6 and the long arm (q23) of chromosome 11. It is associated with the development of de novo acute myeloid leukemia.)","definition_xrefs":["NCIT:C36610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(6;11)(q27;q23)","secondary_identifiers":["NCIT:C132105"],"synonyms":[{"name":"AML, t(6;11)(q27;q23)","type":"exact"},{"name":"AML, t(6;11)(q27;q23.3)","type":"exact"}],"termid":"MONDO:0100381","xrefs":{"Monarch":{"xref_id":"0100381"}}}


id: PBO:0003954
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.11.18","termid":"PBO:0003954"}


id: PBO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T5orf172 family protein","termid":"PBO:0001753"}


id: GO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell, as found in the eye, the primary visual organ of most organisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"},{"relation_name":"part_of","term_name":"eye morphogenesis","termid":"GO:0048592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye photoreceptor cell differentiation","termid":"GO:0001754"}


id: GO:0140671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and H2B. In budding yeast shares the histone acetylation (HAT) module of ADA2-GCN5-NGG1-SGF29 with the related SAGA complex.","definition_xrefs":["PMID:21734642","PMID:28966424","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"ADA complex","synonyms":[{"name":"ADA HAT complex","type":"exact"},{"name":"ADA histone acetyltransferase complex","type":"exact"},{"name":"Ada2/Gcn5/Ada3 transcription activator complex","type":"related"},{"name":"scADA","type":"narrow"}],"termid":"GO:0140671"}


id: MONDO:0001354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute endophthalmitis (obsolete MONDO:0001354)","termid":"MONDO:0001354","xrefs":{"Monarch":{"xref_id":"0001354"}}}


id: PBO:0042384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD276 molecule","termid":"PBO:0042384"}


id: PBO:0064072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 106","termid":"PBO:0064072"}


id: PBO:0069429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 694, pseudogene","termid":"PBO:0069429"}


id: GO:0097388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 19 (CCL19) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 19 production","synonyms":[{"name":"CCL19 production","type":"exact"},{"name":"EBI1 ligand chemokine production","type":"exact"},{"name":"ELC production","type":"exact"},{"name":"MIP-3-beta production","type":"exact"},{"name":"macrophage inflammatory protein-3-beta production","type":"exact"}],"termid":"GO:0097388"}


id: PBO:0038563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding transcription modulator","termid":"PBO:0038563"}


id: PBO:0091821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane spermine family transmembrane transporter Caf5","termid":"PBO:0091821"}


id: GO:1901727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:20497126","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylase activity (obsolete GO:1901727)","synonyms":[{"name":"activation of histone deacetylase activity","type":"narrow"},{"name":"up regulation of histone deacetylase activity","type":"exact"},{"name":"up-regulation of histone deacetylase activity","type":"exact"},{"name":"upregulation of histone deacetylase activity","type":"exact"}],"termid":"GO:1901727"}


id: PBO:0080310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 74 pseudogene","termid":"PBO:0080310"}


id: PBO:0089498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Spo7","termid":"PBO:0089498"}


id: PBO:0065094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAG2 antisense RNA 1","termid":"PBO:0065094"}


id: PBO:0048889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 9","termid":"PBO:0048889"}


id: GO:0030097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates.","definition_xrefs":["GOC:dgh","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemopoiesis","secondary_identifiers":["Wikipedia:Haematopoiesis"],"synonyms":[{"name":"blood cell biosynthesis","type":"exact"},{"name":"blood cell formation","type":"exact"},{"name":"haemopoiesis","type":"exact"},{"name":"hematopoiesis","type":"exact"}],"termid":"GO:0030097"}


id: GO:0004527
data:
  {"annotated_genes":["SJAG_01648","SJAG_02374","SJAG_00966","SJAG_04369","SJAG_03276","SJAG_03734","SJAG_05197","SJAG_06586","SJAG_05373","SJAG_00686","SJAG_01431","SJAG_00377","SJAG_04587","SJAG_04006","SJAG_02275","SJAG_04410","SJAG_04767","SJAG_02658","SJAG_04519","SJAG_04084","SJAG_01163","SJAG_04153","SJAG_02298","SJAG_04682","SJAG_02993","SJAG_01173","SJAG_03876","SJAG_01832","SJAG_02818","SJAG_01822","SJAG_03745","SJAG_01836","SJAG_04171","SJAG_04407","SJAG_16455","SJAG_03132","SJAG_03994","SJAG_01798","SJAG_05280","SJAG_00081","SJAG_00401","SJAG_00841","SJAG_04818","SJAG_00814","SJAG_04824","SJAG_02540","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95722],"is_not":false,"summary":null,"term":"GO:0004527"},{"annotations":[75188,105262,72408,103148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008408"},{"annotations":[75359,76008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[79835,63123,103990,66764,90304,102409,71222,118641,70296,74922,99265,79992,104727,105595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[88715,71656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[78676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008409"},{"annotations":[73947,70329,78142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[92022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140432"},{"annotations":[77206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[88872,73570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[97448,108076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[105244,90023],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0044692"},{"annotations":[114761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[110280,67564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004528"},{"annotations":[108102,116935,74635,77681,79277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[68750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"},{"annotations":[101362,99944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004532"},{"annotations":[74514,88875,101467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[97450,73213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester 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id: PBO:0086760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; regulated by the metal-responsive Aft1p transcription factor; highly inducible in zinc-depleted conditions; localizes to the soluble fraction; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; YOR387C has a paralog, VEL1, that arose from a single-locus duplication","termid":"PBO:0086760"}


id: PBO:0035910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5_acetylation_during_vegetative_growth","termid":"PBO:0035910"}


id: GO:0071531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a Rel homology domain (RHD) interaction.","definition_xrefs":["GOC:amm","InterPro:IPR011539"],"gene_count":0,"genotype_count":0,"name":"obsolete Rel homology domain-mediated complex assembly (obsolete GO:0071531)","synonyms":[{"name":"RHD domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071531"}


id: PBO:0041657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNG2 divergent transcript","termid":"PBO:0041657"}


id: MONDO:1012783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any spinocerebellar ataxia that occurs in dogs due to a mutation in the KCNJ10 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia, KCNJ10-related, dog","secondary_identifiers":["OMIA:002089-9615"],"synonyms":[{"name":"SAMS","type":"exact"},{"name":"SDCA1","type":"exact"},{"name":"ataxia, cerebellar, KCNJ10-related, dog","type":"exact"},{"name":"spinocerebellar ataxia with myokymia, seizures or both","type":"related"},{"name":"spongy degeneration with cerebellar ataxia 1","type":"related"}],"termid":"MONDO:1012783","xrefs":{"Monarch":{"xref_id":"1012783"}}}


id: FYPO:0004211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic spindle elongation begins, but mitotic sister chromatid segregation stops before completing separation of chromosomes, DNA remains in a single mass at or near the midpoint of the mitotic spindle, and centromeric DNA is closely associated with the mitotic spindle.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle elongation without chromosome separation","termid":"FYPO:0003758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000337","FYPO:0000641","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"mitotic spindle elongation without chromosome separation with centromeric DNA associated with spindle","synonyms":[{"name":"incomplete mitotic sister chromatid segregation, with unseparated DNA and centromeric DNA associated with spindle","type":"exact"},{"name":"mitotic spindle elongation without chromosome separation with centromeric DNA associated with spindle during vegetative growth","type":"exact"},{"name":"spindle elongation without chromosome separation with centromeric DNA associated with spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004211"}


id: PBO:0071097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 99","termid":"PBO:0071097"}


id: PBO:0054213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1593","termid":"PBO:0054213"}


id: GO:0030251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of guanylate cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase inhibitor activity","termid":"GO:0010852"},{"relation_name":"is_a","term_name":"guanylate cyclase regulator activity","termid":"GO:0030249"},{"relation_name":"negatively_regulates","term_name":"guanylate cyclase activity","termid":"GO:0004383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"negatively_regulates","termid":"GO:0016829"},{"rel_name":"negatively_regulates","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0009975"},{"rel_name":"regulates","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0009975","GO:0030234","GO:0004857","GO:0140678","GO:0003824","GO:0098772"],"is_obsolete":false,"name":"guanylate cyclase inhibitor activity","termid":"GO:0030251"}


id: MONDO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myelomonocytic leukemia (obsolete MONDO:0004968)","termid":"MONDO:0004968","xrefs":{"Monarch":{"xref_id":"0004968"}}}


id: GO:0034187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to apolipoprotein E.","definition_xrefs":["GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein E binding (obsolete GO:0034187)","synonyms":[{"name":"apolipoprotein E binding","type":"exact"}],"termid":"GO:0034187"}


id: SO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of DNA located either at the end of the transcript that causes RNA polymerase to terminate transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"},{"relation_name":"part_of","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminator","secondary_identifiers":["http://en.wikipedia.org/wiki/Terminator_(genetics)"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:terminator","type":"exact"},{"name":"terminator sequence","type":"exact"}],"termid":"SO:0000141"}


id: GO:0097587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In S. cerevisiae the complex consists of two subunits, Mlh1 and Mlh3.","definition_xrefs":["GOC:jd","PMID:10570173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MutLgamma complex","termid":"GO:0097587"}


id: GO:0042934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of achromobactin, a citrate siderophore, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"achromobactin transmembrane transporter activity","synonyms":[{"name":"achromobactin transporter activity","type":"related"}],"termid":"GO:0042934"}


id: MONDO:1012561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial fission encephalopathy, non-human animal","termid":"MONDO:1011723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission encephalopathy, dog","secondary_identifiers":["OMIA:002551-9615"],"termid":"MONDO:1012561","xrefs":{"Monarch":{"xref_id":"1012561"}}}


id: FYPO:0003203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that is curved.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"curved septum","synonyms":[{"name":"curved septum during mitotic cell cycle","type":"related"},{"name":"curved septum during vegetative growth","type":"exact"}],"termid":"FYPO:0003203"}


id: PBO:0057998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3922","termid":"PBO:0057998"}


id: PBO:0077179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 3","termid":"PBO:0077179"}


id: GO:0048655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anther wall tapetum are generated and organized. The anther wall tapetum is a layer of cells that provides a source of nutrition for the pollen grains as they mature.","definition_xrefs":["GOC:jid","GOC:sm","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"anther morphogenesis","termid":"GO:0048654"},{"relation_name":"part_of","term_name":"anther wall tapetum development","termid":"GO:0048658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum morphogenesis","synonyms":[{"name":"differentiation of tapetal layer","type":"narrow"},{"name":"tapetal layer morphogenesis","type":"broad"},{"name":"tapetum morphogenesis","type":"broad"}],"termid":"GO:0048655"}


id: PBO:0025513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, INCENP ortholog Pic1","termid":"PBO:0025513"}


id: GO:1905512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of short-term synaptic potentiation.","definition_xrefs":["PMID:15470145","GOC:TermGenie","GO_REF:0000058","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"regulates","term_name":"short-term synaptic potentiation","termid":"GO:1990926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of short-term synaptic potentiation","synonyms":[{"name":"regulation of synaptic facilitation","type":"exact"}],"termid":"GO:1905512"}


id: PBO:0075646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY4 antisense RNA 1","termid":"PBO:0075646"}


id: MONDO:0800402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the TRPM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"TRPM1-related retinopathy","termid":"MONDO:0800402","xrefs":{"Monarch":{"xref_id":"0800402"}}}


id: GO:0047349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribitol 5-phosphate + CTP = CDP-ribitol + diphosphate.","definition_xrefs":["EC:2.7.7.40","RHEA:12456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"D-ribitol-5-phosphate cytidylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02921","MetaCyc:2.7.7.40-RXN"],"synonyms":[{"name":"CDP ribitol pyrophosphorylase activity","type":"related"},{"name":"CDP-ribitol diphosphorylase activity","type":"related"},{"name":"CDP-ribitol pyrophosphorylase activity","type":"related"},{"name":"CTP:D-ribitol-5-phosphate cytidylyltransferase activity","type":"exact"},{"name":"cytidine diphosphate ribitol pyrophosphorylase activity","type":"related"},{"name":"cytidine diphosphoribitol pyrophosphorylase activity","type":"related"},{"name":"ribitol 5-phosphate cytidylyltransferase activity","type":"related"}],"termid":"GO:0047349"}


id: GO:0010393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galacturonan, a pectin polymer containing a backbone of alpha-(1->4)-linked D-galacturonic acid residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galacturonan metabolic process","synonyms":[{"name":"galacturonan metabolism","type":"exact"}],"termid":"GO:0010393"}


id: PATO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A single physical entity inhering in an bearer by virtue of the bearer's quantities or relative ratios of subparts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"composition","secondary_identifiers":["PATO:0002015"],"synonyms":[{"name":"composed of","type":"exact"},{"name":"compositionality","type":"exact"},{"name":"content","type":"exact"},{"name":"structure, composition","type":"exact"}],"termid":"PATO:0000025"}


id: MONDO:0008852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital central hypoventilation syndrome (obsolete MONDO:0008852)","secondary_identifiers":["NANDO:2200198","NANDO:2100032","NANDO:1200753"],"termid":"MONDO:0008852","xrefs":{"Monarch":{"xref_id":"0008852"}}}


id: PBO:0000759
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure uopdated","termid":"PBO:0000759"}


id: GO:0044750
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80271],"is_not":false,"summary":null,"term":"GO:0044750"}]},"cv_name":"molecular_function","definition":"Catalysis of the high-affinity transfer of nickel (Ni) cations from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transporter activity","termid":"GO:0015099"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"high-affinity nickel cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0044750","terms_by_termid":{"GO:0044750":null}}


id: PBO:0072542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 72","termid":"PBO:0072542"}


id: MONDO:1012057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"degenerative myopathy of deep pectoral muscle, non-human animal","termid":"MONDO:1011787"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myopathy of deep pectoral muscle, turkey","secondary_identifiers":["OMIA:000264-9103"],"termid":"MONDO:1012057","xrefs":{"Monarch":{"xref_id":"1012057"}}}


id: MONDO:0043005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of multiple congenital anomalies/dysmorphic syndrome that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome (obsolete MONDO:0043005)","secondary_identifiers":["Orphanet:183533"],"synonyms":[{"name":"hereditary multiple congenital anomalies/dysmorphic syndrome","type":"exact"}],"termid":"MONDO:0043005","xrefs":{"Monarch":{"xref_id":"0043005"}}}


id: PBO:0081448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 316","termid":"PBO:0081448"}


id: MONDO:1012554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical myopathy, non-human animal","termid":"MONDO:1011807"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical myopathy, horse","secondary_identifiers":["OMIA:002480-9796"],"termid":"MONDO:1012554","xrefs":{"Monarch":{"xref_id":"1012554"}}}


id: PBO:0040560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 1","termid":"PBO:0040560"}


id: PBO:0011096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxo-5-alpha-steroid 4-dehydrogenase (predicted)","termid":"PBO:0011096"}


id: PBO:0075211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin beta 1","termid":"PBO:0075211"}


id: MONDO:0016090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease","termid":"MONDO:0009499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005244","MONDO:0005559","MONDO:0005066","MONDO:0002525","MONDO:0005328"],"is_obsolete":false,"name":"late-infantile/juvenile Krabbe disease","secondary_identifiers":["SCTID:41142009","Orphanet:206443","GARD:20344"],"synonyms":[{"name":"Krabbe disease, late-onset","type":"exact"}],"termid":"MONDO:0016090","xrefs":{"Monarch":{"xref_id":"0016090"}}}


id: FYPO:0006808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules via the deadenylation-dependent pathway, which includes poly(A) tail shortening, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"abnormal deadenylation-dependent decay","synonyms":[{"name":"abnormal deadenylation-dependent decay during mitotic cell cycle","type":"related"},{"name":"abnormal deadenylation-dependent decay during vegetative growth","type":"exact"},{"name":"abnormal nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"FYPO:0006808"}


id: GO:1905710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the passage or uptake of molecules by a membrane.","definition_xrefs":["PMID:27482894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane permeability","termid":"GO:1905710"}


id: PBO:0028071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_aseptate_mononucleate_vegetative_cell","termid":"PBO:0028071"}


id: MONDO:1012155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, domestic cat","secondary_identifiers":["OMIA:000631-9685"],"termid":"MONDO:1012155","xrefs":{"Monarch":{"xref_id":"1012155"}}}


id: FYPO:0001913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ubiquitin ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal ubiquitin ligase activity","termid":"FYPO:0001912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abolished ubiquitin ligase activity","synonyms":[{"name":"abolished ubiquitin-protein ligase activity","type":"exact"},{"name":"ubiquitin ligase activity abolished","type":"exact"}],"termid":"FYPO:0001913"}


id: PBO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 12","termid":"PBO:0080177"}


id: GO:0035477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of angioblast cell migration involved in selective angioblast sprouting.","definition_xrefs":["GOC:dgh","PMID:19815777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035477"}


id: GO:0098849
data:
  {"annotated_genes":["SJAG_03497","SJAG_01351","SJAG_00988","SJAG_04516","SJAG_01344","SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71172,93633,97335,97373,108753,118535],"is_not":false,"summary":null,"term":"GO:0098849"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of cadmium cations in a cell. These include transport of cadmium cations away from sensitive areas and to compartments or complexes whose purpose is sequestration.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of cadmium ion","termid":"GO:0071585"},{"relation_name":"is_a","term_name":"cellular detoxification of metal ion","termid":"GO:0140961"},{"relation_name":"part_of","term_name":"cellular response to cadmium ion","termid":"GO:0071276"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of cadmium ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098849","terms_by_termid":{"GO:0098849":null}}


id: MONDO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-dystrophic myopathy with collagen 6 anomaly (obsolete MONDO:0016111)","secondary_identifiers":["Orphanet:206659"],"termid":"MONDO:0016111","xrefs":{"Monarch":{"xref_id":"0016111"}}}


id: GO:0033410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UAC codon-amino acid adaptor activity","synonyms":[{"name":"TAC codon-amino acid adaptor activity","type":"exact"},{"name":"tyrosine tRNA","type":"related"}],"termid":"GO:0033410"}


id: PBO:0039460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain containing 11","termid":"PBO:0039460"}


id: PBO:0040690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain amino acid transaminase 2","termid":"PBO:0040690"}


id: PBO:0064586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTEF antisense RNA 1","termid":"PBO:0064586"}


id: GO:0007625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism relating to grooming, cleaning and brushing to remove dirt and parasites.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"grooming behavior","synonyms":[{"name":"grooming behaviour","type":"exact"}],"termid":"GO:0007625"}


id: PBO:0089350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"23S rRNA/U6 snRNA (adenine-N(6))-methyltransferase Mtl16","termid":"PBO:0089350"}


id: GO:1904012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to platinum.","definition_xrefs":["GOC:TermGenie","PMID:10089464","GO_REF:0000067"],"gene_count":0,"genotype_count":0,"name":"obsolete platinum binding (obsolete GO:1904012)","termid":"GO:1904012"}


id: GO:1902487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a non-growing cell tip.","definition_xrefs":["PMID:21652630","PMID:23041194","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to non-growing cell tip","synonyms":[{"name":"protein localisation in non-growing cell tip","type":"exact"},{"name":"protein localisation to non-growing cell tip","type":"exact"},{"name":"protein localization in non-growing cell tip","type":"exact"}],"termid":"GO:1902487"}


id: GO:0031867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP4 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"EP4 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP4 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP4 receptor binding","type":"exact"}],"termid":"GO:0031867"}


id: MONDO:0044234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hrm2 (obsolete MONDO:0044234)","secondary_identifiers":["OMIM:139450"],"synonyms":[{"name":"HRM2","type":"related"},{"name":"curly hair","type":"related"},{"name":"hair curvature, variation 1N","type":"related"},{"name":"hair morphology 2","type":"related"},{"name":"hair, curly","type":"exact"}],"termid":"MONDO:0044234","xrefs":{"Monarch":{"xref_id":"0044234"}}}


id: MONDO:0034189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cholangitis","termid":"MONDO:0004789"},{"relation_name":"is_a","term_name":"autoimmune hepatitis","termid":"MONDO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005046"],"is_obsolete":false,"name":"primary biliary cholangitis/primary sclerosing cholangitis and autoimmune hepatitis overlap syndrome","secondary_identifiers":["MEDGEN:1812237","UMLS:C5680117","GARD:22250","Orphanet:562639"],"termid":"MONDO:0034189","xrefs":{"Monarch":{"xref_id":"0034189"}}}


id: FYPO:0006733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which movement of the CMG complex away from replication origins during DNA replication is normal.","definition_xrefs":["PMID:22718908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal CMG complex progression from replication origin","synonyms":[{"name":"normal CMG complex translocation from replication origin","type":"exact"},{"name":"normal replicative helicase progression from replication origin","type":"exact"}],"termid":"FYPO:0006733"}


id: GO:0090079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any selective and non-covalent interaction with a nucleic acid involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome.","definition_xrefs":["GOC:vw","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete translation regulator activity, nucleic acid binding (obsolete GO:0090079)","termid":"GO:0090079"}


id: PBO:0075208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 20","termid":"PBO:0075208"}


id: PBO:0055054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2470","termid":"PBO:0055054"}


id: PR:Q9Y7Q9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC2H8.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolite transporter C2H8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC2H8.02","synonyms":[{"name":"Spom972h-SPCC2H8.02","type":"exact"}],"termid":"PR:Q9Y7Q9"}


id: GO:0051862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of molecule(s) produced by an organism to a location inside the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"translocation of molecules into symbiont","synonyms":[{"name":"transport of molecules into symbiont","type":"exact"}],"termid":"GO:0051862"}


id: GO:0018071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + L-cysteine = nicotinamide + N2-(ADP-D-ribosyl)-L-cysteine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)-cysteine ADP-ribosyltransferase activity (obsolete GO:0018071)","termid":"GO:0018071"}


id: PBO:0049312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSTT1 antisense RNA 1","termid":"PBO:0049312"}


id: FYPO:0002309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of IMP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal IMP binding","termid":"FYPO:0002308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased IMP binding","synonyms":[{"name":"reduced IMP binding","type":"exact"}],"termid":"FYPO:0002309"}


id: GO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a protein or protein complex, to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, protein binding (obsolete GO:0000988)","synonyms":[{"name":"protein binding transcription factor activity","type":"exact"},{"name":"transcription factor activity","type":"broad"}],"termid":"GO:0000988"}


id: MONDO:0010913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Caroli disease (CD) is a rare congenital liver disease characterized by non-obstructive cystic dilatations of the intra-hepatic and rarely extra-hepatic bile ducts.","definition_xrefs":["Orphanet:53035"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary biliary tract disease (obsolete MONDO:0015509)","termid":"MONDO:0015509"},{"relation_name":"is_a","term_name":"non-neoplastic bile duct disorder","termid":"MONDO:0006322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"Caroli disease","secondary_identifiers":["UMLS:C0162510","icd11.foundation:1757434239","MESH:D016767","SCTID:717232005","EFO:1001286","OMIM:600643","NANDO:2200934","GARD:6002","DOID:0050876","MedDRA:10013003","MEDGEN:57924","NCIT:C84619","NORD:896"],"synonyms":[{"name":"CAROLI disease, isolated","type":"related"},{"name":"Caroli disease isolated","type":"related"},{"name":"congenital polycystic dilatation of intrahepatic bile ducts","type":"related"},{"name":"cystic dilatation of the intrahepatic biliary tree","type":"related"}],"termid":"MONDO:0010913","xrefs":{"Monarch":{"xref_id":"0010913"}}}


id: PR:O74810
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 K that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03517","PANTHER:PTHR24067:SF28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.20","secondary_identifiers":["UniProtKB:O74810"],"synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2K","type":"exact"},{"name":"ubiquitin carrier protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74810"}


id: GO:0047445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA + 4 H+ = 7-methyl-3-oxooct-6-enoyl-CoA + acetate.","definition_xrefs":["RHEA:23084","EC:4.1.3.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxy-3-isohexenylglutaryl-CoA lyase activity","secondary_identifiers":["KEGG_REACTION:R08090","MetaCyc:4.1.3.26-RXN","UM-BBD_reactionID:r1168"],"synonyms":[{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA acetate-lyase (7-methyl-3-oxooct-6-enoyl-CoA-forming)","type":"related"},{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA acetate-lyase activity","type":"related"},{"name":"3-hydroxy-3-isohexenylglutaryl coenzyme A lyase activity","type":"related"},{"name":"3-hydroxy-3-isohexenylglutaryl-CoA isopentenylacetoacetyl-CoA-lyase activity","type":"related"},{"name":"beta-hydroxy-beta-isohexenylglutaryl CoA-lyase activity","type":"related"},{"name":"hydroxyisohexenylglutaryl-CoA:acetatelyase activity","type":"related"}],"termid":"GO:0047445"}


id: GO:0021701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Golgi cell. Differentiation includes the processes involved in commitment of a neuroblast to a Golgi cell fate. A cerebellar Golgi cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Golgi cell differentiation","termid":"GO:0021701"}


id: MONDO:0013527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lissencephaly in which the cause of the disease is a mutation in the NDE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microlissencephaly","termid":"MONDO:0015204"},{"relation_name":"is_a","term_name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 4","secondary_identifiers":["DOID:0112235","MEDGEN:462811","UMLS:C3151461","OMIM:614019"],"synonyms":[{"name":"LIS4","type":"related"},{"name":"NDE1 lissencephaly (disease)","type":"exact"},{"name":"lissencephaly (disease) caused by mutation in NDE1","type":"exact"},{"name":"lissencephaly 4","type":"exact"},{"name":"lissencephaly 4 (with microcephaly)","type":"exact"},{"name":"lissencephaly 4 with microcephaly","type":"related"},{"name":"lissencephaly 4, with microcephaly","type":"related"},{"name":"lissencephaly type 4","type":"exact"}],"termid":"MONDO:0013527","xrefs":{"Monarch":{"xref_id":"0013527"}}}


id: GO:0033612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor that possesses protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"receptor serine/threonine kinase binding","synonyms":[{"name":"transmembrane receptor protein serine/threonine kinase ligand binding","type":"related"}],"termid":"GO:0033612"}


id: GO:0048168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of neuronal synaptic plasticity","termid":"GO:0048168"}


id: PBO:0000943
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mitochondrial signal sequence","termid":"PBO:0000943"}


id: PBO:0053277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B3","termid":"PBO:0053277"}


id: PBO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc4","termid":"PBO:0003303"}


id: PBO:0071889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 27","termid":"PBO:0071889"}


id: PBO:0040740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 6","termid":"PBO:0040740"}


id: FYPO:0006896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of mitochondria to the cell tip is decreased during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah","PMID:30649994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitochondrion localization to cell tip during meiosis","synonyms":[{"name":"decreased mitochondrial localization to cell tip during meiosis","type":"exact"},{"name":"decreased mitochondrion localisation to cell tip during meiosis","type":"exact"},{"name":"decreased mitochondrion localization to cell end during meiosis","type":"exact"},{"name":"decreased mitochondrion localization to cell tip during meiotic nuclear division","type":"exact"},{"name":"reduced mitochondrion localization to cell tip during meiosis","type":"exact"}],"termid":"FYPO:0006896"}


id: GO:0060373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the depolarizing direction away from the resting potential in a ventricular cardiomyocyte.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ventricular cardiac muscle cell membrane depolarization","synonyms":[{"name":"electrocardiogram QRS complex","type":"related"},{"name":"regulation of ventricular cardiomyocyte membrane depolarization","type":"exact"},{"name":"ventricular depolarization","type":"related"}],"termid":"GO:0060373"}


id: MONDO:0012863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 6","secondary_identifiers":["UMLS:C2676740","MEDGEN:393577","OMIM:612312"],"synonyms":[{"name":"ADHD6","type":"exact"},{"name":"attention Deficit-hyperactivity disorder, susceptibility to, type 6","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 6","type":"exact"},{"name":"digit span quantitative trait locus","type":"related"}],"termid":"MONDO:0012863","xrefs":{"Monarch":{"xref_id":"0012863"}}}


id: MONDO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth resorption","termid":"MONDO:0001670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external pathological resorption","secondary_identifiers":["ICD9:521.42","DOID:14529","MEDGEN:540236","SCTID:41918006","UMLS:C0266878"],"termid":"MONDO:0001988","xrefs":{"Monarch":{"xref_id":"0001988"}}}


id: MONDO:1011077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Rhesus monkey","secondary_identifiers":["OMIA:001033-9544"],"termid":"MONDO:1011077","xrefs":{"Monarch":{"xref_id":"1011077"}}}


id: PATO:0000130
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000130 relative weight (obsolete PATO:0000130)","termid":"PATO:0000130"}


id: PBO:0015265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II beta subunit","termid":"PBO:0015265"}


id: GO:0046270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-toluenecarboxylate biosynthetic process (obsolete GO:0046270)","synonyms":[{"name":"4-toluenecarboxylate anabolism","type":"exact"},{"name":"4-toluenecarboxylate biosynthesis","type":"exact"},{"name":"4-toluenecarboxylate biosynthetic process","type":"exact"},{"name":"4-toluenecarboxylate formation","type":"exact"},{"name":"4-toluenecarboxylate synthesis","type":"exact"}],"termid":"GO:0046270"}


id: PBO:0063643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1","termid":"PBO:0063643"}


id: GO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 4 isopentenyl diphosphate = 4 diphosphate + all-trans-heptaprenyl diphosphate.","definition_xrefs":["RHEA:27794","PMID:9708911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"heptaprenyl diphosphate synthase activity","secondary_identifiers":["MetaCyc:TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN","GO:0036422","EC:2.5.1.30"],"synonyms":[{"name":"HepPP synthase activity","type":"related"},{"name":"all-trans-heptaprenyl-diphosphate synthase activity","type":"exact"},{"name":"heptaprenyl pyrophosphate synthase activity","type":"related"},{"name":"heptaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"trans-hexaprenyltranstransferase activity","type":"exact"}],"termid":"GO:0000010"}


id: MONDO:0013482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the TCTN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 8","secondary_identifiers":["DOID:0070122","MEDGEN:854220","UMLS:C3836857","GARD:15727","OMIM:613885"],"synonyms":[{"name":"MKS8","type":"exact"},{"name":"Meckel syndrome 8","type":"related"},{"name":"Meckel syndrome caused by mutation in TCTN2","type":"exact"},{"name":"Meckel syndrome, type 8","type":"exact"},{"name":"Meckel-Gruber syndrome, type 8","type":"exact"},{"name":"TCTN2 Meckel syndrome","type":"exact"}],"termid":"MONDO:0013482","xrefs":{"Monarch":{"xref_id":"0013482"}}}


id: MONDO:0015886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of type 1 diabetes mellitus that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare diabetes mellitus type 1 (obsolete MONDO:0015886)","secondary_identifiers":["Orphanet:181371"],"synonyms":[{"name":"rare insulin-dependent diabetes mellitus","type":"exact"},{"name":"rare type 1 diabetes mellitus","type":"exact"}],"termid":"MONDO:0015886","xrefs":{"Monarch":{"xref_id":"0015886"}}}


id: GO:0045955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of calcium ion-dependent exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"is_a","term_name":"negative regulation of regulated secretory pathway","termid":"GO:1903306"},{"relation_name":"negatively_regulates","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion-dependent exocytosis","synonyms":[{"name":"down regulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"down-regulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"downregulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"inhibition of calcium ion-dependent exocytosis","type":"narrow"}],"termid":"GO:0045955"}


id: GO:0042148
data:
  {"annotated_genes":["SJAG_03221","SJAG_02267","SJAG_03751","SJAG_04950","SJAG_02708","SJAG_01708","SJAG_01410","SJAG_00757"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72597,97237],"is_not":false,"summary":null,"term":"GO:0042148"},{"annotations":[107983,99380,110633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000708"},{"annotations":[100874,88804,79232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"DNA strand invasion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"D-loop biosynthesis","type":"related"},{"name":"D-loop formation","type":"related"},{"name":"Rad51-mediated strand invasion","type":"exact"},{"name":"displacement loop biosynthesis","type":"related"},{"name":"displacement loop formation","type":"related"},{"name":"strand invasion","type":"exact"}],"termid":"GO:0042148","terms_by_termid":{"GO:0000708":null,"GO:0010774":null,"GO:0042148":null}}


id: PATO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000350 electrolyte composition value (obsolete PATO:0000350)","termid":"PATO:0000350"}


id: GO:0033202
data:
  {"annotated_genes":["SJAG_02262","SJAG_04816","SJAG_03495","SJAG_02822","SJAG_03898","SJAG_03219"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033203"},{"annotations":[96327,95201,70793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031422"},{"annotations":[109401,110650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017117"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses DNA helicase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02262":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03495":null,"SJAG_03898":null,"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA helicase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033202","terms_by_termid":{"GO:0017117":null,"GO:0031422":null,"GO:0033203":null}}


id: MONDO:0004130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anal squamous cell carcinoma characterized by the presence of malignant cells with hyperchromatic nuclei and peripheral nuclear palisading.","definition_xrefs":["NCIT:C8256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basaloid squamous cell carcinoma","termid":"MONDO:0003486"},{"relation_name":"is_a","term_name":"anal squamous cell carcinoma","termid":"MONDO:0006082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anus basaloid carcinoma","secondary_identifiers":["DOID:7174","MEDGEN:79125","UMLS:C0280470"],"synonyms":[{"name":"anal basaloid carcinoma","type":"exact"},{"name":"anus basaloid squamous cell carcinoma","type":"exact"},{"name":"basaloid carcinoma of anus","type":"exact"},{"name":"basaloid carcinoma of the anus","type":"exact"}],"termid":"MONDO:0004130","xrefs":{"Monarch":{"xref_id":"0004130"}}}


id: PBO:0008485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A-type phosphatase inhibitor Sds23/Moc1","termid":"PBO:0008485"}


id: GO:0032747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-23 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-23 production","termid":"GO:0032667"},{"relation_name":"positively_regulates","term_name":"interleukin-23 production","termid":"GO:0032627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-23 production","secondary_identifiers":["GO:0045398"],"synonyms":[{"name":"activation of interleukin-23 production","type":"narrow"},{"name":"positive regulation of IL-23 production","type":"exact"},{"name":"positive regulation of interleukin-23 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-23 production","type":"narrow"},{"name":"up regulation of interleukin-23 production","type":"exact"},{"name":"up-regulation of interleukin-23 production","type":"exact"},{"name":"upregulation of interleukin-23 production","type":"exact"}],"termid":"GO:0032747"}


id: MONDO:0041903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal infection of joint","secondary_identifiers":["icd11.foundation:1787713905","SCTID:44743006","UMLS:C0153216","MEDGEN:509210"],"synonyms":[{"name":"gonococcal arthritis","type":"related"},{"name":"gonococcal infection of joint","type":"exact"},{"name":"gonococcal joint infection","type":"related"},{"name":"gonococcal rheumatism","type":"related"}],"termid":"MONDO:0041903","xrefs":{"Monarch":{"xref_id":"0041903"}}}


id: PBO:0047360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 14","termid":"PBO:0047360"}


id: PBO:0048686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioblastoma down-regulated RNA","termid":"PBO:0048686"}


id: PBO:0062755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily M member 2 pseudogene","termid":"PBO:0062755"}


id: PBO:0067672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 853, pseudogene","termid":"PBO:0067672"}


id: MONDO:0014403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature due to GHSR deficiency is a rare, genetic, endocrine growth disease, resulting from growth hormone secretagogue receptor (GHSR) deficiency, characterized by postnatal growth delay that results in short stature (less than -2 SD). The pituitary gland is typically without morphological changes, although anterior pituitary gland hypoplasia has been reported.","definition_xrefs":["Orphanet:314811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"non-acquired pituitary hormone deficiency","termid":"MONDO:0019824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature due to GHSR deficiency","secondary_identifiers":["SCTID:766817004","UMLS:C5887324","MEDGEN:1857733","GARD:17436","OMIM:615925"],"synonyms":[{"name":"GHDP","type":"related"},{"name":"ghrelin receptor deficiency","type":"exact"},{"name":"growth hormone deficiency, isolated partial","type":"related"},{"name":"short stature due to growth hormone secretagogue receptor deficiency","type":"exact"}],"termid":"MONDO:0014403","xrefs":{"Monarch":{"xref_id":"0014403"}}}


id: PR:P41893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A low molecular weight phosphotyrosine protein phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low molecular weight phosphotyrosine protein phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.12c","secondary_identifiers":["UniProtKB:P41893"],"synonyms":[{"name":"PTPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACP1","type":"exact"},{"name":"low molecular weight cytosolic acid phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"small tyrosine phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41893"}


id: PBO:0067024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 37, pseudogene","termid":"PBO:0067024"}


id: GO:0080061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetonitrile + 2 H2O = indole-3-acetic acid + NH3.","definition_xrefs":["RHEA:45776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"indole-3-acetonitrile nitrilase activity","secondary_identifiers":["MetaCyc:RXN-1404"],"termid":"GO:0080061"}


id: PBO:0059018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 7","termid":"PBO:0059018"}


id: PBO:0109088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 2","termid":"PBO:0109088"}


id: MONDO:0011153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hyperinsulinemic hypoglycemia in which the cause of the disease is a mutation in the KCNJ11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital isolated hyperinsulinism","termid":"MONDO:0019010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"hyperinsulinemic hypoglycemia, familial, 2","secondary_identifiers":["GARD:9927","MEDGEN:419173","UMLS:C2931833","DOID:0070218","OMIM:601820"],"synonyms":[{"name":"HHF2","type":"related"},{"name":"KCNJ11 hyperinsulinemic hypoglycemia (disease)","type":"exact"},{"name":"hyperinsulinemic hypoglycemia (disease) caused by mutation in KCNJ11","type":"exact"},{"name":"hyperinsulinemic hypoglycemia due to Kir6.2 deficiency","type":"exact"},{"name":"hyperinsulinemic hypoglycemia due to focal adenomatous hyperplasia","type":"related"},{"name":"hyperinsulinemic hypoglycemia familial 2","type":"related"},{"name":"hyperinsulinemic hypoglycemia, familial, 2","type":"exact"},{"name":"hyperinsulinemic hypoglycemia, familial, type 2","type":"exact"},{"name":"hyperinsulinemic hypoglycemia, persistent","type":"related"},{"name":"hyperinsulinism, congenital","type":"related"},{"name":"hyperinsulinism, familial","type":"related"},{"name":"hyperinsulinism, neonatal","type":"related"},{"name":"nesidioblastosis","type":"related"},{"name":"persistent hyperinsulinemic hypoglycemia of infancy","type":"related"}],"termid":"MONDO:0011153","xrefs":{"Monarch":{"xref_id":"0011153"}}}


id: PATO:0000595
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased volume","synonyms":[{"name":"high volume","type":"exact"},{"name":"large volume","type":"related"}],"termid":"PATO:0000595"}


id: PBO:0074660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 49","termid":"PBO:0074660"}


id: MONDO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplasm usually occurring in infants. It is characterized by the presence of a mixture of melanin-containing epithelial cells and smaller neuroblast-like cells. It may involve the skull and facial bones, or the epididymis. It usually has a benign clinical course.","definition_xrefs":["NCIT:C3717"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"primitive neuroectodermal tumor","termid":"MONDO:0005462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotic neuroectodermal tumor","secondary_identifiers":["ICDO:9363/0","MEDGEN:60073","MESH:D017600","UMLS:C0206094","DOID:166","SCTID:404042005"],"synonyms":[{"name":"MNTI","type":"exact"},{"name":"infantile melanotic neuroectodermal neoplasm","type":"exact"},{"name":"melanotic Progonoma","type":"exact"},{"name":"melanotic neuroectodermal tumor (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumor of infancy","type":"exact"},{"name":"melanotic neuroectodermal tumor of infancy (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumour (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumour of infancy","type":"exact"},{"name":"melanotic neuroectodermal tumour of infancy (morphologic abnormality)","type":"exact"},{"name":"pigmented neuroectodermal tumor","type":"exact"},{"name":"pigmented neuroectodermal tumor of infancy","type":"exact"},{"name":"pigmented neuroectodermal tumour","type":"exact"},{"name":"pigmented neuroectodermal tumour of infancy","type":"exact"},{"name":"retinal anlage neoplasm","type":"exact"}],"termid":"MONDO:0002072","xrefs":{"Monarch":{"xref_id":"0002072"}}}


id: GO:0060134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a startle magnitude is reduced when the startling stimulus is preceded by a low-intensity prepulse.","definition_xrefs":["PMID:10341260","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"part_of","term_name":"startle response","termid":"GO:0001964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prepulse inhibition","secondary_identifiers":["Wikipedia:Prepulse_inhibition"],"synonyms":[{"name":"PPI","type":"related"},{"name":"pre-pulse inhibition","type":"exact"}],"termid":"GO:0060134"}


id: PBO:0068686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 67, pseudogene","termid":"PBO:0068686"}


id: PBO:0012275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex subunit, Far11/Csc2","termid":"PBO:0012275"}


id: PBO:0061601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBP iron-sulfur cluster assembly factor 2, cytosolic","termid":"PBO:0061601"}


id: GO:0071356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor necrosis factor","termid":"GO:0034612"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor necrosis factor","synonyms":[{"name":"cellular response to TNF","type":"exact"}],"termid":"GO:0071356"}


id: PBO:0061314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPHS1 adhesion molecule, nephrin","termid":"PBO:0061314"}


id: PBO:0066116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 10 member B","termid":"PBO:0066116"}


id: PBO:0066854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 154","termid":"PBO:0066854"}


id: GO:0047263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ceramide + UDP-galactose = D-galactosylceramide + UDP.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete N-acylsphingosine galactosyltransferase activity (obsolete GO:0047263)","termid":"GO:0047263"}


id: GO:0035771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-4 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-4","termid":"GO:0071353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-4-mediated signaling pathway","synonyms":[{"name":"IL-4-mediated signaling pathway","type":"exact"},{"name":"interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:0035771"}


id: CHEBI:27732
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine","termid":"CHEBI:27732"}


id: PATO:0001031
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to recover its size and shape after deformation in any way.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elasticity","termid":"PATO:0001031"}


id: GO:0030925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of calcium into a metallo-oxygen cluster.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium incorporation into metallo-oxygen cluster (obsolete GO:0030925)","termid":"GO:0030925"}


id: GO:0030086
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete PSII associated light-harvesting complex II, core complex, LHCIIa subcomplex (obsolete GO:0030086)","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIa subcomplex","type":"exact"}],"termid":"GO:0030086"}


id: MONDO:0009453
data:
  {"annotated_genes":["SJAG_03536","SJAG_04743","SJAG_02184","SJAG_02453","SJAG_02528","SJAG_00771","SJAG_01787","SJAG_02330","SJAG_04118","SJAG_01884","SJAG_02572","SJAG_02479","SJAG_02039","SJAG_03805","SJAG_02208","SJAG_00222","SJAG_03453","SJAG_01697","SJAG_04380","SJAG_00610","SJAG_00400","SJAG_02803"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030519"},{"annotations":[85671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[85502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[85505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[85591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[86975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013767"},{"annotations":[86146,86145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000024"},{"annotations":[86627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[86002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[86948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[86705,86704,86703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010066"},{"annotations":[86390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"},{"annotations":[86306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[85398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011971"},{"annotations":[85628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010504"},{"annotations":[86423,86424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958013"},{"annotations":[86755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[86606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00400":null,"SJAG_00610":null,"SJAG_00771":null,"SJAG_01697":null,"SJAG_01787":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02184":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_02479":null,"SJAG_02528":null,"SJAG_02572":null,"SJAG_02803":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_03805":null,"SJAG_04118":null,"SJAG_04380":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immune deficiency disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565469","OMIM:242850","UMLS:C1855771","MEDGEN:340961"],"synonyms":[{"name":"immune deficiency disease","type":"exact"}],"termid":"MONDO:0009453","terms_by_termid":{"MONDO:0010066":null,"MONDO:0010504":null,"MONDO:0010600":null,"MONDO:0011336":null,"MONDO:0011971":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0013135":null,"MONDO:0013767":null,"MONDO:0013818":null,"MONDO:0014007":null,"MONDO:0024541":null,"MONDO:0030519":null,"MONDO:0958013":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0009453"}}}


id: PBO:0000905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor Rdi1 (predicted)","termid":"PBO:0000905"}


id: GO:0006220
data:
  {"annotated_genes":["SJAG_04665","SJAG_00779","SJAG_00533","SJAG_00197","SJAG_03771","SJAG_00885","SJAG_04487","SJAG_04709","SJAG_04657","SJAG_04627","SJAG_02874","SJAG_03164","SJAG_04713","SJAG_00964","SJAG_03676","SJAG_00694","SJAG_05024","SJAG_04354","SJAG_02887","SJAG_00444","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[57233,61234,59164,61990,59498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[80736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[107577,92760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[68203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[64613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[76797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[68205,93295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[107578,95811,92761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[71356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70267,79816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[71357,92762,68976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[71355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[79789,70266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[79787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[80738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[76802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"},{"annotations":[68204,87779,93296,92293,88771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[64612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00885":null,"SJAG_00964":null,"SJAG_02874":null,"SJAG_02887":null,"SJAG_03164":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_03771":null,"SJAG_04354":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine metabolic process","type":"broad"},{"name":"pyrimidine metabolism","type":"broad"},{"name":"pyrimidine nucleotide metabolism","type":"exact"}],"termid":"GO:0006220","terms_by_termid":{"GO:0006225":null,"GO:0006226":null,"GO:0006227":null,"GO:0006228":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0006241":null,"GO:0006256":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null,"GO:0046081":null,"GO:0046704":null,"GO:0046705":null}}


id: MONDO:0018643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to localized juvenile periodontitis","secondary_identifiers":["MEDGEN:1812489","Orphanet:447740","UMLS:C5681199"],"termid":"MONDO:0018643","xrefs":{"Monarch":{"xref_id":"0018643"}}}


id: PBO:0074949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 112","termid":"PBO:0074949"}


id: PBO:0068973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 217, pseudogene","termid":"PBO:0068973"}


id: FYPO:0001314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell cortex are normal when the cell is in the vegetative growth phase of the life cycle. The cell cortex is the region of a cell that lies just beneath the plasma membrane.","definition_xrefs":["GO:0005938","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cortex morphology","termid":"FYPO:0001231"},{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cortex morphology during vegetative growth","synonyms":[{"name":"normal cell cortex morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001314"}


id: PBO:0088256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (Cdc14-related) Clp1/Flp1","termid":"PBO:0088256"}


id: PBO:0006231
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this transcript could be on either strand","termid":"PBO:0006231"}


id: GO:1905792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mechanosensory behavior.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8692859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of mechanosensory behavior","termid":"GO:1905790"},{"relation_name":"positively_regulates","term_name":"mechanosensory behavior","termid":"GO:0007638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mechanosensory behavior","synonyms":[{"name":"activation of behavioral response to mechanical stimulus","type":"narrow"},{"name":"activation of behavioural response to mechanical stimulus","type":"narrow"},{"name":"activation of mechanosensory behavior","type":"narrow"},{"name":"activation of mechanosensory behaviour","type":"narrow"},{"name":"positive regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"positive regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"positive regulation of mechanosensory behaviour","type":"exact"},{"name":"up regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"up regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"up regulation of mechanosensory behavior","type":"exact"},{"name":"up regulation of mechanosensory behaviour","type":"exact"},{"name":"up-regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"up-regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"up-regulation of mechanosensory behavior","type":"exact"},{"name":"up-regulation of mechanosensory behaviour","type":"exact"},{"name":"upregulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"upregulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"upregulation of mechanosensory behavior","type":"exact"},{"name":"upregulation of mechanosensory behaviour","type":"exact"}],"termid":"GO:1905792"}


id: PBO:0038829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 2","termid":"PBO:0038829"}


id: PBO:0050782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1F","termid":"PBO:0050782"}


id: MONDO:1011603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, crab-eating macaque","secondary_identifiers":["OMIA:000284-9541"],"termid":"MONDO:1011603","xrefs":{"Monarch":{"xref_id":"1011603"}}}


id: MONDO:0016311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Bockenheimer syndrome","secondary_identifiers":["GARD:13063","MEDGEN:1843091","icd11.foundation:1659229633","Orphanet:217008","UMLS:C5679814"],"synonyms":[{"name":"genuine diffuse phlebectasia","type":"exact"}],"termid":"MONDO:0016311","xrefs":{"Monarch":{"xref_id":"0016311"}}}


id: PBO:0059592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 4","termid":"PBO:0059592"}


id: PBO:0050448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U like 2","termid":"PBO:0050448"}


id: GO:0075212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its transmembrane receptor-mediated cAMP signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transmembrane receptor-mediated cAMP signal transduction in response to host (obsolete GO:0075212)","synonyms":[{"name":"positive regulation of symbiont transmembrane receptor-mediated cAMP signal transduction in response to host","type":"related"}],"termid":"GO:0075212"}


id: PBO:0052554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor F1","termid":"PBO:0052554"}


id: PBO:0075107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 156","termid":"PBO:0075107"}


id: PBO:0073070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDCBP2 antisense RNA 1","termid":"PBO:0073070"}


id: MONDO:0002721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ischemic or hemorrhagic necrosis of the pituitary gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrosis of pituitary","secondary_identifiers":["SCTID:59572000","UMLS:C0271558","NCIT:C27066","MEDGEN:124404","DOID:3646"],"synonyms":[{"name":"pituitary gland Necrosis","type":"exact"},{"name":"pituitary necrosis","type":"exact"}],"termid":"MONDO:0002721","xrefs":{"Monarch":{"xref_id":"0002721"}}}


id: PR:O43089
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cbp6 gene.","definition_xrefs":["UniProtKB:O43089","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome B pre-mRNA-processing protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.14c","synonyms":[{"name":"Spom972h-cbp6","type":"exact"}],"termid":"PR:O43089"}


id: PBO:0112979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease; role in preventing L-A mycovirus pathogenesis","termid":"PBO:0112979"}


id: PBO:0088240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glucose/fructose:proton symporter Ght2","termid":"PBO:0088240"}


id: PBO:0086361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ABC transporter","termid":"PBO:0086361"}


id: MONDO:0022794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A structural cytogenetic abnormality characterized by partial or complete loss of chromosome 8.","definition_xrefs":["NCIT:C36535"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monosomy","termid":"MONDO:0020639"}],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome 8 deletion (obsolete MONDO:0022794)","secondary_identifiers":["MESH:C537823"],"synonyms":[{"name":"Anomaly of chromosome pair 8","type":"related"},{"name":"Deletions of chromosome 8","type":"related"},{"name":"del(8)","type":"related"},{"name":"loss of chromosome 8","type":"related"}],"termid":"MONDO:0022794","xrefs":{"Monarch":{"xref_id":"0022794"}}}


id: PBO:0058274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4651","termid":"PBO:0058274"}


id: FYPO:0007531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is decreased at heterochromatin islands near genes that are normally expressed during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:22144463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","termid":"FYPO:0007213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007531"}


id: PBO:0091098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal importomer complex subunit Pex8","termid":"PBO:0091098"}


id: PBO:0067988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 290","termid":"PBO:0067988"}


id: PBO:0081090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 20","termid":"PBO:0081090"}


id: GO:0097647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by amylin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:12037140","GOC:bhm","PMID:10871296","PMID:18687416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor signaling pathway","termid":"GO:0097646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"amylin receptor signaling pathway","synonyms":[{"name":"amilyn receptor signalling pathway","type":"exact"}],"termid":"GO:0097647"}


id: PBO:0083851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp46p (EXOSC5)","termid":"PBO:0083851"}


id: PBO:0068003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 305","termid":"PBO:0068003"}


id: GO:0000447
data:
  {"annotated_genes":["SJAG_03796","SJAG_00955","SJAG_02250","SJAG_04174","SJAG_02644","SJAG_04916","SJAG_01551","SJAG_00965","SJAG_03425","SJAG_04524","SJAG_00897","SJAG_03952","SJAG_02553","SJAG_04582","SJAG_03234","SJAG_00772","SJAG_06613","SJAG_02547","SJAG_01623"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70728,71568,72163,73332,74854,78594,95032,96820,97111,103446,104878,105095,105983,105984,109327,113818,115637,115725,118924],"is_not":false,"summary":null,"term":"GO:0000447"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage between the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endonucleolytic cleavage at A2","type":"narrow"}],"termid":"GO:0000447","terms_by_termid":{"GO:0000447":null}}


id: GO:0061286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric capsule are generated and organized. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule morphogenesis","termid":"GO:0072128"},{"relation_name":"part_of","term_name":"mesonephric capsule development","termid":"GO:0061285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule morphogenesis","termid":"GO:0061286"}


id: PBO:0042127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 201","termid":"PBO:0042127"}


id: PATO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume quality inhering in a degenerating cell by virtue of the bearer's exhibiting an increase in volume associated with cytoplasmic abnormalities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased volume","termid":"PATO:0000595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ballooning","termid":"PATO:0002093"}


id: GO:0052177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host xylan (obsolete GO:0052177)","termid":"GO:0052177"}


id: GO:0004430
data:
  {"annotated_genes":["SJAG_00296","SJAG_05330","SJAG_01571","SJAG_04537"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72111,76784,93553],"is_not":false,"summary":null,"term":"GO:0004430"},{"annotations":[91543],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0098744"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol + ATP = a 1-phosphatidyl-1D-myo-inositol 4-phosphate + ADP + H+.","definition_xrefs":["EC:2.7.1.67","RHEA:19877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01571":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1-PHOSPHATIDYLINOSITOL-KINASE-RXN","Reactome:R-HSA-1676185","Reactome:R-HSA-1675780","Reactome:R-HSA-1675813","Reactome:R-HSA-1675883","Reactome:R-HSA-1675974","KEGG_REACTION:R03361"],"synonyms":[{"name":"PI 4-kinase activity","type":"exact"},{"name":"PI kinase activity","type":"broad"},{"name":"PI4-kinase activity","type":"exact"},{"name":"PI4K","type":"exact"},{"name":"PI4K-alpha activity","type":"exact"},{"name":"PtdIns-4-kinase activity","type":"exact"},{"name":"phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"phosphatidylinositol kinase (phosphorylating) activity","type":"broad"},{"name":"phosphatidylinositol kinase activity","type":"broad"},{"name":"type II phosphatidylinositol kinase activity","type":"related"}],"termid":"GO:0004430","terms_by_termid":{"GO:0004430":null,"GO:0098744":null}}


id: PBO:0041904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core-binding factor subunit beta","termid":"PBO:0041904"}


id: FYPO:0007746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the spindle elongates during metaphase of the first meiotic nuclear division, when elongation is normally paused.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0000631"],"is_obsolete":false,"name":"normal spindle elongation during meiotic metaphase I","synonyms":[{"name":"normal spindle elongation during meiotic metaphase I spindle phase II","type":"exact"},{"name":"normal spindle elongation during metaphase I","type":"exact"},{"name":"normal spindle elongation during metaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007746"}


id: PR:O74385
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- elp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.10","synonyms":[{"name":"Spom972h-elp6","type":"exact"}],"termid":"PR:O74385"}


id: GO:0098758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-8 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-8","synonyms":[{"name":"response to IL-8","type":"exact"}],"termid":"GO:0098758"}


id: MONDO:1011638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit hyperactivity disorder, non-human animal","secondary_identifiers":["OMIA:001882"],"termid":"MONDO:1011638","xrefs":{"Monarch":{"xref_id":"1011638"}}}


id: PBO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Chp1","termid":"PBO:0000050"}


id: GO:0052886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,9'-di-cis-zeta-carotene + a quinone = 7,9,9'-tri-cis-neurosporene + a quinol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,9'-dicis-carotene:quinone oxidoreductase activity (obsolete GO:0052886)","termid":"GO:0052886"}


id: PBO:0051634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 2","termid":"PBO:0051634"}


id: PATO:0000198
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id: GO:0140797
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id: MONDO:1012742
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id: SO:0001435
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons GCN (GCT, GCC, GCA and GCG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine","synonyms":[{"name":"A","type":"exact"},{"name":"Ala","type":"exact"}],"termid":"SO:0001435"}


id: PBO:0005901
data:
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id: GO:0000070
data:
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