# terms

id: PBO:0063095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARD3 divergent transcript","termid":"PBO:0063095"}


id: GO:0070549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An siRNA-mediated post-transcriptional gene silencing pathway that blocks the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), an siRNA will typically mediate repression of translation if the siRNA perfectly complements elements located in the 3' untranslated region of target mRNAs.","definition_xrefs":["PMID:18771919","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"siRNA-mediated post-transcriptional gene silencing","termid":"GO:0140766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"siRNA-mediated gene silencing by inhibition of translation","synonyms":[{"name":"RNA interference, negative regulation of translation","type":"exact"},{"name":"down regulation of translation involved in RNA interference","type":"broad"},{"name":"down-regulation of translation involved in RNA interference","type":"broad"},{"name":"downregulation of translation involved in RNA interference","type":"broad"},{"name":"inhibition of translation involved in RNA interference","type":"broad"},{"name":"negative regulation of translation involved in RNA interference","type":"broad"}],"termid":"GO:0070549"}


id: MONDO:0003351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm that arises from the colon. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon sarcoma","termid":"MONDO:0003352"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colon leiomyosarcoma","secondary_identifiers":["MEDGEN:232380","DOID:5259","UMLS:C1333093"],"synonyms":[{"name":"colon leiomyosarcoma","type":"exact"},{"name":"colonic leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of colon","type":"exact"},{"name":"leiomyosarcoma of the colon","type":"exact"}],"termid":"MONDO:0003351","xrefs":{"Monarch":{"xref_id":"0003351"}}}


id: MONDO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine exophthalmos","termid":"MONDO:0001509"},{"relation_name":"is_a","term_name":"facial paralysis","termid":"MONDO:0001835"},{"relation_name":"is_a","term_name":"ophthalmoplegia","termid":"MONDO:0003425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exophthalmic ophthalmoplegia","secondary_identifiers":["SCTID:69763009","UMLS:C0152135","DOID:13135","MEDGEN:508900","ICD9:376.22"],"termid":"MONDO:0001643","xrefs":{"Monarch":{"xref_id":"0001643"}}}


id: PBO:0061006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHSL1 antisense RNA 1","termid":"PBO:0061006"}


id: PR:Q9UTR6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- och1 gene.","definition_xrefs":["UniProtKB:Q9UTR6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiation-specific alpha-1,6-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.05c","synonyms":[{"name":"Spom972h-och1","type":"exact"}],"termid":"PR:Q9UTR6"}


id: PBO:0072976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2A member 2","termid":"PBO:0072976"}


id: PBO:0011430
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in vertebrate","termid":"PBO:0011430"}


id: GO:0008138
data:
  {"annotated_genes":["SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017017"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0004721","GO:0140096","GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"protein tyrosine/serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5675376","Reactome:R-HSA-5675373","Reactome:R-HSA-9652816"],"synonyms":[{"name":"dual-specificity protein phosphatase","type":"broad"}],"termid":"GO:0008138","terms_by_termid":{"GO:0017017":null}}


id: MONDO:0020228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract associated with a metabolic disease (obsolete MONDO:0020228)","secondary_identifiers":["Orphanet:98644"],"synonyms":[{"name":"metabolic disease with cataract","type":"exact"}],"termid":"MONDO:0020228","xrefs":{"Monarch":{"xref_id":"0020228"}}}


id: GO:0070519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD63, a member of the tetraspan family.","definition_xrefs":["PMID:8757325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD63 complex","synonyms":[{"name":"ITGA4-ITGB1-CD63 complex","type":"narrow"}],"termid":"GO:0070519"}


id: PBO:0046998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A1","termid":"PBO:0046998"}


id: PBO:0048573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin","termid":"PBO:0048573"}


id: GO:0006815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium/potassium transport (obsolete GO:0006815)","synonyms":[{"name":"sodium/potassium transport","type":"exact"}],"termid":"GO:0006815"}


id: FYPO:0005526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the transport of organelles or other particles along microtubules is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"decreased microtubule-based movement during vegetative growth","termid":"FYPO:0005462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased transport along microtubule during vegetative growth","synonyms":[{"name":"decreased establishment of localization by movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased microtubule-based transport during vegetative growth","type":"broad"},{"name":"decreased movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased transport along microtubule during mitotic cell cycle","type":"related"},{"name":"reduced transport along microtubule during vegetative growth","type":"exact"}],"termid":"FYPO:0005526"}


id: GO:1903878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 11-deoxycorticosterone.","definition_xrefs":["GOC:TermGenie","GO_REF:0000067","GOC:mr","PMID:10802282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"11-deoxycorticosterone binding","termid":"GO:1903878"}


id: PR:O94537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ire1 gene.","definition_xrefs":["UniProtKB:O94537","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.01","synonyms":[{"name":"Spom972h-ire1","type":"exact"}],"termid":"PR:O94537"}


id: PBO:0064100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 2","termid":"PBO:0064100"}


id: PBO:0004082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in ribosome biogenesis (predicted)","termid":"PBO:0004082"}


id: GO:0047451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-3-hydroxyoctanoyl-[acyl-carrier protein] = H2O + (2E)-octenoyl-[acyl-carrier protein].","definition_xrefs":["PMID:8910376"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity (obsolete GO:0047451)","synonyms":[{"name":"(3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] hydro-lyase activity","type":"related"},{"name":"3-hydroxyoctanoyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxyoctanoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity","type":"broad"}],"termid":"GO:0047451"}


id: GO:0046199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cresol, a mixture of the aromatic alcohol isoforms o-, p-, and m-cresol, which is obtained from coal tar or petroleum. The isomers are used as disinfectants, textile scouring agents, surfactants and as intermediates in the manufacture of salicylaldehyde, coumarin, and herbicides as well as being a major component of creosote.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cresol catabolic process","synonyms":[{"name":"cresol breakdown","type":"exact"},{"name":"cresol catabolism","type":"exact"},{"name":"cresol degradation","type":"exact"}],"termid":"GO:0046199"}


id: GO:0018961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["UM-BBD_pathwayID:pcp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentachlorophenol metabolic process","synonyms":[{"name":"PCP metabolic process","type":"exact"},{"name":"PCP metabolism","type":"exact"},{"name":"pentachlorophenol metabolism","type":"exact"}],"termid":"GO:0018961"}


id: PBO:0046984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member H, pseudogene","termid":"PBO:0046984"}


id: PBO:0026881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_production_of_siRNA_involved_in_chromatin_silencing_by_small_RNA","termid":"PBO:0026881"}


id: _global:has_part_structure_that_is_capable_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entity_and_a_process","termid":"_global:causal_relation_between_material_entity_and_a_process"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part_structure_that_is_capable_of","secondary_identifiers":["RO:0002584"],"termid":"_global:has_part_structure_that_is_capable_of"}


id: PR:O43084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3103 gene.","definition_xrefs":["UniProtKB:O43084","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3103 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.09","synonyms":[{"name":"Spom972h-hsp3103","type":"exact"},{"name":"glyoxalase 3 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43084"}


id: GO:1904163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of triglyceride homeostasis.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:rph","PMID:22541436"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of triglyceride homeostasis (obsolete GO:1904163)","synonyms":[{"name":"regulation of triacylglycerol homeostasis","type":"exact"}],"termid":"GO:1904163"}


id: PBO:0069239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 494, pseudogene","termid":"PBO:0069239"}


id: GO:0006664
data:
  {"annotated_genes":["SJAG_02523","SJAG_00831","SJAG_03292","SJAG_06383","SJAG_04975","SJAG_00506","SJAG_01570","SJAG_02488","SJAG_01416","SJAG_05311","SJAG_04913","SJAG_03672","SJAG_03015","SJAG_03878","SJAG_04337","SJAG_00295","SJAG_06425","SJAG_04878","SJAG_02168","SJAG_02804","SJAG_00068","SJAG_03066","SJAG_05327","SJAG_04924","SJAG_01860","SJAG_00846","SJAG_03115","SJAG_03953","SJAG_05278","SJAG_04119","SJAG_04165","SJAG_04881","SJAG_01227","SJAG_02776","SJAG_02913","SJAG_03801","SJAG_03506"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73849,77820,63750,76793,73068,73476,78204,104028,76777,77491,89876,63357,72157,57869,75301,75867,75896,77812,58330,60781,78230,70170,58340,62702,87751,78565,58226,77991,104090,93322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[74087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"},{"annotations":[95577,97826,112867,95468,75846,79690,92129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycolipids, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide). Some substances classified as bacterial glycolipids have the sugar group acylated by one or more fatty acids and the glycerol group may be absent.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane lipid metabolic process","termid":"GO:0006643"},{"relation_name":"is_a","term_name":"liposaccharide metabolic process","termid":"GO:1903509"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03015":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycolipid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycolipid metabolism","type":"exact"}],"termid":"GO:0006664","terms_by_termid":{"GO:0006506":null,"GO:0006676":null,"GO:0051999":null}}


id: PBO:0055860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 6","termid":"PBO:0055860"}


id: FYPO:0003070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a single-stranded DNA 5'-3' exodeoxyribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652","FYPO:0005447","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal single-stranded DNA 5'-3' exodeoxyribonuclease activity","termid":"FYPO:0003070"}


id: MONDO:0014123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DRC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 21","secondary_identifiers":["GARD:15940","UMLS:C3809087","OMIM:615294","DOID:0110596","MEDGEN:815417"],"synonyms":[{"name":"CILD21","type":"exact"},{"name":"DRC1 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 21","type":"related"},{"name":"ciliary dyskinesia, primary, 21, without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 21","type":"exact"},{"name":"primary ciliary dyskinesia 21 without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DRC1","type":"exact"},{"name":"primary ciliary dyskinesia type 21","type":"exact"}],"termid":"MONDO:0014123","xrefs":{"Monarch":{"xref_id":"0014123"}}}


id: PBO:0070171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 85 pseudogene","termid":"PBO:0070171"}


id: PBO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 1","termid":"PBO:0051929"}


id: GO:2000045
data:
  {"annotated_genes":["SJAG_00169","SJAG_01311","SJAG_03048","SJAG_04140","SJAG_01210","SJAG_03591","SJAG_01825","SJAG_02404","SJAG_00996","SJAG_03699","SJAG_02723","SJAG_00071","SJAG_02810","SJAG_00991","SJAG_02026","SJAG_03681","SJAG_05346","SJAG_01401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89266,101940,116231,109214,102678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[91631,109994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[92063,93655,92482,99197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"},{"annotations":[117401,106141,106981,102693,109509,106300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[92069,109220,116233,75137,115670,77064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any signaling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"is_a","term_name":"regulation of cell cycle G1/S phase transition","termid":"GO:1902806"},{"relation_name":"regulates","term_name":"G1/S transition of mitotic cell cycle","termid":"GO:0000082"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of G1/S transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:2000045","terms_by_termid":{"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:1900087":null,"GO:2000134":null}}


id: GO:0002886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"regulates","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"}


id: PBO:0061524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide-sensitive factor pseudogene 1","termid":"PBO:0061524"}


id: MONDO:1010305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniosynostosis, non-human animal","secondary_identifiers":["OMIA:001224"],"termid":"MONDO:1010305","xrefs":{"Monarch":{"xref_id":"1010305"}}}


id: PBO:0031862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_component_organization_phenotype","termid":"PBO:0031862"}


id: PBO:0076770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 9","termid":"PBO:0076770"}


id: MOD:00413
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a cysteine residue with biotinyl-iodoacetamidyl-3,6-dioxaoctanediamine.","definition_xrefs":["Unimod:20#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"biotinyl-iodoacetamidyl-3,6-dioxaoctanediamine derivatized cysteine","synonyms":[{"name":"Biotinyl-iodoacetamidyl-3,6-dioxaoctanediamine","type":"related"},{"name":"PEO-Iodoacetyl-LC-Biotin","type":"related"}],"termid":"MOD:00413"}


id: GO:1990669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around an ERGIC-derived vesicle to the lipid bilayer membrane of the ER. Such vesicles include COPI-coated transport vesicles involved in retrograde transport.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with endoplasmic reticulum","termid":"GO:0048279"},{"relation_name":"part_of","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with endoplasmic reticulum membrane","synonyms":[{"name":"ER-Golgi intermediate compartment derived vesicle fusion with ER membrane","type":"exact"},{"name":"endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with ER membrane","type":"exact"}],"termid":"GO:1990669"}


id: MONDO:0014469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the CLIC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 103","secondary_identifiers":["MEDGEN:863487","DOID:0110464","OMIM:616042","UMLS:C4015050","GARD:22653"],"synonyms":[{"name":"CLIC5 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"DFNB103","type":"narrow"},{"name":"autosomal recessive deafness 103","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 103","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in CLIC5","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 103","type":"narrow"},{"name":"deafness, autosomal recessive 103","type":"narrow"},{"name":"deafness, autosomal recessive type 103","type":"narrow"}],"termid":"MONDO:0014469","xrefs":{"Monarch":{"xref_id":"0014469"}}}


id: PBO:0061722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2G","termid":"PBO:0061722"}


id: PBO:0055063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2479","termid":"PBO:0055063"}


id: PR:P87314
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein hir1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.13c","synonyms":[{"name":"Spom972h-hip1","type":"exact"},{"name":"histone transcription regulator 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87314"}


id: PBO:0039270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldolase, fructose-bisphosphate B","termid":"PBO:0039270"}


id: PBO:0065696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 1","termid":"PBO:0065696"}


id: PBO:0083435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YLR040C","termid":"PBO:0083435"}


id: PBO:0040907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 11","termid":"PBO:0040907"}


id: PBO:0005269
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate disease gene for Armfield syndrome ortholog","termid":"PBO:0005269"}


id: MONDO:0006287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor that arises from the bone. It is characterized by the presence of an area of high grade sarcoma in an otherwise typical giant cell tumor (primary malignancy in giant cell tumor), or the presence of sarcoma in which the pre-existing giant cell tumor may or may not be apparent (secondary malignancy in giant cell tumor).","definition_xrefs":["NCIT:C4304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant giant cell tumor","termid":"MONDO:0002402"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignancy in giant cell tumor of bone","secondary_identifiers":["NANDO:2200052","DOID:4719","UMLS:C0334552","ICDO:9250/3","MEDGEN:87263","EFO:1000347"],"synonyms":[{"name":"Dedifferentiated giant cell tumor","type":"exact"},{"name":"Dedifferentiated giant cell tumour","type":"exact"},{"name":"OSTEOCLASTOMA, malignant","type":"exact"},{"name":"bone giant cell sarcoma","type":"exact"},{"name":"giant cell bone sarcoma","type":"exact"},{"name":"giant cell sarcoma of bone","type":"exact"},{"name":"giant cell sarcoma of the bone","type":"exact"},{"name":"giant cell tumor of bone, malignant","type":"exact"},{"name":"giant cell tumor of bone, malignant (morphologic abnormality)","type":"exact"},{"name":"giant cell tumour of bone, malignant","type":"exact"},{"name":"giant cell tumour of bone, malignant (morphologic abnormality)","type":"exact"},{"name":"malignancy in giant cell tumor of bone","type":"exact"},{"name":"malignancy in giant cell tumor of the bone","type":"exact"},{"name":"malignancy in giant cell tumour of the bone","type":"exact"},{"name":"malignant giant cell tumor of bone","type":"exact"},{"name":"malignant giant cell tumour of bone","type":"exact"}],"termid":"MONDO:0006287","xrefs":{"Monarch":{"xref_id":"0006287"}}}


id: PBO:0068970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 214, pseudogene","termid":"PBO:0068970"}


id: PBO:0089553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, unknown specificity","termid":"PBO:0089553"}


id: GO:0006688
data:
  {"annotated_genes":["SJAG_00506","SJAG_05311","SJAG_03015","SJAG_04878","SJAG_03953","SJAG_02168","SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95577,95468,92129,97826,112867,79690,75846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00506":null,"SJAG_02168":null,"SJAG_03015":null,"SJAG_03953":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycosphingolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9840309"],"synonyms":[{"name":"glycosphingolipid anabolism","type":"exact"},{"name":"glycosphingolipid biosynthesis","type":"exact"},{"name":"glycosphingolipid formation","type":"exact"},{"name":"glycosphingolipid synthesis","type":"exact"}],"termid":"GO:0006688","terms_by_termid":{"GO:0051999":null}}


id: GO:0061585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of orexin from a cell in which orexin acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion, neurotransmission","termid":"GO:0061544"},{"relation_name":"is_a","term_name":"orexin secretion","termid":"GO:0061584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"orexin secretion, neurotransmission","synonyms":[{"name":"hypocretin secretion, neurotransmission","type":"exact"}],"termid":"GO:0061585"}


id: FYPO:0007744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prophase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"spindle collapse during meiotic prophase I","synonyms":[{"name":"broken meiotic spindle during prophase I","type":"related"},{"name":"meiotic spindle breakage during prophase I","type":"exact"},{"name":"spindle collapse during prophase I of meiotic cell cycle","type":"related"},{"name":"spindle collapse during prophase of meiosis I","type":"exact"}],"termid":"FYPO:0007744"}


id: GO:0006311
data:
  {"annotated_genes":["SJAG_02267","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89615,100872],"is_not":false,"summary":null,"term":"GO:0006311"}]},"cv_name":"biological_process","definition":"The cell cycle process in which genetic information is transferred from one helix to another. It often occurs in association with general genetic recombination events, and is believed to be a straightforward consequence of the mechanisms of general recombination and DNA repair. For example, meiosis might yield three copies of the maternal version of an allele and only one copy of the paternal allele, indicating that one of the two copies of the paternal allele has been changed to a copy of the maternal allele.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02267":null,"SJAG_02460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"meiotic gene conversion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"gene conversion without reciprocal crossover","type":"exact"}],"termid":"GO:0006311","terms_by_termid":{"GO:0006311":null}}


id: PBO:0066548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 11","termid":"PBO:0066548"}


id: FYPO:0004973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere localization, a process in which a telomere is transported to, and/or maintained in, a specific location, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere localization","synonyms":[{"name":"normal telomere localisation","type":"exact"}],"termid":"FYPO:0004973"}


id: GO:0047498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate. This reaction requires Ca2+.","definition_xrefs":["PMID:34831185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase A2 activity","termid":"GO:0004623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"calcium-dependent phospholipase A2 activity","secondary_identifiers":["Reactome:R-HSA-111883","Reactome:R-HSA-111881"],"synonyms":[{"name":"calcium-dependent cytosolic phospholipase A2 activity","type":"narrow"},{"name":"calcium-dependent secreted phospholipase A2 activity","type":"narrow"}],"termid":"GO:0047498"}


id: GO:0150166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K4 acetylation.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K4 acetylation (obsolete GO:0150166)","termid":"GO:0150166"}


id: MONDO:0002610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small blood vessel hemorrhage into the skin and/or mucous membranes. Newer lesions appear reddish in color. Older lesions are usually a darker purple color and eventually become a brownish-yellow color.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"purpura","secondary_identifiers":["SCTID:387778001","MESH:D011693","DOID:3326","MEDGEN:19584","UMLS:C0034150","HP:0000979"],"synonyms":[{"name":"purpura","type":"exact"},{"name":"purpura (disease)","type":"exact"},{"name":"purpuric disorder","type":"exact"}],"termid":"MONDO:0002610","xrefs":{"Monarch":{"xref_id":"0002610"}}}


id: PBO:0050651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 1","termid":"PBO:0050651"}


id: PBO:0028094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028094"}


id: SO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H2A histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2A_acetylation_site","termid":"SO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AK9_acetylation_site","synonyms":[{"name":"H2AK9 acetylation site","type":"exact"},{"name":"H2AK9ac","type":"exact"}],"termid":"SO:0001944"}


id: MOD:00172
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-alanyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["RESID:AA0163","PubMed:7744038","PubMed:7682556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:00764","MOD:01155"],"is_obsolete":false,"name":"N-alanyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIAla","type":"exact"},{"name":"LIPID GPI-anchor amidated alanine","type":"exact"},{"name":"N-alanyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00172"}


id: PBO:0041521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 54","termid":"PBO:0041521"}


id: PBO:0069594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 869, pseudogene","termid":"PBO:0069594"}


id: GO:0061051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle hypertrophy","termid":"GO:0010613"},{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle tissue growth","termid":"GO:0055023"},{"relation_name":"is_a","term_name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"},{"relation_name":"positively_regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061051"}


id: PBO:0039630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A13","termid":"PBO:0039630"}


id: FYPO:0002014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to iron ion starvation","termid":"FYPO:0003196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during cellular response to iron ion starvation","synonyms":[{"name":"increased RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"increased RNA level during cellular response to iron ion depletion","type":"exact"},{"name":"increased RNA level during cellular response to iron ion deprivation","type":"exact"},{"name":"increased RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"increased RNA level during cellular response to iron starvation","type":"exact"},{"name":"increased RNA level during iron ion starvation","type":"exact"},{"name":"increased mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"increased transcript level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0002014"}


id: MOD:00146
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a two-iron two-sulfur cluster to tetrakis-L-cysteinyl diiron disulfide.","definition_xrefs":["PubMed:6801028","PubMed:8688437","RESID:AA0137","PubMed:7763242","PubMed:2123937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tetrakis-L-cysteinyl diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"METAL Iron-sulfur (2Fe-2S); shared with dimeric partner","type":"exact"},{"name":"tetrakis-L-cysteinyl diiron disulfide","type":"exact"},{"name":"tetrakiscysteinato-1kappa(2)S,2kappa(2)S-di-mu-sulfido-diiron","type":"exact"}],"termid":"MOD:00146"}


id: PBO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClC chloride channel (predicted)","termid":"PBO:0004232"}


id: MONDO:1011989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blindness with enlarged globe, non-human animal","secondary_identifiers":["OMIA:001367"],"termid":"MONDO:1011989","xrefs":{"Monarch":{"xref_id":"1011989"}}}


id: PBO:0024835
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae FKS2","termid":"PBO:0024835"}


id: PBO:0059914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 37","termid":"PBO:0059914"}


id: PBO:0044879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 6A","termid":"PBO:0044879"}


id: MONDO:0006484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic ductal proliferative lesion of the breast characterized by the formation of secondary lumens and prominent intraductal proliferation of a heterogeneous cellular population that may include epithelial cells, myoepithelial cells, or metaplastic apocrine cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast intraductal proliferative lesion","termid":"MONDO:0004007"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"usual ductal breast hyperplasia","secondary_identifiers":["ICD9:611.89","NCIT:C27941","SCTID:472905007","MEDGEN:759542","UMLS:C3532429","EFO:1000612"],"synonyms":[{"name":"UDH","type":"exact"},{"name":"ductal breast hyperplasia of usual type","type":"exact"},{"name":"ordinary intraductal breast hyperplasia","type":"exact"}],"termid":"MONDO:0006484","xrefs":{"Monarch":{"xref_id":"0006484"}}}


id: MONDO:0021745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A growth disorder that is observed between the ages of 2 and 15, caused by extreme emotional deprivation or stress.","definition_xrefs":["Wikipedia:Psychosocial_short_stature"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental disability","termid":"MONDO:0005287"},{"relation_name":"is_a","term_name":"pituitary dwarfism","termid":"MONDO:0006909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychosocial short stature","secondary_identifiers":["MEDGEN:264104","MESH:C535569","icd11.foundation:2088216390","SCTID:39465007","UMLS:C1455735"],"synonyms":[{"name":"Kaspar Hauser syndrome","type":"related"},{"name":"abuse dwarfism syndrome","type":"related"},{"name":"child abuse dwarfism","type":"related"},{"name":"psychosocial dwarfism","type":"related"}],"termid":"MONDO:0021745","xrefs":{"Monarch":{"xref_id":"0021745"}}}


id: PBO:0057425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548y","termid":"PBO:0057425"}


id: PBO:0087264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine-rich protein involved in PKC1 signaling pathway; protein kinase C (PKC1) signaling pathway controls cell integrity; overproduction suppresses pkc1 mutations","termid":"PBO:0087264"}


id: MONDO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube carcinoma (obsolete MONDO:0002157)","termid":"MONDO:0002157","xrefs":{"Monarch":{"xref_id":"0002157"}}}


id: MONDO:0023671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculopharyngodistal myopathy","termid":"MONDO:0025193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngodistal myopathy 3","secondary_identifiers":["DOID:0081299","MEDGEN:1794166","OMIM:619473","UMLS:C5561956"],"synonyms":[{"name":"OPDM3","type":"exact"}],"termid":"MONDO:0023671","xrefs":{"Monarch":{"xref_id":"0023671"}}}


id: MONDO:0003654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade malignant bone-forming mesenchymal neoplasm arising from the surface of the bone. It occurs in childhood and usually affects the distal posterior femur, the proximal tibia, and proximal humerus. Painless swelling is the usual clinical sign. The prognosis is usually excellent.","definition_xrefs":["NCIT:C6589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric osteosarcoma","termid":"MONDO:0002623"},{"relation_name":"is_a","term_name":"juxtacortical osteosarcoma","termid":"MONDO:0006817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood parosteal osteosarcoma","secondary_identifiers":["UMLS:C1332994","MEDGEN:272467","DOID:5809"],"synonyms":[{"name":"childhood parosteal osteogenic sarcoma","type":"exact"},{"name":"childhood parosteal osteosarcoma","type":"exact"}],"termid":"MONDO:0003654","xrefs":{"Monarch":{"xref_id":"0003654"}}}


id: MOD:01201
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-heptosyl-L-lysine.","definition_xrefs":["Unimod:490#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N6-heptosyl-L-lysine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01201"}


id: PBO:0051291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-12","termid":"PBO:0051291"}


id: GO:0017090
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located in the cell membrane, and is involved in the metabolism of peptides, including neuropeptides. The complex has metalloendopeptidase activity that catalyzes the hydrolysis of protein and peptide substrates, preferentially on carboxyl side of hydrophobic residues.","definition_xrefs":["MEROPS_fam:M12","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"meprin A complex","synonyms":[{"name":"PABA peptide hydrolase complex","type":"exact"}],"termid":"GO:0017090"}


id: PBO:0003182
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horsetail movement protein Hrs1","termid":"PBO:0003182"}


id: PBO:0076084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin 4","termid":"PBO:0076084"}


id: GO:0043306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of mast cell degranulation","termid":"GO:0043304"},{"relation_name":"positively_regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of mast cell degranulation","synonyms":[{"name":"activation of mast cell degranulation","type":"narrow"},{"name":"positive regulation of mast cell granule exocytosis","type":"exact"},{"name":"stimulation of mast cell degranulation","type":"narrow"},{"name":"up regulation of mast cell degranulation","type":"exact"},{"name":"up-regulation of mast cell degranulation","type":"exact"},{"name":"upregulation of mast cell degranulation","type":"exact"}],"termid":"GO:0043306"}


id: PBO:0031441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein_during_vegetative_growth","termid":"PBO:0031441"}


id: SO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structural variation whereby either a chromosome exists in addition to the normal chromosome complement or is lacking.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneuploid_chromosome","synonyms":[{"name":"aneuploid chromosome","type":"exact"}],"termid":"SO:0000550"}


id: GO:0002340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any B cell selection process that occurs in the bone marrow.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell selection","termid":"GO:0002339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell selection","synonyms":[{"name":"central B lymphocyte selection","type":"exact"},{"name":"central B-cell selection","type":"exact"},{"name":"central B-lymphocyte selection","type":"exact"}],"termid":"GO:0002340"}


id: GO:1902746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lens fiber cell differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:17592637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lens fiber cell differentiation","synonyms":[{"name":"regulation of lens fibre cell differentiation","type":"exact"}],"termid":"GO:1902746"}


id: MONDO:0011353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrial septal defect, secundum, with various cardiac and Noncardiac defects","secondary_identifiers":["OMIM:603642","MESH:C566351","UMLS:C1863648","MEDGEN:400350"],"synonyms":[{"name":"atrial septal defect, secundum, with various cardiac and Noncardiac defects","type":"exact"}],"termid":"MONDO:0011353","xrefs":{"Monarch":{"xref_id":"0011353"}}}


id: GO:0070434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 2 (NOD2) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070426"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070432"},{"relation_name":"positively_regulates","term_name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"positive regulation of NOD2 signaling pathway","type":"exact"},{"name":"positive regulation of nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070434"}


id: MONDO:0012467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cold-induced sweating syndrome in which the cause of the disease is a mutation in the CLCF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cold-induced sweating syndrome","termid":"MONDO:0015526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"cold-induced sweating syndrome 2","secondary_identifiers":["UMLS:C1853198","GARD:18277","MEDGEN:342816","DOID:0080330","MESH:C564791","OMIM:610313"],"synonyms":[{"name":"CISS2","type":"related"},{"name":"CLCF1 cold-induced sweating syndrome","type":"exact"},{"name":"CRISPONI/cold-induced sweating syndrome 2","type":"related"},{"name":"Crisponi/cold-induced sweating syndrome 2","type":"related"},{"name":"cold-induced sweating syndrome 2","type":"exact"},{"name":"cold-induced sweating syndrome caused by mutation in CLCF1","type":"exact"},{"name":"cold-induced sweating syndrome type 2","type":"exact"}],"termid":"MONDO:0012467","xrefs":{"Monarch":{"xref_id":"0012467"}}}


id: MONDO:0013444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the NEK8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 9","secondary_identifiers":["UMLS:C3151188","OMIM:613824","MEDGEN:462538","DOID:0111120"],"synonyms":[{"name":"NEK8 nephronophthisis (disease)","type":"exact"},{"name":"NPHP9","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in NEK8","type":"exact"},{"name":"nephronophthisis 9","type":"exact"},{"name":"nephronophthisis type 9","type":"exact"}],"termid":"MONDO:0013444","xrefs":{"Monarch":{"xref_id":"0013444"}}}


id: MONDO:0007806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotrichosis 4 (obsolete MONDO:0007806)","termid":"MONDO:0007806","xrefs":{"Monarch":{"xref_id":"0007806"}}}


id: GO:1990480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalyzes the condensation of dimethylallyl diphosphate and isopentenyl diphosphate to geranyl diphosphate, the key precursor of monoterpene biosynthesis.","definition_xrefs":["GOC:mengo_curators","PMID:10557273"],"gene_count":0,"genotype_count":0,"name":"obsolete geranyl diphosphate synthase (obsolete GO:1990480)","termid":"GO:1990480"}


id: GO:1905438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any non-canonical Wnt signaling pathway that is involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:PARL","GOC:bc","PMID:25640183","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete non-canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation (obsolete GO:1905438)","synonyms":[{"name":"beta-catenin-independent Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"beta-catenin-independent Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"beta-catenin-independent Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"beta-catenin-independent Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"beta-catenin-independent Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1905438"}


id: PBO:0039640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 3, pseudogene","termid":"PBO:0039640"}


id: PBO:0046089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2","termid":"PBO:0046089"}


id: PBO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT1 subfamily","termid":"PBO:0000809"}


id: MONDO:0019556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pressure-induced localized lipoatrophy is a rare, acquired, localized lipodystrophy characterized by band-like, horizontal, asymptomatic, lipoatrophic depressions with clinically normal overlying skin usually involving the anterolateral aspect of the thighs. An identifiable history of the repeated mechanical microtrauma due to occupational or postural habits is present.","definition_xrefs":["Orphanet:90160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lipodystrophy","termid":"MONDO:0019194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"pressure-induced localized lipoatrophy","secondary_identifiers":["MEDGEN:687584","SCTID:238898001","UMLS:C1260961","GARD:19129"],"synonyms":[{"name":"lipoatrophia semicircularis","type":"exact"},{"name":"semicircular lipoatrophy","type":"exact"}],"termid":"MONDO:0019556","xrefs":{"Monarch":{"xref_id":"0019556"}}}


id: PBO:0083219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene KCC4/YCL024W","termid":"PBO:0083219"}


id: GO:0102453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + H+ + an anthocyanidin-3-O-beta-D-glucoside = coenzyme A + H+ + an anthocyanidin-3-O-[6-O-(hydroxycinnamoyl)-beta-D-glucoside].","definition_xrefs":["GOC:pz","RHEA:35411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"anthocyanidin 3-O-glucoside 6''-O-acyltransferase activity","secondary_identifiers":["EC:2.3.1.215","MetaCyc:RXN-13959"],"termid":"GO:0102453"}


id: PR:Q01663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1-like transcription factor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:1899230","PomBase:MAH","PMID:15165244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-1-like transcription factor","termid":"PR:000027897"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1-like transcription factor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.07c","secondary_identifiers":["UniProtKB:Q01663","PR:000027898"],"synonyms":[{"name":"SPAC1783.07C","type":"related"},{"name":"Spom972h-pap1","type":"exact"}],"termid":"PR:Q01663"}


id: PBO:0076653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 10","termid":"PBO:0076653"}


id: GO:0052014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of protein macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host protein (obsolete GO:0052014)","synonyms":[{"name":"catabolism by organism of host protein","type":"exact"}],"termid":"GO:0052014"}


id: PBO:0063215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionyl-CoA carboxylase subunit beta","termid":"PBO:0063215"}


id: MONDO:0017659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperekplexia","termid":"MONDO:0017658"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic hyperekplexia","secondary_identifiers":["GARD:21282","MEDGEN:1683565","UMLS:C5191042","Orphanet:306776"],"termid":"MONDO:0017659","xrefs":{"Monarch":{"xref_id":"0017659"}}}


id: GO:0052356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of chitin in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:11085997"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont cell wall chitin (obsolete GO:0052356)","termid":"GO:0052356"}


id: GO:0044575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a cellulosome, a macromolecular multi-enzyme complex in bacteria that facilitates the breakdown of cellulase, hemicellulase and pectin in the plant cell wall.","definition_xrefs":["PMID:20373916","GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cellulosome assembly","termid":"GO:0044575"}


id: MONDO:0017276
data:
  {"annotated_genes":["SJAG_03345","SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[87046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008178"}]},"cv_name":"mondo","definition":"Frontotemporal dementia (FTD) comprises a group of neurodegenerative disorders, characterized by progressive changes in behavior, executive dysfunction and language impairment, as a result of degeneration of the medial prefrontal and frontoinsular cortices. Four clinical subtypes have been identified: semantic dementia, progressive non-fluent aphasia, behavioral variant FTD and right temporal lobar atrophy.","definition_xrefs":["Orphanet:282"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"basal ganglia disorder","termid":"MONDO:0003996"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_04489":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"frontotemporal dementia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D057180","MedDRA:10068968","NANDO:1200548","icd11.foundation:831337417","GARD:8436","NCIT:C84719","DOID:9255","UMLS:C0338451","MEDGEN:83266"],"synonyms":[{"name":"FTD","type":"exact"},{"name":"MSTD","type":"related"},{"name":"Wilhemsen-Lynch disease","type":"exact"},{"name":"frontotemporal lobar degeneration","type":"exact"},{"name":"frontotemporal lobe dementia (FLDEM)","type":"related"},{"name":"multiple system tauopathy with presenile dementia","type":"exact"},{"name":"pallidopontonigral degeneration","type":"exact"}],"termid":"MONDO:0017276","terms_by_termid":{"MONDO:0008178":null,"MONDO:0010936":null},"xrefs":{"Monarch":{"xref_id":"0017276"}}}


id: PBO:0073572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 5","termid":"PBO:0073572"}


id: PR:A6X970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.04c","synonyms":[{"name":"Spom972h-SPAC23C4.04c","type":"exact"}],"termid":"PR:A6X970"}


id: MONDO:0003022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiosarcoma occurring in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric angiosarcoma","secondary_identifiers":["UMLS:C0279988","NCIT:C9174","MEDGEN:124687","DOID:4505"],"synonyms":[{"name":"angiosarcoma","type":"broad"},{"name":"angiosarcoma (disease) of childhood","type":"exact"},{"name":"childhood angiosarcoma","type":"exact"},{"name":"childhood angiosarcoma (disease)","type":"exact"},{"name":"childhood hemangiosarcoma","type":"exact"},{"name":"paediatric angiosarcoma (disease)","type":"exact"},{"name":"paediatric hemangiosarcoma","type":"exact"},{"name":"pediatric angiosarcoma","type":"exact"},{"name":"pediatric angiosarcoma (disease)","type":"exact"},{"name":"pediatric hemangiosarcoma","type":"exact"}],"termid":"MONDO:0003022","xrefs":{"Monarch":{"xref_id":"0003022"}}}


id: PBO:0038604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase 1","termid":"PBO:0038604"}


id: PBO:0069267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 523, pseudogene","termid":"PBO:0069267"}


id: GO:0061558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a cranial ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion maturation","termid":"GO:0061553"},{"relation_name":"part_of","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion maturation","synonyms":[{"name":"cranial ganglia maturation","type":"related"}],"termid":"GO:0061558"}


id: PBO:0003502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere cap complex subunit Stn1","termid":"PBO:0003502"}


id: GO:0072153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a renal fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal interstitial fibroblast fate commitment","synonyms":[{"name":"kidney interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072153"}


id: MONDO:0020745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267"],"is_obsolete":false,"name":"ventricular arrhythmias due to cardiac ryanodine receptor calcium release deficiency syndrome","secondary_identifiers":["MEDGEN:1781114","OMIM:115000","UMLS:C5542154"],"synonyms":[{"name":"VACRDS","type":"exact"},{"name":"autosomal dominant cardiac arrhythmia (Kuhn)","type":"exact"},{"name":"cardiac arrhythmia","type":"related"},{"name":"extrasystoles","type":"related"},{"name":"ventricular arrhythmias due to cardiac ryanodine receptor calcium release deficiency syndrome","type":"exact"}],"termid":"MONDO:0020745","xrefs":{"Monarch":{"xref_id":"0020745"}}}


id: PBO:0069437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 702, pseudogene","termid":"PBO:0069437"}


id: MONDO:0022832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart disease radio ulnar synostosis intellectual disability","termid":"MONDO:0022832","xrefs":{"Monarch":{"xref_id":"0022832"}}}


id: GO:0031401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein modification process","synonyms":[{"name":"activation of protein modification","type":"narrow"},{"name":"stimulation of protein modification","type":"narrow"},{"name":"up regulation of protein modification","type":"exact"},{"name":"up-regulation of protein modification","type":"exact"},{"name":"upregulation of protein modification","type":"exact"}],"termid":"GO:0031401"}


id: MONDO:0014167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epilepsy, familial adult myoclonic in which the cause of the disease is a mutation in the CNTN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign adult familial myoclonic epilepsy","termid":"MONDO:0019448"},{"relation_name":"is_a","term_name":"epilepsy, familial adult myoclonic","termid":"MONDO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial adult myoclonic, 5","secondary_identifiers":["UMLS:C3809374","DOID:0111691","OMIM:615400","MEDGEN:815704","GARD:18086"],"synonyms":[{"name":"CNTN2 epilepsy, familial adult myoclonic","type":"exact"},{"name":"FAME5","type":"related"},{"name":"cortical myoclonic tremor with epilepsy, familial, 5","type":"related"},{"name":"epilepsy, familial ADULT myoclonic, 5","type":"related"},{"name":"epilepsy, familial adult myoclonic caused by mutation in CNTN2","type":"exact"},{"name":"epilepsy, familial adult myoclonic, 5","type":"exact"},{"name":"epilepsy, familial adult myoclonic, type 5","type":"exact"},{"name":"epilepsy, myoclonic, familial adult, 5","type":"exact"}],"termid":"MONDO:0014167","xrefs":{"Monarch":{"xref_id":"0014167"}}}


id: SO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polymeric tract, such as poly(dA), within a non_LTR_retrotransposon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"is_a","term_name":"repeat_component","termid":"SO:0000840"},{"relation_name":"part_of","term_name":"non_LTR_retrotransposon","termid":"SO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_LTR_retrotransposon_polymeric_tract","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:non_ltr_retrotransposon_polymeric_tract","type":"exact"},{"name":"non LTR retrotransposon polymeric tract","type":"exact"}],"termid":"SO:0000433"}


id: PBO:0002456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Zip1","termid":"PBO:0002456"}


id: MONDO:0016953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 2q duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the long arm (q) of chromosome 2. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 2q duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 2","termid":"MONDO:0016922"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 2","secondary_identifiers":["GARD:5340","icd11.foundation:472179859","MEDGEN:162771","Orphanet:262842","MESH:C535367","UMLS:C0795805"],"synonyms":[{"name":"2q duplication","type":"related"},{"name":"2q trisomy","type":"related"},{"name":"Duplication 2q","type":"related"},{"name":"chromosome 2q duplication","type":"related"},{"name":"partial duplication of chromosome 2q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 2","type":"exact"},{"name":"partial trisomy 2q","type":"related"},{"name":"partial trisomy of chromosome 2q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 2","type":"exact"},{"name":"trisomy 2q","type":"related"}],"termid":"MONDO:0016953","xrefs":{"Monarch":{"xref_id":"0016953"}}}


id: PBO:0059383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 8","termid":"PBO:0059383"}


id: GO:0036190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + indolin-2-one + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole-2-monooxygenase activity","secondary_identifiers":["EC:1.14.14.153","KEGG_REACTION:R07403"],"termid":"GO:0036190"}


id: GO:0034889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan hemisulfate + H2O = endosulfan monoalcohol + 2 H+ + sulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan hemisulfate sulfatase activity (obsolete GO:0034889)","termid":"GO:0034889"}


id: FYPO:0002670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-glutamate-N-acetyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-glutamate-N-acetyltransferase activity","termid":"FYPO:0002669"},{"relation_name":"is_a","term_name":"increased peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased peptide-glutamate-N-acetyltransferase activity","termid":"FYPO:0002670"}


id: SO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the macronuclei of ciliates.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macronuclear_sequence","synonyms":[{"name":"macronuclear sequence","type":"exact"}],"termid":"SO:0000083"}


id: GO:0071926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an endocannabinoid binding to a cell surface receptor. The pathway proceeds with the receptor transmitting the signal to a heterotrimeric G-protein complex and ends with regulation of a downstream cellular process, e.g. transcription. Endocannabinoids are small molecules derived from arachidonic acid, anandamide (arachidonoylethanolamide) and 2-arachidonoylglycerol.","definition_xrefs":["GOC:mah","PMID:15550444","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid signaling pathway","termid":"GO:0038171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endocannabinoid signaling pathway","synonyms":[{"name":"endocannabinoid signalling pathway","type":"exact"}],"termid":"GO:0071926"}


id: PBO:0085195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ornithine transporter of the mitochondrial inner membrane; exports ornithine from mitochondria as part of arginine biosynthesis; functionally complemented by human ortholog, SLC25A15, which is associated with hyperammonaemia-hyperornithinaemia-homocitrullinuria (HHH) syndrome, but HHH-associated variants fail to complement","termid":"PBO:0085195"}


id: GO:1901498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetralin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tetralin","termid":"GO:1901498"}


id: PBO:0077872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 3","termid":"PBO:0077872"}


id: PBO:0044551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein kinase 2","termid":"PBO:0044551"}


id: PBO:0116760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCE1 pseudogene 6","termid":"PBO:0116760"}


id: PBO:0003066
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.22","termid":"PBO:0003066"}


id: MOD:00603
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 283 is redundant with Unimod 280. Remap to MOD:00600","definition_xrefs":["Unimod:283"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00603 N-ethylation (obsolete MOD:00603)","termid":"MOD:00603"}


id: MONDO:0006624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Symptom of overactive detrusor muscle of the urinary bladder that contracts with abnormally high frequency and urgency. Overactive bladder is characterized by the frequent feeling of needing to urinate during the day, during the night, or both. urinary incontinence may or may not be present.","definition_xrefs":["MESH:D053201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overactive bladder","secondary_identifiers":["MEDGEN:168058","HP:0000012","EFO:1000781","UMLS:C0878773","DOID:0070355","icd11.foundation:1118102209","MedDRA:10020853","SCTID:236633002","ICD9:596.51"],"synonyms":[{"name":"overactive bladder","type":"exact"},{"name":"overactive bladder (disease)","type":"exact"}],"termid":"MONDO:0006624","xrefs":{"Monarch":{"xref_id":"0006624"}}}


id: PBO:0017704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC4 nonhomologous end joining factor Xrc4","termid":"PBO:0017704"}


id: PBO:0076997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 11","termid":"PBO:0076997"}


id: GO:0015471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy independent passage of nucleoside, sized less than 1000 Da, across a membrane. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"},{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nucleoside-specific channel forming porin activity","termid":"GO:0015471"}


id: PBO:0108560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Saw1","termid":"PBO:0108560"}


id: MONDO:0015953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic central nervous system and retinal vascular disease (obsolete MONDO:0015953)","secondary_identifiers":["Orphanet:183503"],"termid":"MONDO:0015953","xrefs":{"Monarch":{"xref_id":"0015953"}}}


id: FYPO:0000078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular respiration is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular respiration","synonyms":[{"name":"abnormal cellular respiration during mitotic cell cycle","type":"related"},{"name":"abnormal cellular respiration during vegetative growth","type":"exact"},{"name":"abnormal respiration","type":"broad"},{"name":"abnormal respiratory metabolism","type":"exact"},{"name":"respiratory metabolism: abnormal","type":"related"}],"termid":"FYPO:0000078"}


id: GO:0034548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-cyclopropylammeline + H2O = N-cyclopropylammelide + NH3.","definition_xrefs":["UM-BBD_reactionID:r0826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"N-cyclopropylammeline deaminase activity","secondary_identifiers":["MetaCyc:RXN-8019"],"termid":"GO:0034548"}


id: GO:0099118
data:
  {"annotated_genes":["SJAG_01371","SJAG_01775","SJAG_01211","SJAG_05220","SJAG_00851","SJAG_02336","SJAG_00918","SJAG_05266","SJAG_05319","SJAG_03437","SJAG_01224","SJAG_01297","SJAG_02731","SJAG_02761","SJAG_01546","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[118998,104220,108587,100710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[109211,110218,97097,98948,107824,90070,114427,117246,100847,91306,89465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the transport of proteins.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02336":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"microtubule-based protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099118","terms_by_termid":{"GO:0099117":null,"GO:0140210":null,"GO:1990976":null}}


id: PBO:0088732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Lsb5","termid":"PBO:0088732"}


id: PBO:0088192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcriptional repressor; cooperates with Mig1p in glucose-induced gene repression; under low glucose conditions relocalizes to mitochondrion, where it interacts with Ups1p, antagonizes mitochondrial fission factor Dnm1p, indicative of a role in mitochondrial fusion or regulating morphology; regulates filamentous growth in response to glucose depletion; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0088192"}


id: MONDO:0006955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoinflammatory condition following an infection with Group A Beta Hemolytic Streptococcus (GABHS), in which the heart is attacked by antibodies formed in reaction to a recent GABHS infection. Chief anatomic changes of the valve include leaflet thickening, commissural fusion, and shortening and thickening of the tendinous cords, all of which can result in valvular dysfunction.","definition_xrefs":["NCIT:C34882"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"heart valve disorder","termid":"MONDO:0002869"},{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"rheumatic heart disease","secondary_identifiers":["MESH:D012214","MedDRA:10062110","DOID:0050827","ICD9:398.90","ICD9:398.99","SCTID:23685000","EFO:1001161","UMLS:C0035439","MEDGEN:20565"],"synonyms":[{"name":"RHD","type":"exact"},{"name":"disease, rheumatic heart","type":"exact"},{"name":"heart disease, rheumatic","type":"exact"},{"name":"rheumatic carditis","type":"exact"}],"termid":"MONDO:0006955","xrefs":{"Monarch":{"xref_id":"0006955"}}}


id: PBO:0002425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron transport multicopper oxidase Fio1","termid":"PBO:0002425"}


id: PBO:0074273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 14","termid":"PBO:0074273"}


id: PBO:0113125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential core component of the TIM23 protein translocase complex; forms the protein translocation path with Mgr2p, while Tim23p contributes to the architecture of the import channel; may link the import motor to the core translocase of the inner mitochondrial membrane (TIM23 complex)","termid":"PBO:0113125"}


id: PR:O59838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pss1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein homolog pss1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC110.04c","synonyms":[{"name":"Spom972h-pss1","type":"exact"}],"termid":"PR:O59838"}


id: FYPO:0000904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization or depolymerization, by the addition or removal of tubulin dimers respectively, occurs to a lesser extent than normal. Microtubules are thus less dynamic than normal.","definition_xrefs":["GO:0031109","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased microtubule polymerization or depolymerization","synonyms":[{"name":"decreased microtubule dynamicity","type":"related"},{"name":"decreased microtubule growth or shrinkage","type":"related"},{"name":"decreased microtubule polymerisation or depolymerisation","type":"exact"},{"name":"decreased microtubule polymerization or depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule polymerization or depolymerization during vegetative growth","type":"exact"},{"name":"reduced microtubule polymerization or depolymerization","type":"exact"}],"termid":"FYPO:0000904"}


id: PBO:0005081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA synthetase (predicted)","termid":"PBO:0005081"}


id: GO:0045295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catenin complex gamma subunit.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"gamma-catenin binding","synonyms":[{"name":"plakoglobin binding","type":"exact"}],"termid":"GO:0045295"}


id: PBO:0038388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_region","termid":"PBO:0038388"}


id: GO:0060135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the mother that allows an embryo or fetus to develop within it.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal process involved in female pregnancy","termid":"GO:0060135"}


id: PBO:0003095
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.44","termid":"PBO:0003095"}


id: PBO:0085579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p; NGL2 has a paralog, NGL3, that arose from the whole genome duplication","termid":"PBO:0085579"}


id: PBO:0031721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_distribution","termid":"PBO:0031721"}


id: PBO:0029006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intron-specific_abnormal_mRNA_splicing,_via_spliceosome","termid":"PBO:0029006"}


id: FYPO:0000637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal in a medium containing glucose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"},{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0005447","FYPO:0001985","FYPO:0002057","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth rate on glucose carbon source","synonyms":[{"name":"enhanced growth on glucose","type":"related"},{"name":"fast cell population growth on glucose carbon source","type":"exact"},{"name":"increased cell population proliferation on glucose carbon source","type":"related"},{"name":"increased cell proliferation on glucose carbon source","type":"related"},{"name":"increased vegetative cell population growth rate on glucose carbon source","type":"exact"}],"termid":"FYPO:0000637"}


id: PATO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's forming a bundle of aligned anatomical fibers, as of muscle or nerve.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciculation","termid":"PATO:0002013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculated","synonyms":[{"name":"fascicled","type":"exact"}],"termid":"PATO:0001861"}


id: PBO:0064526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit F","termid":"PBO:0064526"}


id: PBO:0053882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1162","termid":"PBO:0053882"}


id: PBO:0090953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER sphingosine hydroxylase Scs7","termid":"PBO:0090953"}


id: PBO:0017794
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDC14A","termid":"PBO:0017794"}


id: GO:0010267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional trans-acting small interfering RNA (ta-siRNA). ta-siRNAs function like miRNAs to guide cleavage of target mRNAs.","definition_xrefs":["GOC:tb","PMID:16129836","PMID:20687832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siRNA processing","termid":"GO:0030422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"ta-siRNA processing","synonyms":[{"name":"RNA interference, production of ta-siRNAs","type":"exact"},{"name":"primary ta-siRNA processing","type":"exact"},{"name":"production of small RNA involved in gene silencing by RNA","type":"narrow"},{"name":"production of ta-siRNAs involved in RNA interference","type":"exact"}],"termid":"GO:0010267"}


id: GO:0140064
data:
  {"annotated_genes":["SJAG_02990","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91740,99292],"is_not":false,"summary":null,"term":"GO:0140064"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: crotonyl-CoA + lysine in peptide = CoA + N-crotonyl-lysine-peptide.","definition_xrefs":["PMID:25818647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02773":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"peptide crotonyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:53908"],"synonyms":[{"name":"protein crotonyltransferase activity","type":"related"}],"termid":"GO:0140064","terms_by_termid":{"GO:0140064":null}}


id: GO:0010264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytic acid, myo-inositol hexakisphosphate, a regulator of intracellular signaling, a highly abundant animal anti-nutrient and a phosphate and mineral storage compound in plant seeds.","definition_xrefs":["PMID:16107538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"},{"relation_name":"is_a","term_name":"myo-inositol hexakisphosphate metabolic process","termid":"GO:0033517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate biosynthetic process","synonyms":[{"name":"myo-inositol hexakisphosphate anabolism","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthesis","type":"exact"},{"name":"myo-inositol hexakisphosphate formation","type":"exact"},{"name":"myo-inositol hexakisphosphate synthesis","type":"exact"},{"name":"phytate biosynthesis","type":"exact"},{"name":"phytate biosynthetic process","type":"exact"}],"termid":"GO:0010264"}


id: PBO:0002693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication termination factor Rtf1","termid":"PBO:0002693"}


id: FYPO:0008349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-nucleotidase activity is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal 5'-nucleotidase activity","termid":"FYPO:0008349"}


id: PATO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having a fringe or border of hairlike or fingerlike projections.","definition_xrefs":["PATO:WS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fimbriated","termid":"PATO:0002311"}


id: GO:1990134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An apoptotic process in a palatal shelf epithelial cell that contributes to the shaping of the palatal shelf.","definition_xrefs":["PMID:16607638","GOC:mtg_apoptosis","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"},{"relation_name":"part_of","term_name":"secondary palate development","termid":"GO:0062009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell apoptotic process involved in palatal shelf morphogenesis","termid":"GO:1990134"}


id: PBO:0062111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 10 pseudogene","termid":"PBO:0062111"}


id: PBO:0053671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 852","termid":"PBO:0053671"}


id: PBO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.20","termid":"PBO:0001916"}


id: FYPO:0006679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chromium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on chromium","synonyms":[{"name":"normal cell population growth in presence of chromium","type":"exact"},{"name":"normal cell population growth on chromium","type":"exact"},{"name":"normal cell population growth on chromium ion","type":"exact"},{"name":"normal cellular response to chromium","type":"related"},{"name":"normal growth on chromium ions","type":"exact"},{"name":"normal vegetative cell population growth on chromium","type":"exact"}],"termid":"FYPO:0006679"}


id: PBO:0089711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2456 family conserved fungal protein","termid":"PBO:0089711"}


id: MONDO:0008990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cleft larynx, posterior","secondary_identifiers":["GARD:4015","OMIM:215800","Orphanet:2005","MEDGEN:349091","UMLS:C1859083"],"synonyms":[{"name":"Novak syndrome","type":"related"},{"name":"cleft larynx, posterior","type":"exact"},{"name":"laryngotracheoesophageal cleft pulmonary hypoplasia","type":"related"},{"name":"stridor, congenital","type":"related"}],"termid":"MONDO:0008990","xrefs":{"Monarch":{"xref_id":"0008990"}}}


id: PBO:0015242
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(4)","termid":"PBO:0015242"}


id: MONDO:0011547
data:
  {"annotated_genes":["SJAG_01242"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87253],"is_not":false,"summary":null,"term":"MONDO:0011547"}]},"cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CHMP4B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 31 multiple types","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535343","UMLS:C1854311","DOID:0110265","OMIM:605387","MEDGEN:343089"],"synonyms":[{"name":"CHMP4B early-onset non-syndromic cataract","type":"exact"},{"name":"CPP3","type":"narrow"},{"name":"CTPP3","type":"narrow"},{"name":"CTRCT31","type":"exact"},{"name":"cataract 31, multiple types","type":"related"},{"name":"cataract, posterior polar, 3","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in CHMP4B","type":"exact"},{"name":"posterior polar cataract 3","type":"narrow"}],"termid":"MONDO:0011547","terms_by_termid":{"MONDO:0011547":null},"xrefs":{"Monarch":{"xref_id":"0011547"}}}


id: FYPO:0005256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a carboxypeptidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal carboxypeptidase activity","termid":"FYPO:0005255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased carboxypeptidase activity","synonyms":[{"name":"reduced carboxypeptidase activity","type":"exact"}],"termid":"FYPO:0005256"}


id: GO:0048169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuronal synaptic plasticity","termid":"GO:0048168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of long-term neuronal synaptic plasticity","termid":"GO:0048169"}


id: PBO:0048548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor independent 1B transcriptional repressor","termid":"PBO:0048548"}


id: GO:0110108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of imaginal disc-derived wing vein specification.","definition_xrefs":["PMID:11861482","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived wing vein specification","termid":"GO:0110107"},{"relation_name":"positively_regulates","term_name":"imaginal disc-derived wing vein specification","termid":"GO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of imaginal disc-derived wing vein specification","termid":"GO:0110108"}


id: GO:1902206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-2-mediated signaling pathway.","definition_xrefs":["PMID:11909529","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-2-mediated signaling pathway","termid":"GO:1902205"},{"relation_name":"negatively_regulates","term_name":"interleukin-2-mediated signaling pathway","termid":"GO:0038110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-2-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-2-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-2-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-2-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:1902206"}


id: PBO:0040968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 39","termid":"PBO:0040968"}


id: MONDO:0004517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tuberculosis that involves the ureter.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureteral disorder","termid":"MONDO:0001926"},{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureter tuberculosis","secondary_identifiers":["DOID:827","ICD9:016.2","ICD9:016.20","MEDGEN:509076","UMLS:C0152800","SCTID:81359005"],"synonyms":[{"name":"tuberculosis of ureter","type":"exact"},{"name":"ureter tuberculosis","type":"exact"}],"termid":"MONDO:0004517","xrefs":{"Monarch":{"xref_id":"0004517"}}}


id: GO:0017130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence of cytosine residues in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-pyrimidine tract binding","termid":"GO:0008187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"poly(C) RNA binding","synonyms":[{"name":"poly(C) binding","type":"broad"},{"name":"poly(rC) binding","type":"exact"}],"termid":"GO:0017130"}


id: PBO:0038778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor type 1C","termid":"PBO:0038778"}


id: MONDO:0004976
data:
  {"annotated_genes":["SJAG_03923","SJAG_02289","SJAG_00668","SJAG_03598","SJAG_02509","SJAG_03345","SJAG_03170","SJAG_00053","SJAG_04387","SJAG_02242","SJAG_01317","SJAG_07000","SJAG_04489","SJAG_02695","SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[87599,85570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[87101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[87212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[85977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[85723,85724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[86837,86836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[86964,86963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[87068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[85651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[87589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","definition":"Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease characterized by progressive muscular paralysis reflecting degeneration of motor neurons in the primary motor cortex, corticospinal tracts, brainstem and spinal cord.","definition_xrefs":["Orphanet:803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior horn disorder","termid":"MONDO:0003182"},{"relation_name":"is_a","term_name":"motor neuron disorder","termid":"MONDO:0020128"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00668":null,"SJAG_01317":null,"SJAG_02242":null,"SJAG_02289":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03598":null,"SJAG_03923":null,"SJAG_04178":null,"SJAG_04387":null,"SJAG_04489":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0007354","MedDRA:10002026","icd11.foundation:1982355687","GARD:5786","MESH:D000690","NORD:768","ICD10CM:G12.21","MEDGEN:274","DOID:332","NCIT:C34373","NIFSTD:birnlex_12566","NANDO:1200002","UMLS:C0002736","ICD9:335.20","SCTID:86044005"],"synonyms":[{"name":"ALS","type":"exact"},{"name":"Charcot disease","type":"exact"},{"name":"Lou Gehrig disease","type":"exact"},{"name":"Lou Gehrig's disease","type":"exact"},{"name":"amyotrophic lateral sclerosis","type":"exact"},{"name":"motor neuron disease, bulbar","type":"exact"}],"termid":"MONDO:0004976","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008458":null,"MONDO:0010459":null,"MONDO:0010936":null,"MONDO:0011223":null,"MONDO:0012077":null,"MONDO:0012945":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0014531":null,"MONDO:0859529":null},"xrefs":{"Monarch":{"xref_id":"0004976"}}}


id: GO:0075159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075159)","synonyms":[{"name":"regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075159"}


id: PBO:0027783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation","termid":"PBO:0027783"}


id: PBO:0075627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein","termid":"PBO:0075627"}


id: GO:1901011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (S)-reticuline.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-reticuline catabolic process (obsolete GO:1901011)","synonyms":[{"name":"(S)-reticuline breakdown","type":"exact"},{"name":"(S)-reticuline catabolism","type":"exact"},{"name":"(S)-reticuline degradation","type":"exact"}],"termid":"GO:1901011"}


id: MONDO:0006620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polypoid lesion that arises from the vulva and is characterized by the presence of fibrovascular stroma lined by squamous epithelium. There is no evidence of epithelial atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin tag","termid":"MONDO:0004026"},{"relation_name":"is_a","term_name":"polyp of vulva","termid":"MONDO:0021396"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulva fibroepithelial polyp","secondary_identifiers":["DOID:8255","NCIT:C6857","MEDGEN:237054","UMLS:C1336978"],"synonyms":[{"name":"fibroepithelial polyp of the vulva","type":"exact"},{"name":"fibroepithelial polyp of vulva","type":"exact"},{"name":"mammalian vulva skin tag","type":"exact"},{"name":"skin tag of mammalian vulva","type":"exact"},{"name":"vulval fibroepithelial polyp","type":"exact"},{"name":"vulvar fibroepithelial polyp","type":"exact"},{"name":"vulvar fibroepithelial stromal polyp","type":"exact"}],"termid":"MONDO:0006620","xrefs":{"Monarch":{"xref_id":"0006620"}}}


id: GO:0100023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates meiotic nuclear division.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of meiotic nuclear division by transcription from RNA polymerase II promoter (obsolete GO:0100023)","termid":"GO:0100023"}


id: GO:0033793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 2',4,4',6'-tetrahydroxychalcone 4'-O-beta-D-glucoside + H+ + O2 = aureusidin 6-O-beta-glucoside + H2O, 2 2',3,4,4',6'-pentahydroxychalcone 4'-O-beta-D-glucoside + 2 H+ + O2 = 2 aureusidin 6-O-beta-glucoside + 2 H2O, and 2',3,4,4',6'-pentahydroxychalcone 4'-O-beta-D-glucoside + H+ + O2 = bracteatin 6-O-beta-glucoside + H2O. This activity consists of two separate chemical transformations: 3-hydroxylation and oxidative cyclization (2',-dehydrogenation).","definition_xrefs":["EC:1.21.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aureusidin synthase activity","synonyms":[{"name":"2',4,4',6'-tetrahydroxychalcone:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0033793"}


id: GO:0010992
data:
  {"annotated_genes":["SJAG_00312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72628],"is_not":false,"summary":null,"term":"GO:0010992"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of ubiquitin monomers and free ubiquitin chains at the level of the cell by recycling ubiquitin from proteasome-bound ubiquitinated intermediates.","definition_xrefs":["GOC:dph","PMID:19410548","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ubiquitin recycling","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0010993"],"synonyms":[{"name":"regulation of ubiquitin homeostasis","type":"narrow"},{"name":"ubiquitin homeostasis","type":"related"}],"termid":"GO:0010992","terms_by_termid":{"GO:0010992":null}}


id: PBO:0048836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 3","termid":"PBO:0048836"}


id: FYPO:0000507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export does not occur. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished nuclear export","synonyms":[{"name":"abolished nuclear export during mitotic cell cycle","type":"related"},{"name":"absent nuclear export","type":"exact"},{"name":"nuclear export abolished","type":"exact"},{"name":"nuclear export abolished during vegetative growth","type":"exact"},{"name":"nuclear export: absent","type":"related"}],"termid":"FYPO:0000507"}


id: SO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 2nd residue (an arginine), from the start of the H3 protein is mono-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3R2_monomethylation_site","synonyms":[{"name":" H3R2me1","type":"exact"},{"name":"H3R2 monomethylation site","type":"exact"}],"termid":"SO:0001947"}


id: PBO:0081319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 101 pseudogene 2","termid":"PBO:0081319"}


id: PR:O42935
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3201 gene.","definition_xrefs":["UniProtKB:O42935","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.11","synonyms":[{"name":"Spom972h-rpl3201","type":"exact"}],"termid":"PR:O42935"}


id: MONDO:0040503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any blepharo-cheilo-odontic syndrome in which the cause of the disease is a mutation in the CTNND1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharocheilodontic syndrome","termid":"MONDO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"blepharocheilodontic syndrome 2","secondary_identifiers":["OMIM:617681","UMLS:C4540127","DOID:0080346","GARD:16244","MEDGEN:1623594"],"synonyms":[{"name":"BCDS2","type":"related"},{"name":"BLEPHAROCHEILODONTIC syndrome 2","type":"related"},{"name":"CTNND1 blepharo-cheilo-odontic syndrome","type":"exact"},{"name":"blepharo-cheilo-odontic syndrome caused by mutation in CTNND1","type":"exact"}],"termid":"MONDO:0040503","xrefs":{"Monarch":{"xref_id":"0040503"}}}


id: MONDO:1011606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vestibular disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular disease, non-human animal","termid":"MONDO:1011414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular disease, dog","secondary_identifiers":["OMIA:002263-9615"],"termid":"MONDO:1011606","xrefs":{"Monarch":{"xref_id":"1011606"}}}


id: MONDO:0018106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary xanthinuria is a purine metabolism disorder due to inherited deficiency of the xanthine dehydrogenase/oxidase enzyme and is characterized by very low (or undetectable) concentrations of uric acid in blood and urine and very high concentration of xanthine in urine, leading to urolithiasis.","definition_xrefs":["Orphanet:3467"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"xanthinuria","termid":"MONDO:0000721"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"hereditary xanthinuria","secondary_identifiers":["GARD:16628","UMLS:C5779508","SCTID:54627004","MEDGEN:1830243","HP:0010934","OMIMPS:278300","ICD9:277.2","DOID:0060236"],"synonyms":[{"name":"classic xanthinuria","type":"exact"},{"name":"hereditary xanthinuria","type":"exact"},{"name":"xanthic urolithiasis","type":"exact"},{"name":"xanthine dehydrogenase deficiency","type":"exact"},{"name":"xanthine stone disease","type":"exact"},{"name":"xanthinuria","type":"related"}],"termid":"MONDO:0018106","xrefs":{"Monarch":{"xref_id":"0018106"}}}


id: PBO:0068654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 35, pseudogene","termid":"PBO:0068654"}


id: PBO:0005350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-factor pheromone Map2","termid":"PBO:0005350"}


id: PBO:0089611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit C, Pcf3","termid":"PBO:0089611"}


id: MONDO:0002188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from sweat glands in the vulva and is characterized by the presence of lobules composed of epithelial cells with clear cytoplasm.","definition_xrefs":["NCIT:C40312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"},{"relation_name":"is_a","term_name":"nodular hidradenoma","termid":"MONDO:0002189"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"},{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vulvar nodular hidradenoma","secondary_identifiers":["DOID:2060","MEDGEN:276994","UMLS:C1520091"],"synonyms":[{"name":"mammalian vulva nodular hidradenoma","type":"exact"},{"name":"nodular hidradenoma of mammalian vulva","type":"exact"},{"name":"vulvar nodular hidradenoma","type":"exact"}],"termid":"MONDO:0002188","xrefs":{"Monarch":{"xref_id":"0002188"}}}


id: PBO:0075452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 4","termid":"PBO:0075452"}


id: MOD:00126
data:
  {"annotated_genes":["SJAG_00464"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[81030],"is_not":false,"summary":null,"term":"MOD:00126"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-biotinyl-L-lysine.","definition_xrefs":["DeltaMass:305","PubMed:16109483","PubMed:3178228","RESID:AA0117","Unimod:3#K","PubMed:7948875","PubMed:8747466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"biotinylated residue","termid":"MOD:01885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-biotinyl-L-lysine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"(2S)-2-amino-6-(5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoylamino)hexanoic acid","type":"exact"},{"name":"(3aS-(3aalpha,4beta,6aalpha))-N6-(5-(hexahydro-2-oxo-1H-thieno(3,4-d)imidazol-4-yl)-1-oxopentyl)-L-lysine","type":"exact"},{"name":"Biotin","type":"related"},{"name":"Biotinylation","type":"related"},{"name":"MOD_RES N6-biotinyllysine","type":"exact"},{"name":"N6-[5-((3aS,4S,6aR)-hexahydro-2-oxo-1H-thieno[3,4-d]imidazol-4-yl)-1-oxopentyl]-L-lysine","type":"exact"},{"name":"N6-biotinyl-L-lysine","type":"exact"},{"name":"N6-biotinyllysine","type":"exact"},{"name":"N6BtnLys","type":"exact"},{"name":"biocytin","type":"exact"},{"name":"biotinyl lysyl","type":"exact"},{"name":"epsilon-N-biotinyllysine","type":"exact"}],"termid":"MOD:00126","terms_by_termid":{"MOD:00126":null}}


id: MOD:00978
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piperidine adduct to C-terminal Cys","termid":"MOD:00978"}


id: MONDO:0100251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"familial hyperphosphatemic tumoral calcinosis/hyperphosphatemic hyperostosis syndrome","secondary_identifiers":["UMLS:C1876187","GARD:10879","DOID:0111063","MEDGEN:360297","Orphanet:306661","NCIT:C131851"],"synonyms":[{"name":"HFTC","type":"exact"},{"name":"HHS","type":"broad"},{"name":"PHPTC","type":"exact"},{"name":"cortical hyperostosis with hyperphosphatemia","type":"exact"},{"name":"familial Teutschlaender disease","type":"exact"},{"name":"familial hyperphosphatemic tumoral calcinosis/hyperphosphatemic hyperostosis syndrome","type":"exact"},{"name":"hypercalcemic tumoral calcinosis","type":"exact"},{"name":"hyperostosis with hyperphosphatemia","type":"exact"},{"name":"hyperphosphatemia hyperostosis","type":"exact"},{"name":"hyperphosphatemia hyperostosis syndrome","type":"exact"},{"name":"hyperphosphatemia tumoral calcinosis","type":"exact"},{"name":"hyperphosphatemic familial tumoral calcinosis","type":"exact"},{"name":"lipocalcinogranulomatosis","type":"exact"},{"name":"morbus Teutschlaender","type":"exact"},{"name":"primary hyperphosphatemic tumoral calcinosis","type":"exact"},{"name":"tumoral calcinosis with hyperphosphatemia","type":"exact"},{"name":"tumoral calcinosis, hyperphosphatemic, familial, 1","type":"related"}],"termid":"MONDO:0100251","xrefs":{"Monarch":{"xref_id":"0100251"}}}


id: MONDO:0044926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma, predominantly squamous cell, arising from the epithelial cells of the oropharynx.","definition_xrefs":["NCIT:C9105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"oropharynx cancer","termid":"MONDO:0004608"},{"relation_name":"is_a","term_name":"carcinoma of pharynx","termid":"MONDO:0021345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"oropharyngeal carcinoma","secondary_identifiers":["MEDGEN:379086","UMLS:C2349952"],"synonyms":[{"name":"cancer of oropharynx","type":"broad"},{"name":"cancer of the oropharynx","type":"broad"},{"name":"carcinoma of oropharynx","type":"exact"},{"name":"carcinoma of the oropharynx","type":"exact"},{"name":"oropharyngeal cancer","type":"broad"},{"name":"oropharyngeal carcinoma","type":"exact"},{"name":"oropharyngeal throat cancer","type":"broad"},{"name":"oropharynx carcinoma","type":"exact"}],"termid":"MONDO:0044926","xrefs":{"Monarch":{"xref_id":"0044926"}}}


id: MONDO:0015692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Refractory anemia with excess blasts in transformation (RAEB-T) is characterized by dysplastic features of the myeloid and usually erythroid progenitor cells in the bone marrow and an increased number of myeloblasts in the peripheral blood. The peripheral blood blast count ranges from 20% to 30%. RAEB-T used to be a subcategory of myelodysplastic syndromes in the past. Recently, the term has been eliminated from the WHO based classification of myelodysplastic syndromes. The reason is that the percentage of peripheral blood blasts required for the diagnosis of acute myeloid leukemia has been reduced to 20%. The elimination of the RAEB-T term by the WHO experts has created confusion and ongoing arguments. Currently, according to WHO classification, the vast majority of RAEB-T cases are best classified as acute leukemias (acute leukemias with multilineage dysplasia following myelodysplastic syndrome). A minority of cases are part of RAEB-2.","definition_xrefs":["NCIT:C27080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractory hematologic cancer","termid":"MONDO:0004111"},{"relation_name":"is_a","term_name":"myelodysplastic syndrome","termid":"MONDO:0018881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"refractory anemia with excess blasts in transformation","secondary_identifiers":["GARD:20108","Orphanet:168960","ICD9:238.73","UMLS:C0280028","SCTID:110000005","MedDRA:10038271","MEDGEN:124692","ICDO:9984/3"],"synonyms":[{"name":"RAEB-T","type":"exact"},{"name":"RAEB-t","type":"exact"}],"termid":"MONDO:0015692","xrefs":{"Monarch":{"xref_id":"0015692"}}}


id: GO:0046631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell activation","synonyms":[{"name":"alpha-beta T lymphocyte activation","type":"exact"},{"name":"alpha-beta T-cell activation","type":"exact"},{"name":"alpha-beta T-lymphocyte activation","type":"exact"}],"termid":"GO:0046631"}


id: GO:1901191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation initiation ternary complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"is_a","term_name":"regulation of formation of translation initiation ternary complex","termid":"GO:1901190"},{"relation_name":"negatively_regulates","term_name":"formation of translation initiation ternary complex","termid":"GO:0001677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003","GO:0010467"],"is_obsolete":false,"name":"negative regulation of formation of translation initiation ternary complex","synonyms":[{"name":"down regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"down regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"down-regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"down-regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"downregulation of formation of translation initiation ternary complex","type":"exact"},{"name":"downregulation of translation initiation ternary complex assembly","type":"exact"},{"name":"inhibition of formation of translation initiation ternary complex","type":"narrow"},{"name":"inhibition of translation initiation ternary complex assembly","type":"exact"},{"name":"negative regulation of translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:1901191"}


id: MONDO:1011724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency disease, non-human animal","secondary_identifiers":["OMIA:000550"],"termid":"MONDO:1011724","xrefs":{"Monarch":{"xref_id":"1011724"}}}


id: GO:0042955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dextrin, any one, or the mixture, of the intermediate polysaccharides formed during the hydrolysis of starch, which are dextrorotatory, soluble in water, and precipitable in alcohol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transport","termid":"GO:0015774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"dextrin transport","termid":"GO:0042955"}


id: GO:0021987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pallium development","termid":"GO:0021543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex development","synonyms":[{"name":"corticogenesis","type":"narrow"},{"name":"neocortex development","type":"related"}],"termid":"GO:0021987"}


id: GO:0031464
data:
  {"annotated_genes":["SJAG_04540"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70387],"is_not":false,"summary":null,"term":"GO:0031464"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul4A subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an adaptor protein.","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cul4-RING E3 ubiquitin ligase complex","termid":"GO:0080008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul4A-RING E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"CDL4 complex","type":"exact"},{"name":"CRL4 complex","type":"exact"},{"name":"DCX complex","type":"exact"},{"name":"SCF4 complex","type":"related"},{"name":"VDC complex","type":"narrow"},{"name":"cullin-RING ligase 4A","type":"exact"}],"termid":"GO:0031464","terms_by_termid":{"GO:0031464":null}}


id: PBO:0075668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 3","termid":"PBO:0075668"}


id: MONDO:0044203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Underdevelopment of the fovea centralis.","definition_xrefs":["HP:0007750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foveal hypoplasia","secondary_identifiers":["MEDGEN:393047","UMLS:C2673946","OMIMPS:136520"],"synonyms":[{"name":"FVH","type":"related"}],"termid":"MONDO:0044203","xrefs":{"Monarch":{"xref_id":"0044203"}}}


id: GO:0140302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interactions (or cell to cell communication) that occur between the male gametophyte (pollen/pollen tube) and the stylar tissues of the female sporophyte.","definition_xrefs":["PMID:27899537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen-style interaction","termid":"GO:0140302"}


id: PBO:0039237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-aminolevulinate synthase 2","termid":"PBO:0039237"}


id: GO:0048788
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The specialized cytoskeletal matrix of the presynaptic active zone. It has specialized functions in organizing synaptic events such as immobilisation or translocation of synaptic vesicles, and assembling active zone components. It is believed to form a molecular scaffold that organizes neurotransmitter release sites.","definition_xrefs":["GOC:dl","GOC:jid","NIF_Subcellular:sao1470121605","GOC:ef","PMID:10944438","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton","termid":"GO:0030863"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"},{"relation_name":"part_of","term_name":"presynaptic active zone cytoplasmic component","termid":"GO:0098831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"cytoskeleton of presynaptic active zone","synonyms":[{"name":"CAZ","type":"narrow"},{"name":"T-bar","type":"narrow"},{"name":"T-bar ribbon","type":"narrow"},{"name":"active zone cytomatrix","type":"exact"},{"name":"pre-synaptic cytoskeletal matrix assembled at active zones","type":"exact"},{"name":"pre-synaptic dense body","type":"narrow"},{"name":"pre-synaptic ribbon","type":"related"},{"name":"presynaptic cytomatrix assembled at active zones","type":"exact"},{"name":"presynaptic cytoskeletal matrix","type":"exact"},{"name":"presynaptic cytoskeletal matrix assembled at active zones","type":"exact"},{"name":"presynaptic dense body","type":"narrow"},{"name":"presynaptic ribbon","type":"related"},{"name":"ribbon","type":"related"},{"name":"synaptic ribbon","type":"narrow"}],"termid":"GO:0048788"}


id: GO:1990699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a hydrolase reaction that removes a palmitoleyl moiety, a 16-carbon monounsaturated fatty acid (C16:1), from some substrate.","definition_xrefs":["PMID:25731175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"palmitoleyl hydrolase activity","termid":"GO:1990699"}


id: PR:O42634
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein DMC1/LIM15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein dmc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.03c","secondary_identifiers":["UniProtKB:O42634"],"synonyms":[{"name":"Spom972h-DMC1","type":"exact"}],"termid":"PR:O42634"}


id: PBO:0059635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 1","termid":"PBO:0059635"}


id: PBO:0041797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 6","termid":"PBO:0041797"}


id: MONDO:0009688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myasthenia gravis (MG) is a rare, clinically heterogeneous, autoimmune disorder of the neuromuscular junction characterized by fatigable weakness of voluntary muscles.","definition_xrefs":["Orphanet:589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of peripheral nervous system","termid":"MONDO:0000590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"myasthenia gravis","secondary_identifiers":["NCIT:C60989","UMLS:C0026896","GARD:7122","MedDRA:10028417","NANDO:2200906","EFO:0004991","DOID:437","NANDO:2100252","NORD:1478","OMIM:254200","SCTID:91637004","MESH:D009157","ICD9:358.00","icd11.foundation:1270100227","ICD10CM:G70.0","NANDO:1200020","ICD9:358.0","MEDGEN:7764"],"synonyms":[{"name":"MG","type":"related"},{"name":"acquired myasthenia","type":"exact"},{"name":"autoimmune myasthenia gravis","type":"exact"},{"name":"myasthenia gravis","type":"exact"}],"termid":"MONDO:0009688","xrefs":{"Monarch":{"xref_id":"0009688"}}}


id: PBO:0070789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 19","termid":"PBO:0070789"}


id: MONDO:0016430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumefactive multiple sclerosis is characterized by a tumor-like lesion larger than two centimeters and signs and symptoms similar to those of a brain tumor. It is a rare form of multiple sclerosis (MS). Symptoms of tumefactive MS often differ from other MS cases and may include, headaches, changes in thinking, confusion, speech problems, seizures, and weakness. The cause of tumefactive MS is not known. It often develops into the relapsing-remitting form of MS. In other cases there is only one occurrence of the condition. In still others the disease process remains less clear. While there is no cure for tumefactive MS, treatments such as corticosteroids are available to decrease disease activity.","definition_xrefs":["GARD:0005885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Balo concentric sclerosis","secondary_identifiers":["ICD9:341.1","DOID:0060215","SCTID:20415001","MEDGEN:498","GARD:5885","NANDO:1200028","NCIT:C35257","MedDRA:10010252","NORD:835","SCTID:230380005","SCTID:49692006","UMLS:C0004712","Orphanet:228165"],"synonyms":[{"name":"Balo Disease","type":"exact"},{"name":"Balo concentric sclerosis","type":"exact"},{"name":"Balo disease","type":"related"},{"name":"Balo's concentric sclerosis","type":"exact"},{"name":"Balo's disease","type":"related"},{"name":"Baló concentric sclerosis","type":"related"},{"name":"Marburg variant","type":"related"},{"name":"Tumefactive multiple sclerosis","type":"related"},{"name":"concentric demyelination","type":"exact"},{"name":"diffuse cerebral sclerosis of Schilder","type":"related"},{"name":"encephalitis periaxialis concentrica","type":"related"}],"termid":"MONDO:0016430","xrefs":{"Monarch":{"xref_id":"0016430"}}}


id: MONDO:0005832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lymphatic vessels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphangitis","secondary_identifiers":["ICD10CM:I89.1","SCTID:1415005","DOID:9317","MEDGEN:7412","icd11.foundation:1548743622","MESH:D008205","UMLS:C0024225","NCIT:C34790","ICD9:457.2","EFO:0007351"],"synonyms":[{"name":"inflammation of lymphatic vessel","type":"exact"},{"name":"lymphatic vessel inflammation","type":"exact"}],"termid":"MONDO:0005832","xrefs":{"Monarch":{"xref_id":"0005832"}}}


id: GO:0047952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + NAD(P)+ = glycerone phosphate + NAD(P)H + H+.","definition_xrefs":["PMID:28326","EC:1.1.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase [NAD(P)+] activity","secondary_identifiers":["GO:0004367","GO:0106257","MetaCyc:GLYC3PDEHYDROGBIOSYN-RXN","Reactome:R-HSA-75889","GO:0036439"],"synonyms":[{"name":"L-alpha-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-alpha-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerol-3-phosphate:NAD(P) oxidoreductase activity","type":"related"},{"name":"L-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"glycerol phosphate dehydrogenase (nicotinamide adenine dinucleotide (phosphate)) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase (NAD(P)+) activity","type":"exact"},{"name":"hydroglycerophosphate dehydrogenase activity","type":"broad"},{"name":"sn-glycerol-3-phosphate:NAD(P)+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047952"}


id: PBO:0082239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-SNAP cochaperone; SNARE-complex adaptor for Sec18 (NSF) during the disassembly of postfusion cis-SNARE complexes; stimulates the ATPase activity of Sec18p; peripheral membrane protein required for vesicular transport between ER and Golgi, the 'priming' step in homotypic vacuole fusion, and autophagy; similar to mammalian alpha-SNAP","termid":"PBO:0082239"}


id: PBO:0075536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E16","termid":"PBO:0075536"}


id: MONDO:0001965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior scleritis","termid":"MONDO:0001804"},{"relation_name":"is_a","term_name":"deep keratitis","termid":"MONDO:0004903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"sclerosing keratitis","secondary_identifiers":["UMLS:C0155090","ICD9:370.54","icd11.foundation:219361296","MEDGEN:509781","DOID:14444","SCTID:27886001"],"synonyms":[{"name":"sclerokeratitis","type":"exact"}],"termid":"MONDO:0001965","xrefs":{"Monarch":{"xref_id":"0001965"}}}


id: PBO:0071089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 91","termid":"PBO:0071089"}


id: FYPO:0003916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000294","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nonsense-mediated decay","synonyms":[{"name":"abnormal NMD","type":"exact"},{"name":"abnormal nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"abnormal nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"abnormal nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"FYPO:0003916"}


id: GO:2000694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phragmoplast microtubule organization.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"phragmoplast microtubule organization","termid":"GO:0080175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"regulation of phragmoplast microtubule organization","synonyms":[{"name":"regulation of phragmoplast microtubule cytoskeleton organization","type":"exact"},{"name":"regulation of phragmoplast microtubule organisation","type":"exact"}],"termid":"GO:2000694"}


id: GO:0008980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + propanoate = ADP + propanoyl phosphate.","definition_xrefs":["EC:2.7.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"propionate kinase activity","secondary_identifiers":["RHEA:23148"],"synonyms":[{"name":"ATP:propanoate phosphotransferase activity","type":"exact"},{"name":"PduW","type":"related"},{"name":"TdcD","type":"related"},{"name":"propanoate kinase activity","type":"exact"}],"termid":"GO:0008980"}


id: SO:0000881
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an mRNA sequence that has been reprogrammed at translation, causing localized alterations.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded","termid":"SO:0000881"}


id: GO:1905615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GO_REF:0000058","PMID:11606552","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"positively_regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of developmental vegetative growth","synonyms":[{"name":"activation of developmental vegetative growth","type":"narrow"},{"name":"up regulation of developmental vegetative growth","type":"exact"},{"name":"up-regulation of developmental vegetative growth","type":"exact"},{"name":"upregulation of developmental vegetative growth","type":"exact"}],"termid":"GO:1905615"}


id: PBO:0082436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Broad-specificity lysophospholipid acyltransferase; part of MBOAT family of membrane-bound O-acyltransferases; key component of Lands cycle; may have role in fatty acid exchange at sn-2 position of mature glycerophospholipids","termid":"PBO:0082436"}


id: PBO:0027904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_mitosis","termid":"PBO:0027904"}


id: GO:0070061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the D- or L-enantiomer of fructose, the ketohexose arabino-hex-2-ulose.","definition_xrefs":["CHEBI:28757","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fructose binding","termid":"GO:0070061"}


id: PBO:0084456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase; involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER); essential for viability; human homolog ALG1 complements yeast null mutant","termid":"PBO:0084456"}


id: PBO:0071840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 35","termid":"PBO:0071840"}


id: FYPO:0001132
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119718],"is_not":false,"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_01050"],"name":"abolished protein localization to heterochromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abolished protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to heterochromatin during mitotic cell cycle","type":"related"},{"name":"protein localization to heterochromatin abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001132","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: GO:1990604
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex of the endoplasmic reticulum membrane that consists of IRE1 (Inositol-requiring enzyme-1), TRAF2 (TNF receptor-associated factor 2) and ASK1 (Apoptosis signal-regulating kinase 1, a MAP3K).","definition_xrefs":["GOC:PARL","PMID:23000344","PMID:12050113","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005789","GO:0005575","GO:0032991","GO:0005783"],"is_obsolete":false,"name":"IRE1-TRAF2-ASK1 complex","synonyms":[{"name":"ERN1-TRAF2-ASK1 complex","type":"related"}],"termid":"GO:1990604"}


id: PR:Q10432
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ccq1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil quantitatively-enriched protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.07","synonyms":[{"name":"SMC protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ccq1","type":"exact"},{"name":"structural maintenance of chromosomes protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10432"}


id: PBO:0086861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative SCF ubiquitin ligase F-box protein; interacts physically with both Cdc53p and Skp1 and genetically with CDC34; similar to putative F-box protein YDR131C","termid":"PBO:0086861"}


id: MONDO:0007965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial melanoma","termid":"MONDO:0018961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, malignant familial intraocular","secondary_identifiers":["GARD:18576","UMLS:C1835043","OMIM:155700","MESH:C563596","MEDGEN:322559"],"synonyms":[{"name":"melanoma, malignant familial intraocular","type":"exact"}],"termid":"MONDO:0007965","xrefs":{"Monarch":{"xref_id":"0007965"}}}


id: PBO:0082199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoin permease; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0082199"}


id: PBO:0039207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B10 pseudogene 1","termid":"PBO:0039207"}


id: PBO:0068950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 194, pseudogene","termid":"PBO:0068950"}


id: FYPO:0002489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a spore lyses, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable spore","termid":"FYPO:0002151"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"},{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"spore lysis","synonyms":[{"name":"inviable, lysed spore","type":"exact"},{"name":"spore cytolysis","type":"exact"}],"termid":"FYPO:0002489"}


id: GO:1901247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lung ciliated cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lung ciliated cell differentiation","termid":"GO:1901246"},{"relation_name":"negatively_regulates","term_name":"lung ciliated cell differentiation","termid":"GO:0061141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung ciliated cell differentiation","synonyms":[{"name":"down regulation of lung ciliated cell differentiation","type":"exact"},{"name":"down-regulation of lung ciliated cell differentiation","type":"exact"},{"name":"downregulation of lung ciliated cell differentiation","type":"exact"},{"name":"inhibition of lung ciliated cell differentiation","type":"narrow"}],"termid":"GO:1901247"}


id: PBO:0074955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-6","termid":"PBO:0074955"}


id: GO:0140879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of conidiogenone , a diterpene known to induce the conidiation.","definition_xrefs":["PMID:30343633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"conidiogenone biosynthetic process","synonyms":[{"name":"conidiogenone anabolism","type":"exact"},{"name":"conidiogenone biosynthesis","type":"exact"},{"name":"conidiogenone formation","type":"exact"},{"name":"conidiogenone synthesis","type":"exact"}],"termid":"GO:0140879"}


id: PR:000027533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q09838-1, MOD:00696.","definition_xrefs":["PomBase:MAH","PMID:12637524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prz1/PhosRes+","pombase_gene_id":"SPAC4G8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: transcriptional regulator prz1 isoform 1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-prz1/iso:1/Phos:1","type":"exact"},{"name":"prz1/PhosRes+","type":"exact"}],"termid":"PR:000027533"}


id: FYPO:0009030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amitrole than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to amitrole","synonyms":[{"name":"resistance to amitrole during mitotic cell cycle","type":"related"},{"name":"resistance to amitrole during vegetative growth","type":"exact"},{"name":"resistant to amitrole","type":"exact"}],"termid":"FYPO:0009030"}


id: PBO:0001467
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomeric","termid":"PBO:0001467"}


id: MONDO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast lower-inner quadrant cancer","secondary_identifiers":["ICD9:174.3","SCTID:188153009","ICD10CM:C50.3","UMLS:C0153551","MEDGEN:509325","DOID:1649"],"synonyms":[{"name":"malignant neoplasm of lower-inner quadrant of female breast","type":"exact"}],"termid":"MONDO:0002068","xrefs":{"Monarch":{"xref_id":"0002068"}}}


id: PBO:0078172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-3","termid":"PBO:0078172"}


id: PR:O14275
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.06c","synonyms":[{"name":"Spom972h-ppr4","type":"exact"}],"termid":"PR:O14275"}


id: GO:0034424
data:
  {"annotated_genes":["SJAG_03511","SJAG_07012"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75583,99187],"is_not":false,"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"A membrane-associated protein complex that is required for a late stage of endosomal transport. In budding yeast, this complex consists of Vps55p and Vps68p proteins.","definition_xrefs":["PMID:18216282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03511":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005768","GO:0032991","GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"Vps55/Vps68 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034424","terms_by_termid":{"GO:0034424":null}}


id: GO:1902855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of non-motile cilium assembly.","definition_xrefs":["GO_REF:0000058","GOC:cilia","GOC:TermGenie","PMID:23807208","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"regulates","term_name":"non-motile cilium assembly","termid":"GO:1905515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of non-motile cilium assembly","synonyms":[{"name":"regulation of immotile primary cilium assembly","type":"related"},{"name":"regulation of nonmotile primary cilia assembly","type":"related"},{"name":"regulation of nonmotile primary cilium assembly","type":"related"},{"name":"regulation of sensory cilium assembly","type":"related"},{"name":"regulation of sensory cilium biogenesis","type":"related"}],"termid":"GO:1902855"}


id: PBO:0083124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichyl-phosphoglucose-dependent alpha-1,2-glucosyltransferase; located in the ER; functions in pathway that synthesizes the dolichol-linked oligosaccharide precursor for N-linked protein glycosylation; has a role in regulation of ITR1 and INO1; human homolog ALG10B can complement yeast die2 null mutant","termid":"PBO:0083124"}


id: GO:0000329
data:
  {"annotated_genes":["SJAG_03355","SJAG_01941","SJAG_03511","SJAG_02603","SJAG_01990","SJAG_04502","SJAG_02853","SJAG_04616","SJAG_04975","SJAG_01817","SJAG_02289","SJAG_01509","SJAG_01505","SJAG_03089","SJAG_01320","SJAG_01400","SJAG_04698","SJAG_03250","SJAG_00457","SJAG_00638","SJAG_01913","SJAG_04725","SJAG_01027","SJAG_02902","SJAG_00821","SJAG_03442","SJAG_02231","SJAG_03447","SJAG_01145","SJAG_01619","SJAG_05210","SJAG_00877","SJAG_03497","SJAG_04966","SJAG_04963","SJAG_01112","SJAG_03406","SJAG_01571","SJAG_03848","SJAG_01032","SJAG_00209","SJAG_02656","SJAG_03009","SJAG_02716","SJAG_05184","SJAG_02023","SJAG_00029","SJAG_03667","SJAG_02356","SJAG_03072","SJAG_01471","SJAG_00051","SJAG_00732","SJAG_02433","SJAG_01080","SJAG_07012","SJAG_00299","SJAG_05294","SJAG_04506","SJAG_04955","SJAG_03928","SJAG_02117","SJAG_00516","SJAG_01783","SJAG_02578","SJAG_03371","SJAG_01236","SJAG_03899","SJAG_00570","SJAG_03450","SJAG_01036","SJAG_02344","SJAG_02565","SJAG_02029","SJAG_03256","SJAG_02414","SJAG_04910","SJAG_03725","SJAG_03403","SJAG_01299","SJAG_02699","SJAG_03987","SJAG_01078","SJAG_04867","SJAG_04015","SJAG_03400","SJAG_03100","SJAG_03656","SJAG_03138","SJAG_01319","SJAG_01344","SJAG_01983","SJAG_02665","SJAG_00824","SJAG_01795","SJAG_02782","SJAG_01991","SJAG_03137","SJAG_00688","SJAG_00534","SJAG_03909","SJAG_04643","SJAG_00771","SJAG_02103","SJAG_01324","SJAG_04232","SJAG_03895","SJAG_04471","SJAG_03960","SJAG_01803","SJAG_00212"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63282,69859,70521,70737,70892,71094,71339,72283,72509,72865,72920,73125,73226,73314,73341,73780,74340,74777,75207,75582,76600,76778,78778,78928,79443,79935,80053,80125,80386,80579,80648,88046,88336,88354,89388,89409,89457,89470,90718,91821,92372,93218,93302,93855,94033,94089,94090,94216,94351,94375,94914,94946,95971,96086,96219,96302,96344,96418,96456,96735,97674,97944,98364,98872,99017,99144,99184,99893,100265,100298,100551,101946,102287,103328,103904,104110,104224,105225,105296,105454,106038,106998,107005,107468,107512,107714,108164,108598,109003,109613,109697,110194,110585,110722,112115,113564,113748,113885,114663,114670,115205,116523,116876,116948,117350,117583,117709,117877,117936,118136,118533],"is_not":false,"summary":null,"term":"GO:0000329"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vacuole, the shape of which correlates with cell cycle phase. The membrane separates its contents from the cytoplasm of the cell. An example of this structure is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:krc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole membrane","termid":"GO:0098852"},{"relation_name":"part_of","term_name":"fungal-type vacuole","termid":"GO:0000324"}],"gene_count":111,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00051":null,"SJAG_00209":null,"SJAG_00212":null,"SJAG_00299":null,"SJAG_00457":null,"SJAG_00516":null,"SJAG_00534":null,"SJAG_00570":null,"SJAG_00638":null,"SJAG_00688":null,"SJAG_00732":null,"SJAG_00771":null,"SJAG_00821":null,"SJAG_00824":null,"SJAG_00877":null,"SJAG_01027":null,"SJAG_01032":null,"SJAG_01036":null,"SJAG_01078":null,"SJAG_01080":null,"SJAG_01112":null,"SJAG_01145":null,"SJAG_01236":null,"SJAG_01299":null,"SJAG_01319":null,"SJAG_01320":null,"SJAG_01324":null,"SJAG_01344":null,"SJAG_01400":null,"SJAG_01471":null,"SJAG_01505":null,"SJAG_01509":null,"SJAG_01571":null,"SJAG_01619":null,"SJAG_01783":null,"SJAG_01795":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_01941":null,"SJAG_01983":null,"SJAG_01990":null,"SJAG_01991":null,"SJAG_02023":null,"SJAG_02029":null,"SJAG_02103":null,"SJAG_02117":null,"SJAG_02231":null,"SJAG_02289":null,"SJAG_02344":null,"SJAG_02356":null,"SJAG_02414":null,"SJAG_02433":null,"SJAG_02565":null,"SJAG_02578":null,"SJAG_02603":null,"SJAG_02656":null,"SJAG_02665":null,"SJAG_02699":null,"SJAG_02716":null,"SJAG_02782":null,"SJAG_02853":null,"SJAG_02902":null,"SJAG_03009":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03100":null,"SJAG_03137":null,"SJAG_03138":null,"SJAG_03250":null,"SJAG_03256":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03400":null,"SJAG_03403":null,"SJAG_03406":null,"SJAG_03442":null,"SJAG_03447":null,"SJAG_03450":null,"SJAG_03497":null,"SJAG_03511":null,"SJAG_03656":null,"SJAG_03667":null,"SJAG_03725":null,"SJAG_03848":null,"SJAG_03895":null,"SJAG_03899":null,"SJAG_03909":null,"SJAG_03928":null,"SJAG_03960":null,"SJAG_03987":null,"SJAG_04015":null,"SJAG_04232":null,"SJAG_04471":null,"SJAG_04502":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04643":null,"SJAG_04698":null,"SJAG_04725":null,"SJAG_04867":null,"SJAG_04910":null,"SJAG_04955":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04975":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_05294":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"fungal-type vacuole membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"fungal-type vacuolar membrane","type":"related"},{"name":"membrane of vacuole with cell cycle-correlated morphology","type":"exact"}],"termid":"GO:0000329","terms_by_termid":{"GO:0000329":null}}


id: SO:0000691
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The initiator methionine that has been cleaved from a mature polypeptide sequence.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cleaved_initiator_methionine","secondary_identifiers":["BS:00067"],"synonyms":[{"name":"cleaved initiator methionine","type":"exact"},{"name":"init_met","type":"related"},{"name":"initiator methionine","type":"related"}],"termid":"SO:0000691"}


id: GO:0008661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + H+ + pyruvate = 1-deoxy-D-xylulose 5-phosphate + CO2.","definition_xrefs":["EC:2.2.1.7","RHEA:12605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016744"}],"interesting_parent_ids":["GO:0003824","GO:0016744","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"1-deoxy-D-xylulose-5-phosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R05636","MetaCyc:DXS-RXN"],"synonyms":[{"name":"1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating) activity","type":"exact"},{"name":"1-deoxyxylulose-5-phosphate synthase activity","type":"exact"},{"name":"DOXP synthase activity","type":"exact"},{"name":"DXP-synthase activity","type":"exact"},{"name":"pyruvate:D-glyceraldehyde-3-phosphate acetaldehydetransferase (decarboxylating)","type":"related"}],"termid":"GO:0008661"}


id: PATO:0002395
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned away from the axis of an organism.","definition_xrefs":["PATOC:EH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalized abaxially","termid":"PATO:0002395"}


id: PBO:0018220
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression","termid":"PBO:0018220"}


id: PBO:0045019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 2A","termid":"PBO:0045019"}


id: PBO:0054177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1550","termid":"PBO:0054177"}


id: GO:0033816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2,4-diaminobutyrate + acetyl-CoA = N(4)-acetyl-L-2,4-diaminobutyrate + CoA + H+.","definition_xrefs":["EC:2.3.1.178","RHEA:16901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"diaminobutyrate acetyltransferase activity","secondary_identifiers":["MetaCyc:R102-RXN","KEGG_REACTION:R06978"],"synonyms":[{"name":"2,4-diaminobutanoate acetyltransferase activity","type":"related"},{"name":"DAB acetyltransferase activity","type":"related"},{"name":"DABA acetyltransferase activity","type":"related"},{"name":"DABAcT","type":"related"},{"name":"EctA","type":"related"},{"name":"L-2,4-diaminobutanoate acetyltransferase activity","type":"related"},{"name":"L-2,4-diaminobutyrate acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-2,4-diaminobutanoate 4-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-2,4-diaminobutanoate N4-acetyltransferase activity","type":"related"},{"name":"diaminobutyric acid acetyltransferase activity","type":"related"}],"termid":"GO:0033816"}


id: SO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding pyrrolysyl tRNA (SO:0000766).","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolysine_tRNA_primary_transcript","synonyms":[{"name":"pyrrolysine tRNA primary transcript","type":"exact"}],"termid":"SO:0001178"}


id: PBO:0070528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 27","termid":"PBO:0070528"}


id: GO:1904405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formaldehyde stimulus.","definition_xrefs":["GOC:TermGenie","PMID:9149109","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"response to formaldehyde","termid":"GO:1904404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to formaldehyde","termid":"GO:1904405"}


id: PBO:0067589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 750, pseudogene","termid":"PBO:0067589"}


id: GO:0052094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a haustorium, a projection from a symbiotic cell or tissue that penetrates the host's tissues for the purpose of obtaining nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of haustorium for nutrient acquisition","synonyms":[{"name":"formation by organism of haustoria for nutrient acquisition from host","type":"exact"},{"name":"formation by organism of haustorium for nutrient acquisition from host","type":"exact"},{"name":"formation by symbiont of haustorium for nutrient acquisition from host","type":"related"}],"termid":"GO:0052094"}


id: MONDO:0958258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ACTH-independent Cushing syndrome","termid":"MONDO:0020529"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cushing syndrome due to cortisol-producing adrenocortical adenoma","secondary_identifiers":["UMLS:C5816799","Orphanet:642788","MEDGEN:1853161"],"termid":"MONDO:0958258","xrefs":{"Monarch":{"xref_id":"0958258"}}}


id: PBO:0064488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A","termid":"PBO:0064488"}


id: GO:1901168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-chlorocatechol.","definition_xrefs":["GOC:yaf","UniPathway:UPA00083","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"3-chlorocatechol metabolic process","termid":"GO:1901167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"3-chlorocatechol catabolic process","synonyms":[{"name":"3-chlorocatechol breakdown","type":"exact"},{"name":"3-chlorocatechol catabolism","type":"exact"},{"name":"3-chlorocatechol degradation","type":"exact"}],"termid":"GO:1901168"}


id: PR:Q10319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A YEATS domain-containing protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein AF-9 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.07","secondary_identifiers":["UniProtKB:Q10319"],"synonyms":[{"name":"Spom972h-YEATS4","type":"exact"}],"termid":"PR:Q10319"}


id: PBO:0086613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein co-localizes with clathrin-coated vesicles; YHL017W has a paralog, PTM1, that arose from the whole genome duplication","termid":"PBO:0086613"}


id: GO:0046339
data:
  {"annotated_genes":["SJAG_03162","SJAG_03609"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112393,114514],"is_not":false,"summary":null,"term":"GO:0046339"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diacylglycerol, a glyceride in which any two of the R groups (positions not specified) are acyl groups while the remaining R group can be either H or an alkyl group.","definition_xrefs":["PMID:11481335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03162":null,"SJAG_03609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"diacylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diacylglycerol metabolism","type":"exact"},{"name":"diglyceride metabolism","type":"exact"}],"termid":"GO:0046339","terms_by_termid":{"GO:0046339":null}}


id: MONDO:0007183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azotemia, familial","secondary_identifiers":["MEDGEN:400033","OMIM:109160","UMLS:C1862358","MESH:C566233"],"synonyms":[{"name":"azotemia, familial","type":"exact"}],"termid":"MONDO:0007183","xrefs":{"Monarch":{"xref_id":"0007183"}}}


id: PBO:0080378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS9D1 antisense RNA 1","termid":"PBO:0080378"}


id: PBO:0049748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HBS1 like translational GTPase","termid":"PBO:0049748"}


id: GO:0070378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the ERK5 cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"regulation of ERK5 cascade","termid":"GO:0070376"},{"relation_name":"positively_regulates","term_name":"ERK5 cascade","termid":"GO:0070375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ERK5 cascade","synonyms":[{"name":"activation of BMK cascade","type":"narrow"},{"name":"positive regulation of BMK cascade","type":"exact"},{"name":"positive regulation of BMK signaling pathway","type":"exact"},{"name":"positive regulation of BMK signalling pathway","type":"exact"},{"name":"positive regulation of BMK1 cascade","type":"exact"},{"name":"positive regulation of ERK5 signaling pathway","type":"exact"},{"name":"positive regulation of MAPK7 cascade","type":"exact"},{"name":"stimulation of BMK cascade","type":"narrow"},{"name":"up regulation of BMK cascade","type":"exact"},{"name":"up-regulation of BMK cascade","type":"exact"},{"name":"upregulation of BMK cascade","type":"exact"}],"termid":"GO:0070378"}


id: PBO:0063748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 13","termid":"PBO:0063748"}


id: PBO:0085864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has sequence and structural similarity to flavodoxins; predicted to be palmitoylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085864"}


id: PBO:0040272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonal bHLH transcription factor 1","termid":"PBO:0040272"}


id: PR:P36612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02762","PRO:DNx","PANTHER:PTHR23073:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.07c","secondary_identifiers":["UniProtKB:P36612"],"synonyms":[{"name":"Spom972h-PSMC1","type":"exact"},{"name":"protein mts2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36612"}


id: GO:0090439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: 7-hydroxylauroyl-CoA + 3 malonyl-CoA + 2 H+ = 2-(8-hydroxy-2-oxotridecyl)-6-oxopyran-4-olate + 3 CO2 + 4 coenzyme A.","definition_xrefs":["MetaCyc:RXN-16407","PMID:21193570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tetraketide alpha-pyrone synthase activity","termid":"GO:0090439"}


id: MONDO:0011776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic Infantile Neurological, Cutaneous, and Articular (CINCA) syndrome is characterized by skin rash, joint involvement, chronic meningitis with granulocytes and, in some cases, sensorineural hearing loss and ocular signs.","definition_xrefs":["Orphanet:1451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"CINCA syndrome","secondary_identifiers":["DOID:0090029","NANDO:2201066","ICD9:759.89","OMIM:607115","SCTID:239826001","MEDGEN:98370","NORD:1496","UMLS:C0409818","NANDO:1200468","GARD:1356","NCIT:C116380"],"synonyms":[{"name":"CINCA","type":"related"},{"name":"CINCA syndrome","type":"exact"},{"name":"CINCA/NOMID","type":"exact"},{"name":"Cryopyrin-associated periodic syndrome 3","type":"related"},{"name":"IOMID","type":"related"},{"name":"IOMID syndrome","type":"exact"},{"name":"NOMID","type":"exact"},{"name":"NOMID syndrome","type":"exact"},{"name":"Neonatal-Onset Multisystem Inflammatory Disease","type":"exact"},{"name":"Prieur Griscelli syndrome","type":"related"},{"name":"Prieur-Griscelli syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous and articular syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous articular syndrome","type":"exact"},{"name":"chronic neurologic cutaneous and articular syndrome","type":"exact"},{"name":"cryopyrin-associated periodic syndrome 3","type":"exact"},{"name":"infantile onset multisystem inflammatory disease","type":"related"},{"name":"infantile-onset multisystem inflammatory disease","type":"exact"},{"name":"multisystem inflammatory disease, neonatal-onset","type":"related"},{"name":"neonatal onset multisystem inflammatory disease","type":"related"},{"name":"neonatal-onset multisystem inflammatory disease","type":"exact"}],"termid":"MONDO:0011776","xrefs":{"Monarch":{"xref_id":"0011776"}}}


id: PBO:0111617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC complex subunit, cullin 4","termid":"PBO:0111617"}


id: PBO:0041311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 50","termid":"PBO:0041311"}


id: PBO:0111906
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain","termid":"PBO:0111906"}


id: PBO:0002455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cruciform cutting endonuclease Cce1","termid":"PBO:0002455"}


id: PBO:0051873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isthmin 1","termid":"PBO:0051873"}


id: MONDO:0011255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mandibulofacial dysostosis","termid":"MONDO:0015483"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mandibulofacial dysostosis-macroblepharon-macrostomia syndrome","secondary_identifiers":["MESH:C566520","GARD:17547","Orphanet:357158","OMIM:602562","UMLS:C1865181","MEDGEN:355927"],"synonyms":[{"name":"Verloes-Lesenfants syndrome","type":"related"},{"name":"macroblepharon, ectropion, hypertelorism, and macrostomia","type":"related"},{"name":"macroblepharon-ectropion-hypertelorism-macrostomia syndrome","type":"exact"},{"name":"mandibulofacial dysostosis with macroblepharon and macrostomia","type":"related"}],"termid":"MONDO:0011255","xrefs":{"Monarch":{"xref_id":"0011255"}}}


id: MONDO:0017032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary interstitial lung disease in childhood and adulthood due to alveolar structure disorder (obsolete MONDO:0017032)","secondary_identifiers":["Orphanet:264930"],"synonyms":[{"name":"primary ILD in childhood and adulthood due to alveolar structure disorder","type":"exact"}],"termid":"MONDO:0017032","xrefs":{"Monarch":{"xref_id":"0017032"}}}


id: PBO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25 (predicted)","termid":"PBO:0002413"}


id: PBO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M20 protein","termid":"PBO:0004987"}


id: MONDO:0008053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 2, autosomal dominant","secondary_identifiers":["MESH:C563541","OMIM:160700","MEDGEN:331770","UMLS:C1834531"],"synonyms":[{"name":"MYP2","type":"exact"},{"name":"myopia 2, autosomal dominant","type":"exact"}],"termid":"MONDO:0008053","xrefs":{"Monarch":{"xref_id":"0008053"}}}


id: PBO:0078031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 21","termid":"PBO:0078031"}


id: MONDO:0016994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephalic osteodysplastic primordial dwarfism (MOPD) types 1 and 3 are characterized by intrauterine and postnatal growth retardation, microcephaly, facial dysmorphism, skeletal dysplasia, low-birth weight and brain anomalies. Although MOPD types 1 and 3 were originally described as two separate entities on the basis of radiological criteria (notably small differences in pelvic and long bone structure), later reports confirmed that the two forms represent different modes of expression of the same syndrome.","definition_xrefs":["Orphanet:2636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalic osteodysplastic primordial dwarfism types I and III","secondary_identifiers":["GARD:5120","MEDGEN:1380769","SCTID:725461009","UMLS:C4319565"],"synonyms":[{"name":"MOPD 1","type":"related"},{"name":"MOPD types I and III","type":"exact"},{"name":"Taybi-Linder syndrome","type":"narrow"},{"name":"brachymelic primordial dwarfism","type":"related"},{"name":"cephaloskeletal dysplasia","type":"related"},{"name":"low-birth-weight dwarfism with skeletal dysplasia","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism type 1","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism types 1 and 3","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism, Taybi-Linder type","type":"exact"},{"name":"osteodysplastic primordial dwarfism type I","type":"related"},{"name":"primordial microcephalic dwarfism, Crachami type","type":"exact"}],"termid":"MONDO:0016994","xrefs":{"Monarch":{"xref_id":"0016994"}}}


id: PBO:0042392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member f","termid":"PBO:0042392"}


id: SO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine rich domain whereby strands associate both inter- and intramolecularly at moderately acidic pH.","definition_xrefs":["PMID:9753739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_sequence_secondary_structure","termid":"SO:0000142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"i_motif","synonyms":[{"name":"i motif","type":"exact"},{"name":"short intercalated motif","type":"exact"}],"termid":"SO:0001010"}


id: MOD:01758
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01758"}


id: GO:1900341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from formic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from formic acid","termid":"GO:1900339"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from formic acid","termid":"GO:2001127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from formic acid","synonyms":[{"name":"activation of methane biosynthetic process from formic acid","type":"narrow"},{"name":"up regulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"up-regulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"upregulation of methane biosynthetic process from formic acid","type":"exact"}],"termid":"GO:1900341"}


id: PBO:0031280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_colony_morphology","termid":"PBO:0031280"}


id: PBO:0089365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar zinc exporter, ZIP family, Zip2","termid":"PBO:0089365"}


id: GO:0005876
data:
  {"annotated_genes":["SJAG_01837","SJAG_01613","SJAG_01297","SJAG_00655","SJAG_03540","SJAG_04745","SJAG_02509","SJAG_01330","SJAG_02624","SJAG_04841","SJAG_01775","SJAG_04003","SJAG_00918","SJAG_02761","SJAG_05266","SJAG_05220","SJAG_02695","SJAG_00773","SJAG_03073","SJAG_02286","SJAG_02336","SJAG_00845","SJAG_02045","SJAG_01224","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63231,76093,76661,77375,90068,100845,104013],"is_not":false,"summary":null,"term":"GO:0005876"},{"annotations":[107529,112456,99526,107738,104326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[88069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[79224,108568,91701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[97295],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[107818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[100694,118985,101746,106641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990498"},{"annotations":[99537,98937,107819,118471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"},{"annotations":[101749,95096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005827"}]},"cv_name":"cellular_component","definition":"Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00655":null,"SJAG_00773":null,"SJAG_00845":null,"SJAG_00918":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02509":null,"SJAG_02624":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_05220":null,"SJAG_05266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"spindle microtubule","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005876","terms_by_termid":{"GO:0000235":null,"GO:0005827":null,"GO:0005876":null,"GO:0061673":null,"GO:1905721":null,"GO:1990498":null,"GO:1990537":null,"GO:1990574":null,"GO:1990941":null}}


id: PBO:0073674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein beta 3, pseudogene","termid":"PBO:0073674"}


id: PBO:0038566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABL proto-oncogene 2, non-receptor tyrosine kinase","termid":"PBO:0038566"}


id: GO:0006897
data:
  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id: PBO:0070577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 43","termid":"PBO:0070577"}


id: MONDO:1012069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dystrophic epidermolysis bullosa, non-human animal","termid":"MONDO:1011737"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic epidermolysis bullosa, domestic cat","secondary_identifiers":["OMIA:000341-9685"],"termid":"MONDO:1012069","xrefs":{"Monarch":{"xref_id":"1012069"}}}


id: PBO:0083932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in cell cycle progression; activates Cdc28p kinase to promote G1 to S phase transition; plays a role in regulating transcription of other G1 cyclins, CLN1 and CLN2; regulated by phosphorylation and proteolysis; acetyl-CoA induces CLN3 transcription in response to nutrient repletion to promote cell-cycle entry; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083932"}


id: MONDO:0010343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Asperger syndrome, susceptibility to","termid":"MONDO:0100440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asperger syndrome, X-linked, susceptibility to, 2","secondary_identifiers":["OMIM:300497"],"synonyms":[{"name":"ASPERGER syndrome, X-linked, susceptibility to, 2","type":"related"},{"name":"ASPGX2","type":"related"},{"name":"Asperger syndrome susceptibility, X-linked 2","type":"exact"},{"name":"Asperger syndrome, X-linked, susceptibility to, 2","type":"exact"},{"name":"Asperger syndrome, X-linked, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to X-linked asperger syndrome 2","type":"related"}],"termid":"MONDO:0010343","xrefs":{"Monarch":{"xref_id":"0010343"}}}


id: PBO:0038406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within,_positive_effect","termid":"PBO:0038406"}


id: MONDO:0012794
data:
  {"annotated_genes":["SJAG_02829"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86647],"is_not":false,"summary":null,"term":"MONDO:0012794"}]},"cv_name":"mondo","definition":"ANE syndrome is a rare, genetic, neuro-endocrino-cutaneous disorder characterized by highly variable degrees of alopecia, moderate to severe intellectual disability, progressive, late-onset motor deterioration and combined anterior pituitary hormone deficiency, manifesting with central hypogonadotropic hypogonadism, delayed or absent puberty, growth hormone deficiency (resulting in short stature), progressive central adrenal insufficiency and a hypoplastic anterior pituitary gland. Additional features include hypodontia, flexural reticulate hyperpigmentation, gynecomastia, microcephaly and kyphoscoliosis.","definition_xrefs":["Orphanet:157954"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02829":null},"genotype_count":0,"is_obsolete":false,"name":"ANE syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2677535","GARD:16987","MESH:C567425","OMIM:612079","DOID:0112244","MEDGEN:394313"],"synonyms":[{"name":"ANE syndrome","type":"exact"},{"name":"alopecia, neurologic defects, and endocrinopathy syndrome","type":"related"},{"name":"alopecia-progressive neurological defect-endocrinopathy syndrome","type":"exact"},{"name":"anes","type":"related"}],"termid":"MONDO:0012794","terms_by_termid":{"MONDO:0012794":null},"xrefs":{"Monarch":{"xref_id":"0012794"}}}


id: PBO:0055044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2459","termid":"PBO:0055044"}


id: MONDO:0100285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of infants in which there is progressive obliteration or discontinuity of the extrahepatic biliary system, resulting in obstruction of bile flow.","definition_xrefs":["OMIM:210500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary atresia","termid":"MONDO:0008867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic biliary atresia","secondary_identifiers":["icd11.foundation:1813934523","NCIT:C97069","GARD:886","UMLS:C4520983","MEDGEN:1621383"],"synonyms":[{"name":"EHBA","type":"exact"},{"name":"biliary atresia, extrahepatic","type":"exact"}],"termid":"MONDO:0100285","xrefs":{"Monarch":{"xref_id":"0100285"}}}


id: GO:0120217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacterial type IIA topoisomerase that is unique in its function of introducing negative supercoils into DNA at the expense of ATP hydrolysis and is also capable of relaxing positive supercoils, an activity shared with topoisomerase IV. Typically, it is composed of two copies each of an A subunit (GyrA) and a B subunit (GyrB).","definition_xrefs":["Wikipedia:DNA_gyrase","GOC:krc","PMID:1657531","GOC:bhm","PMID:20675723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex","termid":"GO:0009330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA gyrase complex","synonyms":[{"name":"topoisomerase II complex","type":"exact"}],"termid":"GO:0120217"}


id: PBO:0074053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 33","termid":"PBO:0074053"}


id: PR:Q8WZJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 35 member B1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02527","PANTHER:PTHR10778:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transporter homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.11c","secondary_identifiers":["UniProtKB:Q8WZJ9"],"synonyms":[{"name":"Spom972h-SLC35B1","type":"exact"}],"termid":"PR:Q8WZJ9"}


id: MONDO:0016676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete recurrent infections-inflammatory syndrome due to zinc metabolism disorder syndrome (obsolete MONDO:0016676)","secondary_identifiers":["GARD:17213","MEDGEN:1813911","UMLS:C4760957"],"termid":"MONDO:0016676","xrefs":{"Monarch":{"xref_id":"0016676"}}}


id: GO:0006719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of juvenile hormones, the three sesquiterpenoid derivatives that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis.","definition_xrefs":["GOC:go_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"juvenile hormone catabolic process","synonyms":[{"name":"juvenile hormone breakdown","type":"exact"},{"name":"juvenile hormone catabolism","type":"exact"},{"name":"juvenile hormone degradation","type":"exact"}],"termid":"GO:0006719"}


id: GO:1900911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of olefin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olefin biosynthetic process","synonyms":[{"name":"regulation of olefin anabolism","type":"exact"},{"name":"regulation of olefin biosynthesis","type":"exact"},{"name":"regulation of olefin formation","type":"exact"},{"name":"regulation of olefin synthesis","type":"exact"}],"termid":"GO:1900911"}


id: GO:0015356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity (obsolete GO:0015356)","synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"exact"}],"termid":"GO:0015356"}


id: GO:1900448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pyrimidine nucleotide biosynthesis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900448)","termid":"GO:1900448"}


id: GO:0032083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the rate of type IV restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of type IV site-specific deoxyribonuclease activity (obsolete GO:0032083)","synonyms":[{"name":"down regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type IV restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type IV restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type IV restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032083"}


id: GO:0075063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of symbiont invasive hypha formation within host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invasive hypha growth (obsolete GO:0075063)","synonyms":[{"name":"positive regulation of symbiont invasive hypha formation in host","type":"exact"},{"name":"positive regulation of symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0075063"}


id: PBO:0059657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 23","termid":"PBO:0059657"}


id: MONDO:0010251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 50","secondary_identifiers":["MESH:C564713","MEDGEN:376278","DOID:0112029","GARD:22668","OMIM:300115","UMLS:C1848087"],"synonyms":[{"name":"MRX50","type":"exact"},{"name":"intellectual developmental disorder, X-linked 50","type":"exact"},{"name":"intellectual disability, X-linked 50","type":"exact"},{"name":"mental retardation, X-linked 50","type":"related"}],"termid":"MONDO:0010251","xrefs":{"Monarch":{"xref_id":"0010251"}}}


id: PBO:0050614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 7","termid":"PBO:0050614"}


id: PBO:0080851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 3 pseudogene 1","termid":"PBO:0080851"}


id: GO:0043801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribulose 5-phosphate + formaldehyde = D-arabino-3-hexulose 6-phosphate.","definition_xrefs":["PMID:16075199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"hexulose-6-phosphate synthase activity","secondary_identifiers":["MetaCyc:R10-RXN","EC:4.1.2.43","RHEA:25201"],"termid":"GO:0043801"}


id: GO:0047980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzoylglycine + H2O = benzoate + glycine.","definition_xrefs":["EC:3.5.1.32","RHEA:10424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"hippurate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R01424","MetaCyc:HIPPURATE-HYDROLASE-RXN"],"synonyms":[{"name":"N-benzoylamino-acid amidohydrolase activity","type":"related"},{"name":"benzoylglycine amidohydrolase activity","type":"related"},{"name":"hippuricase activity","type":"related"}],"termid":"GO:0047980"}


id: PBO:0054974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2388","termid":"PBO:0054974"}


id: MONDO:0018980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrofacial dysostosis, Kennedy-Teebi type was reported as a new type of acrofacial dysostosis due to the presence of manifestations not usually seen in Nager syndrome (NS) such as microcephaly, blepharophimosis, microtia, a peculiar beakednose, cleft lip and palate, symmetrical involvement of the thumbs and great toes and developmental delay. It has since been suggested that these features can also be a part of the NS phenotype.","definition_xrefs":["Orphanet:64542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrofacial dysostosis, Kennedy-Teebi type","secondary_identifiers":["UMLS:C4304094","MEDGEN:929763","SCTID:720427009","GARD:18859"],"synonyms":[{"name":"Kennedy-Teebi syndrome","type":"exact"}],"termid":"MONDO:0018980","xrefs":{"Monarch":{"xref_id":"0018980"}}}


id: GO:0070482
data:
  {"annotated_genes":["SJAG_01585","SJAG_03345","SJAG_00642","SJAG_04018","SJAG_00221","SJAG_01150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110175,101542,112041,117314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[116719,89584],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of oxygen.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01585":null,"SJAG_03345":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070482","terms_by_termid":{"GO:0071456":null,"GO:1900039":null}}


id: MONDO:0007335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft lip with or without cleft palate mapped to chromosome 6p24.","definition_xrefs":["NCIT:C124838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 1","secondary_identifiers":["MESH:C566121","OMIM:119530","UMLS:C1861537","DOID:0080395","MEDGEN:349303"],"synonyms":[{"name":"OFC1","type":"exact"},{"name":"cleft Lip/palate, nonsyndromic","type":"related"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 1","type":"related"},{"name":"orofacial cleft 1","type":"exact"},{"name":"orofacial cleft, nonsyndromic","type":"related"},{"name":"orofacial cleft-1","type":"exact"}],"termid":"MONDO:0007335","xrefs":{"Monarch":{"xref_id":"0007335"}}}


id: GO:0061335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of an epithelial cell dependent on cycles of endoreplication, where growth contributes to the shaping of the Malpighian tubule.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","PMID:19783135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth involved in Malpighian tubule morphogenesis","termid":"GO:0061335"}


id: GO:0016160
data:
  {"annotated_genes":["SJAG_00485","SJAG_00096","SJAG_02435","SJAG_01029","SJAG_04789","SJAG_04238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66895,67704,61389,59715,60248,63895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004556"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of amylose or an amylose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00485":null,"SJAG_01029":null,"SJAG_02435":null,"SJAG_04238":null,"SJAG_04789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"amylase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null},"termid":"GO:0016160","terms_by_termid":{"GO:0004556":null}}


id: GO:0015306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sialate(out) + cation(out) = sialate(in) + cation(in).","definition_xrefs":["TC:2.A.1.14.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sialate:monoatomic cation symporter activity","synonyms":[{"name":"cation/sialate symporter activity","type":"exact"},{"name":"cation:sialate symporter activity","type":"exact"},{"name":"sialate transporter activity","type":"broad"},{"name":"sialate/cation symporter activity","type":"exact"},{"name":"sialate:cation symporter activity","type":"broad"}],"termid":"GO:0015306"}


id: PBO:0058136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4435-2","termid":"PBO:0058136"}


id: PBO:0072085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 15","termid":"PBO:0072085"}


id: FYPO:0001817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which phosphoribosylamine-glycine ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphoribosylamine-glycine ligase activity","termid":"FYPO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished phosphoribosylamine-glycine ligase activity","synonyms":[{"name":"abolished GAR synthetase activity","type":"exact"},{"name":"phosphoribosylamine-glycine ligase activity abolished","type":"exact"}],"termid":"FYPO:0001817"}


id: GO:0062055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A regulation of the phtosynthetic light reaction in which the light harvesting antenna complexes transition between photosystems.","definition_xrefs":["PMID:29967049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthetic state transition","termid":"GO:0062055"}


id: PBO:0031630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spore_germination_frequency","termid":"PBO:0031630"}


id: MONDO:0100077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital alveolar dysplasia characterized anatomically by a defective and hypoplastic development of pulmonary alveoli that is commonly associated with atelectasis and can be responsible for atelectasis.","definition_xrefs":["PMID:18874463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary veins anomaly","termid":"MONDO:0020295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital alveolar dysplasia","secondary_identifiers":["UMLS:C0035220","MEDGEN:20539"],"synonyms":[{"name":"CAD","type":"exact"}],"termid":"MONDO:0100077","xrefs":{"Monarch":{"xref_id":"0100077"}}}


id: PATO:0000250
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000250 spinal reflex (obsolete PATO:0000250)","termid":"PATO:0000250"}


id: FYPO:0004368
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id: PBO:0051008
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily DCC subclass member 3","termid":"PBO:0051008"}


id: PBO:0071504
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 7","termid":"PBO:0071504"}


id: MONDO:0003267
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myxopapillary ependymoma (obsolete MONDO:0003267)","termid":"MONDO:0003267","xrefs":{"Monarch":{"xref_id":"0003267"}}}


id: MONDO:0018044
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic hypersomnia is a sleep disorder classified in two forms: idiopathic hypersomnia with long sleep time and idiopathic hypersomnia without long sleep time.","definition_xrefs":["Orphanet:33208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersomnia","termid":"MONDO:0005466"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hypersomnia","secondary_identifiers":["MEDGEN:155626","MESH:D020177","NCIT:C116343","icd11.foundation:631826564","UMLS:C0751757","SCTID:3731000119107","GARD:8737"],"synonyms":[{"name":"idiopathic hypersomnolence","type":"related"},{"name":"primary hypersomnia","type":"exact"}],"termid":"MONDO:0018044","xrefs":{"Monarch":{"xref_id":"0018044"}}}


id: PBO:0044840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 128","termid":"PBO:0044840"}


id: PBO:0050184
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 1","termid":"PBO:0050184"}


id: GO:0006912
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete phagosome formation (obsolete GO:0006912)","synonyms":[{"name":"phagosome formation","type":"exact"}],"termid":"GO:0006912"}


id: MONDO:0003070
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection of the lymph nodes in the axilla.","definition_xrefs":["NCIT:C27333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"axillary lymphadenitis","secondary_identifiers":["DOID:4640","MEDGEN:182522","UMLS:C0919797"],"synonyms":[{"name":"axilla lymphadenitis (disease)","type":"exact"},{"name":"axillary adenitis","type":"related"},{"name":"axillary lymphadenitis","type":"exact"},{"name":"lymphadenitis (disease) of axilla","type":"exact"}],"termid":"MONDO:0003070","xrefs":{"Monarch":{"xref_id":"0003070"}}}


id: PBO:0031089
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_manganese_depletion","termid":"PBO:0031089"}


id: PBO:0059614
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 26","termid":"PBO:0059614"}


id: MONDO:0002986
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuromuscular disease (obsolete MONDO:0002986)","termid":"MONDO:0002986","xrefs":{"Monarch":{"xref_id":"0002986"}}}


id: GO:0045786
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id: GO:1904862
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id: PBO:0081132
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id: PBO:0087175
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B32; forms dissociable heterodimer with Rpb7p; Rpb4/7 dissociates from RNAPII as Ser2 CTD phosphorylation increases; Rpb4/7 regulates cellular lifespan via mRNA decay process; involved in recruitment of 3'-end processing factors to transcribing RNAPII complex, export of mRNA to cytoplasm under stress conditions; also involved in translation initiation","termid":"PBO:0087175"}


id: RO:0002353
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id: GO:0008019
data:
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id: PBO:0029484
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id: SO:0000365
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id: GO:0035420
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id: GO:0061948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The discharge, by sperm, of a single, anterior secretory granule before the sperm reaches to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents.","definition_xrefs":["PMID:19153666","PMID:26655718","PMID:21380641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"premature acrosome loss","synonyms":[{"name":"spontaneous acrosome loss","type":"exact"}],"termid":"GO:0061948"}


id: GO:0007345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Formation and development of an embryo and its organized structures.","definition_xrefs":["ISBN:0070524300","ISBN:0140512888","GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete embryogenesis and morphogenesis (obsolete GO:0007345)","synonyms":[{"name":"embryogenesis and morphogenesis","type":"exact"}],"termid":"GO:0007345"}


id: GO:1905575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GM3.","definition_xrefs":["PMID:1454804","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"ganglioside GM3 binding","termid":"GO:1905575"}


id: MONDO:0013786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the C8orf37 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"cone-rod dystrophy 16","secondary_identifiers":["DOID:0111022","OMIM:614500","MEDGEN:482675","UMLS:C3281045","GARD:15812"],"synonyms":[{"name":"C8orf37 cone-rod dystrophy","type":"exact"},{"name":"CORD16","type":"exact"},{"name":"cone-rod dystrophy 16","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in C8orf37","type":"exact"},{"name":"cone-rod dystrophy type 16","type":"exact"},{"name":"retinal dystrophy with early macular involvement","type":"exact"},{"name":"retinitis pigmentosa 64","type":"related"}],"termid":"MONDO:0013786","xrefs":{"Monarch":{"xref_id":"0013786"}}}


id: PBO:0055910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34 pseudogene 1","termid":"PBO:0055910"}


id: PBO:0047284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group I","termid":"PBO:0047284"}


id: FYPO:0001544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfur measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular sulfur level","synonyms":[{"name":"normal cellular sulfur accumulation","type":"related"},{"name":"normal cellular sulfur level during mitotic cell cycle","type":"related"},{"name":"normal cellular sulfur level during vegetative growth","type":"exact"},{"name":"normal cellular sulphur level","type":"exact"}],"termid":"FYPO:0001544"}


id: PBO:0109131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 4","termid":"PBO:0109131"}


id: GO:0015800
data:
  {"annotated_genes":["SJAG_03256","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[96881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"}]},"cv_name":"biological_process","definition":"The directed movement of acidic amino acids, amino acids with a pH below 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"acidic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015800","terms_by_termid":{"GO:0015813":null,"GO:0090515":null}}


id: MONDO:0025425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious disease caused by canine adenovirus (adenoviruses, canine) infecting the liver, the eye, the kidney, and other organs in dogs, other canids, and bears. Symptoms include fever; edema; vomiting; and diarrhea.","definition_xrefs":["MESH:D006522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dog disease","termid":"MONDO:0024919"},{"relation_name":"is_a","term_name":"hepatitis, viral, animal","termid":"MONDO:0025085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis, infectious canine","synonyms":[{"name":"Hepatitides, canine infectious","type":"related"},{"name":"Hepatitides, infectious canine","type":"related"},{"name":"Hepatitis, canine infectious","type":"related"},{"name":"canine Hepatitides, infectious","type":"related"},{"name":"canine Hepatitis, infectious","type":"related"},{"name":"canine infectious Hepatitides","type":"related"},{"name":"canine infectious Hepatitis","type":"related"},{"name":"infectious Hepatitides, canine","type":"related"},{"name":"infectious Hepatitis, canine","type":"related"},{"name":"infectious canine Hepatitides","type":"related"},{"name":"infectious canine Hepatitis","type":"related"}],"termid":"MONDO:0025425","xrefs":{"Monarch":{"xref_id":"0025425"}}}


id: MONDO:0005230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the dermis and subcutaneous tissues caused by a bacterial infection. Symptoms include erythema, edema, and pain to the affected area.","definition_xrefs":["NCIT:C26715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cellulitis","secondary_identifiers":["MESH:D002481","EFO:0003035","ICD9:682.8","HP:0100658","UMLS:C0007642","SCTID:128045006","ICD9:682.9","DOID:3488","MEDGEN:40174","Wikipedia:Cellulitis"],"synonyms":[{"name":"cellulitis","type":"exact"},{"name":"cellulitis (disease)","type":"exact"}],"termid":"MONDO:0005230","xrefs":{"Monarch":{"xref_id":"0005230"}}}


id: PBO:0052181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 13","termid":"PBO:0052181"}


id: MONDO:1012019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect and atrial fibrillation, non-human animal","termid":"MONDO:1011640"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrial septal defect and atrial fibrillation, horse","secondary_identifiers":["OMIA:000090-9796"],"termid":"MONDO:1012019","xrefs":{"Monarch":{"xref_id":"1012019"}}}


id: PR:O94569
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1773.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.12","synonyms":[{"name":"Spom972h-SPBC1773.12","type":"exact"}],"termid":"PR:O94569"}


id: MONDO:0002263
data:
  {"annotated_genes":["SJAG_03418","SJAG_02339","SJAG_03698","SJAG_04703","SJAG_04114","SJAG_02294","SJAG_04950","SJAG_03051","SJAG_02748","SJAG_01156","SJAG_04148","SJAG_00103","SJAG_01419","SJAG_03720","SJAG_02690","SJAG_00377","SJAG_02954","SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[86288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87586,85371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[87447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"},{"annotations":[87277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[87523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[86333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[85950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[86739,86740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[86035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[86436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[87331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86924,86925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"A disease involving the female reproductive system.","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_01156":null,"SJAG_01419":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02748":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"female reproductive system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:229","ICD9:629.9","MEDGEN:65928","NCIT:C27020","SCTID:310789003","UMLS:C0236100","MESH:D005831","EFO:0009549"],"synonyms":[{"name":"disease of female genital system","type":"related"},{"name":"disease of female reproductive system","type":"exact"},{"name":"disease or disorder of female reproductive system","type":"exact"},{"name":"disorder of female genital system","type":"exact"},{"name":"disorder of female genital tract","type":"related"},{"name":"disorder of female reproductive system","type":"exact"},{"name":"female reproductive disease","type":"exact"},{"name":"female reproductive system disease","type":"exact"},{"name":"female reproductive system disease or disorder","type":"exact"},{"name":"female reproductive system disorder","type":"exact"},{"name":"gynaecological disease","type":"related"},{"name":"gynecological disease","type":"related"}],"termid":"MONDO:0002263","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0011962":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0032747":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0002263"}}}


id: FYPO:0005895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during mitotic G1 phase","termid":"FYPO:0005896"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during mitotic G1 phase","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during mitotic G1 phase","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during G1 phase of mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005895"}


id: GO:0098601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-Selenomethionine + H2O => Orthophosphate + Diphosphate + Se-Adenosylselenomethionine.","definition_xrefs":["PMID:2339986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"selenomethionine adenosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408551","RHEA:31211"],"termid":"GO:0098601"}


id: PBO:0068679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 60, pseudogene","termid":"PBO:0068679"}


id: PBO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamic acid","termid":"PBO:0000554"}


id: GO:0030532
data:
  {"annotated_genes":["SJAG_02843","SJAG_01015","SJAG_05235","SJAG_00313","SJAG_03954","SJAG_00643","SJAG_03547","SJAG_04222","SJAG_03995","SJAG_04433","SJAG_01308","SJAG_03460","SJAG_00504","SJAG_01008","SJAG_04405","SJAG_04214","SJAG_04529","SJAG_03469","SJAG_04538","SJAG_04497","SJAG_02304","SJAG_04163","SJAG_04079","SJAG_01634","SJAG_01819","SJAG_03214","SJAG_03070","SJAG_02469","SJAG_02295","SJAG_00322","SJAG_03983","SJAG_03369","SJAG_01452","SJAG_05240","SJAG_02185","SJAG_00278","SJAG_04911","SJAG_02455","SJAG_00474","SJAG_00531","SJAG_01654","SJAG_01327","SJAG_03410","SJAG_00058","SJAG_01547","SJAG_01870","SJAG_00147","SJAG_01440","SJAG_04318","SJAG_03210","SJAG_01301","SJAG_00577","SJAG_03245","SJAG_05009","SJAG_00989","SJAG_00414","SJAG_02279","SJAG_04230","SJAG_05208","SJAG_00498","SJAG_00539"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79653,103029,70390,76016,77030,74466,79883,113606,73484,73050,74385,77137,77427,70808,94323,107265,112697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005685"},{"annotations":[70809,113212,73051,75716,108856,103524,115266,76200,80459,109825,77031,116195,96144,102732,74238,78066,76017,77711,110391,70746,77428,108204,73526,106670,74430,112984,79654,116728,76308,72457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005686"},{"annotations":[77032,77429,79655,73052,70810,75398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005687"},{"annotations":[73054,95505,70811,106160,76019,108857,78008,100955,71008,80364,62086,77699,111467,77663,110954,106204,63405,76575,79091,115191,79687,98334,78821,71792,110392,77912,74653,116730,78631,93441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046540"},{"annotations":[116197,110393,118157,77029,103025,106672,106873,115268,73049,96146,77426,72831,100956,76398,76015,77662,79652,108858,97720,70807,78820,113214,116731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005682"},{"annotations":[105815,71007,72101,77911,80362,79188,62085,79090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005688"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains at least one RNA of the small nuclear RNA (snRNA) class and as well as its associated proteins. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP, U4/U6 snRNP, or 7SK snRNP. Many, of these complexes become part of the spliceosome involved in splicing of nuclear mRNAs. Others are involved in regulation of transcription elongation or 3'-end processing of replication-dependent histone pre-mRNAs.","definition_xrefs":["GOC:mah","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00278":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00531":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01440":null,"SJAG_01452":null,"SJAG_01547":null,"SJAG_01634":null,"SJAG_01654":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03214":null,"SJAG_03245":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04079":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05208":null,"SJAG_05235":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"small nuclear ribonucleoprotein complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:SnRNP"],"synonyms":[{"name":"small nuclear ribonucleoprotein","type":"exact"},{"name":"snRNP","type":"exact"}],"termid":"GO:0030532","terms_by_termid":{"GO:0005682":null,"GO:0005685":null,"GO:0005686":null,"GO:0005687":null,"GO:0005688":null,"GO:0046540":null}}


id: FYPO:0006380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the vacuole is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000257","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to vacuole during nitrogen starvation","synonyms":[{"name":"normal protein localisation to vacuole during nitrogen starvation","type":"exact"},{"name":"normal protein localization to vacuole during nitrogen depletion","type":"exact"},{"name":"normal protein localization to vacuole during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006380"}


id: GO:0003994
data:
  {"annotated_genes":["SJAG_01630","SJAG_03588"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73488,74103],"is_not":false,"summary":null,"term":"GO:0003994"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: citrate = isocitrate. The reaction occurs in two steps: (1) citrate = cis-aconitate + H2O, (2) cis-aconitate + H2O = isocitrate. This reaction is the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate.","definition_xrefs":["GOC:pde","EC:4.2.1.3","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_03588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"aconitate hydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0052632","MetaCyc:RXN-14047","Reactome:R-HSA-5690911","RHEA:10336","Reactome:R-HSA-70971"],"synonyms":[{"name":"aconitase activity","type":"exact"},{"name":"cis-aconitase activity","type":"related"},{"name":"citrate hydro-lyase activity","type":"broad"},{"name":"citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"related"},{"name":"citrate(isocitrate) hydro-lyase activity","type":"related"}],"termid":"GO:0003994","terms_by_termid":{"GO:0003994":null}}


id: MONDO:0031689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic progeroid syndrome (obsolete MONDO:0031689)","secondary_identifiers":["Orphanet:363245","ICD10CM:E34.8"],"termid":"MONDO:0031689","xrefs":{"Monarch":{"xref_id":"0031689"}}}


id: PBO:0078837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-1","termid":"PBO:0078837"}


id: PR:O43003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mmf1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.04c","synonyms":[{"name":"Spom972h-mmf1","type":"exact"},{"name":"isoleucine biosynthesis and maintenance of intact mitochondria 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"maintenance of mitochondrial function 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43003"}


id: MONDO:0014965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the GLDN gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 11","secondary_identifiers":["GARD:13220","MEDGEN:934637","UMLS:C4310670","OMIM:617194"],"synonyms":[{"name":"GLDN lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS11","type":"exact"},{"name":"lethal congenital contracture arthrogryposis-11","type":"related"},{"name":"lethal congenital contracture syndrome 11","type":"exact"},{"name":"lethal congenital contracture syndrome 11; LCCS11","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in GLDN","type":"exact"},{"name":"lethal congenital contracture syndrome type 11","type":"exact"}],"termid":"MONDO:0014965","xrefs":{"Monarch":{"xref_id":"0014965"}}}


id: GO:1990298
data:
  {"annotated_genes":["SJAG_02451","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80205,114816],"is_not":false,"summary":null,"term":"GO:1990298"}]},"cv_name":"cellular_component","definition":"Protein complex that associates with the kinetochores.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_02451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"bub1-bub3 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990298","terms_by_termid":{"GO:1990298":null}}


id: PR:O14103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC31G5.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rot1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.02","synonyms":[{"name":"Spom972h-SPAC31G5.02","type":"exact"}],"termid":"PR:O14103"}


id: PBO:0071790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p25 like","termid":"PBO:0071790"}


id: PBO:0077044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor alpha","termid":"PBO:0077044"}


id: PBO:0017586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, TPR lobe subcomplex subunit Cut9/Apc6","termid":"PBO:0017586"}


id: PBO:0073504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 3","termid":"PBO:0073504"}


id: GO:0043873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin.","definition_xrefs":["PMID:6352705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pyruvate-flavodoxin oxidoreductase activity","secondary_identifiers":["RHEA:44140","MetaCyc:PYFLAVOXRE-RXN"],"synonyms":[{"name":"NifJ","type":"related"},{"name":"pyruvate:flavodoxin oxidoreductase activity","type":"exact"}],"termid":"GO:0043873"}


id: MONDO:0017280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Demodicidosis is a rare parasitic cutaneous disease due to Demodex mite infestation characterized by variable degrees of spinulosis, erythema, papules, and pustules, usually accompanied by a burning or pruritic sensation. Face (incl. eyelids) is most frequently affected, but ear canal, scalp, neck, back, chest, nipples, buttocks, penis, and extremity (legs and arms) involvement have also been observed. Dermoscopic examination reveals Demodex tails and follicular openings.","definition_xrefs":["Orphanet:283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"demodicidosis","secondary_identifiers":["GARD:1802","icd11.foundation:1473144548"],"synonyms":[{"name":"Demodex caused disease or disorder","type":"exact"},{"name":"Demodex disease or disorder","type":"exact"},{"name":"Demodex infectious disease","type":"exact"},{"name":"Demodicosis","type":"exact"},{"name":"demodectic mange","type":"exact"},{"name":"red mange","type":"exact"}],"termid":"MONDO:0017280","xrefs":{"Monarch":{"xref_id":"0017280"}}}


id: PBO:0065800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1A, member RAS oncogene family","termid":"PBO:0065800"}


id: GO:0072374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-carotene + O2 + reduced [NADPH--hemoprotein reductase] = alpha-cryptoxanthin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase]. Zeinoxanthin may also be used as the substrate, in which case lutein is produced.","definition_xrefs":["EC:1.14.14.158","PMID:8837513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carotene epsilon hydroxylase activity","termid":"GO:0072374"}


id: PBO:0051292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-13","termid":"PBO:0051292"}


id: PBO:0058906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12124","termid":"PBO:0058906"}


id: GO:1902606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:23407708"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of large conductance calcium-activated potassium channel activity (obsolete GO:1902606)","synonyms":[{"name":"regulation of BK KCa channels","type":"exact"},{"name":"regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"regulation of BK channel activity","type":"related"},{"name":"regulation of large conductance KCa channels","type":"exact"}],"termid":"GO:1902606"}


id: PBO:0053326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 115","termid":"PBO:0053326"}


id: PBO:0042424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 8","termid":"PBO:0042424"}


id: GO:0071904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein N-linked glycosylation via asparagine in which N-acetylgalactosamine is added to the N4 of asparagine, forming an (S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-galactopyranosyl)amino-4-oxobutanoic acid residue.","definition_xrefs":["GOC:pr","RESID:AA0420"],"gene_count":0,"genotype_count":0,"name":"obsolete protein N-linked N-acetylgalactosaminylation via asparagine (obsolete GO:0071904)","synonyms":[{"name":"protein amino acid N-linked N-acetylgalactosaminylation via asparagine","type":"exact"}],"termid":"GO:0071904"}


id: PBO:0053427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 370","termid":"PBO:0053427"}


id: GO:0050969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in magnetoception in which a chemical stimulus is received and converted into a molecular signal. It is believed that organisms such as birds and salamanders interpret product ratios in chemical reactions which involve transitions between different spin states.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception","termid":"GO:0050907"},{"relation_name":"part_of","term_name":"magnetoreception by sensory perception of chemical stimulus","termid":"GO:0050977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in magnetoreception","synonyms":[{"name":"magnetoception, sensory transduction of chemical stimulus","type":"exact"},{"name":"magnetoreception, detection of chemical stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of chemical stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during magnetoreception","type":"exact"},{"name":"sensory transduction of chemical stimulus during magnetoreception","type":"exact"}],"termid":"GO:0050969"}


id: PBO:0028306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitotic_S_phase","termid":"PBO:0028306"}


id: GO:0044247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of polysaccharides, polymers of many (typically more than 10) monosaccharide residues linked glycosidically, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular polysaccharide catabolic process (obsolete GO:0044247)","synonyms":[{"name":"cellular polysaccharide breakdown","type":"exact"},{"name":"cellular polysaccharide catabolism","type":"exact"},{"name":"cellular polysaccharide degradation","type":"exact"}],"termid":"GO:0044247"}


id: GO:0016342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex of peripheral cytoplasmic proteins (alpha-, beta- and gamma-catenin) that interact with the cytoplasmic region of uvomorulin/E-cadherin to connect it to the actin cytoskeleton.","definition_xrefs":["ISBN:0198599323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"extrinsic component of plasma membrane","termid":"GO:0019897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"catenin complex","termid":"GO:0016342"}


id: PBO:0085152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosomal histone H3-Lys79 methylase; methylation is required for telomeric silencing, meiotic checkpoint control, and DNA damage response; single DOT1 gene produces two Dot1p isoforms from alternative translation start sites as a result of leaky scanning by the ribosome","termid":"PBO:0085152"}


id: GO:0051553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavones, a class of pigmented plant compounds based on 2-phenyl-4H-1-benzopyran-4-one (2-phenylchromone).","definition_xrefs":["GOC:ai","PMID:18567791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavone biosynthetic process","synonyms":[{"name":"2-phenyl-4H-1-benzopyran-4-one biosynthesis","type":"narrow"},{"name":"2-phenyl-4H-1-benzopyran-4-one biosynthetic process","type":"narrow"},{"name":"2-phenylchromone biosynthesis","type":"narrow"},{"name":"2-phenylchromone biosynthetic process","type":"narrow"}],"termid":"GO:0051553"}


id: PBO:0086716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene","termid":"PBO:0086716"}


id: PBO:0110480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 7","termid":"PBO:0110480"}


id: PBO:0049143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase pseudogene 1","termid":"PBO:0049143"}


id: GO:0072682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of an eosinophil from the blood vessels into the surrounding tissue.","definition_xrefs":["GOC:mah","CL:0000771","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"eosinophil migration","termid":"GO:0072677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil extravasation","termid":"GO:0072682"}


id: PBO:0031467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0031467"}


id: PR:O94330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid acetyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.14","synonyms":[{"name":"AGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-acetylglutamate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NAGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-arg6","type":"exact"},{"name":"arginine-requiring protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamate N-acetyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94330"}


id: PBO:0042610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 10","termid":"PBO:0042610"}


id: MONDO:0002822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm characterized by the presence of a trabecular glandular architectural pattern.","definition_xrefs":["NCIT:C4068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"trabecular adenocarcinoma","secondary_identifiers":["DOID:3965","UMLS:C0302182","MEDGEN:86214","ICDO:8190/3","ICDO:8332/3"],"synonyms":[{"name":"Merkel cell carcinoma","type":"related"},{"name":"trabecula adenocarcinoma","type":"exact"},{"name":"trabecular adenocarcinoma","type":"exact"},{"name":"trabecular adenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"trabecular carcinoma","type":"exact"}],"termid":"MONDO:0002822","xrefs":{"Monarch":{"xref_id":"0002822"}}}


id: PBO:0055432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2862","termid":"PBO:0055432"}


id: PBO:0045542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 2","termid":"PBO:0045542"}


id: PBO:0017614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Fol2 (predicted)","termid":"PBO:0017614"}


id: MONDO:0002979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated squamous cell carcinoma characterized by a papillary, exophytic growth pattern and hyperkeratosis. The most commonly affected anatomic sites are the larynx, penis, cervix, vagina, and vulva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"papillary carcinoma","termid":"MONDO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary squamous carcinoma","secondary_identifiers":["UMLS:C0334244","ICDO:8052/3","DOID:4385","MEDGEN:83115","NCIT:C4102"],"synonyms":[{"name":"papillary epidermoid carcinoma","type":"exact"},{"name":"papillary epidermoid cell carcinoma","type":"exact"},{"name":"papillary squamous carcinoma","type":"exact"},{"name":"papillary squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002979","xrefs":{"Monarch":{"xref_id":"0002979"}}}


id: PBO:0108695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein","termid":"PBO:0108695"}


id: MONDO:0021299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the extrahepatic bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct carcinoma in situ","termid":"MONDO:0000374"},{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"carcinoma in situ of extrahepatic bile duct","secondary_identifiers":["NCIT:C4442","SCTID:92589000","MEDGEN:138028","UMLS:C0345914"],"synonyms":[{"name":"carcinoma in situ of extrahepatic bile duct","type":"exact"},{"name":"carcinoma in situ of extrahepatic bile ducts","type":"exact"},{"name":"carcinoma in situ of extrahepatic biliary ducts","type":"exact"},{"name":"carcinoma in situ of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct cancer stage 0","type":"exact"},{"name":"extrahepatic bile duct carcinoma in situ","type":"exact"},{"name":"extrahepatic bile duct in situ carcinoma","type":"exact"},{"name":"extrahepatic biliary duct carcinoma in situ","type":"exact"},{"name":"stage 0 carcinoma of extrahepatic bile duct","type":"exact"},{"name":"stage 0 carcinoma of the extrahepatic bile duct","type":"exact"},{"name":"stage 0 extrahepatic bile duct cancer","type":"exact"},{"name":"stage 0 extrahepatic bile duct carcinoma","type":"exact"},{"name":"stage 0 extrahepatic bile duct carcinoma in situ","type":"exact"}],"termid":"MONDO:0021299","xrefs":{"Monarch":{"xref_id":"0021299"}}}


id: MONDO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hypermature cataract formed by liquefaction of the cortex and sinking of the dense nucleus to the bottom of the capsular bag.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"hypermature cataract","termid":"MONDO:0045049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Morgagni cataract","secondary_identifiers":["UMLS:C0152258","DOID:13964","ICD9:366.18","MEDGEN:508950","SCTID:264443002"],"synonyms":[{"name":"Morgagnian cataract","type":"exact"},{"name":"hypermature cataract","type":"broad"}],"termid":"MONDO:0001848","xrefs":{"Monarch":{"xref_id":"0001848"}}}


id: PBO:0083914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forkhead transcription factor; drives S-phase activation of genes involved in chromosome segregation, spindle dynamics, budding; also activates genes involved in respiration, use of alternative energy sources, NAD synthesis, oxidative stress resistance; regulated by cell wall integrity checkpoint; key factor in early adaptation to nutrient deficiency and diauxic shift; suppressor of calmodulin mutants with specific SPB assembly defects; ortholog of C. elegans lifespan regulator PHA-4","termid":"PBO:0083914"}


id: MONDO:0017742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of O-xylosylglycan synthesis (obsolete MONDO:0017742)","secondary_identifiers":["Orphanet:309450"],"termid":"MONDO:0017742","xrefs":{"Monarch":{"xref_id":"0017742"}}}


id: PBO:0042149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 8","termid":"PBO:0042149"}


id: MONDO:0018560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anterior urethral valve (obsolete MONDO:0018560)","secondary_identifiers":["SCTID:253907008","Orphanet:435372"],"termid":"MONDO:0018560","xrefs":{"Monarch":{"xref_id":"0018560"}}}


id: MONDO:0001736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mastitis","termid":"MONDO:0006849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal infective mastitis","secondary_identifiers":["SCTID:3468005","DOID:13520","ICD10CM:P39.0","ICD9:771.5","UMLS:C0158948","MEDGEN:510679"],"termid":"MONDO:0001736","xrefs":{"Monarch":{"xref_id":"0001736"}}}


id: GO:0016242
data:
  {"annotated_genes":["SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106977],"is_not":false,"summary":null,"term":"GO:0016242"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macroautophagy.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of autophagy","termid":"GO:0010507"},{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"negatively_regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of macroautophagy","type":"exact"},{"name":"down-regulation of macroautophagy","type":"exact"},{"name":"downregulation of macroautophagy","type":"exact"},{"name":"inhibition of macroautophagy","type":"narrow"},{"name":"negative regulation of starvation-induced autophagy","type":"exact"}],"termid":"GO:0016242","terms_by_termid":{"GO:0016242":null}}


id: MOD:01275
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-lysine residue.","definition_xrefs":["PubMed:8597590","Unimod:276#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-[4-(2-aminoethyl)benzenesulfonyl]lysine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01275"}


id: GO:0036186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an early phagosome.","definition_xrefs":["GOC:phg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic vesicle membrane","termid":"GO:0030670"},{"relation_name":"part_of","term_name":"early phagosome","termid":"GO:0032009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"early phagosome membrane","synonyms":[{"name":"early phagocytic vesicle membrane","type":"exact"}],"termid":"GO:0036186"}


id: PBO:0083792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein of the inner mitochondrial membrane; peripherally localized; component of the TIM22 complex, which is a twin-pore translocase that mediates insertion of numerous multispanning inner membrane proteins","termid":"PBO:0083792"}


id: PBO:0069069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 316, pseudogene","termid":"PBO:0069069"}


id: PBO:0081338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 137, pseudogene","termid":"PBO:0081338"}


id: MONDO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vestibular nystagmus (obsolete MONDO:0001872)","secondary_identifiers":["DOID:14070","ICD9:379.54","SCTID:46888001"],"synonyms":[{"name":"Nystagmus associated with disorder of the vestibular system","type":"exact"},{"name":"obsolete vestibular nystagmus (disease)","type":"exact"},{"name":"vestibular nystagmus","type":"exact"}],"termid":"MONDO:0001872","xrefs":{"Monarch":{"xref_id":"0001872"}}}


id: GO:1903782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:nc","GOC:TermGenie","PMID:19376779","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"},{"relation_name":"regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"}


id: PBO:0002953
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental disorders","termid":"PBO:0002953"}


id: PBO:0052647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 15","termid":"PBO:0052647"}


id: PATO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's processing the form of a thin plate sheet or layer.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminar","termid":"PATO:0002124"}


id: GO:1901947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolism","type":"exact"}],"termid":"GO:1901947"}


id: PBO:0108912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG1 cohesin complex component","termid":"PBO:0108912"}


id: PBO:0044443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 12","termid":"PBO:0044443"}


id: PBO:0089065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acyl-CoA binding protein Acb1","termid":"PBO:0089065"}


id: PBO:0067097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 135, pseudogene","termid":"PBO:0067097"}


id: MONDO:0016494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete regional variant of Guillain-Barre syndrome (obsolete MONDO:0016494)","secondary_identifiers":["Orphanet:231416"],"synonyms":[{"name":"regional variant of GBS","type":"exact"},{"name":"regional variant of Guillain-Barré syndrome","type":"related"}],"termid":"MONDO:0016494","xrefs":{"Monarch":{"xref_id":"0016494"}}}


id: GO:0030003
data:
  {"annotated_genes":["SJAG_03862","SJAG_00136","SJAG_02883","SJAG_00222","SJAG_01007","SJAG_04760","SJAG_01397","SJAG_02847","SJAG_03516","SJAG_01541","SJAG_01669","SJAG_02532","SJAG_01913","SJAG_02578","SJAG_00792","SJAG_04677","SJAG_04757","SJAG_04167","SJAG_03879","SJAG_00668","SJAG_02470","SJAG_01129","SJAG_04675","SJAG_01078","SJAG_02399","SJAG_02735","SJAG_02474","SJAG_01694","SJAG_03667","SJAG_04096","SJAG_01817","SJAG_00328","SJAG_03962","SJAG_02019","SJAG_04743","SJAG_04031","SJAG_02240","SJAG_00923","SJAG_00301","SJAG_01990","SJAG_00916","SJAG_01004","SJAG_03528","SJAG_02968","SJAG_00802","SJAG_00822","SJAG_02080","SJAG_03631","SJAG_02834","SJAG_04892","SJAG_04403","SJAG_04607","SJAG_04584","SJAG_02716","SJAG_04616","SJAG_04258","SJAG_03850","SJAG_00532","SJAG_03866","SJAG_00212","SJAG_01803","SJAG_05294","SJAG_01400","SJAG_04185","SJAG_04032","SJAG_01353","SJAG_04955","SJAG_04028","SJAG_02023","SJAG_01435","SJAG_04867","SJAG_03793","SJAG_04698","SJAG_02457","SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77999,94427,100810,104102,94434],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[71150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[71416,118904,71828,98432,73899,70522,80303,100238,73774,73905,113692,80585,72676,75530,109122,78684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[93462,78391,75243,100482,108170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[58994,92627,75244,78333,94380,71507,78392,74624,104573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[74776,70510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[73952,76154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[95760,78441,72621,100239,70922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[95047,76218,103893,75071,100483,78640,73178,77445,104491,104628,74592,114671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[104104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[113543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[78002,92773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[100836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[73558,78221,71140,71764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[62137,69509,62033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[73315,74341,100338,101957,96155,78840,72983,95974,88357,104227,71341,80389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic cations within a cell. Monatomic cations (also called simple cations) are cations consisting of exactly one atom.","definition_xrefs":["GOC:ceb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic ion homeostasis","termid":"GO:0006873"},{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"}],"gene_count":75,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00222":null,"SJAG_00301":null,"SJAG_00328":null,"SJAG_00516":null,"SJAG_00532":null,"SJAG_00668":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_00916":null,"SJAG_00923":null,"SJAG_01004":null,"SJAG_01007":null,"SJAG_01078":null,"SJAG_01129":null,"SJAG_01353":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01541":null,"SJAG_01669":null,"SJAG_01694":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_01990":null,"SJAG_02019":null,"SJAG_02023":null,"SJAG_02080":null,"SJAG_02240":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02470":null,"SJAG_02474":null,"SJAG_02532":null,"SJAG_02578":null,"SJAG_02716":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02847":null,"SJAG_02883":null,"SJAG_02968":null,"SJAG_03516":null,"SJAG_03528":null,"SJAG_03631":null,"SJAG_03667":null,"SJAG_03793":null,"SJAG_03850":null,"SJAG_03862":null,"SJAG_03866":null,"SJAG_03879":null,"SJAG_03962":null,"SJAG_04028":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04096":null,"SJAG_04167":null,"SJAG_04185":null,"SJAG_04258":null,"SJAG_04403":null,"SJAG_04584":null,"SJAG_04607":null,"SJAG_04616":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04698":null,"SJAG_04743":null,"SJAG_04757":null,"SJAG_04760":null,"SJAG_04867":null,"SJAG_04892":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular monoatomic cation homeostasis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular cation homeostasis","type":"broad"},{"name":"cellular monoatomic cation homeostasis","type":"exact"}],"termid":"GO:0030003","terms_by_termid":{"GO:0006874":null,"GO:0006878":null,"GO:0006879":null,"GO:0006882":null,"GO:0007035":null,"GO:0010106":null,"GO:0010961":null,"GO:0030007":null,"GO:0030026":null,"GO:0030641":null,"GO:0032468":null,"GO:0033212":null,"GO:0033214":null,"GO:0033215":null,"GO:0051453":null,"GO:0098711":null}}


id: MONDO:0000533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vaginal carcinoma (obsolete MONDO:0000533)","termid":"MONDO:0000533","xrefs":{"Monarch":{"xref_id":"0000533"}}}


id: GO:0030369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ICAM-3, intercellular adhesion molecule 3, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. ICAM-3, or CD50, are constitutively expressed on monocytes, granulocytes and lymphocytes; on physiological stimulation, they become transiently phosphorylated on serine residues.","definition_xrefs":["ISBN:0198506732","GOC:signaling","PMID:7515813","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"ICAM-3 receptor activity","termid":"GO:0030369"}


id: PBO:0090763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Sco1","termid":"PBO:0090763"}


id: PBO:0060109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 10","termid":"PBO:0060109"}


id: MONDO:0800025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disease characterized by hypertelorism with facial features that can closely resemble craniofrontonasal dysplasia, such as prominent forehead, widow's peak, heavy and broad eyebrows, long palpebral fissures, ptosis, high and broad nasal bridge, short nose, low-set ears, natal teeth, thin upper lip and a grooved chin, as well as limb (i.e. fifth-finger clinodactyly, pes adductus, mild interdigital webbing), urogenital (i.e. bilateral cryptorchidism and shawl scrotum in males) and umbilical (i.e. hernia/small omphalocele) anomalies and cardiac (i.e. ventricular or atrial septal defect, patent ductus arteriosus) defects. Additional findings such as polycystic kidneys and iridochorioretinal colobomas have also been reported and psychomotor development is normal. The facial features can also resemble Aarskog and Opitz G/BBB syndromes.","definition_xrefs":["Orphanet:1519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Teebi hypertelorism syndrome","termid":"MONDO:0030639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Teebi hypertelorism syndrome 1","secondary_identifiers":["DOID:0080698","SCTID:724284005","GARD:957","OMIM:145420"],"synonyms":[{"name":"Brachycephalofrontonasal dysplasia","type":"exact"},{"name":"Teebi hypertelorism syndrome","type":"broad"},{"name":"Teebi syndrome","type":"broad"},{"name":"craniofrontonasal dysplasia, Teebi type","type":"exact"},{"name":"hypertelorism, Teebi type","type":"broad"}],"termid":"MONDO:0800025","xrefs":{"Monarch":{"xref_id":"0800025"}}}


id: GO:0140522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of joining two lipid bilayers to form a single membrane.","definition_xrefs":["PMID:11493675","PMID:32100701","PMID:32641474","PMID:10332732","PMID:12600315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"fusogenic activity","termid":"GO:0140522"}


id: PBO:0035988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_eMTOC","termid":"PBO:0035988"}


id: GO:0016331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of embryonic epithelia are generated and organized.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"}


id: PBO:0109935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mov10 RNA helicase","termid":"PBO:0109935"}


id: GO:0002876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a chronic inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chronic inflammatory response","termid":"GO:0002678"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response to antigenic stimulus","termid":"GO:0002863"},{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response to antigenic stimulus","termid":"GO:0002874"},{"relation_name":"positively_regulates","term_name":"chronic inflammatory response to antigenic stimulus","termid":"GO:0002439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chronic inflammatory response to antigenic stimulus","synonyms":[{"name":"activation of chronic inflammatory response to antigenic stimulus","type":"narrow"},{"name":"stimulation of chronic inflammatory response to antigenic stimulus","type":"narrow"},{"name":"up regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"up-regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"upregulation of chronic inflammatory response to antigenic stimulus","type":"exact"}],"termid":"GO:0002876"}


id: PBO:0067876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 178","termid":"PBO:0067876"}


id: GO:0008776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate = ADP + acetyl phosphate.","definition_xrefs":["EC:2.7.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"acetate kinase activity","secondary_identifiers":["RHEA:11352","MetaCyc:ACETATEKIN-RXN"],"synonyms":[{"name":"AK activity","type":"related"},{"name":"ATP:acetate phosphotransferase activity","type":"related"},{"name":"AckA","type":"related"},{"name":"acetate kinase (phosphorylating) activity","type":"related"},{"name":"acetic kinase activity","type":"related"},{"name":"acetokinase activity","type":"related"}],"termid":"GO:0008776"}


id: FYPO:0002310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GMP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal GMP binding","termid":"FYPO:0002310"}


id: PR:Q9C106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01373","PANTHER:PTHR12949:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.03","secondary_identifiers":["UniProtKB:Q9C106"],"synonyms":[{"name":"RNA polymerase III subunit C3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C82 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3C","type":"exact"}],"termid":"PR:Q9C106"}


id: GO:0070861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"regulates","term_name":"protein exit from endoplasmic reticulum","termid":"GO:0032527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of protein exit from endoplasmic reticulum","synonyms":[{"name":"regulation of protein exit from ER","type":"exact"},{"name":"regulation of protein export from ER","type":"exact"},{"name":"regulation of protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0070861"}


id: GO:0030919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-serine to form peptidyl-O-acetyl-L-serine.","definition_xrefs":["PMID:7309355","RESID:AA0364","PMID:489587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"peptidyl-serine acetylation","termid":"GO:0030920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine O-acetylation","termid":"GO:0030919"}


id: PBO:0083297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene VMA4/YOR332W","termid":"PBO:0083297"}


id: PBO:0085375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINc domain endonuclease; required for early cleavage of 35S pre-rRNA and maturation of 18S rRNA; component of the SSU (small subunit) processome involved in 40S ribosomal subunit biogenesis; copurifies with Faf1p","termid":"PBO:0085375"}


id: GO:0018549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanethiol + O2 + H2O = formaldehyde + hydrogen sulfide + hydrogen peroxide.","definition_xrefs":["EC:1.8.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"methanethiol oxidase activity","secondary_identifiers":["MetaCyc:METHANETHIOL-OXIDASE-RXN","UM-BBD_reactionID:r0209","RHEA:11812"],"synonyms":[{"name":"(MM)-oxidase activity","type":"related"},{"name":"MT-oxidase activity","type":"related"},{"name":"methanethiol:oxygen oxidoreductase activity","type":"related"},{"name":"methyl mercaptan oxidase activity","type":"related"},{"name":"methylmercaptan oxidase activity","type":"related"}],"termid":"GO:0018549"}


id: MONDO:0020511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most frequent type of acute lymphoblastic leukemia. Approximately 75% of cases occur in children under six years of age. This is a good prognosis leukemia. In the pediatric age group the complete remission rate is approximately 95% and the disease free survival rate is 70%. Approximately 80% of children appear to be cured. In the adult age group the complete remission rate is 60-85%. (WHO, 2001)","definition_xrefs":["NCIT:C8644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"precursor B-cell acute lymphoblastic leukemia","secondary_identifiers":["DOID:0080638","MEDGEN:83896","NANDO:2200001","UMLS:C0349636","icd11.foundation:1099674056","ICDO:9836/3","NANDO:2200022","Orphanet:99860","GARD:16920"],"synonyms":[{"name":"B acute lymphoblastic leukaemia","type":"broad"},{"name":"B acute lymphoblastic leukemia","type":"broad"},{"name":"B cell acute lymphocytic leukaemia","type":"broad"},{"name":"B cell acute lymphocytic leukemia","type":"broad"},{"name":"B cell precursor type acute leukaemia","type":"exact"},{"name":"B cell precursor type acute leukemia","type":"exact"},{"name":"B-ALL","type":"broad"},{"name":"B-cell acute lymphoblastic leukaemia","type":"broad"},{"name":"B-cell acute lymphoblastic leukemia","type":"broad"},{"name":"B-cell acute lymphocytic leukaemia","type":"broad"},{"name":"B-cell acute lymphocytic leukemia","type":"broad"},{"name":"B-cell lymphoblastic leukaemia","type":"broad"},{"name":"B-cell lymphoblastic leukemia","type":"broad"},{"name":"B-cell precursor type acute leukaemia","type":"exact"},{"name":"B-cell precursor type acute leukemia","type":"exact"},{"name":"B-cell type acute leukaemia","type":"broad"},{"name":"B-cell type acute leukemia","type":"broad"},{"name":"B-precursor ALL","type":"exact"},{"name":"acute B cell lymphocytic leukaemia","type":"broad"},{"name":"acute B cell lymphocytic leukemia","type":"broad"},{"name":"acute B-cell lymphocytic leukaemia","type":"broad"},{"name":"acute B-cell lymphocytic leukemia","type":"broad"},{"name":"precursor B-cell acute lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor B-cell acute lymphocytic leukaemia","type":"exact"},{"name":"precursor B-cell acute lymphocytic leukemia","type":"exact"},{"name":"precursor B-cell acute lymphocytic leukemia/lymphoma","type":"exact"},{"name":"precursor B-lymphoblastic leukaemia","type":"exact"},{"name":"precursor B-lymphoblastic leukaemia (B-precursor ALL)","type":"exact"},{"name":"precursor B-lymphoblastic leukemia","type":"exact"},{"name":"precursor B-lymphoblastic leukemia (B-precursor ALL)","type":"exact"}],"termid":"MONDO:0020511","xrefs":{"Monarch":{"xref_id":"0020511"}}}


id: MONDO:1010899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in Japanese macaques. Affected macaques display progressive neurological deficits including visual impairment, tremor, incoordination, ataxia and impaired balance.","definition_xrefs":["PMID:30048804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, Japanese macaque","secondary_identifiers":["OMIA:001962-9542"],"synonyms":[{"name":"neuronal ceroid lipofuscinosis, 7, Japanese macaque","type":"related"}],"termid":"MONDO:1010899","xrefs":{"Monarch":{"xref_id":"1010899"}}}


id: PBO:0059625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier 1","termid":"PBO:0059625"}


id: PBO:0054726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2135","termid":"PBO:0054726"}


id: PR:P26659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TFIIH basal transcription factor complex helicase XPD subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11472:SF1","PRO:DNx","OMA:SCHPO00261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair helicase rad15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.12","secondary_identifiers":["UniProtKB:P26659"],"synonyms":[{"name":"DNA repair helicase RAD3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ERCC2","type":"exact"},{"name":"protein rhp3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P26659"}


id: PBO:0049289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 8, pseudogene","termid":"PBO:0049289"}


id: GO:0031148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one, also known as DIF-1, differentiation-inducing factor-1. DIF-1 is a secreted chlorinated molecule that controls cell fate during development of Dictyostelium cells.","definition_xrefs":["GOC:mah","PMID:10706822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one metabolic process","termid":"GO:0031147"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"DIF-1 biosynthetic process","synonyms":[{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one anabolism","type":"exact"},{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one biosynthesis","type":"exact"},{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one biosynthetic process","type":"exact"},{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one formation","type":"exact"},{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one synthesis","type":"exact"},{"name":"DIF-1 biosynthesis","type":"exact"}],"termid":"GO:0031148"}


id: GO:0031131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which one cell or group of cells receives, transduces, and responds to a signal generated by another cell or group of cells of different ancestry and developmental potential, such that the recipient cell(s) undergo a developmental change.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete reception of an inductive signal (obsolete GO:0031131)","termid":"GO:0031131"}


id: GO:0038057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tumor necrosis factor ligand superfamily member 11 (TNFSF11), a member of the tumor necrosis factor (TNF) cytokine family.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor binding","termid":"GO:0043120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TNFSF11 binding","synonyms":[{"name":"CD254 binding","type":"exact"},{"name":"ODF binding","type":"exact"},{"name":"OPGL binding","type":"exact"},{"name":"RANKL binding","type":"exact"},{"name":"TNF-related activation-induced cytokine binding","type":"exact"},{"name":"TRANCE binding","type":"exact"},{"name":"osteoclast differentiation factor binding","type":"exact"},{"name":"osteoprotegerin ligand binding","type":"exact"},{"name":"receptor activator of nuclear factor kappa-B ligand binding","type":"exact"},{"name":"tumor necrosis factor (ligand) superfamily member 11 binding","type":"exact"},{"name":"tumor necrosis factor ligand superfamily member 11 binding","type":"exact"},{"name":"tumor necrosis factor superfamily member 11 binding","type":"exact"}],"termid":"GO:0038057"}


id: PBO:0001881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 (predicted)","termid":"PBO:0001881"}


id: MONDO:0007173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrial septal defect (ASD) with atrioventricular conduction defects is an extremely rare genetic congenital heart disease characterized by the presence of ASD, mostly of the ostium secundum type, associated with conduction anomalies like atrioventricular block, atrial fibrillation or right bundle branch block.","definition_xrefs":["Orphanet:1479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 7","secondary_identifiers":["OMIM:108900","UMLS:C3276096","MEDGEN:477726","DOID:0110112","GARD:16566"],"synonyms":[{"name":"ASD with or without atrioventricular conduction defects","type":"exact"},{"name":"ASD7","type":"related"},{"name":"NKX2-5 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in NKX2-5","type":"exact"},{"name":"atrial heart septal defect type 7","type":"exact"},{"name":"atrial septal defect 7 with or without atrioventricular conduction defects","type":"related"},{"name":"atrial septal defect 7, with or without AV conduction defects","type":"exact"},{"name":"atrial septal defect-atrioventricular conduction defects syndrome","type":"exact"}],"termid":"MONDO:0007173","xrefs":{"Monarch":{"xref_id":"0007173"}}}


id: MONDO:0859234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia 8b, autosomal recessive","secondary_identifiers":["OMIM:619824","UMLS:C5676958","DOID:0081143","MEDGEN:1808468"],"termid":"MONDO:0859234","xrefs":{"Monarch":{"xref_id":"0859234"}}}


id: PBO:0059073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOCS2 divergent transcript","termid":"PBO:0059073"}


id: PBO:0080434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 18","termid":"PBO:0080434"}


id: FYPO:0007027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex during vegetative growth","termid":"FYPO:0002555"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to medial cortex, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to medial cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0007027"}


id: MONDO:0024464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined pituitary hormone deficiencies, genetic form in which the cause of the disease is a mutation in the POU1F1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"pituitary hormone deficiency, combined, 1","secondary_identifiers":["MEDGEN:414421","GARD:10601","MESH:C567803","OMIM:613038","UMLS:C2751608"],"synonyms":[{"name":"CPHD1","type":"exact"},{"name":"POU1F1 combined pituitary hormone deficiencies, genetic form","type":"exact"},{"name":"combined pituitary hormone deficiencies, genetic form caused by mutation in POU1F1","type":"exact"},{"name":"pituitary hormone deficiency, combined 1","type":"related"},{"name":"pituitary hormone deficiency, combined or isolated, 1","type":"exact"},{"name":"pituitary hormone deficiency, combined, 1","type":"exact"}],"termid":"MONDO:0024464","xrefs":{"Monarch":{"xref_id":"0024464"}}}


id: FYPO:0007083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short meiotic spindle assembles, and may begin elongation, but does not elongate normally or completely, and eventually collapses. Upon collapse the spindle may break or shrink.","definition_xrefs":["PomBase:mah","PMID:31532702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"meiotic spindle collapse","synonyms":[{"name":"broken meiotic spindle","type":"related"},{"name":"meiotic spindle breakage","type":"exact"},{"name":"spindle collapse during meiosis","type":"exact"},{"name":"spindle collapse during meiotic cell cycle","type":"related"}],"termid":"FYPO:0007083"}


id: GO:0018913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving ethylbenzene (phenylethane), a benzene derivative with an ethyl group attached to the ring, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete anaerobic ethylbenzene metabolic process (obsolete GO:0018913)","synonyms":[{"name":"anaerobic ethylbenzene metabolism","type":"exact"}],"termid":"GO:0018913"}


id: PBO:0042057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 120","termid":"PBO:0042057"}


id: GO:0140031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon phosphorylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}


id: PBO:0088315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQC complex ubiquitin-protein ligase E3 Rkr1","termid":"PBO:0088315"}


id: PBO:0005372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase complex I subunit Rpa12","termid":"PBO:0005372"}


id: GO:0030969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The spliceosome-independent cleavage and ligation of the mRNA encoding a UFP-specific transcription factor to remove a single intron, thereby increasing both the translational efficiency of the processed mRNA and the activity of the protein it encodes.","definition_xrefs":["GOC:mah","PMID:12042763","PMID:21924241"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA splicing via endonucleolytic cleavage and ligation involved in unfolded protein response (obsolete GO:0030969)","synonyms":[{"name":"HAC1 mRNA splicing","type":"narrow"},{"name":"IRE1-mediated XBP-1 mRNA splicing","type":"narrow"},{"name":"Ire1p-mediated HAC-1 mRNA splicing","type":"narrow"},{"name":"UFP-specific transcription factor mRNA processing during unfolded protein response","type":"related"},{"name":"UFP-specific transcription factor mRNA processing involved in ER UPR","type":"exact"},{"name":"UFP-specific transcription factor mRNA processing involved in ER unfolded protein response","type":"exact"},{"name":"UFP-specific transcription factor mRNA processing involved in endoplasmic reticulum UPR","type":"exact"},{"name":"UFP-specific transcription factor mRNA processing involved in endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"XBP1 mRNA splicing","type":"exact"},{"name":"XBP1 mRNA splicing under conditions of endoplasmic reticulum (ER) stress","type":"narrow"},{"name":"XBP1 mRNA splicing, via endonucleolytic cleavage and ligation","type":"exact"},{"name":"non-spliceosomal mRNA splicing in the unfolded protein response pathway","type":"exact"},{"name":"spliceosome-independent UFP-specific transcription factor mRNA processing","type":"exact"},{"name":"unconventional mRNA splicing involved in UPR","type":"exact"},{"name":"unconventional splicing of XBP1 mRNA","type":"exact"},{"name":"unfolded protein response, cleavage of primary transcript encoding UFP-specific transcription factor","type":"related"},{"name":"unfolded protein response, ligation of mRNA encoding UFP-specific transcription factor by RNA ligase","type":"related"}],"termid":"GO:0030969"}


id: GO:0047292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6AS,11AS)-3,6A,9-trihydroxypterocarpan + dimethylallyl-pyrophosphate = glyceollin + diphosphate.","definition_xrefs":["EC:2.5.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"trihydroxypterocarpan dimethylallyltransferase activity","synonyms":[{"name":"dimethylallyl-diphosphate:(6aS,11aS)-3,6a,9-trihydroxypterocarpan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:(6aS,11aS)-3,6a,9-trihydroxypterocarpan dimethyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:3,6a,9-trihydroxypterocarpan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:trihydroxypterocarpan dimethylallyl transferase activity","type":"related"}],"termid":"GO:0047292"}


id: PR:Q9Y7N4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-amino-acid oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04803","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino-acid oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.07c","secondary_identifiers":["UniProtKB:Q9Y7N4"],"synonyms":[{"name":"DAAO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAMOX (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DAO","type":"exact"}],"termid":"PR:Q9Y7N4"}


id: PATO:0001880
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having a tail or tail-like projection.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exserted","termid":"PATO:0000623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caudate","synonyms":[{"name":"caudal","type":"exact"},{"name":"tailed","type":"related"}],"termid":"PATO:0001880"}


id: PBO:0040336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 2","termid":"PBO:0040336"}


id: PBO:0082272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amphiphysin-like lipid raft protein; N-BAR domain protein that interacts with Rvs167p and regulates polarization of the actin cytoskeleton, endocytosis, cell polarity, cell fusion and viability following starvation or osmotic stress","termid":"PBO:0082272"}


id: PBO:0054558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1960","termid":"PBO:0054558"}


id: PBO:0057761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1976","termid":"PBO:0057761"}


id: GO:0090239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of histone H4 acetylation, the modification of histone H4 by the addition of an acetyl group.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4 acetylation (obsolete GO:0090239)","termid":"GO:0090239"}


id: MONDO:0045058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma or carcinoma of the pituitary gland that produces corticotropin.","definition_xrefs":["NCIT:C7909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-producing pituitary gland neoplasm","secondary_identifiers":["UMLS:C0278862","MEDGEN:82997"],"synonyms":[{"name":"ACTH producing pituitary gland neoplasm","type":"exact"},{"name":"ACTH-producing pituitary gland neoplasm","type":"exact"},{"name":"ACTH-producing pituitary neoplasm","type":"exact"},{"name":"ACTH-producing pituitary tumor","type":"exact"},{"name":"ACTH-producing pituitary tumour","type":"exact"},{"name":"ACTH-secreting tumor of pituitary","type":"exact"},{"name":"ACTH-secreting tumor of the pituitary","type":"exact"},{"name":"ACTH-secreting tumour of pituitary","type":"exact"},{"name":"ACTH-secreting tumour of the pituitary","type":"exact"},{"name":"adrenocorticotropin producing pituitary gland tumor","type":"exact"},{"name":"adrenocorticotropin producing pituitary gland tumour","type":"exact"},{"name":"adrenocorticotropin secreting neoplasm of pituitary","type":"exact"},{"name":"adrenocorticotropin secreting neoplasm of the pituitary","type":"exact"},{"name":"adrenocorticotropin secreting pituitary gland tumor","type":"exact"},{"name":"adrenocorticotropin secreting pituitary gland tumour","type":"exact"},{"name":"adrenocorticotropin secreting tumor of pituitary","type":"exact"},{"name":"adrenocorticotropin secreting tumor of the pituitary","type":"exact"},{"name":"adrenocorticotropin secreting tumour of pituitary","type":"exact"},{"name":"adrenocorticotropin secreting tumour of the pituitary","type":"exact"},{"name":"corticotropin secreting pituitary gland neoplasm","type":"exact"},{"name":"pituitary corticotropin secreting neoplasm","type":"exact"},{"name":"pituitary corticotropin secreting tumor","type":"exact"},{"name":"pituitary corticotropin secreting tumour","type":"exact"}],"termid":"MONDO:0045058","xrefs":{"Monarch":{"xref_id":"0045058"}}}


id: PBO:0089940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random septum position protein, DNAJ domain protein Rsp1","termid":"PBO:0089940"}


id: MONDO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"stenosis of lacrimal punctum","secondary_identifiers":["MEDGEN:509869","DOID:13653","SCTID:74783009","UMLS:C0155244","ICD9:375.52"],"termid":"MONDO:0001767","xrefs":{"Monarch":{"xref_id":"0001767"}}}


