# terms

id: GO:0044421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular region part (obsolete GO:0044421)","synonyms":[{"name":"extracellular structure","type":"related"}],"termid":"GO:0044421"}


id: GO:0019627
data:
  {"annotated_genes":["SJAG_00392","SJAG_04896","SJAG_01461","SJAG_04577","SJAG_00412","SJAG_00035","SJAG_05338","SJAG_04299","SJAG_04679","SJAG_02766","SJAG_00635","SJAG_03398","SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95746,97144,114398],"is_not":false,"summary":null,"term":"GO:0019627"},{"annotations":[65717,58989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043419"},{"annotations":[98493,57800,103767,118719,106845,92783,70865,111410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000050"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving urea, the water soluble compound O=C-(NH2)2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_02766":null,"SJAG_03398":null,"SJAG_04299":null,"SJAG_04577":null,"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0071941","GO:0008150"],"is_obsolete":false,"name":"urea metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"urea metabolism","type":"exact"}],"termid":"GO:0019627","terms_by_termid":{"GO:0000050":null,"GO:0019627":null,"GO:0043419":null}}


id: MONDO:0007240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant inherited cardiac bundle branch disorder which can progress to complete heart block.","definition_xrefs":["NCIT:C126651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conduction system disorder","termid":"MONDO:0005449"},{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"},{"relation_name":"is_a","term_name":"progressive familial heart block","termid":"MONDO:0019490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"progressive familial heart block, type 1A","secondary_identifiers":["UMLS:C1879286","MEDGEN:406301","MESH:D002037","GARD:1093","DOID:0111074","OMIM:113900"],"synonyms":[{"name":"Cardiac conduction defect, nonprogressive","type":"related"},{"name":"Cardiac conduction defect, progressive","type":"related"},{"name":"Lenegre disease","type":"related"},{"name":"Lenegre's disease","type":"exact"},{"name":"Lenegre's syndrome","type":"related"},{"name":"Lenegre-Lev disease","type":"related"},{"name":"Lev disease","type":"related"},{"name":"PFHB1A","type":"exact"},{"name":"SCN5A progressive familial heart block","type":"exact"},{"name":"heart block progressive familial type 1","type":"related"},{"name":"heart block, nonprogressive","type":"related"},{"name":"heart block, progressive familial, type 1","type":"related"},{"name":"heart block, progressive, type IA","type":"exact"},{"name":"hereditary bundle branch system defect","type":"related"},{"name":"progressive familial heart block caused by mutation in SCN5A","type":"exact"},{"name":"progressive familial heart block type 1A","type":"related"},{"name":"progressive familial heart block type IA","type":"related"},{"name":"progressive familial heart block, type IA","type":"exact"}],"termid":"MONDO:0007240","xrefs":{"Monarch":{"xref_id":"0007240"}}}


id: PBO:0083544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps TRP1/YDR007W on opposite strand","termid":"PBO:0083544"}


id: MONDO:0100246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing migraines with or without aura.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to","secondary_identifiers":["OMIMPS:157300"],"synonyms":[{"name":"migraine with or without aura, susceptibility","type":"exact"},{"name":"migraine with or without aura, susceptibility to","type":"exact"}],"termid":"MONDO:0100246","xrefs":{"Monarch":{"xref_id":"0100246"}}}


id: PBO:0082432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 C-terminal domain protein needed for recovery from DNA damage; implicated in Mms22-dependent DNA repair during S phase; involved in recruiting SMC5/6 complex to double-strand breaks; DNA damage induces phosphorylation by Mec1p at one or more SQ/TQ motifs; interacts with Mms22p and Slx4p; has four BRCT domains; has a role in regulation of Ty1 transposition; relative distribution to nuclear foci increases upon DNA replication stress","termid":"PBO:0082432"}


id: MONDO:0006995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive neurological disorder characterized by the limitation of movement of the spinal cord within the spine. It is caused by the presence of congenital or acquired tissue attachments in the spinal cord. Signs and symptoms include low back pain, scoliosis, weakness in the legs, and incontinence.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"spinal cord disorder","termid":"MONDO:0002545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tethered spinal cord syndrome","secondary_identifiers":["UMLS:C0080218","NCIT:C101214","SCTID:249491000119100","ICD9:756.19","MEDGEN:36387","SCTID:67531005","EFO:1001210","MESH:D016135","ICD9:741","NCIT:C99080","DOID:1089"],"synonyms":[{"name":"spinal cord syndrome","type":"exact"},{"name":"tethered cord","type":"exact"}],"termid":"MONDO:0006995","xrefs":{"Monarch":{"xref_id":"0006995"}}}


id: SO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the first two or last two bases of an intron, or the 5th base from the start of the intron in the orientation of the transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"},{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_site_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"VAT:spliceOverlap","type":"exact"},{"name":"essential_splice_site","type":"exact"},{"name":"splice site variant","type":"exact"}],"termid":"SO:0001629"}


id: MONDO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma of the colon characterized by the presence of malignant glandular epithelial cells which contain prominent intracytoplasmic mucin (signet ring cells). The signet ring cells constitute more than 50% of the malignant cells.","definition_xrefs":["NCIT:C7967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"colorectal signet ring cell carcinoma","termid":"MONDO:0044336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colon signet ring cell adenocarcinoma","secondary_identifiers":["MEDGEN:313039","DOID:3033","UMLS:C1707436"],"synonyms":[{"name":"colon signet Ring cell adenocarcinoma","type":"exact"},{"name":"colon signet ring adenocarcinoma","type":"related"},{"name":"colonic signet Ring adenocarcinoma","type":"exact"},{"name":"colonic signet Ring cell adenocarcinoma","type":"exact"},{"name":"signet Ring cell adenocarcinoma of colon","type":"exact"},{"name":"signet Ring cell adenocarcinoma of the colon","type":"exact"},{"name":"signet Ring cell colon adenocarcinoma","type":"exact"}],"termid":"MONDO:0002495","xrefs":{"Monarch":{"xref_id":"0002495"}}}


id: RO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A mereological relationship or a topological relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mereotopologically_related_to","termid":"RO:0002323"}


id: FYECO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing glycerol as the sole carbon source, yeast extract and other components. The concentration of glycerol is typically around 2-3% and supplemented with trace amounts of another carbon source (e.g. glucose).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol YE","secondary_identifiers":["FYECO:0000083"],"synonyms":[{"name":"glycerol rich medium","type":"broad"},{"name":"glycerol sole carbon source YE","type":"related"},{"name":"glycerol sole carbon source rich medium","type":"exact"},{"name":"non-fermentable glycerol sole carbon source rich medium","type":"exact"},{"name":"nonfermentable glycerol sole carbon source rich medium","type":"related"}],"termid":"FYECO:0000138"}


id: GO:0008712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-D-glycero-D-manno-heptose = ADP-L-glycero-D-manno-heptose.","definition_xrefs":["EC:5.1.3.20","RHEA:17577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"ADP-glyceromanno-heptose 6-epimerase activity","secondary_identifiers":["KEGG_REACTION:R05176","MetaCyc:5.1.3.20-RXN"],"synonyms":[{"name":"ADP-L-glycero-D-manno-heptose 6-epimerase activity","type":"related"},{"name":"ADPglyceromanno-heptose 6-epimerase activity","type":"related"}],"termid":"GO:0008712"}


id: PBO:0046365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 2","termid":"PBO:0046365"}


id: MONDO:0017553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humero-ulnar synostosis","termid":"MONDO:0019782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humero-ulnar synostosis, bilateral","secondary_identifiers":["GARD:21220","MEDGEN:1776945","icd11.foundation:1331627150","Orphanet:295215","UMLS:C5438980"],"synonyms":[{"name":"humero-ulnar fusion, bilateral","type":"exact"}],"termid":"MONDO:0017553","xrefs":{"Monarch":{"xref_id":"0017553"}}}


id: MONDO:0010457
data:
  {"annotated_genes":["SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87213],"is_not":false,"summary":null,"term":"MONDO:0010457"}]},"cv_name":"mondo","definition":"Ogden syndrome is a rare, genetic progeroid syndrome characterized by a variable phenotype including postnatal growth delay, severe global developmental delay, hypotonia, non-specific dysmorphic facies with aged appearance and cryptorchidism, as well as cardiac arrthymias and skeletal anomalies. Patients typically present with widely opened fontanels, mainly truncal hypotonia, a waddling gait with hypertonia of the extremities, small hands and feet, broad great toes, scoliosis and redundant skin with lack of subcutaneous fat.","definition_xrefs":["Orphanet:276432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"NAA10-related syndrome","termid":"MONDO:0100124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"Ogden syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:477078","OMIM:300855","MESH:C536107","HGNC:7645","NCIT:C188215","DOID:0050781","UMLS:C3275447","GARD:17281"],"synonyms":[{"name":"Acetyl-CoA:arylamine n-acetyltransferase","type":"related"},{"name":"N acetyltransferase 1 deficiency","type":"related"},{"name":"N acetyltransferase deficiency","type":"related"},{"name":"N-alpha-acetyltransferase","type":"exact"},{"name":"N-terminal acetyltransferase deficiency","type":"exact"},{"name":"NAT1 deficiency","type":"related"},{"name":"OGDNS","type":"exact"},{"name":"Ogden syndrome","type":"exact"},{"name":"Ogden syndrome, X-linked recessive, X-linked dominant","type":"exact"},{"name":"X-linked malformation and infantile lethality syndrome","type":"exact"},{"name":"arylamine n-acetyltransferase 1","type":"related"},{"name":"premature ageing appearance-developmental delay-cardiac arrhythmia syndrome","type":"exact"},{"name":"premature aging appearance-developmental delay-cardiac arrhythmia syndrome","type":"exact"}],"termid":"MONDO:0010457","terms_by_termid":{"MONDO:0010457":null},"xrefs":{"Monarch":{"xref_id":"0010457"}}}


id: PBO:0080653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 pseudogene 2","termid":"PBO:0080653"}


id: PR:Q10165
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnt6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosylation factor GTPase-activating protein cnt6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.10","synonyms":[{"name":"Spom972h-cnt6","type":"exact"}],"termid":"PR:Q10165"}


id: PR:O13979
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug105 gene.","definition_xrefs":["UniProtKB:O13979","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 105 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.04","synonyms":[{"name":"Spom972h-mug105","type":"exact"}],"termid":"PR:O13979"}


id: PBO:0082480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carboxyl methyltransferase; methylates the C terminus of the protein phosphatase 2A catalytic subunit (Pph21p or Pph22p), which is important for complex formation with regulatory subunits; required for methionine to inhibit autophagy and promote growth","termid":"PBO:0082480"}


id: GO:1905912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","PMID:22362515","GO_REF:0000058","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium ion export across plasma membrane","synonyms":[{"name":"regulation of calcium ion efflux from cell","type":"exact"},{"name":"regulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905912"}


id: GO:1900036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to heat.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to heat","termid":"GO:1900034"},{"relation_name":"positively_regulates","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to heat","synonyms":[{"name":"activation of cellular response to heat","type":"related"},{"name":"activation of cellular response to heat stress","type":"exact"},{"name":"positive regulation of cellular response to heat stress","type":"exact"},{"name":"up regulation of cellular response to heat","type":"related"},{"name":"up regulation of cellular response to heat stress","type":"exact"},{"name":"up-regulation of cellular response to heat","type":"related"},{"name":"up-regulation of cellular response to heat stress","type":"exact"},{"name":"upregulation of cellular response to heat","type":"related"},{"name":"upregulation of cellular response to heat stress","type":"exact"}],"termid":"GO:1900036"}


id: GO:1901084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pyrrolizidine alkaloid.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrrolizidine alkaloid catabolic process (obsolete GO:1901084)","synonyms":[{"name":"pyrrolizidine alkaloid breakdown","type":"exact"},{"name":"pyrrolizidine alkaloid catabolism","type":"exact"},{"name":"pyrrolizidine alkaloid degradation","type":"exact"}],"termid":"GO:1901084"}


id: PBO:0064751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 87","termid":"PBO:0064751"}


id: MONDO:0008196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parastremmatic dwarfism is a very rare chondrodysplasia characterized by severe dwarfism, kyphoscoliosis, stiffness of large joints and distortion of lower limbs.","definition_xrefs":["Orphanet:2646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRPV4-related bone disorder","termid":"MONDO:0018240"},{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parastremmatic dwarfism","secondary_identifiers":["MESH:C537172","icd11.foundation:431936114","OMIM:168400","SCTID:722210007","UMLS:C1868616","GARD:4222","MEDGEN:358366","DOID:0111539"],"synonyms":[{"name":"Parastremmatic dysplasia","type":"related"},{"name":"parastremmatic dwarfism","type":"exact"}],"termid":"MONDO:0008196","xrefs":{"Monarch":{"xref_id":"0008196"}}}


id: GO:0003073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the force with which blood travels through the systemic arterial circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}


id: GO:0004935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine and transmitting the signal across the membrane by activating the alpha-subunit of an associated heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1274","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"adrenergic receptor activity","secondary_identifiers":["Wikipedia:Adrenergic_receptor"],"synonyms":[{"name":"adrenoceptor activity","type":"exact"}],"termid":"GO:0004935"}


id: PBO:0048689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 like 1","termid":"PBO:0048689"}


id: GO:0052585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH2 group of donors, with a quinone or similar compound as acceptor (obsolete GO:0052585)","termid":"GO:0052585"}


id: PBO:0028854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_glucose_starvation","termid":"PBO:0028854"}


id: MONDO:0020294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atrial defect and interatrial communication (obsolete MONDO:0020294)","secondary_identifiers":["Orphanet:98727"],"synonyms":[{"name":"atrial defect and interauricular communication","type":"exact"},{"name":"rare atrial defect and interatrial communication","type":"related"}],"termid":"MONDO:0020294","xrefs":{"Monarch":{"xref_id":"0020294"}}}


id: PATO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of the bearer's number of homologous sets of chromosomes in the nucleus or primary chromosome-containing compartment of the cell, each set essentially coding for all the biological traits of the organism.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Ploidy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ploidy","termid":"PATO:0001374"}


id: FYPO:0000568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abnormal shmoo directionality","termid":"FYPO:0005791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301","FYPO:0000002"],"is_obsolete":false,"name":"abnormal shmoo formation","synonyms":[{"name":"abnormal conjugation tube formation","type":"exact"},{"name":"abnormal mating projection assembly","type":"exact"},{"name":"abnormal mating projection formation","type":"exact"},{"name":"abnormal shmoo assembly","type":"exact"},{"name":"shmoo formation: abnormal","type":"related"}],"termid":"FYPO:0000568"}


id: FYPO:0004702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable cytoplasmic microtubules.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules absent from cell","termid":"FYPO:0002004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"cytoplasmic microtubules absent from cell","synonyms":[{"name":"absent cytoplasmic microtubules","type":"exact"},{"name":"cytoplasmic microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0004702"}


id: PBO:0056749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 5, N6-adenosine","termid":"PBO:0056749"}


id: GO:0033567
data:
  {"annotated_genes":["SJAG_02294","SJAG_05232","SJAG_04183","SJAG_00618","SJAG_00198","SJAG_02690","SJAG_02199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104470,101823,100937,72613,92979,95383,100971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The DNA metabolic process, occurring during lagging strand synthesis, by which RNA primers are removed from Okazaki fragments, the resulting gaps filled by DNA polymerization, and the ends ligated to form a continuous strand.","definition_xrefs":["GOC:mah","ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"lagging strand elongation","termid":"GO:0006273"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00618":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_04183":null,"SJAG_05232":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"DNA replication, Okazaki fragment processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033567","terms_by_termid":{"GO:1903461":null}}


id: PBO:0046688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit beta lysine methyltransferase","termid":"PBO:0046688"}


id: MOD:00211
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and a glycine residue by a thioester bond to form S-glycyl-L-cysteine.","definition_xrefs":["RESID:AA0206","ChEBI:22050","PubMed:3306404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(glycyl)-L-cysteine (Cys-Gly)","synonyms":[{"name":"(2R)-2-amino-3-[(aminoacetyl)sulfanyl]propanoic acid","type":"exact"},{"name":"1-(cystein-S-yl)-glycinate","type":"exact"},{"name":"ACT_SITE Glycyl thioester intermediate","type":"exact"},{"name":"S-(2-amino-1-oxoethyl)cysteine","type":"exact"},{"name":"S-(glycyl)-L-cysteine","type":"exact"},{"name":"XLNK-SCys-1Gly","type":"exact"},{"name":"glycine cysteine thioester","type":"exact"}],"termid":"MOD:00211"}


id: PBO:0004772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-2","termid":"PBO:0004772"}


id: GO:0090071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of ribosome biogenesis","termid":"GO:0090069"},{"relation_name":"negatively_regulates","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of ribosome biogenesis","termid":"GO:0090071"}


id: PBO:0027231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_stationary_phase","termid":"PBO:0027231"}


id: PBO:0081044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3HC-type containing 1","termid":"PBO:0081044"}


id: PBO:0026674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0026674"}


id: MONDO:0016489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Delta-beta-thalassemia is a form of beta-thalassemia characterized by decreased or absent synthesis of the delta- and beta-globin chains with a compensatory increase in expression of fetal gamma-chain synthesis.","definition_xrefs":["Orphanet:231237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-thalassemia and related diseases","termid":"MONDO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"delta-beta-thalassemia","secondary_identifiers":["MESH:C562716","ICD9:282.49","UMLS:C0271985","ICD10CM:D56.2","DOID:0080773","MEDGEN:78790","NCIT:C172823","MedDRA:10012236","SCTID:16360009","GARD:17165"],"termid":"MONDO:0016489","xrefs":{"Monarch":{"xref_id":"0016489"}}}


id: PBO:0081086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 16","termid":"PBO:0081086"}


id: PBO:0043462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 3","termid":"PBO:0043462"}


id: GO:0032190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to acrosin, a protein that is found in the acrosomes of sperm and possesses protease and carbohydrate binding activities.","definition_xrefs":["PMID:12398221","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"acrosin binding","secondary_identifiers":["GO:0032192","GO:0032191"],"synonyms":[{"name":"acrosin heavy chain binding","type":"narrow"},{"name":"acrosin light chain binding","type":"narrow"}],"termid":"GO:0032190"}


id: PBO:0060133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 34","termid":"PBO:0060133"}


id: GO:0005806
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi-ER transport vesicle (obsolete GO:0005806)","synonyms":[{"name":"Golgi-ER transport vesicle","type":"exact"}],"termid":"GO:0005806"}


id: MONDO:0010621
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85658],"is_not":false,"summary":null,"term":"MONDO:0010621"}]},"cv_name":"mondo","definition":"CHILD syndrome (Congenital Hemidysplasia with Ichthyosiform nevus and Limb Defects, CS) is an X-linked dominant genodermatosis characterized by unilateral inflammatory and scaling skin lesions with ipsilateral visceral and limb anomalies.","definition_xrefs":["Orphanet:139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"X-linked ichthyosis syndrome","termid":"MONDO:0017269"},{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"},{"relation_name":"is_a","term_name":"chondrodysplasia punctata","termid":"MONDO:0019701"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"CHILD syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111822","NANDO:1200629","GARD:6039","MESH:C562515","NANDO:2200998","MEDGEN:82697","ICD9:759.89","NORD:1284","OMIM:308050","SCTID:17608003","UMLS:C0265267","NANDO:2201358"],"synonyms":[{"name":"CHILD syndrome","type":"exact"},{"name":"CHILD syndrome, X-linked dominant","type":"exact"},{"name":"Ichthyosis, CHILD Syndrome","type":"exact"},{"name":"child nevus","type":"exact"},{"name":"child syndrome","type":"exact"},{"name":"congenital hemidysplasia with ichthyosiform erythroderma and limb defects","type":"related"},{"name":"congenital hemidysplasia with ichthyosiform nevus and limb defects","type":"related"},{"name":"congenital hemidysplasia with ichthyosiform nevus and limbs defects","type":"exact"},{"name":"ichthyosiform erythroderma, unilateral, with ipsilateral malformations, especially absence deformity of limbs","type":"related"},{"name":"ichthyosis, child syndrome","type":"related"}],"termid":"MONDO:0010621","terms_by_termid":{"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0010621"}}}


id: GO:1990734
data:
  {"annotated_genes":["SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109929],"is_not":false,"summary":null,"term":"GO:1990734"}]},"cv_name":"biological_process","definition":"Any process in which an astral microtubule is maintained in a specific location in a cell by attachment to a mitotic spindle pole body. Microtubules attach to spindle pole bodies at the minus end.","definition_xrefs":["PMID:15004232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring at spindle pole body","termid":"GO:0034631"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"astral microtubule anchoring at mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990734","terms_by_termid":{"GO:1990734":null}}


id: PATO:0000541
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000541 photosensitivity value (obsolete PATO:0000541)","termid":"PATO:0000541"}


id: PBO:0086033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, contains a putative zinc-binding domain; expressed during sporulation; SPS18 has a paralog, GCS1, that arose from the whole genome duplication","termid":"PBO:0086033"}


id: GO:1905062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardioblast proliferation.","definition_xrefs":["GOC:BHF","PMID:24236097","GOC:TermGenie","GOC:BHF_miRNA","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast proliferation","termid":"GO:0003264"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000138"},{"relation_name":"positively_regulates","term_name":"cardioblast proliferation","termid":"GO:0003263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardioblast proliferation","synonyms":[{"name":"activation of cardioblast proliferation","type":"narrow"},{"name":"up regulation of cardioblast proliferation","type":"exact"},{"name":"up-regulation of cardioblast proliferation","type":"exact"},{"name":"upregulation of cardioblast proliferation","type":"exact"}],"termid":"GO:1905062"}


id: PR:O13740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde1 gene.","definition_xrefs":["UniProtKB:O13740","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei4-dependent protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.05c","synonyms":[{"name":"Spom972h-mde1","type":"exact"}],"termid":"PR:O13740"}


id: MONDO:0035432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"limb-girdle muscular dystrophy","termid":"MONDO:0016971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"POMGNT2-related limb-girdle muscular dystrophy R24","secondary_identifiers":["ICD10CM:G71.0","Orphanet:565899","UMLS:C5680123","MEDGEN:1830095","GARD:22271"],"synonyms":[{"name":"LGMD type R24","type":"exact"},{"name":"POMGNT2-related LGMD R24","type":"exact"},{"name":"POMGNT2-related muscular dystrophy","type":"exact"},{"name":"limb-girdle muscular dystrophy type R24","type":"exact"}],"termid":"MONDO:0035432","xrefs":{"Monarch":{"xref_id":"0035432"}}}


id: GO:0045233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A receptor found on the surface of natural killer cells which binds Class I MHC antigens and is required for activation of NK activity. It belongs to the Ly49i family.","definition_xrefs":["GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete natural killer cell receptor activity (obsolete GO:0045233)","synonyms":[{"name":"Ly49i","type":"narrow"},{"name":"NK cell receptor activity","type":"exact"},{"name":"natural killer cell receptor activity","type":"exact"}],"termid":"GO:0045233"}


id: MONDO:0022094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cartwright Nelson Fryns syndrome","secondary_identifiers":["MEDGEN:443968","UMLS:C2931062","MESH:C535917"],"synonyms":[{"name":"Growth retardation, severe intellectual disability, acral limb deficiencies with poorly keratinized nails","type":"related"},{"name":"Growth retardation, severe mental retardation, acral limb deficiencies with poorly keratinized nails","type":"related"}],"termid":"MONDO:0022094","xrefs":{"Monarch":{"xref_id":"0022094"}}}


id: PBO:0063395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6IP pseudogene 2","termid":"PBO:0063395"}


id: PBO:0049217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 1","termid":"PBO:0049217"}


id: FYPO:0004762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore","termid":"FYPO:0005209"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during meiosis","synonyms":[{"name":"abnormal protein localisation to kinetochore during meiosis","type":"exact"},{"name":"abnormal protein localization to kinetochore during meiotic nuclear division","type":"exact"},{"name":"abnormal protein localization to meiotic kinetochore","type":"exact"}],"termid":"FYPO:0004762"}


id: PBO:0067175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 231, pseudogene","termid":"PBO:0067175"}


id: GO:0097479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a synaptic vesicle or vesicles are transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle localization","synonyms":[{"name":"establishment and maintenance of synaptic vesicle localization","type":"exact"},{"name":"establishment and maintenance of synaptic vesicle position","type":"exact"},{"name":"synaptic vesicle localisation","type":"exact"}],"termid":"GO:0097479"}


id: PATO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior to","synonyms":[{"name":"preceding","type":"exact"},{"name":"ventral_to","type":"exact"}],"termid":"PATO:0001632"}


id: PBO:0073580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 2A","termid":"PBO:0073580"}


id: GO:0009855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or part of an organism with respect to a single longitudinal plane. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of bilateral symmetry","synonyms":[{"name":"determination of bilateral asymmetry","type":"exact"}],"termid":"GO:0009855"}


id: MONDO:0003182
data:
  {"annotated_genes":["SJAG_02242","SJAG_02919","SJAG_00668","SJAG_01352","SJAG_05289","SJAG_03815","SJAG_01537","SJAG_03923","SJAG_00853","SJAG_04178","SJAG_01260","SJAG_03170","SJAG_01317","SJAG_03345","SJAG_02289","SJAG_04567","SJAG_04489","SJAG_02509","SJAG_03598","SJAG_01522","SJAG_00053","SJAG_04907","SJAG_00754","SJAG_03894","SJAG_02399","SJAG_04321","SJAG_03495","SJAG_04084","SJAG_02695","SJAG_07000","SJAG_04387","SJAG_02286","SJAG_03328"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87039,87040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008453"},{"annotations":[86911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[87599,85570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[87101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[87212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[85977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[85724,85723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[86836,86837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[86964,86963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[86174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008026"},{"annotations":[85584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011436"},{"annotations":[85470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011585"},{"annotations":[87068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[85651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[85504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[87342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[86344,86346,86345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008025"},{"annotations":[86955,86956,86954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012080"},{"annotations":[86638,86639,86640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013243"},{"annotations":[85647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[86494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[86024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"},{"annotations":[86519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[85550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060585"},{"annotations":[86635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[86929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[87396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[87400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[87225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[86417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"},{"annotations":[86512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009669"},{"annotations":[86768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009673"},{"annotations":[86374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009672"},{"annotations":[86534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010056"},{"annotations":[87589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[86601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010338"}]},"cv_name":"mondo","definition":"Anterior horn disease is one of a number of medical disorders affecting the anterior horn of the spinal cord. Anterior horn diseases include spinal muscular atrophy, poliomyelitis and amyotrophic lateral sclerosis.","definition_xrefs":["Wikipedia:Anterior_horn_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord disorder","termid":"MONDO:0002545"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00668":null,"SJAG_00754":null,"SJAG_00853":null,"SJAG_01260":null,"SJAG_01317":null,"SJAG_01352":null,"SJAG_01522":null,"SJAG_01537":null,"SJAG_02242":null,"SJAG_02286":null,"SJAG_02289":null,"SJAG_02399":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_02919":null,"SJAG_03170":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03495":null,"SJAG_03598":null,"SJAG_03815":null,"SJAG_03894":null,"SJAG_03923":null,"SJAG_04084":null,"SJAG_04178":null,"SJAG_04321":null,"SJAG_04387":null,"SJAG_04489":null,"SJAG_04567":null,"SJAG_04907":null,"SJAG_05289":null,"SJAG_07000":null},"genotype_count":0,"is_obsolete":false,"name":"anterior horn disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:85672005","UMLS:C0154681","ICD9:335","DOID:4873","MESH:D016472","ICD9:335.9","MEDGEN:102314"],"synonyms":[{"name":"disease of ventral horn of spinal cord","type":"exact"},{"name":"disease or disorder of ventral horn of spinal cord","type":"exact"},{"name":"disorder of ventral horn of spinal cord","type":"exact"},{"name":"ventral horn of spinal cord disease","type":"exact"},{"name":"ventral horn of spinal cord disease or disorder","type":"exact"}],"termid":"MONDO:0003182","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008025":null,"MONDO:0008026":null,"MONDO:0008453":null,"MONDO:0008458":null,"MONDO:0009669":null,"MONDO:0009672":null,"MONDO:0009673":null,"MONDO:0010043":null,"MONDO:0010056":null,"MONDO:0010190":null,"MONDO:0010338":null,"MONDO:0010459":null,"MONDO:0010532":null,"MONDO:0010936":null,"MONDO:0011223":null,"MONDO:0011436":null,"MONDO:0011585":null,"MONDO:0011879":null,"MONDO:0012077":null,"MONDO:0012080":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0012945":null,"MONDO:0013243":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0013853":null,"MONDO:0013884":null,"MONDO:0014485":null,"MONDO:0014531":null,"MONDO:0014874":null,"MONDO:0015353":null,"MONDO:0030860":null,"MONDO:0060585":null,"MONDO:0859529":null},"xrefs":{"Monarch":{"xref_id":"0003182"}}}


id: GO:0048473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-methionine is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["PMID:12169620","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"methionine transport","termid":"GO:0015821"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"D-methionine transmembrane transport","termid":"GO:0048473"}


id: GO:2000270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of fibroblast apoptotic process","termid":"GO:2000269"},{"relation_name":"negatively_regulates","term_name":"fibroblast apoptotic process","termid":"GO:0044346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast apoptotic process","synonyms":[{"name":"negative regulation of fibroblast apoptosis","type":"narrow"}],"termid":"GO:2000270"}


id: PBO:0073730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLBP divergent transcript","termid":"PBO:0073730"}


id: GO:0018545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of a nitrate group to an amino or hydroxylamino group on toluene or a toluene derivative.","definition_xrefs":["UM-BBD_enzymeID:e0346"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)H nitroreductase activity (obsolete GO:0018545)","termid":"GO:0018545"}


id: FYPO:0003968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that has a larger diameter and volume than normal, then initiates growth from the opposite end of the spore body, and does not go on to form a viable dividing cell. The cell may undergo one or two rounds of nuclear division, but does not undergo cytokinesis.","definition_xrefs":["PMID:9105045","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with swollen elongated germ tube","termid":"FYPO:0002911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with swollen elongated germ tube and bidirectional cell growth from spore body","synonyms":[{"name":"inviable after spore germination, without cell division, with swollen elongated cell and bidirectional cell growth from spore body","type":"exact"},{"name":"lethal after spore germination, without cell division, with swollen elongated germ tube and bidirectional cell growth from spore body","type":"exact"}],"termid":"FYPO:0003968"}


id: PBO:0066485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 2","termid":"PBO:0066485"}


id: PR:P87243
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rix1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein rix1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.18","synonyms":[{"name":"Spom972h-rix1","type":"exact"}],"termid":"PR:P87243"}


id: PBO:0113338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; proposed role as basic amino acid permease based on phylogeny; targeted to vacuole via AP-3 pathway; physical interaction with Atg27p suggests possible role in autophagy; non-essential gene","termid":"PBO:0113338"}


id: PBO:0108608
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_detail","termid":"PBO:0108608"}


id: PBO:0080138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VASH1 antisense RNA 1","termid":"PBO:0080138"}


id: PBO:0047375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 6","termid":"PBO:0047375"}


id: PBO:0084575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein required for translocation of Man5GlcNac2-PP-Dol; required for translocation of Man5GlcNac2-PP-Dol from the cytoplasmic side to the lumenal side of the ER membrane but is not the flippase; mutation is suppressed by expression of human p53 protein; essential gene","termid":"PBO:0084575"}


id: GO:0102716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A28 + 2-oxoglutarate + O2 = (2betaOH)-gibberellin28 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A28,oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102716)","termid":"GO:0102716"}


id: PBO:0067618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 790, pseudogene","termid":"PBO:0067618"}


id: MONDO:1012662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in horses due to a mutation in the ACAN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, ACAN-related, horse","secondary_identifiers":["OMIA:001271-9796"],"termid":"MONDO:1012662","xrefs":{"Monarch":{"xref_id":"1012662"}}}


id: PBO:0012843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide-methionine (S)-S-oxide reductase MsrA","termid":"PBO:0012843"}


id: PBO:0028787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_heterochromatin_assembly_at_protein_coding_gene","termid":"PBO:0028787"}


id: PBO:0079292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 10","termid":"PBO:0079292"}


id: PBO:0002841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkyltransferase-like protein Atl1","termid":"PBO:0002841"}


id: PBO:0114486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; strong preference for dsRNA; remodels RNA-protein complex (RNP) to facilitate efficient transcription termination; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites; promotes Mex67p-mediated nuclear export of mRNA by facilitating annealing with antisense RNAs to create dsRNAs","termid":"PBO:0114486"}


id: GO:0141070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a MAPK signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18005697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host MAPK cascade","termid":"GO:0052080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host MAPK cascade","synonyms":[{"name":"disruption of host MAP kinase signaling pathway","type":"exact"},{"name":"disruption of host MAPK signal transduction pathway","type":"exact"},{"name":"disruption of host MAPK signaling pathway","type":"exact"},{"name":"symbiont-mediated suppression of host MAPK signal transduction pathway","type":"exact"}],"termid":"GO:0141070"}


id: PBO:0026803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026803"}


id: PBO:0070795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 25","termid":"PBO:0070795"}


id: PBO:0071412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 18","termid":"PBO:0071412"}


id: PBO:0029279
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_telophase","termid":"PBO:0029279"}


id: PBO:0078262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 1-1","termid":"PBO:0078262"}


id: MONDO:0054708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"retinal ciliopathy","termid":"MONDO:0022410"},{"relation_name":"is_a","term_name":"IFT140-related recessive ciliopathy","termid":"MONDO:0100509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 80","secondary_identifiers":["OMIM:617781","GARD:16252","UMLS:C4540439","MEDGEN:1619674"],"synonyms":[{"name":"RETINITIS pigmentosa 80","type":"related"},{"name":"RP80","type":"related"}],"termid":"MONDO:0054708","xrefs":{"Monarch":{"xref_id":"0054708"}}}


id: MONDO:0700274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the RAD51D gene. Pathogenic germline variation in RAD51D confers an autosomal dominant predisposition to tumor formation at multiple primary sites, including ovarian cancer, triple negative breast cancer and ER negative breast cancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51D-related cancer predisposition","termid":"MONDO:0700274","xrefs":{"Monarch":{"xref_id":"0700274"}}}


id: GO:0032297
data:
  {"annotated_genes":["SJAG_03048","SJAG_02162","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102688,98096,109218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of initiation of DNA-dependent DNA replication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication initiation","termid":"GO:0030174"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"DNA replication initiation","termid":"GO:0006270"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_02162":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"negative regulation of DNA-templated DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA replication initiation","type":"exact"},{"name":"down-regulation of DNA replication initiation","type":"exact"},{"name":"downregulation of DNA replication initiation","type":"exact"},{"name":"inhibition of DNA replication initiation","type":"narrow"},{"name":"negative regulation of DNA replication initiation","type":"broad"},{"name":"negative regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"GO:0032297","terms_by_termid":{"GO:1903467":null}}


id: PBO:0058587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6720","termid":"PBO:0058587"}


id: MONDO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of lung inflammation resulting from the aspiration of food, liquid, or gastric contents into the upper respiratory tract.","definition_xrefs":["MESH:D011015"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspiration pneumonia","secondary_identifiers":["SCTID:422588002","MEDGEN:10814","UMLS:C0032290","DOID:0050152","HP:0011951"],"synonyms":[{"name":"Mendelson syndrome","type":"exact"},{"name":"Mendelson's syndrome","type":"exact"},{"name":"Mendelsons syndrome","type":"exact"},{"name":"Pneumonias, aspiration","type":"exact"},{"name":"acid aspiration syndrome","type":"exact"},{"name":"acid aspiration syndromes","type":"exact"},{"name":"aspiration Pneumonias","type":"exact"},{"name":"aspiration pneumonia","type":"exact"},{"name":"aspiration pneumonia (disease)","type":"exact"},{"name":"gastric acid aspiration syndrome","type":"exact"},{"name":"inhalation pneumonia","type":"related"},{"name":"syndrome, Mendelson","type":"exact"},{"name":"syndrome, Mendelson's","type":"exact"},{"name":"syndrome, acid aspiration","type":"exact"},{"name":"syndromes, acid aspiration","type":"exact"}],"termid":"MONDO:0000265","xrefs":{"Monarch":{"xref_id":"0000265"}}}


id: PBO:0056236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI2 antisense RNA 3","termid":"PBO:0056236"}


id: PBO:0080630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 77","termid":"PBO:0080630"}


id: PBO:0049266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin E","termid":"PBO:0049266"}


id: GO:0048889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast support cell differentiation","termid":"GO:0048889"}


id: PBO:0076710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 12","termid":"PBO:0076710"}


id: CHEBI:46345
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A nucleobase analogue that is uracil in which the hydrogen at position 5 is replaced by fluorine. It is an antineoplastic agent which acts as an antimetabolite - following conversion to the active deoxynucleotide, it inhibits DNA synthesis (by blocking the conversion of deoxyuridylic acid to thymidylic acid by the cellular enzyme thymidylate synthetase) and so slows tumour growth.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-fluorouracil","termid":"CHEBI:46345"}


id: PATO:0000892
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female fertility quality inhering in a female by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"PATO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female sterile","synonyms":[{"name":"female infertile","type":"related"}],"termid":"PATO:0000892"}


id: PBO:0080826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAE1 divergent transcript","termid":"PBO:0080826"}


id: FYPO:0005694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules occurs to a lower extent than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule nucleation during vegetative growth","termid":"FYPO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"decreased interphase microtubule nucleation","synonyms":[{"name":"decreased cytoplasmic microtubule nucleation during mitotic interphase","type":"exact"},{"name":"decreased interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"decreased interphase microtubule nucleation during vegetative growth","type":"exact"},{"name":"decreased microtubule nucleation during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased microtubule nucleation during mitotic interphase","type":"exact"},{"name":"reduced interphase microtubule nucleation","type":"exact"}],"termid":"FYPO:0005694"}


id: MONDO:0019066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Brachydactyly ('short digits') is a general term that refers to disproportionately short fingers and toes, and forms part of the group of limb malformations characterized by bone dysostosis.","definition_xrefs":["Orphanet:69028"],"gene_count":0,"genotype_count":0,"name":"obsolete syndrome with brachydactyly (obsolete MONDO:0019066)","synonyms":[{"name":"dysostosis with brachydactyly","type":"related"}],"termid":"MONDO:0019066","xrefs":{"Monarch":{"xref_id":"0019066"}}}


id: PBO:0058781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7150","termid":"PBO:0058781"}


id: MONDO:0013739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chilblain lupus in which the cause of the disease is a mutation in the SAMHD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial chilblain lupus","termid":"MONDO:0018827"},{"relation_name":"is_a","term_name":"SAMHD1-related type 1 interferonopathy","termid":"MONDO:0700260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"chilblain lupus 2","secondary_identifiers":["MEDGEN:482351","OMIM:614415","GARD:18494","UMLS:C3280721"],"synonyms":[{"name":"CHBL2","type":"related"},{"name":"Chilblain lupus type 2","type":"exact"},{"name":"SAMHD1 chilblain lupus","type":"exact"},{"name":"chilblain lupus 2","type":"exact"},{"name":"chilblain lupus caused by mutation in SAMHD1","type":"exact"}],"termid":"MONDO:0013739","xrefs":{"Monarch":{"xref_id":"0013739"}}}


id: PR:O94261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.12c","synonyms":[{"name":"Spom972h-fta3","type":"exact"},{"name":"sim4 complex subunit fta3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94261"}


id: GO:0048319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the axial mesoderm are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm morphogenesis","termid":"GO:0048332"},{"relation_name":"part_of","term_name":"axial mesoderm development","termid":"GO:0048318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm morphogenesis","termid":"GO:0048319"}


id: FYPO:0006822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and elongates at a normal rate, but divides when a shorter time than normal has elapsed since the previous cell division. Daughter cells therefore have an abnormally low volume. Note that these small viable cells result from a cell cycle size regulation defect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"premature mitosis","termid":"FYPO:0001046"},{"relation_name":"has_part","term_name":"normal vegetative cell growth rate","termid":"FYPO:0006819"},{"relation_name":"is_a","term_name":"viable small vegetative cell","termid":"FYPO:0000648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0000631","FYPO:0001985","FYPO:0000257","FYPO:0000337","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"viable small vegetative cell with normal cell growth rate","synonyms":[{"name":"mitosis with small cell size and normal cell growth rate","type":"related"},{"name":"reduced size at cell division with normal cell growth rate","type":"related"},{"name":"small viable vegetative cell with normal cell growth rate","type":"exact"},{"name":"viable small cell with normal cell growth rate during vegetative growth","type":"exact"},{"name":"viable small vegetative cell with normal cell growth rate","type":"broad"},{"name":"viable small vegetative cell with normal cell growth rate during mitotic cell cycle","type":"related"},{"name":"viable small vegetative cell with premature mitosis","type":"exact"},{"name":"wee","type":"exact"}],"termid":"FYPO:0006822"}


id: RO:HOM0000009
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homoplasy that involves phenotypes similar to those seen in ancestors within the lineage.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homoplasy_relationship_with","termid":"RO:HOM0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_reversal_relationship_with","synonyms":[{"name":"atavism","type":"exact"},{"name":"reversion","type":"related"},{"name":"rudiment","type":"exact"}],"termid":"RO:HOM0000009"}


id: PBO:0075790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 10 pseudogene 1","termid":"PBO:0075790"}


id: GO:1900387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cell-cell adhesion.","definition_xrefs":["GOC:TermGenie","PMID:15737616","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900387)","termid":"GO:1900387"}


id: SO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a cyanelle.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_chromosome","synonyms":[{"name":"cyanelle chromosome","type":"exact"}],"termid":"SO:0000822"}


id: MONDO:0009010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortic arch interruption is a rare heart defect characterized by complete lack of anatomical continuity between the transverse aortic arch and the descending thoracic aorta. AAI should be distinguished anatomically from atresia of the aortic arch where continuity between these segments is achieved by an imperforate fibrous strand of various lengths.","definition_xrefs":["Orphanet:2299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic arch interruption","secondary_identifiers":["ICD10CM:Q25.21","NANDO:2200288","UMLS:C0152419","GARD:740","MEDGEN:57773","ICD9:745.11","icd11.foundation:1769930414","MedDRA:10022599"],"termid":"MONDO:0009010","xrefs":{"Monarch":{"xref_id":"0009010"}}}


id: PBO:0027577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth","termid":"PBO:0027577"}


id: GO:0018450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: myrtenol + O2 + 2 H+ + 2 e- = 2 H2O + myrtenal.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete myrtenol dehydrogenase activity (obsolete GO:0018450)","termid":"GO:0018450"}


id: PBO:0030076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_arginine_import","termid":"PBO:0030076"}


id: PR:O14136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein PEX13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR19332:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein pex13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.10","secondary_identifiers":["UniProtKB:O14136"],"synonyms":[{"name":"SPAC3C7.10","type":"related"},{"name":"Spom972h-PEX13","type":"exact"},{"name":"peroxin-13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14136"}


id: GO:0031910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stable, specialized structure for the ingestion of food by the cell into phagosomes.","definition_xrefs":["PMID:10503189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cytostome","secondary_identifiers":["Wikipedia:Cytostome"],"termid":"GO:0031910"}


id: GO:0032021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of five proteins, designated NELF-A, -B, -C, -D, and -E in human, that can physically associate with RNP polymerase II to induce transcriptional pausing.","definition_xrefs":["PMID:12612062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005654","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NELF complex","synonyms":[{"name":"negative elongation factor complex","type":"exact"}],"termid":"GO:0032021"}


id: PBO:0077081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOPBP1 interacting checkpoint and replication regulator","termid":"PBO:0077081"}


id: PBO:0069001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 245, pseudogene","termid":"PBO:0069001"}


id: MONDO:0015832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"True unicornuate uterus is a rare, non-syndromic uterovaginal malformation characterized by a crescent-shaped, small-sized uterus containing a single horn and fallopian tube with no rudimentary horn. Urinary tract anomalies are frequently associated.","definition_xrefs":["Orphanet:180074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral aplasia of the mullerian ducts","termid":"MONDO:0015831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"true unicornuate uterus","secondary_identifiers":["icd11.foundation:113532659","UMLS:C5848180","GARD:20174","MEDGEN:1863468"],"synonyms":[{"name":"complete unilateral Mullerian aplasia","type":"exact"},{"name":"complete unilateral Müllerian aplasia","type":"exact"},{"name":"complete unilateral aplasia of the Mullerian ducts","type":"exact"},{"name":"complete unilateral aplasia of the Müllerian ducts","type":"exact"},{"name":"unicornuate uterus without rudimentary horn","type":"exact"}],"termid":"MONDO:0015832","xrefs":{"Monarch":{"xref_id":"0015832"}}}


id: GO:0052524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the salicylic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont salicylic acid-mediated defense response (obsolete GO:0052524)","synonyms":[{"name":"induction by organism of symbiont SA-mediated defense response","type":"narrow"},{"name":"induction by organism of symbiont salicylic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of symbiont SA-mediated defense response","type":"exact"},{"name":"positive regulation by organism of symbiont salicylic acid-mediated defense response","type":"exact"}],"termid":"GO:0052524"}


id: FYPO:0005429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UV-damage excision repair occurs to a lower extent than normal during G2 phase of the mitotic cell cycle. UV-damage excision repair is a DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site, and that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PomBase:mah","GO:0070914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased UV-damage excision repair","termid":"FYPO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0000298","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased UV-damage excision repair during mitotic G2 phase","synonyms":[{"name":"decreased UV-damage excision repair during G2 phase of mitotic cell cycle","type":"related"},{"name":"decreased UV-damage excision repair during mitotic G2 during vegetative growth","type":"exact"},{"name":"reduced UV-damage excision repair during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0005429"}


id: GO:0009891
data:
  {"annotated_genes":["SJAG_02458","SJAG_01622","SJAG_01513","SJAG_02252","SJAG_01113","SJAG_02391","SJAG_03735","SJAG_02057","SJAG_04596","SJAG_01740","SJAG_03752","SJAG_02170","SJAG_00743","SJAG_02773","SJAG_00904","SJAG_07011","SJAG_00210","SJAG_00045","SJAG_02906","SJAG_03126","SJAG_01047","SJAG_02329","SJAG_03839","SJAG_02385","SJAG_01653","SJAG_01694","SJAG_00150","SJAG_03366","SJAG_04989","SJAG_00613","SJAG_00873","SJAG_03441","SJAG_03944","SJAG_02138","SJAG_01213","SJAG_02018","SJAG_02723","SJAG_02573","SJAG_01151","SJAG_01111","SJAG_03897","SJAG_00698","SJAG_05153","SJAG_04005","SJAG_04205","SJAG_04946","SJAG_01325","SJAG_00581","SJAG_03787","SJAG_01016","SJAG_00163","SJAG_02048","SJAG_00342","SJAG_01403","SJAG_02730","SJAG_02466","SJAG_01778","SJAG_01249","SJAG_02589","SJAG_03346","SJAG_03183","SJAG_04705","SJAG_02571","SJAG_03579","SJAG_00735","SJAG_01938","SJAG_06576","SJAG_01764","SJAG_03283","SJAG_02613","SJAG_02326","SJAG_02849","SJAG_01230","SJAG_01243","SJAG_04712","SJAG_01040","SJAG_04388","SJAG_00746","SJAG_04666","SJAG_03758","SJAG_05341","SJAG_03255","SJAG_00297","SJAG_00909","SJAG_00739","SJAG_00269","SJAG_00868","SJAG_00087","SJAG_03421","SJAG_03599","SJAG_05313","SJAG_02494","SJAG_03067","SJAG_02314","SJAG_04206","SJAG_02810","SJAG_02671","SJAG_01199","SJAG_03241","SJAG_01919","SJAG_02311","SJAG_02541","SJAG_00156","SJAG_03696","SJAG_00996","SJAG_04092","SJAG_04749","SJAG_01771","SJAG_04855","SJAG_00987","SJAG_03118","SJAG_03289","SJAG_04194","SJAG_02608","SJAG_00769","SJAG_00797","SJAG_01805","SJAG_05203","SJAG_04018","SJAG_00164","SJAG_03776","SJAG_00792","SJAG_03573","SJAG_02592","SJAG_04191","SJAG_01804","SJAG_03033","SJAG_02058","SJAG_02709","SJAG_04038","SJAG_00440","SJAG_04249","SJAG_04611","SJAG_02303","SJAG_02956","SJAG_01672","SJAG_01062","SJAG_01711","SJAG_01583","SJAG_03622","SJAG_01916","SJAG_04551","SJAG_05343","SJAG_02066","SJAG_00584","SJAG_03519","SJAG_03590","SJAG_01517","SJAG_02218","SJAG_02698","SJAG_03431","SJAG_03981","SJAG_02798","SJAG_04036","SJAG_01475","SJAG_01307","SJAG_04839","SJAG_01441","SJAG_02189","SJAG_02549","SJAG_05020","SJAG_03279","SJAG_03967","SJAG_02872","SJAG_01149","SJAG_02981","SJAG_02370","SJAG_03501","SJAG_04576","SJAG_03668","SJAG_03694","SJAG_02927","SJAG_04755","SJAG_05288","SJAG_04647","SJAG_03145","SJAG_01878","SJAG_03061","SJAG_00802","SJAG_04613","SJAG_00896","SJAG_01611","SJAG_02406","SJAG_04369","SJAG_01150","SJAG_04813","SJAG_01465","SJAG_02551","SJAG_01658","SJAG_02812","SJAG_00266","SJAG_02474","SJAG_03484","SJAG_02043","SJAG_04435","SJAG_00441","SJAG_02869","SJAG_02500","SJAG_03883","SJAG_00641","SJAG_02447","SJAG_00349","SJAG_05187","SJAG_04274","SJAG_03143","SJAG_03884","SJAG_04820","SJAG_05265","SJAG_01436","SJAG_02255","SJAG_04771","SJAG_00822","SJAG_00973","SJAG_00693","SJAG_02254","SJAG_02846","SJAG_02196","SJAG_00766","SJAG_04099","SJAG_01193","SJAG_04758","SJAG_04213","SJAG_04097","SJAG_02472","SJAG_04825","SJAG_03538","SJAG_06638","SJAG_04421","SJAG_02768","SJAG_03576","SJAG_03550","SJAG_02938","SJAG_02415","SJAG_00184","SJAG_01110","SJAG_05192","SJAG_03879","SJAG_05247","SJAG_06599","SJAG_04009","SJAG_01952"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79123,90516,100418,79060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[89809,71022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[90109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[91993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"},{"annotations":[77609,106978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[108813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[117862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[106980,70112,117459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[80099,70620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[110176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[89844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010628"},{"annotations":[113004,99027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[100783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[118744,89798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[74413,111257,75671,92484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[88775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903931"},{"annotations":[87833,92744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[89785,88278,93820,106984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[90032,79898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[112296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[114013,89360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[76381,79867,78866,78286,73506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[103488,71798,102547,112625,75239,71165,73289,69033,119425,98739,97846,97847,70617,94037,73746,78926,103017,76233,116606,112080,109368,108958,115163,79825,69773,63385,74182,76558,118564,79429,93077,99824,75169,69565,78387,102594,67808,61273,72467,117701,77742,71716,112209,109131,63113,108785,111052,110013,75977,94133,79940,117316,95852,70713,107733,80185,65540,74145,97844,97249,97845,76139,72234,95408,99616,62163,71120,98899,107895,97848,94697,108291,108899,116796,119426,100812,68912,80096,87731,77088,66653,73761,102467,77778,104761,97614,96013,72823,100823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045944"},{"annotations":[71338,79909,71883,106373,117325,78404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[106698,90691,115627,95705,98997,94773,102276,109046,103735,87768,115064,106374,106563,94662,99346,109073,96185,91004,119264,106021,103993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"},{"annotations":[68825,66588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[73117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[76811,66589,68826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"},{"annotations":[89513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"},{"annotations":[103686,98145,89198,108000,109390,104166,98824,109669,113650,95772,115586,117235,117781,114728,103100,94534,90915,114552,107075,101298,115718,90391,88121,112082,96215,96208,114637,116677,94458,98559,113461,107227,92619,115342,117600,113480,88663,88813,107649,109793,94506,90119,96974,107762,110938,114563,116866,115732,116616,94478,93120,94444,91735,94631,117874,94334,88479,87973,91034,94104,96771,97409,95797,103439,108198,108786,109901,112882,91020,101882,106099,117896,116034,105358,118295,99713,93839,104888,110803,94966,113306,98990,115050,89433,88302,105950,89605,99463,105350,117944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"positively_regulates","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":241,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00087":null,"SJAG_00150":null,"SJAG_00156":null,"SJAG_00163":null,"SJAG_00164":null,"SJAG_00184":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00269":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00349":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00613":null,"SJAG_00641":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00766":null,"SJAG_00769":null,"SJAG_00792":null,"SJAG_00797":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00973":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01016":null,"SJAG_01040":null,"SJAG_01047":null,"SJAG_01062":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01113":null,"SJAG_01149":null,"SJAG_01150":null,"SJAG_01151":null,"SJAG_01193":null,"SJAG_01199":null,"SJAG_01213":null,"SJAG_01230":null,"SJAG_01243":null,"SJAG_01249":null,"SJAG_01307":null,"SJAG_01325":null,"SJAG_01403":null,"SJAG_01436":null,"SJAG_01441":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01517":null,"SJAG_01583":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01672":null,"SJAG_01694":null,"SJAG_01711":null,"SJAG_01740":null,"SJAG_01764":null,"SJAG_01771":null,"SJAG_01778":null,"SJAG_01804":null,"SJAG_01805":null,"SJAG_01878":null,"SJAG_01916":null,"SJAG_01919":null,"SJAG_01938":null,"SJAG_01952":null,"SJAG_02018":null,"SJAG_02043":null,"SJAG_02048":null,"SJAG_02057":null,"SJAG_02058":null,"SJAG_02066":null,"SJAG_02138":null,"SJAG_02170":null,"SJAG_02189":null,"SJAG_02196":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02254":null,"SJAG_02255":null,"SJAG_02303":null,"SJAG_02311":null,"SJAG_02314":null,"SJAG_02326":null,"SJAG_02329":null,"SJAG_02370":null,"SJAG_02385":null,"SJAG_02391":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02472":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02551":null,"SJAG_02571":null,"SJAG_02573":null,"SJAG_02589":null,"SJAG_02592":null,"SJAG_02608":null,"SJAG_02613":null,"SJAG_02671":null,"SJAG_02698":null,"SJAG_02709":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02810":null,"SJAG_02812":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_02981":null,"SJAG_03033":null,"SJAG_03061":null,"SJAG_03067":null,"SJAG_03118":null,"SJAG_03126":null,"SJAG_03143":null,"SJAG_03145":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03255":null,"SJAG_03279":null,"SJAG_03283":null,"SJAG_03289":null,"SJAG_03346":null,"SJAG_03366":null,"SJAG_03421":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03484":null,"SJAG_03501":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03550":null,"SJAG_03573":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03590":null,"SJAG_03599":null,"SJAG_03622":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03696":null,"SJAG_03735":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03879":null,"SJAG_03883":null,"SJAG_03884":null,"SJAG_03897":null,"SJAG_03944":null,"SJAG_03967":null,"SJAG_03981":null,"SJAG_04005":null,"SJAG_04009":null,"SJAG_04018":null,"SJAG_04036":null,"SJAG_04038":null,"SJAG_04092":null,"SJAG_04097":null,"SJAG_04099":null,"SJAG_04191":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04206":null,"SJAG_04213":null,"SJAG_04249":null,"SJAG_04274":null,"SJAG_04369":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04435":null,"SJAG_04551":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04611":null,"SJAG_04613":null,"SJAG_04647":null,"SJAG_04666":null,"SJAG_04705":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04771":null,"SJAG_04813":null,"SJAG_04820":null,"SJAG_04825":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_04946":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05153":null,"SJAG_05187":null,"SJAG_05192":null,"SJAG_05203":null,"SJAG_05247":null,"SJAG_05265":null,"SJAG_05288":null,"SJAG_05313":null,"SJAG_05341":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null,"SJAG_06638":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of biosynthetic process","type":"narrow"},{"name":"positive regulation of anabolism","type":"exact"},{"name":"positive regulation of biosynthesis","type":"exact"},{"name":"positive regulation of formation","type":"exact"},{"name":"positive regulation of synthesis","type":"exact"},{"name":"stimulation of biosynthetic process","type":"narrow"},{"name":"up regulation of biosynthetic process","type":"exact"},{"name":"up-regulation of biosynthetic process","type":"exact"},{"name":"upregulation of biosynthetic process","type":"exact"}],"termid":"GO:0009891","terms_by_termid":{"GO:0010628":null,"GO:0032786":null,"GO:0032968":null,"GO:0045815":null,"GO:0045899":null,"GO:0045901":null,"GO:0045905":null,"GO:0045943":null,"GO:0045944":null,"GO:0045948":null,"GO:0048026":null,"GO:0048255":null,"GO:0060212":null,"GO:0060261":null,"GO:0060906":null,"GO:0060963":null,"GO:0061188":null,"GO:0070131":null,"GO:0070134":null,"GO:0070452":null,"GO:0070935":null,"GO:0090180":null,"GO:0120271":null,"GO:0140748":null,"GO:1902648":null,"GO:1903931":null,"GO:1904595":null,"GO:1904775":null,"GO:1905746":null,"GO:2000767":null}}


id: GO:0106084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of interacting with the spindle pole body and the nuclear envelope, in order to embed the spindle pole body in the nuclear envelope at fusion sites of the inner and outer nuclear membrane.","definition_xrefs":["PMID:28356353","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane microtubule tethering complex","termid":"GO:0106094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic nuclear membrane microtubule tethering complex","synonyms":[{"name":"Mps2-Bbp1-Spc29 complex","type":"related"},{"name":"nuclear membrane mitotic spindle pole body tethering complex","type":"exact"}],"termid":"GO:0106084"}


id: PBO:0087331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin family member; required for the cytoplasm-to-vacuole targeting (Cvt) pathway, endosomal sorting and selective autophagy; has a Phox homology domain that binds phosphatidylinositol-3-phosphate; interacts with Snx4p; potential Cdc28p substrate","termid":"PBO:0087331"}


id: MONDO:0018301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare chronic debilitating urogenital disease characterized by urinary frequency, urgency, and pelvic pain.","definition_xrefs":["Orphanet:37202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"chronic cystitis","termid":"MONDO:0006030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial cystitis","secondary_identifiers":["GARD:18825","DOID:1678","SCTID:111409009","DOID:13949","MESH:D018856","MedDRA:10011796","SCTID:197834003","NANDO:1200743","MEDGEN:129176","MedDRA:10008927","UMLS:C0282488","EFO:0008507","NCIT:C27189","icd11.foundation:1650709285","ICD9:595.1"],"synonyms":[{"name":"IC/BPS","type":"exact"},{"name":"IC/PBS","type":"exact"},{"name":"bladder pain syndrome","type":"exact"},{"name":"chronic interstitial cystitis","type":"exact"},{"name":"interstitial cystitis, chronic","type":"exact"},{"name":"interstitial cystitis/bladder pain syndrome","type":"exact"},{"name":"interstitial cystitis/painful bladder syndrome","type":"exact"},{"name":"painful bladder syndrome","type":"exact"},{"name":"ulcerative cystitis","type":"exact"}],"termid":"MONDO:0018301","xrefs":{"Monarch":{"xref_id":"0018301"}}}


id: SO:0000420
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inverted repeat (SO:0000294) occurring at the 5-prime termini of a DNA transposon.","direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat","termid":"SO:0000481"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_terminal_inverted_repeat","synonyms":[{"name":"5' TIR","type":"exact"},{"name":"five prime terminal inverted repeat","type":"exact"}],"termid":"SO:0000420"}


id: PR:Q9HGM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04074","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ homolog subfamily C member 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.02c","secondary_identifiers":["UniProtKB:Q9HGM9"],"synonyms":[{"name":"Spom972h-DNAJC7","type":"exact"}],"termid":"PR:Q9HGM9"}


id: MONDO:0044797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign melanocytic nevus characterized by the presence of desmoplastic stroma.","definition_xrefs":["NCIT:C4497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign melanocytic skin nevus","termid":"MONDO:0044794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"desmoplastic nevus","secondary_identifiers":["MEDGEN:91083","UMLS:C0346098"],"synonyms":[{"name":"Desmoplastic Nevus","type":"exact"}],"termid":"MONDO:0044797","xrefs":{"Monarch":{"xref_id":"0044797"}}}


id: PR:O14093
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 54 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01639","PANTHER:PTHR12965:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.10","secondary_identifiers":["UniProtKB:O14093"],"synonyms":[{"name":"Spom972h-VPS54","type":"exact"}],"termid":"PR:O14093"}


id: MONDO:0011520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 2","secondary_identifiers":["UMLS:C1854577","OMIM:605218","MEDGEN:343159"],"synonyms":[{"name":"SLEB2","type":"exact"},{"name":"susceptibility to systemic lupus erythematosus 2","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 2","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0011520","xrefs":{"Monarch":{"xref_id":"0011520"}}}


id: PBO:0076376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1 (MAP3K7) binding protein 3","termid":"PBO:0076376"}


id: GO:1990442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to nitrosative stress; a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:23985028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrosative stress","termid":"GO:0071500"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to nitrosative stress","synonyms":[{"name":"nitrosative stress-induced apoptosis","type":"related"},{"name":"nitrosative stress-induced intrinsic apoptotic signaling pathway","type":"exact"}],"termid":"GO:1990442"}


id: PBO:0017489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-never_in_taxon","termid":"PBO:0017489"}


id: PBO:0051428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-7 (pseudogene)","termid":"PBO:0051428"}


id: PBO:0058677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6805","termid":"PBO:0058677"}


id: PBO:0001979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BC10 family protein","termid":"PBO:0001979"}


id: PBO:0113564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex beta subunit, Wbp1","termid":"PBO:0113564"}


id: PBO:0050846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICA1 antisense RNA 1","termid":"PBO:0050846"}


id: MONDO:1012736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any skeletal dysplasia that occurs in dogs due to a mutation in the COL11A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, COL11A2-related, dog","secondary_identifiers":["OMIA:001772-9615"],"synonyms":[{"name":"SD2","type":"exact"},{"name":"skeletal dysplasia 2, COL11A2-related, dog","type":"exact"},{"name":"skeletal dysplasia 2, dog","type":"related"}],"termid":"MONDO:1012736","xrefs":{"Monarch":{"xref_id":"1012736"}}}


id: GO:0043700
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which pteridine pigments are synthesized and stored. Pterinosomes are synthesized in xanthophores and erythrophore cells and are yellow, orange or red in appearance.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"pterinosome","termid":"GO:0043700"}


id: GO:0070858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"regulation of bile acid biosynthetic process","termid":"GO:0070857"},{"relation_name":"is_a","term_name":"negative regulation of bile acid metabolic process","termid":"GO:1904252"},{"relation_name":"negatively_regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of bile acid biosynthetic process","synonyms":[{"name":"down regulation of bile acid biosynthetic process","type":"exact"},{"name":"down-regulation of bile acid biosynthetic process","type":"exact"},{"name":"downregulation of bile acid biosynthetic process","type":"exact"},{"name":"inhibition of bile acid biosynthetic process","type":"narrow"},{"name":"negative regulation of bile acid anabolism","type":"exact"},{"name":"negative regulation of bile acid biosynthesis","type":"exact"},{"name":"negative regulation of bile acid formation","type":"exact"},{"name":"negative regulation of bile acid synthesis","type":"exact"}],"termid":"GO:0070858"}


id: GO:0033286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + ectoine(out/in) = ADP + phosphate + ectoine(in/out).","definition_xrefs":["RHEA:32787","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled monocarboxylic acid transmembrane transporter activity","termid":"GO:0033285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled ectoine transmembrane transporter activity","secondary_identifiers":["GO:0051471"],"synonyms":[{"name":"ATP-dependent ectoine transmembrane transporter activity","type":"exact"},{"name":"ectoine transmembrane transporter activity","type":"broad"},{"name":"ectoine-transporting ATPase activity","type":"exact"}],"termid":"GO:0033286"}


id: MONDO:0001428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pylorospasm","secondary_identifiers":["UMLS:C0152163","ICD9:537.81","DOID:12072","MEDGEN:508908","SCTID:335002"],"termid":"MONDO:0001428","xrefs":{"Monarch":{"xref_id":"0001428"}}}


id: PBO:0073464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFTPD antisense RNA 1","termid":"PBO:0073464"}


id: MONDO:0017363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare, severe, interstitial lung disease of insidious onset with subacute or chronic non-specific respiratory manifestations (dyspnea, cough, wheezing) often associated with systemic manifestations (fatigue, malaise, weight loss).","definition_xrefs":["Orphanet:2902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic eosinophilic pneumonia","termid":"MONDO:0015927"},{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"idiopathic chronic eosinophilic pneumonia","secondary_identifiers":["MESH:C535590","icd11.foundation:958353326","UMLS:C2930941","MEDGEN:443938","GARD:1130","NORD:967"],"synonyms":[{"name":"Carrington syndrome","type":"related"},{"name":"Carrington's disease","type":"related"},{"name":"Carrington's pulmonary eosinophilia","type":"related"},{"name":"Chronic Eosinophilic Pneumonia","type":"exact"},{"name":"chronic eosinophilic pneumonia","type":"broad"},{"name":"chronic eosinophilic pneumonia (CEP)","type":"related"},{"name":"chronic idiopathic eosinophilic pneumonia","type":"related"},{"name":"eosinophilic idiopathic chronic pneumopathy","type":"related"}],"termid":"MONDO:0017363","xrefs":{"Monarch":{"xref_id":"0017363"}}}


id: GO:0014010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell proliferation","termid":"GO:0014010"}


id: PBO:0070496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 31","termid":"PBO:0070496"}


id: GO:0009301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0016073"],"is_obsolete":false,"name":"snRNA transcription","termid":"GO:0009301"}


id: MONDO:0026727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shukla-Vernon syndrome","secondary_identifiers":["GARD:18511","MEDGEN:1674076","OMIM:301029","DOID:0111841","UMLS:C5193146"],"synonyms":[{"name":"SHUKLA-VERNON SYNDROME","type":"related"},{"name":"SHUVER","type":"related"},{"name":"Shukla-Vernon syndrome, X-linked recessive","type":"exact"}],"termid":"MONDO:0026727","xrefs":{"Monarch":{"xref_id":"0026727"}}}


id: PBO:0060615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1B pseudogene","termid":"PBO:0060615"}


id: PBO:0003909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi 2","termid":"PBO:0003909"}


id: PBO:0016049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpp40 (predicted)","termid":"PBO:0016049"}


id: GO:0047031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diethyl (2R,3R)-2-methyl-3-hydroxysuccinate + NADP+ = diethyl 2-methyl-3-oxosuccinate + H+ + NADPH.","definition_xrefs":["RHEA:21008","EC:1.1.1.229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diethyl 2-methyl-3-oxosuccinate reductase activity","secondary_identifiers":["KEGG_REACTION:R04387","MetaCyc:1.1.1.229-RXN"],"synonyms":[{"name":"diethyl-(2R,3R)-2-methyl-3-hydroxysuccinate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047031"}


id: GO:1901956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde dense core granule transport.","definition_xrefs":["GOC:kmv","PMID:23358451","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"regulation of retrograde dense core granule transport","termid":"GO:1901954"},{"relation_name":"is_a","term_name":"positive regulation of dense core granule transport","termid":"GO:1904811"},{"relation_name":"is_a","term_name":"positive regulation of retrograde axon cargo transport","termid":"GO:2001019"},{"relation_name":"positively_regulates","term_name":"retrograde neuronal dense core vesicle transport","termid":"GO:1990049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of retrograde dense core granule transport","synonyms":[{"name":"activation of retrograde dense core granule transport","type":"narrow"},{"name":"up regulation of retrograde dense core granule transport","type":"exact"},{"name":"up-regulation of retrograde dense core granule transport","type":"exact"},{"name":"upregulation of retrograde dense core granule transport","type":"exact"}],"termid":"GO:1901956"}


id: MONDO:0014292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy with mild cerebellar ataxia and white matter edema","secondary_identifiers":["GARD:17565","SCTID:768663003","MEDGEN:1638681","NCIT:C171603","UMLS:C4554120","OMIM:615651","Orphanet:363540"],"synonyms":[{"name":"LKPAT","type":"related"},{"name":"leukoencephalopathy with ataxia","type":"related"}],"termid":"MONDO:0014292","xrefs":{"Monarch":{"xref_id":"0014292"}}}


id: MONDO:0005237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pleomorphic liposarcoma (obsolete MONDO:0005237)","termid":"MONDO:0005237","xrefs":{"Monarch":{"xref_id":"0005237"}}}


id: GO:0004336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosyl-N-acylsphingosine + H2O = D-galactose + N-acylsphingosine.","definition_xrefs":["EC:3.2.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramidase activity","termid":"GO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"galactosylceramidase activity","secondary_identifiers":["Reactome:R-HSA-1606564","RHEA:14297","MetaCyc:GALACTOSYLCERAMIDASE-RXN"],"synonyms":[{"name":"D-galactosyl-N-acylsphingosine galactohydrolase activity","type":"related"},{"name":"beta-galactocerebrosidase activity","type":"related"},{"name":"beta-galactosylceramidase activity","type":"related"},{"name":"ceramide galactosidase activity","type":"related"},{"name":"cerebroside beta-galactosidase activity","type":"related"},{"name":"cerebroside galactosidase activity","type":"related"},{"name":"galactocerebrosidase activity","type":"related"},{"name":"galactocerebroside beta-galactosidase activity","type":"related"},{"name":"galactocerebroside galactosidase activity","type":"related"},{"name":"galactocerebroside-beta-D-galactosidase activity","type":"related"},{"name":"galactosylceramidase I","type":"related"},{"name":"galactosylceramide beta-galactosidase activity","type":"related"},{"name":"galactosylcerebrosidase activity","type":"related"},{"name":"galcerase activity","type":"related"},{"name":"lactosylceramidase I","type":"related"},{"name":"lactosylceramidase activity","type":"related"}],"termid":"GO:0004336"}


id: PBO:0089014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26","termid":"PBO:0089014"}


id: MONDO:1010068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Situs inversus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus, non-human animal","secondary_identifiers":["OMIA:001102"],"termid":"MONDO:1010068","xrefs":{"Monarch":{"xref_id":"1010068"}}}


id: SO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Y RNAs are components of the Ro ribonucleoprotein particle (Ro RNP), in association with Ro60 and La proteins. The Y RNAs and Ro60 and La proteins are well conserved, but the function of the Ro RNP is not known. In humans the RNA component can be one of four small RNAs: hY1, hY3, hY4 and hY5. These small RNAs are predicted to fold into a conserved secondary structure containing three stem structures. The largest of the four, hY1, contains an additional hairpin.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Y_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:Y_RNA","type":"exact"},{"name":"Y RNA","type":"exact"}],"termid":"SO:0000405"}


id: GO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic digestion of components in the acrosomal matrix that occurs as part of the acrosome reaction. The process can occur either in the cumulus oophorous facilitating the penetration of it by the sperm, or at the zona pellucida allowing the sperm to reach the plasma membrane of the egg where the inner acrosomal membrane of the sperm can interact with the egg plasma membrane.","definition_xrefs":["PMID:3886029","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"},{"relation_name":"part_of","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"acrosome matrix dispersal","termid":"GO:0002077"}


id: GO:0060421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organ growth","termid":"GO:0046622"},{"relation_name":"is_a","term_name":"regulation of heart growth","termid":"GO:0060420"},{"relation_name":"positively_regulates","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart growth","termid":"GO:0060421"}


id: FYPO:0003924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage measured at arrested replication forks in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage at stalled replication fork","synonyms":[{"name":"increased DNA damage at arrested replication fork","type":"exact"},{"name":"increased DNA damage at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"increased DNA damage at stalled replication fork during vegetative growth","type":"exact"},{"name":"increased number of DNA lesions at stalled replication forks during vegetative growth","type":"related"}],"termid":"FYPO:0003924"}


id: PBO:0116977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK5 antisense RNA 1","termid":"PBO:0116977"}


id: PBO:0012291
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YOR341W","termid":"PBO:0012291"}


id: PBO:0089273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic P body 3'-5'-exoribonuclease, Dis3L2-related","termid":"PBO:0089273"}


id: PATO:0001161
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration which relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diluted","termid":"PATO:0001161"}


id: PBO:0073633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 18, pseudogene","termid":"PBO:0073633"}


id: GO:0045302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholan-24-oylglycine + H2O = 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholanate + glycine.","definition_xrefs":["EC:3.5.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"choloylglycine hydrolase activity","secondary_identifiers":["RHEA:19353","MetaCyc:CHOLOYLGLYCINE-HYDROLASE-RXN"],"synonyms":[{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholan-24-oylglycine amidohydrolase activity","type":"related"},{"name":"bile salt hydrolase activity","type":"related"},{"name":"choloyltaurine hydrolase activity","type":"related"},{"name":"glycocholase activity","type":"related"}],"termid":"GO:0045302"}


id: GO:1901804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucoside.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:16390337","PMID:8990303","Unipathway:UPA00237","PMID:15205427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-glucoside metabolic process","synonyms":[{"name":"beta-glucoside metabolism","type":"exact"}],"termid":"GO:1901804"}


id: PBO:0029852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0029852"}


id: PBO:0069158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 410, pseudogene","termid":"PBO:0069158"}


id: PBO:0029608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell","termid":"PBO:0029608"}


id: MONDO:0006060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the nasopharynx.","direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasopharyngeal squamous cell carcinoma","secondary_identifiers":["EFO:1000058","MESH:C538339","NCIT:C167265","MEDGEN:76017","UMLS:C0279698","NCIT:C3871"],"termid":"MONDO:0006060","xrefs":{"Monarch":{"xref_id":"0006060"}}}


id: MONDO:0800387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to sulfur mustard. The effects of mustard poisoning may be local, systemic, or both, depending on environmental conditions, exposed organs, and the extent and duration of exposure. The toxic effects of mustard include inhibition of mitosis, NAD depletion, decreased tissue respiration and finally cell death.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur mustard poisoning","synonyms":[{"name":"mustard agent poisoning","type":"exact"},{"name":"mustard gas poisoning","type":"exact"}],"termid":"MONDO:0800387","xrefs":{"Monarch":{"xref_id":"0800387"}}}


id: GO:1902948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tau-protein kinase activity.","definition_xrefs":["PMID:22986780","GO_REF:0000059","GOC:TermGenie","PMID:15897157","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"},{"relation_name":"is_a","term_name":"regulation of tau-protein kinase activity","termid":"GO:1902947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tau-protein kinase activity","synonyms":[{"name":"down regulation of CDK5/p23","type":"related"},{"name":"down regulation of GSK","type":"related"},{"name":"down regulation of STK31","type":"related"},{"name":"down regulation of TPK","type":"related"},{"name":"down regulation of TPK I","type":"related"},{"name":"down regulation of TPK II","type":"related"},{"name":"down regulation of TTK","type":"related"},{"name":"down regulation of [Tau protein] kinase activity","type":"exact"},{"name":"down regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"down regulation of cdk5/p20","type":"related"},{"name":"down regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"down regulation of protein tau kinase activity","type":"exact"},{"name":"down regulation of tau kinase activity","type":"exact"},{"name":"down regulation of tau protein kinase activity","type":"exact"},{"name":"down regulation of tau-protein kinase I activity","type":"narrow"},{"name":"down regulation of tau-protein kinase II activity","type":"narrow"},{"name":"down regulation of tau-protein kinase activity","type":"exact"},{"name":"down regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"down-regulation of CDK5/p23","type":"related"},{"name":"down-regulation of GSK","type":"related"},{"name":"down-regulation of STK31","type":"related"},{"name":"down-regulation of TPK","type":"related"},{"name":"down-regulation of TPK I","type":"related"},{"name":"down-regulation of TPK II","type":"related"},{"name":"down-regulation of TTK","type":"related"},{"name":"down-regulation of [Tau protein] kinase activity","type":"exact"},{"name":"down-regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"down-regulation of cdk5/p20","type":"related"},{"name":"down-regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"down-regulation of protein tau kinase activity","type":"exact"},{"name":"down-regulation of tau kinase activity","type":"exact"},{"name":"down-regulation of tau protein kinase activity","type":"exact"},{"name":"down-regulation of tau-protein kinase I activity","type":"narrow"},{"name":"down-regulation of tau-protein kinase II activity","type":"narrow"},{"name":"down-regulation of tau-protein kinase activity","type":"exact"},{"name":"down-regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"downregulation of CDK5/p23","type":"related"},{"name":"downregulation of GSK","type":"related"},{"name":"downregulation of STK31","type":"related"},{"name":"downregulation of TPK","type":"related"},{"name":"downregulation of TPK I","type":"related"},{"name":"downregulation of TPK II","type":"related"},{"name":"downregulation of TTK","type":"related"},{"name":"downregulation of [Tau protein] kinase activity","type":"exact"},{"name":"downregulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"downregulation of cdk5/p20","type":"related"},{"name":"downregulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"downregulation of protein tau kinase activity","type":"exact"},{"name":"downregulation of tau kinase activity","type":"exact"},{"name":"downregulation of tau protein kinase activity","type":"exact"},{"name":"downregulation of tau-protein kinase I activity","type":"narrow"},{"name":"downregulation of tau-protein kinase II activity","type":"narrow"},{"name":"downregulation of tau-protein kinase activity","type":"exact"},{"name":"downregulation of tau-tubulin kinase activity","type":"narrow"},{"name":"inhibition of CDK5/p23","type":"related"},{"name":"inhibition of GSK","type":"related"},{"name":"inhibition of STK31","type":"related"},{"name":"inhibition of TPK","type":"related"},{"name":"inhibition of TPK I","type":"related"},{"name":"inhibition of TPK II","type":"related"},{"name":"inhibition of TTK","type":"related"},{"name":"inhibition of [Tau protein] kinase activity","type":"narrow"},{"name":"inhibition of brain protein kinase PK40erk activity","type":"narrow"},{"name":"inhibition of cdk5/p20","type":"related"},{"name":"inhibition of glycogen synthase kinase-3beta activity","type":"narrow"},{"name":"inhibition of protein tau kinase activity","type":"narrow"},{"name":"inhibition of tau kinase activity","type":"narrow"},{"name":"inhibition of tau protein kinase activity","type":"narrow"},{"name":"inhibition of tau-protein kinase I activity","type":"narrow"},{"name":"inhibition of tau-protein kinase II activity","type":"narrow"},{"name":"inhibition of tau-protein kinase activity","type":"narrow"},{"name":"inhibition of tau-tubulin kinase activity","type":"narrow"},{"name":"negative regulation of CDK5/p23","type":"related"},{"name":"negative regulation of GSK","type":"related"},{"name":"negative regulation of STK31","type":"related"},{"name":"negative regulation of TPK","type":"related"},{"name":"negative regulation of TPK I","type":"related"},{"name":"negative regulation of TPK II","type":"related"},{"name":"negative regulation of TTK","type":"related"},{"name":"negative regulation of [Tau protein] kinase activity","type":"exact"},{"name":"negative regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"negative regulation of cdk5/p20","type":"related"},{"name":"negative regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"negative regulation of protein tau kinase activity","type":"exact"},{"name":"negative regulation of tau kinase activity","type":"exact"},{"name":"negative regulation of tau protein kinase activity","type":"exact"},{"name":"negative regulation of tau-protein kinase I activity","type":"narrow"},{"name":"negative regulation of tau-protein kinase II activity","type":"narrow"},{"name":"negative regulation of tau-tubulin kinase activity","type":"narrow"}],"termid":"GO:1902948"}


id: GO:1902604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of N-(4-aminobenzoyl)-L-glutamate across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"p-aminobenzoyl-glutamate transport","termid":"GO:0015814"},{"relation_name":"is_a","term_name":"dipeptide transmembrane transport","termid":"GO:0035442"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"p-aminobenzoyl-glutamate transmembrane transport","synonyms":[{"name":"N-(4-aminobenzoyl)-L-glutamate transmembrane transport","type":"exact"}],"termid":"GO:1902604"}


id: PBO:0075559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG7 matrix AAA peptidase subunit, paraplegin","termid":"PBO:0075559"}


id: PATO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000697 relative texture value (obsolete PATO:0000697)","termid":"PATO:0000697"}


id: GO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(5-deoxy-D-ribos-5-yl)-L-homocysteine = (S)-4,5-dihydroxypentane-2,3-dione + L-homocysteine.","definition_xrefs":["RHEA:17753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"S-ribosylhomocysteine lyase activity","secondary_identifiers":["GO:0019138","EC:4.4.1.21","MetaCyc:RIBOSYLHOMOCYSTEINASE-RXN","KEGG_REACTION:R01291"],"synonyms":[{"name":"LuxS","type":"related"},{"name":"S-(5-deoxy-D-ribos-5-yl)-L-homocysteine homocysteine-lyase [(4S)-4,5-dihydroxypentan-2,3-dione-forming]","type":"related"},{"name":"S-ribosylhomocysteinase activity","type":"exact"},{"name":"ribosylhomocysteinase activity","type":"exact"}],"termid":"GO:0043768"}


id: GO:1903729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plasma membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:24514900","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of plasma membrane organization","synonyms":[{"name":"regulation of plasma membrane organisation","type":"exact"},{"name":"regulation of plasma membrane organization and biogenesis","type":"related"}],"termid":"GO:1903729"}


id: PBO:0040030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 5","termid":"PBO:0040030"}


id: PBO:0027592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0027592"}


id: GO:1900289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:1900288"},{"relation_name":"negatively_regulates","term_name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:0052799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"down regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"down-regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"downregulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"inhibition of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroimidazole breakdown","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroimidazole catabolism","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroimidazole reduction","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"negative regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"negative regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"negative regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"negative regulation of coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:1900289"}


id: PBO:0046142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5B","termid":"PBO:0046142"}


id: PBO:0087948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4E; mRNA cap binding protein and subunit of the mRNA cap-binding complex (eIF4F) along with eIF4A (Tif1p/Tif2p) and eIF4G (Tif4631p/Tif4632p), that mediates cap-dependent translation; required with eIF4G for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; protein abundance increases in response to DNA replication stress; human homolog EIF4E can complement the cdc33 null mutant","termid":"PBO:0087948"}


id: PBO:0017726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S7, Rsm7(predicted)","termid":"PBO:0017726"}


id: SO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 36th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K36_methylation_site","termid":"SO:0001733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K36_trimethylation_site","synonyms":[{"name":"H3K36 tri-methylation site","type":"exact"},{"name":"H3K36Me3","type":"related"}],"termid":"SO:0001724"}


id: GO:0046262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrotoluene biosynthetic process (obsolete GO:0046262)","synonyms":[{"name":"nitrotoluene anabolism","type":"exact"},{"name":"nitrotoluene biosynthesis","type":"exact"},{"name":"nitrotoluene biosynthetic process","type":"exact"},{"name":"nitrotoluene formation","type":"exact"},{"name":"nitrotoluene synthesis","type":"exact"}],"termid":"GO:0046262"}


id: PBO:0005656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup60","termid":"PBO:0005656"}


id: PBO:0030918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cortex_morphology_during_vegetative_growth","termid":"PBO:0030918"}


id: PBO:0062851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTOA pseudogene 1","termid":"PBO:0062851"}


id: GO:0033332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ent-kaurene. Ent-kaurene is a tetracyclic diterpenoid that is a precursor of several plant isoprenoids, including gibberellins.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5032","PMID:17064690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ent-kaurene metabolic process","termid":"GO:0033331"},{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ent-kaurene biosynthetic process","synonyms":[{"name":"ent-kaurene anabolism","type":"exact"},{"name":"ent-kaurene biosynthesis","type":"exact"},{"name":"ent-kaurene formation","type":"exact"},{"name":"ent-kaurene synthesis","type":"exact"}],"termid":"GO:0033332"}


id: FYPO:0004472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is abolished, and the protein is instead present in the nucleolus, during a cellular response to latrunculin B.","definition_xrefs":["PMID:18951025","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B","synonyms":[{"name":"abolished protein localisation to cytoplasm with protein mislocalised to nucleolus during cellular response to latrunculin B","type":"exact"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to LatB","type":"exact"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B during vegetative growth","type":"exact"},{"name":"protein localization to cytoplasm abolished with protein mislocalized to nucleolus during cellular response to latrunculin B","type":"exact"}],"termid":"FYPO:0004472"}


id: PR:Q09779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00263","PANTHER:PTHR21597:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.14","secondary_identifiers":["UniProtKB:Q09779"],"synonyms":[{"name":"Spom972h-THOC2","type":"exact"}],"termid":"PR:Q09779"}


id: PBO:0072212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 11","termid":"PBO:0072212"}


id: PBO:0091290
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM-like Enriched in Stalks","termid":"PBO:0091290"}


id: FYPO:0007940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is normal (i.e. indistinguishable from wild type). Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal chromatin organization","termid":"FYPO:0007940"}


id: PBO:0005409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf5","termid":"PBO:0005409"}


id: GO:0034628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD+), beginning with the catabolism of L-aspartate into the precursor quinolinate. NAD+ is a coenzyme that interconverts with its reduced form, NADH, in many redox and catabolic reactions.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"NAD biosynthetic process","termid":"GO:0009435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"'de novo' NAD biosynthetic process from L-aspartate","secondary_identifiers":["GO:0019355"],"synonyms":[{"name":"'de novo' NAD biosynthetic process from aspartate","type":"broad"},{"name":"de novo NAD biosynthetic process from aspartate","type":"related"},{"name":"nicotinamide nucleotide anabolism from aspartate","type":"exact"},{"name":"nicotinamide nucleotide biosynthetic process from aspartate","type":"exact"},{"name":"nicotinamide nucleotide formation from aspartate","type":"exact"},{"name":"nicotinamide nucleotide synthesis from aspartate","type":"exact"}],"termid":"GO:0034628"}


id: GO:0071058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the tetraspanin CD151.","definition_xrefs":["PMID:10811835","PMID:11884516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha3-beta1 integrin-CD151 complex","synonyms":[{"name":"ITGA3-ITGB1-CD151 complex","type":"narrow"}],"termid":"GO:0071058"}


id: PR:Q9UUB4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUB4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole-succinocarboxamide synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.10","synonyms":[{"name":"SAICAR synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade7","type":"exact"}],"termid":"PR:Q9UUB4"}


id: GO:0021934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cell in the hindbrain in which cells move orthogonal to the direction of radial migration.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain tangential cell migration","synonyms":[{"name":"hindbrain neurophilic migration","type":"related"}],"termid":"GO:0021934"}


id: GO:0008512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + H+(out) = sulfate(in) + H+(in).","definition_xrefs":["TC:2.A.53.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sulfate:proton symporter activity","secondary_identifiers":["RHEA:28574"],"synonyms":[{"name":"sulfate/hydrogen symporter activity","type":"exact"},{"name":"sulfate:hydrogen symporter activity","type":"exact"},{"name":"sulphate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0008512"}


id: PBO:0001984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase Gde1 (predicted)","termid":"PBO:0001984"}


id: MONDO:0003797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory MFH (obsolete MONDO:0003797)","termid":"MONDO:0003797","xrefs":{"Monarch":{"xref_id":"0003797"}}}


id: GO:0045771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces autophagosome size.","definition_xrefs":["GOC:go_curators","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagosome size","termid":"GO:0016243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"negative regulation of autophagosome size","synonyms":[{"name":"down regulation of autophagic vacuole size","type":"exact"},{"name":"down-regulation of autophagic vacuole size","type":"exact"},{"name":"downregulation of autophagic vacuole size","type":"exact"},{"name":"inhibition of autophagic vacuole size","type":"narrow"},{"name":"negative regulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0045771"}


id: FYPO:0007683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which components of the actin fusion focus are more widely distributed along the shmoo tip than normal.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton","termid":"FYPO:0005665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"wide actin fusion focus","synonyms":[{"name":"increased actin fusion focus diameter","type":"exact"},{"name":"increased actin fusion focus width","type":"exact"},{"name":"wider actin fusion focus","type":"exact"}],"termid":"FYPO:0007683"}


id: MONDO:0011651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, short stature, facial anomalies, and joint dislocations","secondary_identifiers":["OMIM:606220","MEDGEN:342897","MESH:C565248","UMLS:C1853507"],"synonyms":[{"name":"intellectual developmental disorder with short stature, facial anomalies, and speech defects","type":"exact"},{"name":"intellectual disability, short stature, facial anomalies, and JOINT dislocations","type":"related"},{"name":"mental retardation, short stature, facial anomalies, and JOINT dislocations","type":"related"}],"termid":"MONDO:0011651","xrefs":{"Monarch":{"xref_id":"0011651"}}}


id: PBO:0050501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC cluster antisense RNA 1","termid":"PBO:0050501"}


id: PBO:0043634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit gamma 1","termid":"PBO:0043634"}


id: GO:0015747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of urate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"urate transport","synonyms":[{"name":"urate transmembrane transport","type":"exact"},{"name":"uric acid transport","type":"exact"}],"termid":"GO:0015747"}


id: PBO:0041681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium dependent secretion activator 2","termid":"PBO:0041681"}


id: FYECO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiazole","termid":"FYECO:0000108"}


id: PBO:0068059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 364","termid":"PBO:0068059"}


id: PBO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshifted","termid":"PBO:0000108"}


id: GO:0098866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of the membrane of a multivesicular body with the apical plasma membrane, resulting in release of exosomes from the cell.","definition_xrefs":["PMID:26459596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion to plasma membrane","termid":"GO:0099500"},{"relation_name":"part_of","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0044085","GO:0008150","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"multivesicular body fusion to apical plasma membrane","termid":"GO:0098866"}


id: RO:HOM0000047
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves the chromosomes able to pair (synapse) during meiosis.","definition_xrefs":["ISBN:0195307615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_chromosomal_homology_relationship_with","synonyms":[{"name":"chromosomal homologous to","type":"exact"}],"termid":"RO:HOM0000047"}


id: PBO:0027863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K56_acetylation","termid":"PBO:0027863"}


id: PBO:0044078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin like 1","termid":"PBO:0044078"}


id: PBO:0070255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 200 pseudogene","termid":"PBO:0070255"}


id: PBO:0108576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and Rpd3L histone deacetylase complex LCCL domain subunit Rxt3","termid":"PBO:0108576"}


id: GO:0035637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of information occurring at the level of a multicellular organism.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular organismal signaling (obsolete GO:0035637)","synonyms":[{"name":"multicellular organismal signalling","type":"exact"}],"termid":"GO:0035637"}


id: GO:0106226
data:
  {"annotated_genes":["SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99290],"is_not":false,"summary":null,"term":"GO:0106226"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyisobutyryl-CoA + lysine in peptide = CoA + N-2-hydroxyisobutyryl-lysine-peptide.","definition_xrefs":["GOC:sp","PMID:29775581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptide 2-hydroxyisobutyryltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:24180"],"termid":"GO:0106226","terms_by_termid":{"GO:0106226":null}}


id: MONDO:0056798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the vermiform appendix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"disorder of appendix","secondary_identifiers":["EFO:0009542","DOID:60000","ICD10CM:K35-K38","SCTID:18526009","UMLS:C0267613","MEDGEN:540821","ICD9:543.9"],"synonyms":[{"name":"appendiceal disease","type":"exact"},{"name":"appendix disease","type":"exact"},{"name":"disease of appendix","type":"exact"},{"name":"disease of vermiform appendix","type":"exact"},{"name":"disease or disorder of vermiform appendix","type":"exact"},{"name":"disorder of appendix","type":"exact"},{"name":"disorder of vermiform appendix","type":"exact"},{"name":"vermiform appendix disease","type":"exact"},{"name":"vermiform appendix disease or disorder","type":"exact"}],"termid":"MONDO:0056798","xrefs":{"Monarch":{"xref_id":"0056798"}}}


id: MONDO:0004878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast upper-outer quadrant cancer","secondary_identifiers":["MEDGEN:509326","UMLS:C0153552","SCTID:188154003","DOID:9773","ICD9:174.4"],"termid":"MONDO:0004878","xrefs":{"Monarch":{"xref_id":"0004878"}}}


id: PBO:0056927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major intrinsic protein of lens fiber","termid":"PBO:0056927"}


id: MONDO:0044975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of transporter activity (obsolete MONDO:0044975)","termid":"MONDO:0044975","xrefs":{"Monarch":{"xref_id":"0044975"}}}


id: PR:O14307
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00817","PANTHER:PTHR12133:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trm61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.12","secondary_identifiers":["UniProtKB:O14307"],"synonyms":[{"name":"Spom972h-TRMT61A","type":"exact"},{"name":"tRNA(m1A58)-methyltransferase subunit trm61 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1A58)MTase subunit trm61 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14307"}


id: PBO:0057676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1267","termid":"PBO:0057676"}


id: PBO:0045178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B1","termid":"PBO:0045178"}


id: PBO:0052023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctophilin 1","termid":"PBO:0052023"}


id: GO:0031452
data:
  {"annotated_genes":["SJAG_04369","SJAG_02723","SJAG_03255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77609,106978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[108813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of heterochromatin formation.","definition_xrefs":["PMID:16855380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"is_a","term_name":"negative regulation of chromatin organization","termid":"GO:1905268"},{"relation_name":"negatively_regulates","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_03255":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromatin decompaction","type":"exact"},{"name":"chromatin decondensation","type":"exact"},{"name":"down regulation of heterochromatin formation","type":"exact"},{"name":"down-regulation of heterochromatin formation","type":"exact"},{"name":"downregulation of heterochromatin formation","type":"exact"},{"name":"inhibition of heterochromatin formation","type":"narrow"},{"name":"negative regulation of heterochromatin assembly","type":"exact"}],"termid":"GO:0031452","terms_by_termid":{"GO:0060906":null,"GO:0061188":null}}


id: PBO:0070357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 30","termid":"PBO:0070357"}


id: PBO:0030890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_response_phenotype_during_vegetative_growth","termid":"PBO:0030890"}


id: GO:0060117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an auditory receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell development","termid":"GO:0060119"},{"relation_name":"part_of","term_name":"inner ear auditory receptor cell differentiation","termid":"GO:0042491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell development","synonyms":[{"name":"auditory hair cell development","type":"exact"}],"termid":"GO:0060117"}


id: PBO:0004388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex component Pob3","termid":"PBO:0004388"}


id: MONDO:1012259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal dysraphism, non-human animal","termid":"MONDO:1011671"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysraphism, dog","secondary_identifiers":["OMIA:000938-9615"],"termid":"MONDO:1012259","xrefs":{"Monarch":{"xref_id":"1012259"}}}


id: MONDO:0003472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious infestation of parasitic insects found on the head (Pediculus humanus capitis), body (Pediculus humanus corporis), or pubic area (Pthirus pubis) that typically cause itching and rash.","definition_xrefs":["NCIT:C128401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic ectoparasitic infectious disease","termid":"MONDO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lice infestation","secondary_identifiers":["MEDGEN:18339","ICD10CM:B85.2","DOID:5502","MESH:D010373","UMLS:C0030756","ICD9:132.9"],"synonyms":[{"name":"Pediculus humanus infection","type":"exact"},{"name":"infections, Pediculus humanus","type":"related"},{"name":"infestation by Pediculus","type":"exact"},{"name":"louse infestation","type":"exact"},{"name":"louse infestation (& [pediculosis and Phthirus] or [lice])","type":"exact"},{"name":"mixed pediculosis","type":"exact"},{"name":"mixed pediculosis infestation","type":"exact"},{"name":"pediculosis","type":"exact"},{"name":"pediculosis + lice","type":"exact"},{"name":"pediculosis and Phthirus infection","type":"exact"},{"name":"pediculosis and Phthirus infections","type":"exact"},{"name":"pediculosis and Phthirus infestation","type":"exact"},{"name":"pediculosis, unspecified","type":"exact"}],"termid":"MONDO:0003472","xrefs":{"Monarch":{"xref_id":"0003472"}}}


id: PBO:0004989
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acatalasia","termid":"PBO:0004989"}


id: MONDO:0015745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-polymicrogyria-corpus callosum agenesis syndrome is a rare, genetic, central nervous system malformation syndrome characterized by marked prenatal-onset microcephaly, severe motor delay with hypotonia, bilateral polymicrogyria, corpus callosum agenesis, ventricular dilation, small cerebellum and early lethality.","definition_xrefs":["Orphanet:171703"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-polymicrogyria-corpus callosum agenesis syndrome","secondary_identifiers":["GARD:20125","MEDGEN:1653942","UMLS:C4750772"],"termid":"MONDO:0015745","xrefs":{"Monarch":{"xref_id":"0015745"}}}


id: MONDO:0016449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"mid-dermal elastolysis","secondary_identifiers":["Orphanet:228299","GARD:20589","icd11.foundation:1379952112","UMLS:C4728147","MEDGEN:1672488"],"termid":"MONDO:0016449","xrefs":{"Monarch":{"xref_id":"0016449"}}}


id: GO:0102194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a [protein]-N6-D-fructosyl-L-lysine = ADP + H+ + a [protein]-N6-(3-O-phospho-D-fructosyl)-L-lysine.","definition_xrefs":["GOC:pz","EC:2.7.1.171","PMID:11016445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-fructosamine 3-kinase activity","secondary_identifiers":["RHEA:59832","GO:0030387","MetaCyc:RXN-12005"],"synonyms":[{"name":"fructosamine-3-kinase activity","type":"related"}],"termid":"GO:0102194"}


id: FYPO:0001566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-citrulline measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular citrulline level","synonyms":[{"name":"increased cellular L-citrulline level","type":"exact"},{"name":"increased cellular citrulline level during mitotic cell cycle","type":"related"},{"name":"increased cellular citrulline level during vegetative growth","type":"exact"},{"name":"increased citrulline accumulation","type":"related"}],"termid":"FYPO:0001566"}


id: MONDO:0005354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of hepatitis C infection.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis C virus infection","termid":"MONDO:0005231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"chronic hepatitis C virus infection","secondary_identifiers":["ICD9:070.44","MESH:D019698","EFO:0004220"],"synonyms":[{"name":"chronic Hepatitis C","type":"exact"},{"name":"hepatitis C infection, chronic","type":"exact"},{"name":"hepatitis C, chronic","type":"exact"}],"termid":"MONDO:0005354","xrefs":{"Monarch":{"xref_id":"0005354"}}}


id: PR:Q10329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pre6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.16","synonyms":[{"name":"Spom972h-pre6","type":"exact"}],"termid":"PR:Q10329"}


id: PBO:0028044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_cytoplasmic_microtubule_polymerization","termid":"PBO:0028044"}


id: MONDO:1011740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary seborrhea-oleosa, non-human animal","secondary_identifiers":["OMIA:000822"],"termid":"MONDO:1011740","xrefs":{"Monarch":{"xref_id":"1011740"}}}


id: GO:1900615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emericellamide A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"emericellamide metabolic process","termid":"GO:1900555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"emericellamide A metabolic process","synonyms":[{"name":"emericellamide A metabolism","type":"exact"}],"termid":"GO:1900615"}


id: GO:0047309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-dopa = 3,4-dihydroxyphenylpyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.49","RHEA:15273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"dihydroxyphenylalanine transaminase activity","secondary_identifiers":["KEGG_REACTION:R02077","MetaCyc:2.6.1.49-RXN"],"synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"DOPA aminotransferase activity","type":"related"},{"name":"L-dopa transaminase activity","type":"related"},{"name":"aspartate-DOPP transaminase (ADT)","type":"related"},{"name":"dihydroxyphenylalanine aminotransferase activity","type":"exact"},{"name":"dopa transaminase activity","type":"related"},{"name":"glutamate-DOPP transaminase (GDT)","type":"related"},{"name":"phenylalanine-DOPP transaminase (PDT)","type":"related"}],"termid":"GO:0047309"}


id: MONDO:0043139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"visual epilepsy","termid":"MONDO:0001386"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"microcephaly sparse hair intellectual disability seizures","secondary_identifiers":["UMLS:C2931530","MESH:C537545","MEDGEN:444077"],"termid":"MONDO:0043139","xrefs":{"Monarch":{"xref_id":"0043139"}}}


id: FYPO:0001743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which isochromosome formation occurs more frequently than in wild type cells, and in which the break point is located in the imr region in the majority of cases. In isochromosome formation, one chromosome arm is lost and the other arm is duplicated in its place.","definition_xrefs":["PomBase:al","PMID:18923422","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased isochromosome formation","termid":"FYPO:0001742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased isochromosome formation with preferential breakage in the imr region","synonyms":[{"name":"increased occurrence of isochromosome formation with preferential breakage in the imr region","type":"exact"}],"termid":"FYPO:0001743"}


id: GO:1900388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of vesicle-mediated transport.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:18622392"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900388)","synonyms":[{"name":"regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900388"}


id: PBO:0108506
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eco_evidence","termid":"PBO:0108506"}


id: PBO:0061159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide riboside kinase 2","termid":"PBO:0061159"}


id: MONDO:0023045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia arthrogryposis diabetes mellitus","secondary_identifiers":["GARD:2042"],"termid":"MONDO:0023045","xrefs":{"Monarch":{"xref_id":"0023045"}}}


id: GO:0010817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the levels of hormone within an organism or a tissue. A hormone is any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hormone levels","termid":"GO:0010817"}


id: PBO:0047714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 5","termid":"PBO:0047714"}


id: PBO:0031435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation","termid":"PBO:0031435"}


id: PBO:0053796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1050","termid":"PBO:0053796"}


id: PBO:0041039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 DNA repair associated","termid":"PBO:0041039"}


id: FYPO:0007353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region on chromosome 2.","definition_xrefs":["PomBase:mah","PMID:31811152","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","synonyms":[{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"normal homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"}],"termid":"FYPO:0007353"}


id: PBO:0031658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth_during_cellular_hyperosmotic_response","termid":"PBO:0031658"}


id: FYPO:0007210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total volume of all mitochondria in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrial morphology","termid":"FYPO:0003896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitochondrial volume","synonyms":[{"name":"normal mitochondrial volume during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial volume during vegetative growth","type":"exact"},{"name":"normal total mitochondrial volume","type":"exact"}],"termid":"FYPO:0007210"}


id: PBO:0049030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 17","termid":"PBO:0049030"}


id: GO:0018080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-tryptophan, to form peptidyl-L-6'-bromotryptophan.","definition_xrefs":["RESID:AA0179"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan bromination (obsolete GO:0018080)","termid":"GO:0018080"}


id: PBO:0052005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"joining chain of multimeric IgA and IgM pseudogene 1","termid":"PBO:0052005"}


id: GO:1990229
data:
  {"annotated_genes":["SJAG_02497","SJAG_02866","SJAG_03701","SJAG_03862","SJAG_02895","SJAG_01238","SJAG_03222","SJAG_00532","SJAG_01063","SJAG_00894","SJAG_04397","SJAG_04016","SJAG_00186","SJAG_02994","SJAG_00040","SJAG_02306"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100356,99254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904564"},{"annotations":[68430,79697,89288,71853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097361"},{"annotations":[107203,114201,93283,110002,98580,103425,93513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099128"},{"annotations":[93101,118181,105084,110186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120510"}]},"cv_name":"cellular_component","definition":"A protein complex capable of assembling an iron-sulfur (Fe-S) cluster.","definition_xrefs":["GOC:bhm","PMID:17350958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_00186":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_02306":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"iron-sulfur cluster assembly complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Fe-S cluster assembly complex","type":"narrow"},{"name":"SufBCD complex","type":"narrow"}],"termid":"GO:1990229","terms_by_termid":{"GO:0097361":null,"GO:0099128":null,"GO:0120510":null,"GO:1904564":null}}


id: PBO:0056422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myristoylated alanine rich protein kinase C substrate pseudogene 1","termid":"PBO:0056422"}


id: PATO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation exposure quality inhering in a tissue by virtue of the relation between the absorbed dose to the effective biological damage of the radiation to that tissue.","definition_xrefs":["arpansa:arpansa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation exposure","termid":"PATO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation equivalent dose","termid":"PATO:0001746"}


id: PBO:0113818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon beta subunit, GEF Sbh1","termid":"PBO:0113818"}


id: GO:0045159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II myosin, any member of the class of 'conventional' double-headed myosins that includes muscle myosin.","definition_xrefs":["PMID:27697842","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0008092","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"myosin II binding","termid":"GO:0045159"}


id: PBO:0042617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneodesmosin","termid":"PBO:0042617"}


id: PBO:0083193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene BUD5/YCR038C; identified by homology with hemiascomycetous yeast species","termid":"PBO:0083193"}


id: SO:0002322
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop_gained (SO:0001587) variant that allows the transcript to escape nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_gained","termid":"SO:0001587"},{"relation_name":"is_a","term_name":"NMD_escaping_variant","termid":"SO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained_NMD_escaping","synonyms":[{"name":"stop gained variant-nonsense-mediated decay escaping","type":"exact"},{"name":"stop gained-NMD escaping","type":"exact"}],"termid":"SO:0002322"}


id: PBO:0071682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 14","termid":"PBO:0071682"}


id: PR:000027619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 phosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:Q10424-1, MOD:00696.","definition_xrefs":["PomBase:MAH","PMID:15660136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zip1/PhosRes+","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription factor zip1 phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-zip1/PhosRes+","type":"exact"},{"name":"zip1/PhosRes+","type":"exact"}],"termid":"PR:000027619"}


id: GO:0045714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045714)","synonyms":[{"name":"regulation of LDLr biosynthesis","type":"exact"},{"name":"regulation of LDLr biosynthetic process","type":"exact"},{"name":"regulation of low-density lipoprotein receptor anabolism","type":"exact"},{"name":"regulation of low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"regulation of low-density lipoprotein receptor formation","type":"exact"},{"name":"regulation of low-density lipoprotein receptor synthesis","type":"exact"}],"termid":"GO:0045714"}


id: PBO:0065688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary tumor-transforming 4 pseudogene","termid":"PBO:0065688"}


id: PBO:0041405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 120","termid":"PBO:0041405"}


id: PBO:0071059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 61","termid":"PBO:0071059"}


id: PBO:0038511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 2","termid":"PBO:0038511"}


id: PBO:0081702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 623","termid":"PBO:0081702"}


id: GO:0051672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the cell wall peptidoglycans of another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall peptidoglycan in other organism (obsolete GO:0051672)","synonyms":[{"name":"catabolic process of cell wall peptidoglycans of other organism","type":"exact"},{"name":"catabolism of cell wall peptidoglycans of other organism","type":"exact"},{"name":"cell wall catabolic process in other organism","type":"narrow"},{"name":"cell wall catabolism in other organism","type":"narrow"},{"name":"cell wall peptidoglycan catabolic process in another organism","type":"exact"}],"termid":"GO:0051672"}


id: GO:1990372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to organic acid.","definition_xrefs":["PMID:23356676","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to organic acid (obsolete GO:1990372)","termid":"GO:1990372"}


id: GO:0032618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-15 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-15 production","secondary_identifiers":["GO:0072613","GO:0042233"],"synonyms":[{"name":"IL-15 production","type":"exact"},{"name":"interleukin-15 biosynthetic process","type":"narrow"},{"name":"interleukin-15 secretion","type":"narrow"}],"termid":"GO:0032618"}


id: GO:0006170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dAMP, deoxyadenosine monophosphate (2'-deoxyadenosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dAMP metabolic process","termid":"GO:0046053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dAMP biosynthetic process","synonyms":[{"name":"dAMP anabolism","type":"exact"},{"name":"dAMP biosynthesis","type":"exact"},{"name":"dAMP formation","type":"exact"},{"name":"dAMP synthesis","type":"exact"}],"termid":"GO:0006170"}


id: GO:0002523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body contributing to an inflammatory response.","definition_xrefs":["PMID:14680625","PMID:7507411","PMID:14708592","GOC:add","PMID:8600538","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration involved in inflammatory response","synonyms":[{"name":"immune cell migration during inflammatory response","type":"related"},{"name":"immune cell trafficking during inflammatory response","type":"related"},{"name":"leucocyte migration during inflammatory response","type":"related"},{"name":"leucocyte trafficking during inflammatory response","type":"related"},{"name":"leukocyte migration during inflammatory response","type":"related"},{"name":"leukocyte trafficking during inflammatory response","type":"related"}],"termid":"GO:0002523"}


id: PATO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of duration having progressive course of indefinite duration with active, acute-like elements.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic","termid":"PATO:0001863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic-active","termid":"PATO:0002414"}


id: MONDO:0004764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"enthesopathy","termid":"MONDO:0002183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibular collateral ligament bursitis","secondary_identifiers":["MEDGEN:510512","UMLS:C0158316","SCTID:77323000","DOID:9358","ICD9:726.63"],"termid":"MONDO:0004764","xrefs":{"Monarch":{"xref_id":"0004764"}}}


id: PATO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000928 absolute photosensitivity (obsolete PATO:0000928)","termid":"PATO:0000928"}


id: FYPO:0000728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch organization","termid":"FYPO:0000790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0004803","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin cortical patch assembly","synonyms":[{"name":"abnormal F-actin patch assembly","type":"exact"},{"name":"abnormal actin cortical patch assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch assembly during vegetative growth","type":"exact"},{"name":"abnormal actin patch assembly","type":"exact"}],"termid":"FYPO:0000728"}


id: PBO:0044227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 1","termid":"PBO:0044227"}


id: GO:0048311
data:
  {"annotated_genes":["SJAG_04003","SJAG_02509","SJAG_01741","SJAG_02848","SJAG_00655"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112462],"is_not":false,"summary":null,"term":"GO:0048311"},{"annotations":[107533,76739,107744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048312"},{"annotations":[103085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000001"}]},"cv_name":"biological_process","definition":"Any process that establishes the spatial arrangement of mitochondria between and within cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion localization","termid":"GO:0051646"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00655":null,"SJAG_01741":null,"SJAG_02509":null,"SJAG_02848":null,"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrion distribution","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"distribution of mitochondria","type":"exact"},{"name":"mitochondrial distribution","type":"exact"},{"name":"positioning of mitochondria","type":"related"}],"termid":"GO:0048311","terms_by_termid":{"GO:0000001":null,"GO:0048311":null,"GO:0048312":null}}


id: PBO:0039623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A6","termid":"PBO:0039623"}


id: MONDO:0016776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontal fibrosing alopecia (FFA) is a rare variant of lichen planopilaris characterized by symmetrical, progressive, band-like anterior hair loss of the scalp.","definition_xrefs":["Orphanet:254492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontal fibrosing alopecia","secondary_identifiers":["GARD:10886","SCTID:717055000","MEDGEN:899012","UMLS:C4255374","icd11.foundation:1257078333","ICD10CM:L66.1"],"synonyms":[{"name":"FFA","type":"exact"}],"termid":"MONDO:0016776","xrefs":{"Monarch":{"xref_id":"0016776"}}}


id: PBO:0013794
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinates updated from 3789585..3789948 to 3789400..3789948","termid":"PBO:0013794"}


id: FYPO:0007388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is assembled in an incorrect orientation. Normally, the spindle is parallel to the long axis of the cell.","definition_xrefs":["PMID:18495844","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002399","FYPO:0000120","FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"misoriented mitotic spindle","synonyms":[{"name":"abnormal angle of mitotic spindle orientation","type":"related"},{"name":"abnormal mitotic spindle orientation","type":"exact"},{"name":"misoriented mitotic spindle during mitotic cell cycle","type":"related"},{"name":"misoriented mitotic spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0007388"}


id: MONDO:0020080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histiocytic and dendritic cell tumor (obsolete MONDO:0020080)","termid":"MONDO:0020080","xrefs":{"Monarch":{"xref_id":"0020080"}}}


id: SO:0001133
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles of the second and third residues, which are the basis for sub-categorization.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_turn_motif","termid":"SO:0001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn","secondary_identifiers":["BS:00212"],"synonyms":[{"name":"beta turn","type":"exact"}],"termid":"SO:0001133"}


id: GO:1900907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexadecanal metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of hexadecanal metabolic process","termid":"GO:1900905"},{"relation_name":"positively_regulates","term_name":"hexadecanal metabolic process","termid":"GO:0046458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hexadecanal metabolic process","synonyms":[{"name":"activation of hexadecanal metabolic process","type":"narrow"},{"name":"activation of hexadecanal metabolism","type":"narrow"},{"name":"positive regulation of hexadecanal metabolism","type":"related"},{"name":"up regulation of hexadecanal metabolic process","type":"exact"},{"name":"up regulation of hexadecanal metabolism","type":"related"},{"name":"up-regulation of hexadecanal metabolic process","type":"exact"},{"name":"up-regulation of hexadecanal metabolism","type":"related"},{"name":"upregulation of hexadecanal metabolic process","type":"exact"},{"name":"upregulation of hexadecanal metabolism","type":"related"}],"termid":"GO:1900907"}


id: GO:0006864
data:
  {"annotated_genes":["SJAG_00154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The directed movement of a pyrimidine nucleotide, any compound consisting of a pyrimidine nucleoside esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pyrimidine nucleotide transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0006864","terms_by_termid":{"GO:1990519":null}}


id: GO:0019541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate, the anion derived from propionic (propanoic) acid, a carboxylic acid important in the energy metabolism of ruminants.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"propionate metabolic process","synonyms":[{"name":"propanoate metabolic process","type":"exact"},{"name":"propanoate metabolism","type":"exact"},{"name":"propionate metabolism","type":"exact"}],"termid":"GO:0019541"}


id: MONDO:0009501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metabolic myopathy due to lactate transporter defect is a rare metabolic myopathy characterized by muscle cramping and/or stiffness after exercise (especially during heat exposure), post-exertional rhabdomyolysis and myoglobinuria, and elevation of serum creatine kinase.","definition_xrefs":["Orphanet:171690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic myopathy","termid":"MONDO:0020123"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"metabolic myopathy due to lactate transporter defect","secondary_identifiers":["SCTID:766715000","GARD:17067","MEDGEN:344529","MESH:C565449","OMIM:245340","UMLS:C1855577"],"synonyms":[{"name":"erythrocyte lactate transporter defect","type":"exact"},{"name":"lactate transporter defect, myopathy due to","type":"related"}],"termid":"MONDO:0009501","xrefs":{"Monarch":{"xref_id":"0009501"}}}


id: PBO:0038382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_exposure_stressor","termid":"PBO:0038382"}


id: FYPO:0000488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic recombination","synonyms":[{"name":"meiotic recombination: normal","type":"related"}],"termid":"FYPO:0000488"}


id: PBO:0088996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Ltc1","termid":"PBO:0088996"}


id: FYPO:0007566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation begins earlier than normal.","definition_xrefs":["PMID:11927555","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000337","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"premature mitotic chromosome condensation","synonyms":[{"name":"advanced mitotic chromosome condensation","type":"exact"},{"name":"premature chromosome condensation during mitotic cell cycle","type":"related"},{"name":"premature mitotic chromosome condensation during vegetative growth","type":"exact"}],"termid":"FYPO:0007566"}


id: PBO:0034657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_3'_overhang_length","termid":"PBO:0034657"}


id: PBO:0052754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 46","termid":"PBO:0052754"}


id: MONDO:0010729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked mental retardation, Schimke type, is characterized by intellectual deficit, growth retardation with short stature, deafness and ophthalmoplegia. Choreoathetosis with muscle spasticity generally appears during childhood. It has been described in four boys, three of whom were from the same family. Transmission is X-linked.","definition_xrefs":["Orphanet:85285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Schimke type","secondary_identifiers":["MEDGEN:374193","MESH:C536630","OMIM:312840","UMLS:C1839320","GARD:9288","SCTID:719010001"],"synonyms":[{"name":"Schimke X-linked intellectual disability syndrome","type":"related"},{"name":"Schimke X-linked mental retardation syndrome","type":"related"},{"name":"childhood-onset choreoathetosis with spasticity, postnatal microcephaly, growth and intellectual disability, ophthalmoplegia, and deafness","type":"related"},{"name":"childhood-onset choreoathetosis with spasticity, postnatal microcephaly, growth and mental retardation, ophthalmoplegia, and deafness","type":"related"},{"name":"choreoathetosis with intellectual disability X- linked","type":"related"},{"name":"choreoathetosis with intellectual disability, X-linked","type":"related"},{"name":"choreoathetosis with mental retardation X- linked","type":"related"},{"name":"choreoathetosis with mental retardation, X-linked","type":"related"},{"name":"progressive basal ganglion dysfunction, mental and growth retardation, external ophthalmoplegia, postnatal microcephaly and deafness","type":"related"}],"termid":"MONDO:0010729","xrefs":{"Monarch":{"xref_id":"0010729"}}}


id: GO:1903181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dopamine biosynthetic process.","definition_xrefs":["PMID:19703902","GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of dopamine metabolic process","termid":"GO:0045964"},{"relation_name":"is_a","term_name":"regulation of dopamine biosynthetic process","termid":"GO:1903179"},{"relation_name":"positively_regulates","term_name":"dopamine biosynthetic process","termid":"GO:0042416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine biosynthetic process","synonyms":[{"name":"activation of dopamine anabolism","type":"narrow"},{"name":"activation of dopamine biosynthesis","type":"narrow"},{"name":"activation of dopamine biosynthetic process","type":"narrow"},{"name":"activation of dopamine formation","type":"narrow"},{"name":"activation of dopamine synthesis","type":"narrow"},{"name":"positive regulation of dopamine anabolism","type":"exact"},{"name":"positive regulation of dopamine biosynthesis","type":"exact"},{"name":"positive regulation of dopamine formation","type":"exact"},{"name":"positive regulation of dopamine synthesis","type":"exact"},{"name":"up regulation of dopamine anabolism","type":"exact"},{"name":"up regulation of dopamine biosynthesis","type":"exact"},{"name":"up regulation of dopamine biosynthetic process","type":"exact"},{"name":"up regulation of dopamine formation","type":"exact"},{"name":"up regulation of dopamine synthesis","type":"exact"},{"name":"up-regulation of dopamine anabolism","type":"exact"},{"name":"up-regulation of dopamine biosynthesis","type":"exact"},{"name":"up-regulation of dopamine biosynthetic process","type":"exact"},{"name":"up-regulation of dopamine formation","type":"exact"},{"name":"up-regulation of dopamine synthesis","type":"exact"},{"name":"upregulation of dopamine anabolism","type":"exact"},{"name":"upregulation of dopamine biosynthesis","type":"exact"},{"name":"upregulation of dopamine biosynthetic process","type":"exact"},{"name":"upregulation of dopamine formation","type":"exact"},{"name":"upregulation of dopamine synthesis","type":"exact"}],"termid":"GO:1903181"}


id: PBO:0041261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q A chain","termid":"PBO:0041261"}


id: PBO:0072765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A16","termid":"PBO:0072765"}


id: MONDO:0011923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteoarthritis in which the cause of the disease is a mutation in the ASPN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis susceptibility 3","secondary_identifiers":["OMIM:607850","UMLS:C2675609","MEDGEN:382650"],"synonyms":[{"name":"ASPN osteoarthritis","type":"exact"},{"name":"OS3","type":"related"},{"name":"osteoarthritis caused by mutation in ASPN","type":"exact"},{"name":"osteoarthritis of knee/hip","type":"related"},{"name":"osteoarthritis susceptibility 3","type":"exact"},{"name":"osteoarthritis susceptibility type 3","type":"exact"}],"termid":"MONDO:0011923","xrefs":{"Monarch":{"xref_id":"0011923"}}}


id: PBO:0036264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex scaffold subunit Not1","termid":"PBO:0036264"}


id: SO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with a start codon other than AUG.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"contains","term_name":"non_canonical_start_codon","termid":"SO:0000680"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_non_canonical_start_codon","synonyms":[{"name":"gene with non canonical start codon","type":"exact"}],"termid":"SO:0001739"}


id: MONDO:0003268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor composed of two or more glial cell types (astrocytes, ependymal cells, and oligodendrocytes).","definition_xrefs":["NCIT:C3903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed glioma","secondary_identifiers":["ICDO:9382/3","SCTID:443937008","DOID:5076","MEDGEN:75477","UMLS:C0259783"],"synonyms":[{"name":"glioma, mixed","type":"exact"},{"name":"glioma, mixed, malignant","type":"exact"},{"name":"mixed glial neoplasm","type":"exact"},{"name":"mixed glial tumor","type":"exact"},{"name":"mixed glial tumour","type":"exact"},{"name":"mixed glioma","type":"exact"},{"name":"mixed glioma (morphologic abnormality)","type":"exact"},{"name":"mixed gliomas","type":"exact"},{"name":"mixed neuroglial neoplasm","type":"exact"},{"name":"mixed neuroglial tumor","type":"exact"},{"name":"mixed neuroglial tumour","type":"exact"}],"termid":"MONDO:0003268","xrefs":{"Monarch":{"xref_id":"0003268"}}}


id: PBO:0043474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNOT10 antisense RNA 1","termid":"PBO:0043474"}


id: GO:0014744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle adaptation","synonyms":[{"name":"positive regulation of muscle plasticity","type":"related"}],"termid":"GO:0014744"}


id: PBO:0087962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transport adaptor or symportin; assembly chaperone that co-translationally associates with nascent Rpl5p, preventing aggregation; facilitates synchronized nuclear coimport of two 5S-rRNA binding proteins, Rpl5p and Rpl11p, mediated by import receptor Kap104p; required for biogenesis of the large ribosomal subunit; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0087962"}


id: PBO:0069466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 731, pseudogene","termid":"PBO:0069466"}


id: PBO:0031002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_dithiothreitol","termid":"PBO:0031002"}


id: GO:0071715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of icosanoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Icosanoids are unsaturated C20 fatty acids and skeletally related compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"icosanoid transport","synonyms":[{"name":"eicosanoid transport","type":"exact"}],"termid":"GO:0071715"}


id: GO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-decaprenyl diphosphate + 4-hydroxybenzoate = 3-decaprenyl-4-hydroxybenzoate + diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxybenzoate decaprenyltransferase activity (obsolete GO:0002083)","secondary_identifiers":["Reactome:R-HSA-2162192"],"termid":"GO:0002083"}


id: GO:2001165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues.","definition_xrefs":["PMID:15149594"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:2001165)","termid":"GO:2001165"}


id: GO:1905785
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102680],"is_not":false,"summary":null,"term":"GO:1905785"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anaphase-promoting complex-dependent catabolic process.","definition_xrefs":["GO_REF:0000058","PMID:10921876","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032435"},{"relation_name":"is_a","term_name":"regulation of anaphase-promoting complex-dependent catabolic process","termid":"GO:1905784"},{"relation_name":"negatively_regulates","term_name":"anaphase-promoting complex-dependent catabolic process","termid":"GO:0031145"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of anaphase-promoting complex-dependent catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905785","terms_by_termid":{"GO:1905785":null}}


id: PBO:0073566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src homology 2 domain containing F","termid":"PBO:0073566"}


id: PBO:0048218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 2","termid":"PBO:0048218"}


id: GO:0008886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + H2O + NADP+ = 3-phospho-D-glycerate + 2 H+ + NADPH.","definition_xrefs":["EC:1.2.1.9","RHEA:14669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (non-phosphorylating) activity","termid":"GO:0120533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity","secondary_identifiers":["MetaCyc:1.2.1.9-RXN","KEGG_REACTION:R01058"],"synonyms":[{"name":"D-glyceraldehyde-3-phosphate:NADP+ oxidoreductase activity","type":"exact"},{"name":"NADP-glyceraldehyde phosphate dehydrogenase","type":"broad"},{"name":"NADP-glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"},{"name":"dehydrogenase, glyceraldehyde phosphate (nicotinamide adenine dinucleotide phosphate)","type":"broad"},{"name":"glyceraldehyde 3-phosphate dehydrogenase (NADP)","type":"exact"},{"name":"glyceraldehyde phosphate dehydrogenase (NADP)","type":"broad"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NADP)","type":"exact"},{"name":"glyceraldehyde-3-phosphate:NADP reductase activity","type":"exact"},{"name":"nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"},{"name":"triosephosphate dehydrogenase activity","type":"broad"}],"termid":"GO:0008886"}


id: GO:0032477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric complex that possesses polyprenyl diphosphate synthase activity involved in the synthesis of the isoprenoid chain of ubiquinone whose length varies between organisms.","definition_xrefs":["PMID:14519123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyl diphosphate synthase complex","termid":"GO:0032476"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"homodimeric polyprenyl diphosphate synthase complex","synonyms":[{"name":"homodimeric decaprenyl diphosphate synthase complex","type":"narrow"}],"termid":"GO:0032477"}


id: MONDO:0001450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arachnoiditis (obsolete MONDO:0001450)","termid":"MONDO:0001450","xrefs":{"Monarch":{"xref_id":"0001450"}}}


id: GO:0033156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oligogalacturonides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"oligogalacturonide transport","termid":"GO:0033156"}


id: PBO:0046726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 5 like","termid":"PBO:0046726"}


id: PBO:0057522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 640","termid":"PBO:0057522"}


id: MOD:01974
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to S-methyl-L-methionine.","definition_xrefs":["RESID:AA0616","ChEBI:17728","PubMed:23532849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated methionine","termid":"MOD:00716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"S-methyl-L-methionine","synonyms":[{"name":"(2S)-2-amino-4-(dimethylsulfonio)butanoate","type":"exact"},{"name":"(3S)-(3-amino-3-carboxypropyl)dimethylsulfanium","type":"exact"},{"name":"S-methyl-L-methionine","type":"exact"},{"name":"S-methylmethionine","type":"exact"},{"name":"S-methylmethioninium","type":"exact"},{"name":"[(3S)-3-amino-3-carboxypropyl](dimethyl)sulfonium","type":"exact"},{"name":"vitamin U","type":"exact"}],"termid":"MOD:01974"}


id: FYPO:0002082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination during vegetative growth","termid":"FYPO:0000905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased protein ubiquitination during vegetative growth","synonyms":[{"name":"increased protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"increased protein ubiquitinylation during vegetative growth","type":"exact"},{"name":"increased protein ubiquitylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002082"}


id: PBO:0049713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 1","termid":"PBO:0049713"}


id: GO:0042431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole metabolic process","synonyms":[{"name":"indole metabolism","type":"exact"}],"termid":"GO:0042431"}


id: PBO:0072699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUSF1 divergent transcript","termid":"PBO:0072699"}


id: PBO:0086520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; partially overlaps dubious ORF YFL015W-A; YFL015C is not an essential gene","termid":"PBO:0086520"}


id: MOD:01127
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01166. Remap to MOD:01166.","definition_xrefs":["DeltaMass:292"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01127 5'phos Uridinyl (obsolete MOD:01127)","termid":"MOD:01127"}


id: PBO:0038624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptotic chromatin condensation inducer 1","termid":"PBO:0038624"}


id: PBO:0027058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_polysaccharide_level","termid":"PBO:0027058"}


id: MONDO:0017391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Grayson-Wilbrandt corneal dystrophy (GWCD) is an extremely rare form of corneal dystrophy characterized by variable patterns of opacification in the Bowman layer of the cornea which extend anteriorly into the epithelium with decreased to normal visual acuity.","definition_xrefs":["Orphanet:293375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Grayson-Wilbrandt corneal dystrophy","secondary_identifiers":["icd11.foundation:1667542240","MEDGEN:931248","GARD:21167","SCTID:717286002","UMLS:C4305579"],"synonyms":[{"name":"GWCD","type":"exact"}],"termid":"MONDO:0017391","xrefs":{"Monarch":{"xref_id":"0017391"}}}


id: MONDO:0016238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solitary fibrous tumor (SFT) represents a diverse group of ubiquitous rare spindle cell neoplasms that may be benign or malignant and that most frequently arises from the pleura and peritoneum and rarely from other sites such as head and neck, liver and skeletal muscle. SFT may be clinically asymptomatic or may present with enlarging mass, compressive effects depending on the site involved and rarely with paraneoplastic manifestations (osteoarthropathy or hypoglycemia).","definition_xrefs":["Orphanet:2126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solitary fibrous tumor","secondary_identifiers":["ICDO:9051/0","ICD9:238.1","MESH:D006393","MedDRA:10018825","MEDGEN:224764","ONCOTREE:SFT","MESH:D054364","UMLS:C1266119","ICDO:8815/0","GARD:15014","NCIT:C7634","ICDO:8815/1"],"synonyms":[{"name":"SFT","type":"exact"},{"name":"hemangiopericytoma","type":"related"},{"name":"localised fibrous mesothelioma","type":"exact"},{"name":"localised fibrous tumour","type":"exact"},{"name":"localized fibrous mesothelioma","type":"exact"},{"name":"localized fibrous tumor","type":"exact"},{"name":"solitary fibrous tumor","type":"exact"},{"name":"solitary fibrous tumor/hemangiopericytoma","type":"related"},{"name":"submesothelial fibroma","type":"exact"}],"termid":"MONDO:0016238","xrefs":{"Monarch":{"xref_id":"0016238"}}}


id: PBO:0055804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidic acid receptor 6","termid":"PBO:0055804"}


id: MONDO:0025485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired defect of cellular immunity that occurs in cats infected with feline immunodeficiency virus (fiv) and in some cats infected with feline leukemia virus (Felv).","definition_xrefs":["MESH:D016181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cat disease","termid":"MONDO:0024912"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"},{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline acquired immunodeficiency syndrome","synonyms":[{"name":"AIDS, Feline","type":"related"},{"name":"FAIDS","type":"related"},{"name":"Feline AIDS","type":"related"},{"name":"Feline acquired immune deficiency syndrome","type":"related"},{"name":"Feline acquired immuno deficiency syndrome","type":"related"},{"name":"Feline acquired immuno-deficiency syndrome","type":"related"},{"name":"Feline immunodeficiency virus cat disease","type":"exact"},{"name":"Feline immunodeficiency virus caused cat disease","type":"exact"}],"termid":"MONDO:0025485","xrefs":{"Monarch":{"xref_id":"0025485"}}}


id: PBO:0038770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 8","termid":"PBO:0038770"}


id: MONDO:0958150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Borrelia infectious disease","termid":"MONDO:0006681"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Borrelia miyamotoi disease","secondary_identifiers":["DOID:0070527"],"termid":"MONDO:0958150","xrefs":{"Monarch":{"xref_id":"0958150"}}}


id: PBO:0066670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ripply transcriptional repressor 3","termid":"PBO:0066670"}


id: GO:0030776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline = S-adenosyl-L-homocysteine + N-methyl-(RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline.","definition_xrefs":["EC:2.1.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"(RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline N-methyltransferase activity","secondary_identifiers":["RHEA:13005","MetaCyc:2.1.1.115-RXN"],"synonyms":[{"name":"(RS)-tetrahydrobenzylisoquinoline N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:(RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline N-methyltransferase activity","type":"related"},{"name":"norreticuline N-methyltransferase activity","type":"related"}],"termid":"GO:0030776"}


id: PR:Q09830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G8.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C4G8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.04","synonyms":[{"name":"Spom972h-SPAC4G8.04","type":"exact"}],"termid":"PR:Q09830"}


id: FYPO:0006723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that normally moves away from Cdr2 medial cortical node complexes during a cellular response to osmotic stress instead remains predominantly in the nodes.","definition_xrefs":["PMID:28924043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress","synonyms":[{"name":"decreased protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0006723"}


id: PBO:0086997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reverse transcriptase required for splicing of the COX1 pre-mRNA; encoded by a mobile group II intron within the mitochondrial COX1 gene","termid":"PBO:0086997"}


id: GO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Dimethylation of the N6 amino groups of two consecutive adenosine residues near the 3'-end of the SSU rRNA. This process has been conserved from bacteria to eukaryotes.","definition_xrefs":["ISBN:1555811337","GOC:curators","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylation involved in SSU-rRNA maturation (obsolete GO:0000456)","termid":"GO:0000456"}


id: PBO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates agn1","termid":"PBO:0001956"}


id: MONDO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sporadic or less frequently familial neoplasm, arising from the glandular epithelium of the stomach, small intestine, biliary tract, colon, and rectum. It is a polypoid or flat circumscribed lesion. Morphologically, it is characterized by a proliferation of neoplastic glandular cells and it is associated with dysplasia. According to the growth pattern, it may be classified as tubular, villous, or tubulovillous. The dysplasia is classified as mild, moderate, or severe. The frequency of malignant transformation depends on the size of the lesion and the degree of dysplasia. Larger adenomas with severe dysplastic changes (sometimes called carcinoma in situ) carry a higher risk of progressing to invasive adenocarcinoma. Gastrointestinal adenomas may present as solitary or multifocal lesions. Familial adenomas tend to be multifocal and carry a higher risk of malignant transformation.","definition_xrefs":["NCIT:C36207"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digestive system adenoma","secondary_identifiers":["UMLS:C0948101","MEDGEN:184920","DOID:4147","EFO:1000217"],"synonyms":[{"name":"GI adenoma","type":"exact"},{"name":"digestive system adenoma","type":"exact"},{"name":"digestive tract adenoma","type":"exact"},{"name":"gastrointestinal adenoma","type":"exact"}],"termid":"MONDO:0006180","xrefs":{"Monarch":{"xref_id":"0006180"}}}


id: PBO:0040139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 2","termid":"PBO:0040139"}


id: MONDO:0024287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality of the arteries and veins, lymph vessels or veins and lymph vessels.","definition_xrefs":["NCIT:C112117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular malformation","termid":"MONDO:0024291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital vascular malformation","secondary_identifiers":["MEDGEN:743837","UMLS:C1961121"],"synonyms":[{"name":"congenital vascular malformation","type":"exact"},{"name":"vascular malformation","type":"broad"}],"termid":"MONDO:0024287","xrefs":{"Monarch":{"xref_id":"0024287"}}}


id: PBO:0072403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 8","termid":"PBO:0072403"}


id: GO:0016361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with activin-bound type II activin receptor to initiate a change in cell activity; upon binding, acts as a downstream transducer of activin signals.","definition_xrefs":["PMID:8622651","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin receptor activity","termid":"GO:0017002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016301","GO:0004672","GO:0003674","GO:0038023","GO:0003824"],"is_obsolete":false,"name":"activin receptor activity, type I","synonyms":[{"name":"type I activin receptor activity","type":"exact"}],"termid":"GO:0016361"}


id: MONDO:0010211
data:
  {"annotated_genes":["SJAG_01049","SJAG_01887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86994,86995],"is_not":false,"summary":null,"term":"MONDO:0010211"}]},"cv_name":"mondo","definition":"An autosomal recessive inherited disorder caused by mutations in the XPC gene. This disease is characterized by increased sensitivity to sunlight with the development of carcinomas at an early age and is caused by a defect in nucleotide excision repair.","definition_xrefs":["NCIT:C114770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0021190"],"is_obsolete":false,"name":"xeroderma pigmentosum group C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110844","MEDGEN:416702","OMIM:278720","Orphanet:276255","UMLS:C2752147","GARD:5626","SCTID:25784009","MESH:C567886"],"synonyms":[{"name":"XP group C","type":"exact"},{"name":"XP, Group C","type":"related"},{"name":"XP-C","type":"exact"},{"name":"XP3","type":"exact"},{"name":"XPC","type":"exact"},{"name":"XPCC","type":"exact"},{"name":"xeroderma pigmentosum 3","type":"related"},{"name":"xeroderma pigmentosum III","type":"exact"},{"name":"xeroderma pigmentosum group C","type":"exact"},{"name":"xeroderma pigmentosum group type C","type":"exact"},{"name":"xeroderma pigmentosum, complementation group C","type":"related"},{"name":"xeroderma pigmentosum, complementation group type C","type":"exact"},{"name":"xeroderma pigmentosum, group C","type":"exact"},{"name":"xeroderma pigmentosum, type 3","type":"related"}],"termid":"MONDO:0010211","terms_by_termid":{"MONDO:0010211":null},"xrefs":{"Monarch":{"xref_id":"0010211"}}}


id: PBO:0046572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 14","termid":"PBO:0046572"}


id: GO:2000048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell-cell adhesion mediated by cadherin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by cadherin","termid":"GO:2000047"},{"relation_name":"negatively_regulates","term_name":"cell-cell adhesion mediated by cadherin","termid":"GO:0044331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell-cell adhesion mediated by cadherin","termid":"GO:2000048"}


id: PR:Q9P7G6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tos4 gene.","definition_xrefs":["UniProtKB:Q9P7G6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor P14E8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP14E8.02","synonyms":[{"name":"Spom972h-tos4","type":"exact"}],"termid":"PR:Q9P7G6"}


id: FYPO:0006952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of N2-acetyl-L-lysine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular N2-acetyl-L-lysine level","synonyms":[{"name":"increased N2-acetyl-L-lysine accumulation","type":"related"},{"name":"increased cellular N2-acetyl-L-lysine level during mitotic cell cycle","type":"related"},{"name":"increased cellular N2-acetyl-L-lysine level during vegetative growth","type":"exact"},{"name":"increased cellular N2-acetyl-lysine level","type":"exact"}],"termid":"FYPO:0006952"}


id: FYPO:0005292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased during a cellular response to hydroxyurea. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased chromatin binding during cellular response to hydroxyurea","synonyms":[{"name":"increased chromatin binding during cellular response to HU","type":"exact"}],"termid":"FYPO:0005292"}


id: PBO:0004307
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of chaperonin-containing T-complex","termid":"PBO:0004307"}


id: PBO:0057359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ac","termid":"PBO:0057359"}


id: GO:0010203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low fluence red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Very low fluence red light is defined in this case as short pulses of red light followed by darkness, providing light levels of less than 0.001 mmol/m2/sec.","definition_xrefs":["GOC:mtg_far_red","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red light","termid":"GO:0010114"},{"relation_name":"is_a","term_name":"response to very low light intensity stimulus","termid":"GO:0055122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to very low fluence red light stimulus","termid":"GO:0010203"}


id: PBO:0052332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1755","termid":"PBO:0052332"}


id: MONDO:0016727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extraventricular neurocytoma (EVN), a variant of central neurocytoma, is a rare neuronal neoplasm, composed of round cells with neuronal differentiation, which is located outside of the ventricular system, usually within the spinal cord or cerebral hemispheres and that manifests with headache, nausea, vomiting, complex partial seizures or focal neurological deficits. In some cases it may exhibit atypical features consistent with aggressive clinical behavior.","definition_xrefs":["Orphanet:251927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extraventricular neurocytoma","secondary_identifiers":["GARD:20727","DOID:0081314","MEDGEN:457401","UMLS:C2985175","ONCOTREE:EVN","SCTID:716787002","ICDO:9506/1","NCIT:C92555"],"synonyms":[{"name":"EVN","type":"exact"},{"name":"extraventricular neurocytoma (WHO grade II)","type":"exact"}],"termid":"MONDO:0016727","xrefs":{"Monarch":{"xref_id":"0016727"}}}


id: PBO:0047181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 200 member B","termid":"PBO:0047181"}


id: PBO:0032758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase Pgs1 (predicted)","termid":"PBO:0032758"}


id: PBO:0060210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutY DNA glycosylase","termid":"PBO:0060210"}


id: MONDO:0005375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the nasopharynx. Representative examples of benign neoplasms include angiofibroma and squamous papilloma. Representative examples of malignant neoplasms include keratinizing squamous cell carcinoma and nonkeratinizing carcinoma.","definition_xrefs":["NCIT:C3257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasopharyngeal disorder","termid":"MONDO:0004821"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal neoplasm","secondary_identifiers":["MONDO:0021362","EFO:0004252","MESH:D009303","UMLS:C0027439","MEDGEN:6526","SCTID:126680004"],"synonyms":[{"name":"nasopharyngeal neoplasms","type":"exact"},{"name":"nasopharyngeal tumor","type":"exact"},{"name":"nasopharyngeal tumour","type":"exact"},{"name":"nasopharynx neoplasm","type":"exact"},{"name":"nasopharynx neoplasm (disease)","type":"exact"},{"name":"nasopharynx tumor","type":"exact"},{"name":"nasopharynx tumour","type":"exact"},{"name":"neoplasm of nasopharynx","type":"exact"},{"name":"neoplasm of the nasopharynx","type":"exact"},{"name":"tumor of nasopharynx","type":"exact"},{"name":"tumor of the nasopharynx","type":"exact"},{"name":"tumour of nasopharynx","type":"exact"},{"name":"tumour of the nasopharynx","type":"exact"}],"termid":"MONDO:0005375","xrefs":{"Monarch":{"xref_id":"0005375"}}}


id: GO:0030810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of nucleotide biosynthetic process","termid":"GO:0030808"},{"relation_name":"is_a","term_name":"positive regulation of nucleotide metabolic process","termid":"GO:0045981"},{"relation_name":"positively_regulates","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of nucleotide biosynthetic process","synonyms":[{"name":"activation of nucleotide biosynthetic process","type":"narrow"},{"name":"positive regulation of nucleotide anabolism","type":"exact"},{"name":"positive regulation of nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of nucleotide formation","type":"exact"},{"name":"positive regulation of nucleotide synthesis","type":"exact"},{"name":"stimulation of nucleotide biosynthetic process","type":"narrow"},{"name":"up regulation of nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of nucleotide biosynthetic process","type":"exact"}],"termid":"GO:0030810"}


id: PATO:0000534
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000534 p h sensitivity value (obsolete PATO:0000534)","termid":"PATO:0000534"}


id: PBO:0005773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane zinc transporter (predicted)","termid":"PBO:0005773"}


id: MOD:01860
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine bacillithiol disulfide.","definition_xrefs":["PubMed:19578333","ChEBI:61338","RESID:AA0563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine bacillithiol disulfide","synonyms":[{"name":"(2S)-(2-[S-(L-cystein-S-yl)-L-cysteinyl]amino-2-deoxy-alpha-D-glucopyranosyloxy)-butanedioic acid","type":"exact"},{"name":"BSH","type":"exact"},{"name":"L-cysteine bacillithiol disulfide","type":"exact"},{"name":"MOD_RES S-bacillithiol cysteine disulfide","type":"exact"}],"termid":"MOD:01860"}


id: PBO:0002812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Rrn10","termid":"PBO:0002812"}


id: PBO:0070639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 10","termid":"PBO:0070639"}


id: GO:0031462
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul2 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cul2-RING ubiquitin ligase complex","synonyms":[{"name":"CBC complex","type":"broad"},{"name":"CDL2 complex","type":"exact"},{"name":"CRL2 complex","type":"exact"},{"name":"EC2S complex","type":"broad"},{"name":"ECS complex","type":"broad"},{"name":"SCF2 complex","type":"related"},{"name":"VBC complex","type":"narrow"},{"name":"cullin-RING ligase 2","type":"exact"}],"termid":"GO:0031462"}


id: GO:0097373
data:
  {"annotated_genes":["SJAG_00857","SJAG_00884","SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106747,107559,115601],"is_not":false,"summary":null,"term":"GO:0097373"}]},"cv_name":"cellular_component","definition":"A protein complex that contains Mcm4, Mcm6, and Mcm7 proteins, and possesses DNA helicase activity. In the heterohexameric MCM complex, the Mcm4/6/7 proteins form a stable core, and Mcm2, Mcm3, and Mcm5 are more peripherally associated.","definition_xrefs":["PMID:10770926","GOC:mah","PMID:15007098","PMID:9305914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MCM core complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MCM4/6/7 complex","type":"exact"}],"termid":"GO:0097373","terms_by_termid":{"GO:0097373":null}}


id: GO:1903135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cupric ion, copper(2+).","definition_xrefs":["PMID:24567322","GOC:bf","GOC:TermGenie","GOC:PARL","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion binding","termid":"GO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0046872"],"is_obsolete":false,"name":"cupric ion binding","synonyms":[{"name":"Cu(2+) binding","type":"exact"},{"name":"Cu(II) binding","type":"exact"},{"name":"copper(2+)binding","type":"exact"}],"termid":"GO:1903135"}


id: PBO:0083869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein containing five copies of the WD40 motif; controls cell cycle function, sulfur metabolism, and methionine biosynthesis as part of the ubiquitin ligase complex; interacts with and regulates Met4p, localizes within the nucleus; dissociation of Met30p from SCF complex in response to cadmium stress is regulated by Cdc48p","termid":"PBO:0083869"}


id: GO:0043820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the irreversible NADH-dependent formation of propionyl-CoA from acryloyl-CoA.","definition_xrefs":["PMID:12603323"],"gene_count":0,"genotype_count":0,"name":"obsolete propionyl-CoA dehydrogenase activity (obsolete GO:0043820)","termid":"GO:0043820"}


id: PBO:0061260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like C","termid":"PBO:0061260"}


id: GO:0033941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2)-alpha-D- and (1->6)-alpha-D- linkages in mannan, releasing D-mannose.","definition_xrefs":["EC:3.2.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"mannan exo-1,2-1,6-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.137-RXN"],"synonyms":[{"name":"1,2-1,6-alpha-D-mannan D-mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,6-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033941"}


id: MONDO:0022869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coronary arteries congenital malformation (obsolete MONDO:0022869)","termid":"MONDO:0022869","xrefs":{"Monarch":{"xref_id":"0022869"}}}


id: PBO:0060580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 17, pseudogene","termid":"PBO:0060580"}


id: SO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TCS element is a (yeast) transcription factor binding site, bound by the TEA DNA binding domain (DBD) of transcription factors. The consensus site is CATTCC or CATTCT.","definition_xrefs":["PMID:1489142","PMID:20118212","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCS_element","synonyms":[{"name":"TCS element","type":"exact"},{"name":"TEA Consensus Sequence ","type":"exact"}],"termid":"SO:0002044"}


id: FYPO:0001413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfide (S2-, also called acid labile sulfide) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular sulfide level","termid":"FYPO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular sulfide level","synonyms":[{"name":"increased cellular acid labile sulfide level","type":"exact"},{"name":"increased cellular sulfide accumulation","type":"related"},{"name":"increased cellular sulfide ion level","type":"exact"},{"name":"increased cellular sulfide level during mitotic cell cycle","type":"related"},{"name":"increased cellular sulfide level during vegetative growth","type":"exact"},{"name":"increased cellular sulphide level","type":"exact"}],"termid":"FYPO:0001413"}


id: PBO:0013071
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia-Two Homolog","termid":"PBO:0013071"}


id: GO:0071109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior temporal gyrus over time, from its formation to the mature structure. The superior temporal gyrus is a portion of the cerebral cortex that extends from the lateral sulcus to the superior temporal sulcus.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:11484000","FMA:61905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior temporal gyrus development","termid":"GO:0071109"}


id: PBO:0116590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLYATL1 antisense RNA 1","termid":"PBO:0116590"}


id: PBO:0052172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 3","termid":"PBO:0052172"}


id: PBO:0083716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein involved in ER-plasma membrane tethering; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to plasma membrane (PM) and regulate PM phosphatidylinositol-4-phosphate (PI4P) levels by controlling access of Sac1p phosphatase to its substrate PI4P in the PM; contains 3 calcium and lipid binding domains; mRNA is targeted to bud; TCB2 has a paralog, TCB1, that arose from the whole genome duplication","termid":"PBO:0083716"}


id: GO:1902845
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102689],"is_not":false,"summary":null,"term":"GO:1902845"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic spindle elongation.","definition_xrefs":["GOC:TermGenie","PMID:23087209","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle elongation","termid":"GO:0000022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic spindle elongation","type":"exact"},{"name":"down regulation of spindle elongation during mitosis","type":"exact"},{"name":"down-regulation of mitotic spindle elongation","type":"exact"},{"name":"down-regulation of spindle elongation during mitosis","type":"exact"},{"name":"downregulation of mitotic spindle elongation","type":"exact"},{"name":"downregulation of spindle elongation during mitosis","type":"exact"},{"name":"inhibition of mitotic spindle elongation","type":"narrow"},{"name":"inhibition of spindle elongation during mitosis","type":"narrow"},{"name":"negative regulation of spindle elongation during mitosis","type":"exact"}],"termid":"GO:1902845","terms_by_termid":{"GO:1902845":null}}


id: MONDO:1012551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"caudal cruciate ligament disease, non-human animal","termid":"MONDO:1011971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caudal cruciate ligament disease, dog","secondary_identifiers":["OMIA:002463-9615"],"termid":"MONDO:1012551","xrefs":{"Monarch":{"xref_id":"1012551"}}}


id: GO:0032819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell activation","termid":"GO:0032816"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation","termid":"GO:0032817"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte proliferation","termid":"GO:0050671"},{"relation_name":"positively_regulates","term_name":"natural killer cell proliferation","termid":"GO:0001787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell proliferation","synonyms":[{"name":"activation of natural killer cell proliferation","type":"narrow"},{"name":"positive regulation of NK cell proliferation","type":"exact"},{"name":"stimulation of natural killer cell proliferation","type":"narrow"},{"name":"up regulation of natural killer cell proliferation","type":"exact"},{"name":"up-regulation of natural killer cell proliferation","type":"exact"},{"name":"upregulation of natural killer cell proliferation","type":"exact"}],"termid":"GO:0032819"}


id: PBO:0056999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 92a-2","termid":"PBO:0056999"}


id: PBO:0075791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 10 pseudogene 2","termid":"PBO:0075791"}


id: PBO:0074544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SND1 intronic transcript 1","termid":"PBO:0074544"}


id: GO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phenylethanolamine = S-adenosyl-L-homocysteine + N-methylphenylethanolamine.","definition_xrefs":["EC:2.1.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"phenylethanolamine N-methyltransferase activity","secondary_identifiers":["RHEA:12176","Reactome:R-HSA-209903","MetaCyc:2.1.1.28-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:phenylethanolamine N-methyltransferase activity","type":"related"},{"name":"noradrenalin N-methyltransferase activity","type":"related"},{"name":"noradrenaline N-methyltransferase activity","type":"related"},{"name":"norepinephrine N-methyltransferase activity","type":"related"},{"name":"norepinephrine methyltransferase activity","type":"related"},{"name":"phenethanolamine N-methyltransferase activity","type":"related"},{"name":"phenethanolamine methyltransferase activity","type":"related"}],"termid":"GO:0004603"}


id: PBO:0049887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 6","termid":"PBO:0049887"}


id: PBO:0089069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone demethylase subunit Msc1","termid":"PBO:0089069"}


id: MONDO:0011549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the APCDD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hypotrichosis simplex","termid":"MONDO:0018914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 1","secondary_identifiers":["UMLS:C4551976","DOID:0110698","OMIM:605389","MEDGEN:1644234"],"synonyms":[{"name":"APCDD1 hypotrichosis","type":"exact"},{"name":"HHS","type":"broad"},{"name":"HTS","type":"exact"},{"name":"HYPT1","type":"exact"},{"name":"hereditary generalised hypotrichosis simplex","type":"exact"},{"name":"hereditary generalized hypotrichosis simplex","type":"exact"},{"name":"hypotrichosis 1","type":"exact"},{"name":"hypotrichosis caused by mutation in APCDD1","type":"exact"},{"name":"hypotrichosis simplex, generalized, hereditary","type":"related"},{"name":"hypotrichosis type 1","type":"exact"}],"termid":"MONDO:0011549","xrefs":{"Monarch":{"xref_id":"0011549"}}}


id: GO:2001225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chloride transport.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic anion transport","termid":"GO:0044070"},{"relation_name":"regulates","term_name":"chloride transport","termid":"GO:0006821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of chloride transport","termid":"GO:2001225"}


id: PBO:0035838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_along_microtubule_to_cell_tip_during_vegetative_growth","termid":"PBO:0035838"}


id: MONDO:0014670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ADGRG6 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 9","secondary_identifiers":["MEDGEN:903881","OMIM:616503","UMLS:C4225303"],"synonyms":[{"name":"ADGRG6 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS9","type":"related"},{"name":"lethal congenital contracture syndrome 9","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ADGRG6","type":"exact"},{"name":"lethal congenital contracture syndrome type 9","type":"exact"}],"termid":"MONDO:0014670","xrefs":{"Monarch":{"xref_id":"0014670"}}}


id: PATO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being unseparated into parts or divisions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undivided","synonyms":[{"name":"unseparated","type":"related"}],"termid":"PATO:0002034"}


id: PATO:0000597
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000597 absolute width value (obsolete PATO:0000597)","termid":"PATO:0000597"}


id: PBO:0058763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6887","termid":"PBO:0058763"}


id: GO:1901705
data:
  {"annotated_genes":["SJAG_00107","SJAG_04098","SJAG_06635","SJAG_04149","SJAG_03985","SJAG_00396","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91009,103614,104095,108638,110762,111426,113584],"is_not":false,"summary":null,"term":"GO:1901705"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-isoleucine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"},{"relation_name":"is_a","term_name":"isoleucine biosynthetic process","termid":"GO:0009097"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-isoleucine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine anabolism","type":"exact"},{"name":"L-isoleucine biosynthesis","type":"exact"},{"name":"L-isoleucine formation","type":"exact"},{"name":"L-isoleucine synthesis","type":"exact"}],"termid":"GO:1901705","terms_by_termid":{"GO:1901705":null}}


id: PBO:0027335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pre-replicative_complex_assembly","termid":"PBO:0027335"}


id: PBO:0072797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 3","termid":"PBO:0072797"}


id: PBO:0055352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2781","termid":"PBO:0055352"}


id: PATO:0001416
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration which has regular start and/or end times.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regular duration","termid":"PATO:0001416"}


id: SO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_hydroxynorvalyl_carbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine","secondary_identifiers":["RNAMOD:015"],"synonyms":[{"name":"2-methylthio-N6-hydroxynorvalyl carbamoyladenosine","type":"exact"},{"name":"ms2hn6A","type":"exact"},{"name":"two methylthio N6 hydroxynorvalyl carbamoyladenosine","type":"exact"}],"termid":"SO:0001309"}


id: GO:1990872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of sterol import, by down regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:rb","PMID:19793923"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sterol import by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1990872)","synonyms":[{"name":"negative regulation of sterol import by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"negative regulation of sterol import by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1990872"}


id: GO:0019695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonium ion metabolic process","termid":"GO:0097164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline metabolic process","synonyms":[{"name":"choline metabolism","type":"exact"}],"termid":"GO:0019695"}


id: MOD:00424
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-pyridylethyl-L-cysteine.","definition_xrefs":["OMSSA:112","PubMed:11760118","PubMed:8783016","PubMed:8297018","Unimod:31#C","PubMed:626389","DeltaMass:253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-pyridylethyl-L-cysteine","synonyms":[{"name":"PECys","type":"exact"},{"name":"Pyridylethyl","type":"related"},{"name":"Pyridylethyl Cystenyl","type":"exact"},{"name":"S-pyridinylethyl-L-cysteine","type":"exact"},{"name":"S-pyridylethylation","type":"related"},{"name":"spyridylethylc","type":"exact"},{"name":"vinylpyridine derivatized cysteine residue","type":"exact"}],"termid":"MOD:00424"}


id: PBO:0072298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 16","termid":"PBO:0072298"}


id: PBO:0074040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A24 pseudogene 1","termid":"PBO:0074040"}


id: PBO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32 (predicted)","termid":"PBO:0002042"}


id: MONDO:0019471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral (mature) T-cell neoplasm linked to the human T-cell leukemia virus type 1 (HTLV-1), adult T-cell leukemia/lymphoma is endemic in several regions of the world, in particular Japan, the Caribbean, and parts of Central Africa.","definition_xrefs":["NCIT:C3184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult lymphoma","termid":"MONDO:0003660"},{"relation_name":"is_a","term_name":"T-cell leukemia","termid":"MONDO:0005525"},{"relation_name":"is_a","term_name":"human T-lymphotropic virus 1 infectious disease","termid":"MONDO:0005801"},{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"},{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"},{"relation_name":"is_a","term_name":"deltaretrovirus infections","termid":"MONDO:0021184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"adult T-cell leukemia/lymphoma","secondary_identifiers":["GARD:19076","Orphanet:86875","ONCOTREE:ATLL","MedDRA:10001413","SCTID:110007008","ICDO:9827/3","icd11.foundation:430573082","MEDGEN:44128","ICD9:204.80","UMLS:C0023493","DOID:0050523"],"synonyms":[{"name":"ATLL","type":"exact"},{"name":"HTLV-1 associated adult T-cell lymphoma/leukemia","type":"related"},{"name":"HTLV-I associated adult T-cell leukemia/lymphoma","type":"related"},{"name":"T-cell leukaemia of adults","type":"exact"},{"name":"T-cell leukemia of adults","type":"exact"},{"name":"adult T cell lymphoma/leukemia","type":"related"},{"name":"adult T-cell leukaemia","type":"exact"},{"name":"adult T-cell leukemia","type":"exact"},{"name":"adult T-cell leukemia/lymphoma","type":"exact"},{"name":"adult T-cell leukemia/lymphoma (HTLV-1 positive)","type":"related"},{"name":"adult T-cell lymphoma","type":"related"},{"name":"adult T-cell lymphoma/leukemia","type":"related"}],"termid":"MONDO:0019471","xrefs":{"Monarch":{"xref_id":"0019471"}}}


id: PBO:0057760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1973","termid":"PBO:0057760"}


id: MONDO:0016080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital respiratory-biliary fistula (RBF) is a rare developmental defect characterized by an anomalous connection of trachea or bronchus with left hepatic duct presenting with respiratory distress, recurrent respiratory infections and biliary expectoration or vomitus.","definition_xrefs":["Orphanet:2040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bronchobiliary fistula","secondary_identifiers":["UMLS:C4304716","icd11.foundation:420429663","GARD:1475","MEDGEN:930385","SCTID:719452004"],"termid":"MONDO:0016080","xrefs":{"Monarch":{"xref_id":"0016080"}}}


id: PBO:0117098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB27B antisense RNA 1","termid":"PBO:0117098"}


id: GO:0089718
data:
  {"annotated_genes":["SJAG_04718","SJAG_03591","SJAG_00991","SJAG_04637","SJAG_02605","SJAG_03970","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[100683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[88410],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[110867,92065,99200,93657],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[92066,93658,99201],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[93659],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[100676,101537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"}]},"cv_name":"biological_process","definition":"The directed movement of an amino acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:krc","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"amino acid import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044745","GO:1902837","GO:0043092"],"synonyms":[{"name":"L-amino acid import","type":"broad"},{"name":"L-amino acid uptake","type":"narrow"},{"name":"amino acid import into cell","type":"exact"},{"name":"amino acid transmembrane import","type":"broad"}],"termid":"GO:0089718","terms_by_termid":{"GO:0097638":null,"GO:0097639":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null}}


id: GO:0097119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering process in which postsynaptic density protein 95 (PSD-95) molecules are localized to distinct domains in the cell membrane. PSD-95 is mostly located in the post synaptic density of neurons, and is involved in anchoring synaptic proteins.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:10433269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"part_of","term_name":"postsynaptic membrane organization","termid":"GO:0001941"},{"relation_name":"part_of","term_name":"postsynaptic density organization","termid":"GO:0097106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"postsynaptic density protein 95 clustering","synonyms":[{"name":"Dlg4 clustering","type":"exact"},{"name":"PSD-95 clustering","type":"exact"},{"name":"post-synaptic density protein 95 clustering","type":"exact"}],"termid":"GO:0097119"}


id: FYPO:0002837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small interfering RNA transcripts derived from the centromere outer repeat region measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric outer repeat transcript level","termid":"FYPO:0002567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal centromeric outer repeat transcript-derived siRNA level","synonyms":[{"name":"normal accumulation of centromeric outer repeat transcript-derived siRNA","type":"related"},{"name":"normal accumulation of centromeric outer repeat transcript-derived siRNA during vegetative growth","type":"related"},{"name":"normal accumulation of siRNAs homologous to outer repeats","type":"related"},{"name":"normal centromeric outer repeat transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"normal centromeric outer repeat transcript-derived siRNA level during vegetative growth","type":"exact"},{"name":"normal level of siRNAs homologous to outer repeats","type":"exact"}],"termid":"FYPO:0002837"}


id: PBO:0056242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog 3, pseudogene","termid":"PBO:0056242"}


id: PBO:0044608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 12 like 2","termid":"PBO:0044608"}


id: FYPO:0003822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a ribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased ribonuclease activity","synonyms":[{"name":"reduced ribonuclease activity","type":"exact"}],"termid":"FYPO:0003822"}


id: GO:0050269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl aldehyde + H2O + NAD(P)+ = ferulate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"coniferyl-aldehyde dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:RXN-1241"],"synonyms":[{"name":"coniferyl aldehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050269"}


id: MOD:01422
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a threonine hydroxyl with the carbonyl of the preceding residue to form a 5-methyloxazole or 5-methyloxazoline ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues","termid":"MOD:01419"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/oxazoline ring crosslinked residues (Thr)","termid":"MOD:01422"}


id: PBO:0042461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 3","termid":"PBO:0042461"}


id: MONDO:0035001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder of the visual organs (obsolete MONDO:0035001)","secondary_identifiers":["Orphanet:520814"],"termid":"MONDO:0035001","xrefs":{"Monarch":{"xref_id":"0035001"}}}


id: PBO:0047264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 245 member A","termid":"PBO:0047264"}


id: MONDO:0014208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease type 2 in which the cause of the disease is a mutation in the TRIM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2R","secondary_identifiers":["DOID:0110161","OMIM:615490","UMLS:C3809655","MEDGEN:815985","GARD:12451","Orphanet:397968"],"synonyms":[{"name":"CMT2R","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in TRIM2","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2R","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2R","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2R","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2R","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2R","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2R","type":"related"},{"name":"TRIM2 Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2R","type":"exact"}],"termid":"MONDO:0014208","xrefs":{"Monarch":{"xref_id":"0014208"}}}


id: PBO:0081715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 641","termid":"PBO:0081715"}


id: MONDO:0022633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly joint contractures and facial skeletal dysplasia","secondary_identifiers":["UMLS:C2931678","MEDGEN:419868","MESH:C537969"],"termid":"MONDO:0022633","xrefs":{"Monarch":{"xref_id":"0022633"}}}


id: PBO:0111338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATP-dependent RNA helicase Has1","termid":"PBO:0111338"}


id: PBO:0077343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 82","termid":"PBO:0077343"}


id: PBO:0042275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8 like 1, pseudogene","termid":"PBO:0042275"}


id: GO:0102332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: malonyl-CoA + H+ + a long-chain acyl-[acp] + a reduced electron acceptor = 2 carbon dioxide + coenzyme A + a terminal olefin + a holo-[acyl-carrier protein] + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete fatty-acyl-[acp] elongase/decarboxylase activity (obsolete GO:0102332)","termid":"GO:0102332"}


id: PR:P87048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10943:SF1","PRO:DNx","OMA:SCHPO03448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.03c","secondary_identifiers":["UniProtKB:P87048"],"synonyms":[{"name":"19S regulatory cap region of 26S protease subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PSMD2","type":"exact"},{"name":"proteasome non-ATPase subunit mts4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87048"}


id: PBO:0046832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 5","termid":"PBO:0046832"}


id: FYPO:0001960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase II activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal DNA topoisomerase II activity","synonyms":[{"name":"abnormal DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","type":"exact"}],"termid":"FYPO:0001960"}


id: PBO:0113399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine hydrolase; likely target of Cyc8p-Tup1p-Rfx1p transcriptional regulation; localizes to cytosol and peroxisomes; similar to S. cerevisiae Fsh1p and Fsh2p and the human candidate tumor suppressor OVCA2","termid":"PBO:0113399"}


id: PR:G2TRN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC750.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl-alcohol dehydrogenase C750.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC750.01","synonyms":[{"name":"Spom972h-SPAC750.01","type":"exact"}],"termid":"PR:G2TRN6"}


id: PBO:0090922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex beta subunit Tfg2","termid":"PBO:0090922"}


id: MONDO:0003411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangiopericytoma arising from the breast.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast hemangiopericytoma","secondary_identifiers":["UMLS:C1511313","NCIT:C40396","MEDGEN:267766","DOID:5370"],"synonyms":[{"name":"breast hemangiopericytoma","type":"exact"},{"name":"breast spindle cell tumor","type":"exact"},{"name":"breast spindle cell tumour","type":"exact"}],"termid":"MONDO:0003411","xrefs":{"Monarch":{"xref_id":"0003411"}}}


id: PBO:0086526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YCR025C is not an essential gene","termid":"PBO:0086526"}


id: MOD:02053
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-phenylalanine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-phenylalanine residue","synonyms":[{"name":"XlnkPhe","type":"exact"}],"termid":"MOD:02053"}


id: GO:0010432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bract over time, from its formation to the mature structure. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence.","definition_xrefs":["PMID:16554366","PO:0009055","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bract development","termid":"GO:0010432"}


id: PBO:0057292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 510","termid":"PBO:0057292"}


id: PBO:0070675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 46","termid":"PBO:0070675"}


id: PBO:0073141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B4, pseudogene","termid":"PBO:0073141"}


id: PBO:0042375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200R1L antisense RNA 1","termid":"PBO:0042375"}


id: PBO:0058011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3937","termid":"PBO:0058011"}


id: PBO:0110403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion protein (Kanno blood group)","termid":"PBO:0110403"}


id: PBO:0050486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXB cluster antisense RNA 1","termid":"PBO:0050486"}


id: PBO:0073236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1","termid":"PBO:0073236"}


id: GO:0072030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a short nephron over time, from its formation to the mature structure. Short nephrons are associated with mid-cortical and superficial glomeruli, are situated entirely in the outer medulla, and have no thin ascending limb.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short nephron development","termid":"GO:0072030"}


id: PBO:0030252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_trehalose_level","termid":"PBO:0030252"}


id: GO:0032375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sterol transport","termid":"GO:0032372"},{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"negatively_regulates","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholesterol transport","synonyms":[{"name":"down regulation of cholesterol transport","type":"exact"},{"name":"down-regulation of cholesterol transport","type":"exact"},{"name":"downregulation of cholesterol transport","type":"exact"},{"name":"inhibition of cholesterol transport","type":"narrow"}],"termid":"GO:0032375"}


id: FYPO:0000758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bismuth ions. Cells stop growing (and may die) at a concentration of bismuth that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to bismuth","synonyms":[{"name":"hypersensitive to bismuth","type":"exact"},{"name":"sensitive to bismuth during mitotic cell cycle","type":"related"},{"name":"sensitive to bismuth during vegetative growth","type":"exact"},{"name":"sensitive to bismuth ions","type":"exact"}],"termid":"FYPO:0000758"}


id: GO:0003974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-galactosamine.","definition_xrefs":["EC:5.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine 4-epimerase activity","secondary_identifiers":["MetaCyc:UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN","RHEA:20517"],"synonyms":[{"name":"UDP acetylglucosamine epimerase activity","type":"related"},{"name":"UDP-GlcNAc 4-epimerase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine 4-epimerase activity","type":"related"},{"name":"uridine 5'-diphospho-N-acetylglucosamine-4-epimerase activity","type":"related"},{"name":"uridine diphosphate N-acetylglucosamine-4-epimerase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine epimerase activity","type":"related"}],"termid":"GO:0003974"}


id: GO:0035919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a low voltage-gated calcium channel in another organism. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:fj","PMID:20920515","GOC:bf","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of low voltage-gated calcium channel activity in another organism (obsolete GO:0035919)","synonyms":[{"name":"down-regulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"downregulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"inhibition of low voltage-gated calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of low voltage gated calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-dependent calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035919"}


id: PATO:0000962
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000962 absolute opacity value (obsolete PATO:0000962)","termid":"PATO:0000962"}


id: GO:0039567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT1 (signal transducer and activator of transcription-1) activity by retaining STAT1 in the cytoplasm, so STAT1 is unable to translocate to the nucleus to activate transcription of its target genes.","definition_xrefs":["PMID:16254375","PMID:17287281","PMID:14557668"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT1 activity by negative regulation of STAT protein import into nucleus (obsolete GO:0039567)","synonyms":[{"name":"cytoplasmic sequestration of STAT1","type":"broad"},{"name":"suppression by virus of host STAT1 activity by cytoplasmic sequestering of STAT1","type":"exact"}],"termid":"GO:0039567"}


id: GO:0106310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate.","definition_xrefs":["RHEA:17989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0004672","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"protein serine kinase activity","secondary_identifiers":["Reactome:R-HSA-9821982","Reactome:R-HSA-9860792","Reactome:R-HSA-9841265","Reactome:R-HSA-9860808","Reactome:R-HSA-9729330","Reactome:R-HSA-9821967"],"synonyms":[{"name":"protein-serine kinase activity","type":"exact"}],"termid":"GO:0106310"}


id: MONDO:0005774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from infection by Burkholderia mallei, which mainly affects horses.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"burkholderia infectious disease","termid":"MONDO:0043953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glanders","secondary_identifiers":["icd11.foundation:1563156715","ICD9:024","MESH:D005896","MEDGEN:42221","DOID:13444","SCTID:4639008","UMLS:C0017589","ICD10CM:A24.0","EFO:0007286","NCIT:C34638","Orphanet:659908"],"synonyms":[{"name":"Burkholderia mallei","type":"related"},{"name":"Burkholderia mallei caused disease or disorder","type":"exact"},{"name":"Burkholderia mallei disease or disorder","type":"exact"},{"name":"Burkholderia mallei infection","type":"related"},{"name":"Burkholderia mallei infectious disease","type":"exact"},{"name":"farcy pipes","type":"exact"},{"name":"infection due to Pseudomonas mallei","type":"exact"}],"termid":"MONDO:0005774","xrefs":{"Monarch":{"xref_id":"0005774"}}}


id: GO:0019521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-gluconate metabolic process","synonyms":[{"name":"D-gluconate metabolism","type":"exact"}],"termid":"GO:0019521"}


id: PBO:0040939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 10","termid":"PBO:0040939"}


id: GO:0010494
data:
  {"annotated_genes":["SJAG_04480","SJAG_02592","SJAG_03276","SJAG_01512","SJAG_03762","SJAG_02628","SJAG_00686","SJAG_02164","SJAG_03214","SJAG_03157","SJAG_01479","SJAG_01954","SJAG_05010","SJAG_02263","SJAG_02573","SJAG_04640","SJAG_04427","SJAG_03424","SJAG_00474","SJAG_16454","SJAG_04772","SJAG_01159","SJAG_03498","SJAG_03023","SJAG_04342","SJAG_05694","SJAG_02239","SJAG_00391","SJAG_00507","SJAG_16457","SJAG_03277","SJAG_03283","SJAG_04744","SJAG_02419","SJAG_00544","SJAG_02663","SJAG_02995","SJAG_01548","SJAG_01026","SJAG_04672","SJAG_01317","SJAG_03696","SJAG_01650","SJAG_01222"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70891,72878,73326,74293,74992,76977,79269,79708,87835,88675,89475,89805,90017,90223,90514,90590,90632,90643,90680,91870,92874,93336,93337,94684,94875,94876,95109,96403,97428,98107,99246,100250,105530,105640,105900,105993,105994,107263,110205,110307,111399,113653,113948,117612],"is_not":false,"summary":null,"term":"GO:0010494"}]},"cv_name":"cellular_component","definition":"A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.","definition_xrefs":["PMID:17601829","GOC:ans","PMID:20368989","PMID:17967451","PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00391":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_01026":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01650":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02663":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03498":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_04342":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic stress granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Stress_granule"],"synonyms":[{"name":"cytoplasmic mRNP granule","type":"exact"},{"name":"stress granule","type":"exact"}],"termid":"GO:0010494","terms_by_termid":{"GO:0010494":null}}


id: PBO:0048454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain containing 1","termid":"PBO:0048454"}


id: MONDO:0011570
data:
  {"annotated_genes":["SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85827],"is_not":false,"summary":null,"term":"MONDO:0011570"}]},"cv_name":"mondo","definition":"Charcot-Marie-Tooth disease, type 2B2 (CMT2B2, also referred to as CMT4C3) is an axonal CMT peripheral sensorimotor polyneuropathy that has been described in a large consanguineous Costa Rican family of Spanish ancestry.","definition_xrefs":["Orphanet:101101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2B2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:381352","MESH:C537991","GARD:1249","UMLS:C1854150","DOID:0110179","icd11.foundation:2009111705","OMIM:605589","SCTID:719981005"],"synonyms":[{"name":"AR-CMT2B2","type":"exact"},{"name":"ARCMT2B","type":"exact"},{"name":"Arcmt2B","type":"related"},{"name":"CMT 2B2","type":"related"},{"name":"CMT2B2","type":"exact"},{"name":"Charcot Marie Tooth disease type 2B2","type":"related"},{"name":"Charcot-Marie-Tooth disease neuronal type 2B2","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in MED25","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2B2","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, B2","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2B2","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2B2","type":"related"},{"name":"Charcot-Marie-Tooth disease, neuronal, type 2B2","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2B2","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2B2","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2B2","type":"related"},{"name":"MED25 Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal recessive axonal CMT4C3","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2B2","type":"exact"}],"termid":"MONDO:0011570","terms_by_termid":{"MONDO:0011570":null},"xrefs":{"Monarch":{"xref_id":"0011570"}}}


id: GO:0047010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,3R,4S)-3,4-dihydroxycyclohexane-1-carboxylate + NAD+ = (1S,4S)-4-hydroxy-3-oxocyclohexane-1-carboxylate + H+ + NADH.","definition_xrefs":["RHEA:10516","EC:1.1.1.166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydroxycyclohexanecarboxylate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05315","MetaCyc:1.1.1.166-RXN"],"synonyms":[{"name":"(-)t-3,t-4-dihydroxycyclohexane-c-1-carboxylate-NAD oxidoreductase activity","type":"related"},{"name":"(1S,3R,4S)-3,4-dihydroxycyclohexane-1-carboxylate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"dihydroxycyclohexanecarboxylate dehydrogenase activity","type":"related"}],"termid":"GO:0047010"}


id: PBO:0076058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stonin 1","termid":"PBO:0076058"}


id: MONDO:1011744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous and renal vasculopathy, non-human animal","secondary_identifiers":["OMIA:001220"],"termid":"MONDO:1011744","xrefs":{"Monarch":{"xref_id":"1011744"}}}


id: GO:0030944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a KDEL sequence, the C terminus tetrapeptide sequence Asp-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER retention sequence binding","termid":"GO:0046923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005048","GO:0003674"],"is_obsolete":false,"name":"DDEL sequence binding","termid":"GO:0030944"}


id: PBO:0038731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 2, smooth muscle","termid":"PBO:0038731"}


id: GO:0034729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to lysine at position 79 of the histone.","definition_xrefs":["GOC:se"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K79 methylation (obsolete GO:0034729)","synonyms":[{"name":"histone H3 K79 methylation","type":"exact"},{"name":"histone H3K79me","type":"exact"},{"name":"histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:0034729"}


id: PBO:0005467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinase B inhibitor Pbi2 (predicted)","termid":"PBO:0005467"}


id: PBO:0005454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb2 (predicted)","termid":"PBO:0005454"}


id: PBO:0069090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 337, pseudogene","termid":"PBO:0069090"}


id: PBO:0049698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan and proteoglycan link protein 4","termid":"PBO:0049698"}


id: PBO:0026857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_glucose_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0026857"}


id: MONDO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nerve plexus disease that involves the lumbosacral nerve plexus.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve plexus disorder","termid":"MONDO:0024432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"lumbosacral plexus lesion","secondary_identifiers":["SCTID:4062006","ICD9:353.1","UMLS:C0154735","DOID:13913","MEDGEN:509637"],"synonyms":[{"name":"lumbosacral nerve plexus nerve plexus disease","type":"exact"},{"name":"lumbosacral plexus lesions","type":"exact"},{"name":"nerve plexus disease of lumbosacral nerve plexus","type":"exact"}],"termid":"MONDO:0001829","xrefs":{"Monarch":{"xref_id":"0001829"}}}


id: PBO:0049455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1","termid":"PBO:0049455"}


id: FYPO:0003882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of cyclosporin A binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased cyclosporin A binding","termid":"FYPO:0003882"}


id: GO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A growth factor that binds selectively and non-covalently to glial cell-derived neurotrophic factor receptors.","definition_xrefs":["GOC:vw","PMID:11476867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor binding","synonyms":[{"name":"glial cell line-derived neurotrophic factor receptor binding","type":"related"},{"name":"glial cell line-derived neurotrophic factor receptor ligand","type":"narrow"}],"termid":"GO:0030116"}


id: GO:0016597
data:
  {"annotated_genes":["SJAG_03861","SJAG_00635","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59486,67759],"is_not":false,"summary":null,"term":"GO:0016597"},{"annotations":[74532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016594"}]},"cv_name":"molecular_function","definition":"Binding to an amino acid, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00635":null,"SJAG_00964":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"amino acid binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0016597","terms_by_termid":{"GO:0016594":null,"GO:0016597":null}}


id: MOD:00504
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine.","definition_xrefs":["PubMed:1386601","PubMed:6436247","PubMed:11955007","PubMed:11955008","Unimod:135#G","OMSSA:79","RESID:AA0059#var","PubMed:7543369","PubMed:1326520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine","synonyms":[{"name":"(cis,cis-delta 5, delta 8)-tetradecadienoyl","type":"related"},{"name":"Myristoyl+Delta:H(-4)","type":"related"},{"name":"N-(C14:2 aliphatic acyl)glycine","type":"exact"},{"name":"myristoylation-4H (two double bonds)","type":"exact"},{"name":"ntermpepmyristoyl4hg","type":"exact"}],"termid":"MOD:00504"}


id: FYPO:0007413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the telomere is abnormal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology","termid":"FYPO:0006508"},{"relation_name":"output_of","term_name":"abnormal telomere maintenance during G0","termid":"FYPO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal telomere morphology during G0","synonyms":[{"name":"abnormal chromosome morphology at telomere during G0","type":"exact"},{"name":"abnormal chromosome morphology at telomeric region during G0","type":"exact"},{"name":"abnormal telomere morphology during cell quiescence","type":"exact"},{"name":"abnormal telomere morphology during quiescence","type":"exact"},{"name":"abnormal telomeric region morphology during G0","type":"exact"}],"termid":"FYPO:0007413"}


id: GO:0072040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in morphogenesis","termid":"GO:1902338"},{"relation_name":"is_a","term_name":"negative regulation of somatic stem cell population maintenance","termid":"GO:1904673"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell apoptotic process","termid":"GO:2001054"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","synonyms":[{"name":"negative regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis","type":"narrow"},{"name":"negative regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis","type":"exact"}],"termid":"GO:0072040"}


id: PR:Q9URX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC922.05c gene.","definition_xrefs":["UniProtKB:Q9URX1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC93-like protein C922.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.05c","synonyms":[{"name":"Spom972h-SPAC922.05c","type":"exact"}],"termid":"PR:Q9URX1"}


id: PBO:0028656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-S-shaped_cell","termid":"PBO:0028656"}


id: GO:0048906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an anterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast support cell differentiation","termid":"GO:0048889"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast support cell differentiation","termid":"GO:0048906"}


id: GO:0062177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the radial spoke, a protein complex that links the outer microtubule doublet of the ciliary or flagellum axoneme with the sheath that surrounds the central pair of microtubules.","definition_xrefs":["PMID:24124175","PMID:27940518","PMID:21613541","PMID:8408197","PMID:21692193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"radial spoke assembly","termid":"GO:0062177"}


id: GO:0005577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly soluble, elongated protein complex found in blood plasma and involved in clot formation. It is converted into fibrin monomer by the action of thrombin. In the mouse, fibrinogen is a hexamer, 46 nm long and 9 nm maximal diameter, containing two sets of nonidentical chains (alpha, beta, and gamma) linked together by disulfide bonds.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"fibrinogen complex","synonyms":[{"name":"fibrinogen","type":"exact"},{"name":"fibrinogen alpha chain","type":"narrow"},{"name":"fibrinogen beta chain","type":"narrow"},{"name":"fibrinogen gamma chain","type":"narrow"}],"termid":"GO:0005577"}


id: PR:U3H0P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:U3H0P2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.06c","synonyms":[{"name":"Spom972h-wtf25","type":"exact"}],"termid":"PR:U3H0P2"}


id: MONDO:0010870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A distal myopathy characterized by weakness of the muscles of the anterior compartment of lower limbs, appearing in the fourth to seventh decade of life.","definition_xrefs":["Orphanet:609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"},{"relation_name":"is_a","term_name":"autosomal dominant titinopathy","termid":"MONDO:0100494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"tibial muscular dystrophy","secondary_identifiers":["GARD:13154","DOID:0111078","MEDGEN:333047","OMIM:600334","SCTID:698846009","UMLS:C1838244"],"synonyms":[{"name":"Finnish tibial muscular dystrophy","type":"exact"},{"name":"TMD","type":"exact"},{"name":"Tmd","type":"related"},{"name":"Udd myopathy","type":"exact"},{"name":"Udd type distal myopathy","type":"exact"},{"name":"distal myopathy, Udd type","type":"exact"},{"name":"distal titinopathy","type":"exact"},{"name":"tardive tibial muscular dystrophy","type":"exact"},{"name":"tibial muscular dystrophy, tardive","type":"related"}],"termid":"MONDO:0010870","xrefs":{"Monarch":{"xref_id":"0010870"}}}


id: SO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified threonine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_threonine","secondary_identifiers":["MOD:00917"],"synonyms":[{"name":"ModThr","type":"exact"},{"name":"modified L threonine","type":"exact"},{"name":"modified L-threonine","type":"exact"}],"termid":"SO:0001392"}


id: GO:0047708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biotin amide + H2O = biotin + NH3.","definition_xrefs":["MetaCyc:BIOTINIDASE-RXN","EC:3.5.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"biotinidase activity","secondary_identifiers":["Reactome:R-HSA-3076905","RHEA:13081","Reactome:R-HSA-4167509","Reactome:R-HSA-4225086","Reactome:R-HSA-3325540"],"synonyms":[{"name":"amidohydrolase biotinidase activity","type":"related"},{"name":"biotin-amide amidohydrolase activity","type":"related"}],"termid":"GO:0047708"}


id: GO:0050353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + N(6),N(6),N(6)-trimethyl-L-lysine + O2 = 3-hydroxy-N(6),N(6),N(6)-trimethyl-L-lysine + CO2 + succinate.","definition_xrefs":["EC:1.14.11.8","RHEA:14181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"trimethyllysine dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03451","MetaCyc:TRIMETHYLLYSINE-DIOXYGENASE-RXN","Reactome:R-HSA-71241"],"synonyms":[{"name":"6-N,6-N,6-N-trimethyl-L-lysine,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"N6,N6,N6-trimethyl-L-lysine,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"TML dioxygenase activity","type":"related"},{"name":"TML hydroxylase activity","type":"related"},{"name":"TML-alpha-ketoglutarate dioxygenase activity","type":"related"},{"name":"TMLD activity","type":"related"},{"name":"epsilon-trimethyllysine 2-oxoglutarate dioxygenase activity","type":"related"},{"name":"trimethyllysine alpha-ketoglutarate dioxygenase activity","type":"related"},{"name":"trimethyllysine,2-oxoglutarate dioxygenase activity","type":"related"}],"termid":"GO:0050353"}


id: MONDO:0015309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Auriculocondylar syndrome (obsolete MONDO:0015309)","termid":"MONDO:0015309","xrefs":{"Monarch":{"xref_id":"0015309"}}}


id: PBO:0033780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0033780"}


id: PBO:0002803
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart disease","termid":"PBO:0002803"}


id: GO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: blasticidin S + H2O = deaminohydroxyblasticidin S + NH3.","definition_xrefs":["EC:3.5.4.23","MetaCyc:BLASTICIDIN-S-DEAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"blasticidin-S deaminase activity","secondary_identifiers":["RHEA:10148"],"synonyms":[{"name":"blasticidin-S aminohydrolase activity","type":"related"}],"termid":"GO:0047711"}


id: PBO:0074085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 2","termid":"PBO:0074085"}


id: GO:0018521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,6-dihydroxy-2-methylcyclohexa-2,4-dienecarboxylate + NAD+ = 3-methylcatechol + CO2 + NADH.","definition_xrefs":["EC:1.3.1.68","RHEA:15657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0224","MetaCyc:1.3.1.68-RXN","KEGG_REACTION:R05314"],"synonyms":[{"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0018521"}


id: PBO:0016934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium transport regulatory factor (predicted)","termid":"PBO:0016934"}


id: FYPO:0006715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:mah","PomBase:vw","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"large and small daughter nuclei","synonyms":[{"name":"large and small daughter nuclei during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0006715"}


id: GO:0110146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a magnetosome.","definition_xrefs":["PMID:27620945","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"magnetosome","termid":"GO:0110143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"magnetosome membrane","termid":"GO:0110146"}


id: GO:0035810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urine volume","termid":"GO:0035809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urine volume","synonyms":[{"name":"diuresis","type":"broad"},{"name":"elevation of urinary volume","type":"exact"},{"name":"increase in urine flow","type":"exact"}],"termid":"GO:0035810"}


id: FYPO:0002912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, is elongated, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, elongated multinucleate cell","synonyms":[{"name":"inviable after spore germination, multinucleate elongated cell","type":"exact"},{"name":"inviable after spore germination, undivided elongated multinucleate cell","type":"exact"},{"name":"inviable following spore germination, without cell division, elongated multinucleate cell","type":"exact"},{"name":"inviable germinated spore, without cell division, elongated multinucleate cell","type":"exact"},{"name":"lethal after spore germination, without cell division, elongated multinucleate cell","type":"exact"}],"termid":"FYPO:0002912"}


id: PBO:0080549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 8","termid":"PBO:0080549"}


id: GO:2001218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of S/G2 transition of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of S/G2 transition of mitotic cell cycle (obsolete GO:2001218)","synonyms":[{"name":"negative regulation of S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:2001218"}


id: PBO:0113233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of the filamentous growth pathway; inhibits invasive growth by dampening the activity of the filamentous MAPK pathway; localizes to the cell wall and to the vacuole and cell periphery in HTP studies; deletion improves xylose fermentation in industrially engineered strains; nonessential gene","termid":"PBO:0113233"}


id: GO:0050267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (cis-prenyl)n-diphosphate + isopentenyl diphosphate = (cis-prenyl)(n+1)-diphosphate + diphosphate.","definition_xrefs":["RHEA:18801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"rubber cis-polyprenylcistransferase activity","secondary_identifiers":["MetaCyc:2.5.1.20-RXN","EC:2.5.1.20"],"synonyms":[{"name":"cis-prenyl transferase activity","type":"related"},{"name":"isopentenyl pyrophosphate cis-1,4-polyisoprenyl transferase activity","type":"related"},{"name":"poly-cis-polyprenyl-diphosphate:isopentenyl-diphosphate polyprenylcistransferase activity","type":"related"},{"name":"rubber allyltransferase activity","type":"related"},{"name":"rubber polymerase activity","type":"related"},{"name":"rubber prenyltransferase activity","type":"related"},{"name":"rubber transferase activity","type":"broad"}],"termid":"GO:0050267"}


id: FYPO:0003521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular L-ergothioneine level","synonyms":[{"name":"decreased L-ergothioneine level","type":"exact"},{"name":"decreased cellular L-ergothioneine accumulation","type":"related"},{"name":"reduced cellular L-ergothioneine level","type":"exact"}],"termid":"FYPO:0003521"}


id: PBO:0066283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member G, pseudogene","termid":"PBO:0066283"}


id: PATO:0001058
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001058 absolute acceleration (obsolete PATO:0001058)","termid":"PATO:0001058"}


id: GO:1903656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type IV pilus biogenesis.","definition_xrefs":["PMID:25049409","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"regulates","term_name":"type IV pilus assembly","termid":"GO:0043683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of type IV pilus biogenesis","synonyms":[{"name":"regulation of TFP biogenesis","type":"exact"},{"name":"regulation of type 4 pilus biogenesis","type":"exact"},{"name":"regulation of type IV fimbria assembly","type":"exact"},{"name":"regulation of type IV fimbria biogenesis","type":"exact"},{"name":"regulation of type IV fimbriae assembly","type":"exact"},{"name":"regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"regulation of type IV fimbrial assembly","type":"exact"},{"name":"regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"regulation of type IV fimbrium assembly","type":"exact"},{"name":"regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"regulation of type IV pilus biosynthesis","type":"exact"}],"termid":"GO:1903656"}


id: MONDO:0018032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constitutional neutropenia with extra-hematopoietic manifestations (obsolete MONDO:0018032)","secondary_identifiers":["Orphanet:331184"],"termid":"MONDO:0018032","xrefs":{"Monarch":{"xref_id":"0018032"}}}


id: SO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon with the DNA sequence TGA.","direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon","termid":"SO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opal_stop_codon","synonyms":[{"name":"Opal stop codon","type":"exact"}],"termid":"SO:0002335"}


id: MONDO:0001386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clinical or subclinical disturbances of cortical function due to a sudden, abnormal, excessive, and disorganized discharge of brain cells. Clinical manifestations include abnormal motor, sensory and psychic phenomena. Recurrent seizures are usually referred to as epilepsy or 'seizure disorder.'","definition_xrefs":["MESH:D012640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual cortex disorder","termid":"MONDO:0003584"},{"relation_name":"is_a","term_name":"reflex epilepsy","termid":"MONDO:0017768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"visual epilepsy","secondary_identifiers":["DOID:11832","MEDGEN:75723","NCIT:C3980","SCTID:39194005","UMLS:C0270824"],"synonyms":[{"name":"epilepsy, visual","type":"exact"}],"termid":"MONDO:0001386","xrefs":{"Monarch":{"xref_id":"0001386"}}}


id: MONDO:0026721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"},{"relation_name":"is_a","term_name":"NDUFB11-related disorders","termid":"MONDO:1040023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 30","secondary_identifiers":["UMLS:C4746985","DOID:0112098","MEDGEN:1648313","GARD:15284","OMIM:301021"],"synonyms":[{"name":"MC1DN30","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 30","type":"related"}],"termid":"MONDO:0026721","xrefs":{"Monarch":{"xref_id":"0026721"}}}


id: MONDO:0016581
data:
  {"annotated_genes":["SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85669],"is_not":false,"summary":null,"term":"MONDO:0016581"},{"annotations":[86927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008542"}]},"cv_name":"mondo","definition":"Conotruncal heart malformations are a group of congenital cardiac outflow tract anomalies that include such defects as tetralogy of Fallot, pulmonary atresia with ventricular septal defect, double-outlet right ventricle (DORV), double-outlet left ventricle, truncus arteriosus and transposition of the great arteries (TGA), among others. This group of defects is frequently found in patients with 22q11.2 deletion syndrome. A deletion of chromosome 22q11.2 has equally been associated in a subset of patients with various types of isolated non-syndromic conotruncal heart malformations (with the exception of DORV and TGA where this is very uncommon).","definition_xrefs":["Orphanet:2445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02730":null},"genotype_count":0,"is_obsolete":false,"name":"conotruncal heart malformations","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:217095","MEDGEN:341803","NANDO:2200275","ICD9:747.11","SCTID:218728005","UMLS:C1857586","GARD:8189"],"synonyms":[{"name":"CTHM","type":"related"},{"name":"Double-outlet right ventricle","type":"related"},{"name":"Taussig-Bing syndrome or defect","type":"exact"},{"name":"conotruncal anomaly face syndrome","type":"related"},{"name":"conotruncal cardiac defects","type":"related"},{"name":"conotruncal heart malformations","type":"exact"},{"name":"conotruncal heart malformations, variable","type":"exact"},{"name":"interrupted aortic Arch","type":"related"},{"name":"persistent truncus arteriosus","type":"related"},{"name":"truncus arteriosus communis","type":"related"}],"termid":"MONDO:0016581","terms_by_termid":{"MONDO:0008542":null,"MONDO:0016581":null},"xrefs":{"Monarch":{"xref_id":"0016581"}}}


id: FYPO:0006916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a cell cycle phase transition normally (i.e. indistinguishably from wild type).","definition_xrefs":["GO:0044770","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle phase transition","termid":"FYPO:0006916"}


id: PBO:0069970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1265, pseudogene","termid":"PBO:0069970"}


id: PBO:0067644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 818, pseudogene","termid":"PBO:0067644"}


id: PBO:0029483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_swollen_curved_cells_(obsolete_FYPO:0002232)","termid":"PBO:0029483"}


id: PBO:0070480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 15","termid":"PBO:0070480"}


id: MONDO:0006766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impaired ambulation not attributed to sensory impairment or motor weakness. frontal lobe disorders; basal ganglia diseases (e.g., parkinsonian disorders); dementia, multi-infarct; alzheimer disease; and other conditions may be associated with gait apraxia.","definition_xrefs":["MESH:D020235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apraxia","termid":"MONDO:0000665"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gait apraxia","secondary_identifiers":["UMLS:C1510417","MEDGEN:266930","MedDRA:10070635","DOID:4260"],"synonyms":[{"name":"Gait apraxia (finding)","type":"exact"}],"termid":"MONDO:0006766","xrefs":{"Monarch":{"xref_id":"0006766"}}}


id: PBO:0062233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 15 pseudogene","termid":"PBO:0062233"}


id: PBO:0043570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VII alpha 1 chain","termid":"PBO:0043570"}


id: PBO:0050616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2","termid":"PBO:0050616"}


id: GO:0004337
data:
  {"annotated_genes":["SJAG_00580","SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58200,67920],"is_not":false,"summary":null,"term":"GO:0004337"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E)-geranyl diphosphate + isopentenyl diphosphate = (2E,6E)-farnesyl diphosphate + diphosphate.","definition_xrefs":["RHEA:19361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"(2E,6E)-farnesyl diphosphate synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:FPPSYN-RXN","EC:2.5.1.10","Reactome:R-HSA-191303","Reactome:R-HSA-8870469","Reactome:R-HSA-9717830","KEGG_REACTION:R02003"],"synonyms":[{"name":"FPP synthetase activity","type":"related"},{"name":"farnesyl diphosphate synthase activity","type":"exact"},{"name":"farnesyl diphosphate synthetase activity","type":"related"},{"name":"farnesyl pyrophosphate synthetase activity","type":"exact"},{"name":"farnesyl-diphosphate synthase activity","type":"exact"},{"name":"farnesylpyrophosphate synthetase activity","type":"related"},{"name":"geranyl transferase I","type":"related"},{"name":"geranyl-diphosphate:isopentenyl-diphosphate geranyltranstransferase activity","type":"related"},{"name":"geranyltransferase activity","type":"related"},{"name":"geranyltranstransferase activity","type":"exact"}],"termid":"GO:0004337","terms_by_termid":{"GO:0004337":null}}


id: MONDO:0013237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"carpal tunnel syndrome","termid":"MONDO:0007275"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to mononeuropathy of the median nerve, mild","secondary_identifiers":["UMLS:C3150596","MEDGEN:461946","OMIM:613353"],"synonyms":[{"name":"MNMN","type":"related"},{"name":"carpal tunnel syndrome, susceptibility to","type":"related"},{"name":"mononeuropathy of the median nerve, mild","type":"exact"}],"termid":"MONDO:0013237","xrefs":{"Monarch":{"xref_id":"0013237"}}}


id: MONDO:0010477
data:
  {"annotated_genes":["SJAG_00156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87247],"is_not":false,"summary":null,"term":"MONDO:0010477"}]},"cv_name":"mondo","definition":"The Maat-Kievit-Brunner type of Ohdo syndrome is a rare condition characterized by intellectual disability and distinctive facial features. It has only been reported in males.","direct_ancestors":[{"relation_name":"is_a","term_name":"Ohdo syndrome and variants","termid":"MONDO:0000734"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"MED12-related intellectual disability syndrome","termid":"MONDO:0100000"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"blepharophimosis - intellectual disability syndrome, MKB type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:785805","Orphanet:293707","SCTID:699297004","UMLS:C3698541","ICD9:759.89","OMIM:300895","GARD:17341"],"synonyms":[{"name":"BMRS, MKB type","type":"exact"},{"name":"BMRS, Maat-Kievit-Brunner type","type":"exact"},{"name":"OHDOX","type":"related"},{"name":"Ohdo syndrome, X-linked","type":"related"},{"name":"Ohdo syndrome, X-linked, X-linked recessive","type":"exact"},{"name":"X-linked Ohdo syndrome","type":"exact"},{"name":"blepharophimosis-intellectual disability syndrome, Maat-Kievit-Brunner type","type":"exact"},{"name":"blepharophimosis-mental retardation syndrome, Maat-Kievit-Brunner type","type":"related"}],"termid":"MONDO:0010477","terms_by_termid":{"MONDO:0010477":null},"xrefs":{"Monarch":{"xref_id":"0010477"}}}


