# terms

id: GO:0043012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the binding and fusion of a sperm to the oocyte plasma membrane.","definition_xrefs":["GOC:jl","PMID:11483596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"fusion of sperm to egg plasma membrane involved in single fertilization","termid":"GO:0007342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of fusion of sperm to egg plasma membrane","synonyms":[{"name":"regulation of sperm-oocyte fusion","type":"narrow"}],"termid":"GO:0043012"}


id: GO:0015913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of short-chain fatty acids into a cell or organelle. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid transport","termid":"GO:0015912"},{"relation_name":"is_a","term_name":"fatty acid transmembrane transport","termid":"GO:1902001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"short-chain fatty acid transmembrane transport","synonyms":[{"name":"short-chain fatty acid import","type":"related"},{"name":"short-chain fatty acid uptake","type":"exact"}],"termid":"GO:0015913"}


id: GO:0110045
data:
  {"annotated_genes":["SJAG_04813","SJAG_03048","SJAG_02723","SJAG_01311","SJAG_00457","SJAG_03371","SJAG_02404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102682,104759,106137,106299,106974,109591,118697],"is_not":false,"summary":null,"term":"GO:0110045"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["PMID:17674143","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0110044"},{"relation_name":"negatively_regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_01311":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_04813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110045","terms_by_termid":{"GO:0110045":null}}


id: GO:0052648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ribitol phosphates, any phosphorylated form of ribitol, the pentitol derived formally by reduction of the -CHO group of either D- or L-ribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol phosphate metabolic process","termid":"GO:0052647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribitol phosphate metabolic process","synonyms":[{"name":"ribitol phosphate metabolism","type":"exact"}],"termid":"GO:0052648"}


id: PBO:0084305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron-sulfur protein subunit of succinate dehydrogenase; the complex couples the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; other members are Sdh1p, Sdh3p, and Sdh4p","termid":"PBO:0084305"}


id: PBO:0044486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 27 subfamily B member 1","termid":"PBO:0044486"}


id: MONDO:0011581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cardioectodermal syndrome that is often associated with the gene DSP, encoding desmoplakin. Desmoplakin is a member of the plakin family of cell adhesion molecules that are responsible for the formation and maintenance of desmosomes. Variation in DSP is associated with cardiomyopathic manifestations that include: (1) seemingly isolated arrhythmogenic right ventricle cardiomyopathy (ARVC) that is atypical and can show left ventricle dominance, or be present in the left and right ventricle simultaneously; and (2) dilated cardiomyopathy. Cutaneous phenotypes including wooly hair and/or keratoderma can present along with the cardiomyopathy, but are noted as less penetrant features.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with wooly hair (obsolete MONDO:0018558)","termid":"MONDO:0018558"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"cardioectodermal syndrome","termid":"MONDO:0100080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"arrhythmogenic cardiomyopathy with wooly hair and keratoderma","secondary_identifiers":["MEDGEN:340124","Orphanet:65282","MESH:C535581","OMIM:605676","DOID:0090128","SCTID:719835006","GARD:5595","UMLS:C1854063"],"synonyms":[{"name":"Carvajal syndrome","type":"exact"},{"name":"DCWHK","type":"exact"},{"name":"KWWH type II","type":"exact"},{"name":"arrhythmogenic cardiomyopathy with wooly hair and keratoderma","type":"exact"},{"name":"cardiomyopathy dilated with woolly hair and keratoderma","type":"related"},{"name":"cardiomyopathy dilated with wooly hair and keratoderma","type":"related"},{"name":"cardiomyopathy, dilated, with woolly hair and keratoderma","type":"related"},{"name":"cardiomyopathy, dilated, with wooly hair and keratoderma","type":"related"},{"name":"dilated cardiomyopathy with woolly hair and keratoderma","type":"exact"},{"name":"dilated cardiomyopathy with wooly hair and keratoderma","type":"exact"},{"name":"epidermolytic palmoplantar keratoderma woolly hair and dilated cardiomyopathy","type":"related"},{"name":"epidermolytic palmoplantar keratoderma wooly hair and dilated cardiomyopathy","type":"related"},{"name":"keratoderma with woolly hair type II","type":"exact"},{"name":"keratoderma with wooly hair type II","type":"exact"},{"name":"palmoplantar keratoderma with left ventricular cardiomyopathy and woolly hair","type":"exact"},{"name":"palmoplantar keratoderma with left ventricular cardiomyopathy and wooly hair","type":"exact"},{"name":"woolly hair - palmoplantar keratoderma - dilated cardiomyopathy","type":"related"},{"name":"woolly hair - palmoplantar keratoderma - dilated cardiomyopathy syndrome","type":"related"},{"name":"woolly hair-palmoplantar hyperkeratosis-dilated cardiomyopathy syndrome","type":"exact"},{"name":"woolly hair-palmoplantar keratoderma-dilated cardiomyopathy syndrome","type":"exact"},{"name":"wooly hair - palmoplantar keratoderma - dilated cardiomyopathy","type":"related"},{"name":"wooly hair - palmoplantar keratoderma - dilated cardiomyopathy syndrome","type":"related"},{"name":"wooly hair-palmoplantar hyperkeratosis-dilated cardiomyopathy syndrome","type":"exact"},{"name":"wooly hair-palmoplantar keratoderma-dilated cardiomyopathy syndrome","type":"exact"}],"termid":"MONDO:0011581","xrefs":{"Monarch":{"xref_id":"0011581"}}}


id: _global:contained_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X contained_by Y iff X starts after start of Y and X ends before end of Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_by","termid":"_global:contained_by"}


id: PBO:0045274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 25","termid":"PBO:0045274"}


id: MONDO:0006935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The obstruction of the right ventricular outflow tract that originates within the body of the right ventricle, that exists at the time of birth; it often occurs in association with other intracardiac anomalies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary valve stenosis","termid":"MONDO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pulmonary subvalvular stenosis","secondary_identifiers":["UMLS:C0034084","NCIT:C34961","NANDO:2100092","EFO:1001137","SCTID:204370002","MEDGEN:11030","DOID:8861","ICD9:746.83","MESH:D011662","NANDO:2200276"],"synonyms":[{"name":"congenital infundibular stenosis","type":"exact"},{"name":"infundibular pulmonic stenosis","type":"exact"},{"name":"infundibular pulmonic stenosis, congenital","type":"exact"},{"name":"pulmonary infundibular stenosis","type":"exact"},{"name":"subvalvular pulmonic stenosis","type":"exact"}],"termid":"MONDO:0006935","xrefs":{"Monarch":{"xref_id":"0006935"}}}


id: MONDO:0004598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of acute right heart failure produced by a sudden increase in resistance to blood flow in the pulmonary circulation.","definition_xrefs":["PMID:19186411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cor pulmonale","termid":"MONDO:0004596"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute cor pulmonale","secondary_identifiers":["ICD9:415","DOID:8514","DOID:8517","SCTID:67189007","MEDGEN:510041","ICD9:415.0","UMLS:C0155671","SCTID:49584005"],"synonyms":[{"name":"acute pulmonary heart disease","type":"exact"},{"name":"cor pulmonale, acute","type":"exact"}],"termid":"MONDO:0004598","xrefs":{"Monarch":{"xref_id":"0004598"}}}


id: MONDO:0006877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the ovary, generally caused by an ascending infection of organisms from the endocervix.","definition_xrefs":["MESH:D009869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oophoritis","secondary_identifiers":["SCTID:76047005","EFO:1001071","MEDGEN:14486","DOID:10974","MedDRA:10030345","UMLS:C0029051"],"synonyms":[{"name":"inflammation of ovary","type":"exact"},{"name":"ovary inflammation","type":"exact"}],"termid":"MONDO:0006877","xrefs":{"Monarch":{"xref_id":"0006877"}}}


id: GO:0070233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell death by apoptotic process.","definition_xrefs":["ISBN:0781765196","GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"negatively_regulates","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell apoptotic process","synonyms":[{"name":"down regulation of T cell apoptosis","type":"exact"},{"name":"down-regulation of T cell apoptosis","type":"exact"},{"name":"downregulation of T cell apoptosis","type":"exact"},{"name":"inhibition of T cell apoptosis","type":"narrow"},{"name":"negative regulation of T cell apoptosis","type":"narrow"},{"name":"negative regulation of T lymphocyte apoptosis","type":"exact"},{"name":"negative regulation of T-cell apoptosis","type":"exact"},{"name":"negative regulation of T-lymphocyte apoptosis","type":"exact"},{"name":"negative regulation of programmed cell death of T cells by apoptosis","type":"exact"}],"termid":"GO:0070233"}


id: GO:1904536
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904537"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic telomere tethering at nuclear periphery.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22959349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"mitotic telomere tethering at nuclear periphery","termid":"GO:0044820"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904536","terms_by_termid":{"GO:1904537":null}}


id: PBO:0005504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-lyase (predicted)","termid":"PBO:0005504"}


id: GO:0072122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of extraglomerular glomerular mesangium cells by cell division, resulting in the expansion of their population. Extraglomerular mesangial cells (also known as lacis cells, Goormaghtigh cells) are light-staining cells in the kidney found outside the glomerulus, near the vascular pole and macula densa.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extraglomerular mesangial cell proliferation","synonyms":[{"name":"Goormaghtigh proliferation","type":"related"},{"name":"lacis cell proliferation","type":"related"}],"termid":"GO:0072122"}


id: GO:0015947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methane metabolic process","synonyms":[{"name":"methane metabolism","type":"exact"}],"termid":"GO:0015947"}


id: PBO:0068943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 187, pseudogene","termid":"PBO:0068943"}


id: GO:0050174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine = phenylethylamine + CO2.","definition_xrefs":["EC:4.1.1.53","MetaCyc:PHENYLALANINE-DECARBOXYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"phenylalanine decarboxylase activity","secondary_identifiers":["RHEA:19717"],"synonyms":[{"name":"L-phenylalanine carboxy-lyase (phenylethylamine-forming)","type":"exact"},{"name":"L-phenylalanine carboxy-lyase activity","type":"related"},{"name":"L-phenylalanine decarboxylase activity","type":"related"},{"name":"aromatic L-amino acid decarboxylase activity","type":"broad"}],"termid":"GO:0050174"}


id: PBO:0113168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane peptide transporter; mediates transport of di- and tri-peptides; conserved protein that contains 12 transmembrane domains; PTR2 expression is regulated by N-end rule pathway via repression by Cup9p; targeted to vacuole via AP-3 pathway","termid":"PBO:0113168"}


id: MONDO:0015396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital laryngeal cyst is a rare larynx anomaly characterized by a cyst involving the larynx or supraglottis locations, such as the epiglottis and vallecula. Timing and severity of presentation depend on the size of the cyst and its proximity to the glottis and range from severe prenatal airway obstruction leading to polyhydramnios and pulmonary hypoplasia to postnatal inspiratory stridor associated with muffled cry, hoarseness and cyanotic episodes, and to feeding difficulties and failure to thrive. It can be associated with laryngomalacia.","definition_xrefs":["Orphanet:141124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital laryngeal cyst","secondary_identifiers":["MEDGEN:451040","UMLS:C0339880","icd11.foundation:591042640","GARD:19953","SCTID:765763007"],"termid":"MONDO:0015396","xrefs":{"Monarch":{"xref_id":"0015396"}}}


id: PBO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.10","termid":"PBO:0001840"}


id: PR:G2TRJ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.14c","synonyms":[{"name":"Spom972h-tam6","type":"exact"},{"name":"transcripts altered in meiosis protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ5"}


id: GO:0060634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of 4,6-pyruvylated galactose residue biosynthetic process, the chemical reactions and pathways resulting in the formation of the pyruvylated galactose residue 4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-(1->3)-. The galactose residue is part of a larger polysaccharide chain.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"regulates","term_name":"4,6-pyruvylated galactose residue biosynthetic process","termid":"GO:0051072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of 4,6-pyruvylated galactose residue biosynthetic process","termid":"GO:0060634"}


id: PR:O59700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.03c","synonyms":[{"name":"Spom972h-mfs3","type":"exact"}],"termid":"PR:O59700"}


id: PR:O74767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10805:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.05","secondary_identifiers":["UniProtKB:O74767"],"synonyms":[{"name":"SPBC24C6.05","type":"related"},{"name":"Spom972h-COPE","type":"exact"},{"name":"epsilon-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"epsilon-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74767"}


id: PBO:0046946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 72 member C","termid":"PBO:0046946"}


id: PBO:0035826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actin_filament-based_movement","termid":"PBO:0035826"}


id: PBO:0073163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC63 homolog, protein translocation regulator","termid":"PBO:0073163"}


id: PR:O94324
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.06c","synonyms":[{"name":"Spom972h-ppk31","type":"exact"},{"name":"meiotically up-regulated gene 25 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94324"}


id: GO:0019149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chloro-D-alanine + H2O = pyruvate + chloride + NH3.","definition_xrefs":["EC:4.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-chloro-D-alanine dehydrochlorinase activity","secondary_identifiers":["RHEA:18873","MetaCyc:3-CHLORO-D-ALANINE-DEHYDROCHLORINASE-RXN"],"synonyms":[{"name":"3-chloro-D-alanine chloride-lyase (deaminating)","type":"related"},{"name":"3-chloro-D-alanine chloride-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"beta-chloro-D-alanine dehydrochlorinase activity","type":"related"}],"termid":"GO:0019149"}


id: PBO:0027245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polyadenylated_5.8S_rRNA_level","termid":"PBO:0027245"}


id: PBO:0047041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member B","termid":"PBO:0047041"}


id: GO:0007302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attachment of the nurse cell nucleus to the plasma membrane.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus localization","termid":"GO:0051647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nurse cell nucleus anchoring","termid":"GO:0007302"}


id: PBO:0068530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 131, pseudogene","termid":"PBO:0068530"}


id: PR:Q9P7Y9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sin1 gene.","definition_xrefs":["UniProtKB:Q9P7Y9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-activated map kinase-interacting protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.02c","synonyms":[{"name":"SAPK-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sin1","type":"exact"}],"termid":"PR:Q9P7Y9"}


id: GO:0098666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of G protein-coupled serotonin receptor activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"G protein-coupled serotonin receptor complex","synonyms":[{"name":"G-protein coupled serotonin receptor complex","type":"exact"}],"termid":"GO:0098666"}


id: GO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by thrombin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","PMID:1672265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"thrombin-activated receptor signaling pathway","synonyms":[{"name":"thrombin receptor signaling pathway","type":"exact"},{"name":"thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070493"}


id: PBO:0114074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 5C, pseudogene","termid":"PBO:0114074"}


id: PBO:0112395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein She9/Mdm33","termid":"PBO:0112395"}


id: GO:0045439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isopenicillin N = penicillin N.","definition_xrefs":["EC:5.1.1.17","RHEA:20033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"isopenicillin-N epimerase activity","secondary_identifiers":["MetaCyc:5.1.1.17-RXN","KEGG_REACTION:R04147"],"synonyms":[{"name":"isopenicillin N epimerase activity","type":"exact"},{"name":"penicillin-N 5-amino-5-carboxypentanoyl-epimerase activity","type":"related"}],"termid":"GO:0045439"}


id: PBO:0050953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma","termid":"PBO:0050953"}


id: FYPO:0003539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) over the entire length of the chromosomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased global homologous chromosome pairing","synonyms":[{"name":"decreased generalised homologous chromosome pairing","type":"exact"},{"name":"decreased global homologous chromosome pairing at meiosis","type":"exact"},{"name":"decreased global synapsis","type":"exact"},{"name":"globally decreased homologous chromosome pairing","type":"exact"},{"name":"reduced global homologous chromosome pairing","type":"exact"}],"termid":"FYPO:0003539"}


id: PBO:0085396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane permease; mediates uptake of glycerophosphoinositol and glycerophosphocholine as sources of the nutrients inositol and phosphate; expression and transport rate are regulated by phosphate and inositol availability","termid":"PBO:0085396"}


id: PBO:0067953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 255","termid":"PBO:0067953"}


id: PBO:0055963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 75B","termid":"PBO:0055963"}


id: GO:0004241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-mitochondrial processing peptidase (obsolete GO:0004241)","synonyms":[{"name":"alpha-MPP","type":"exact"},{"name":"alpha-mitochondrial processing peptidase","type":"exact"}],"termid":"GO:0004241"}


id: MONDO:0005043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal increase in the number of cells in an organ or a tissue with consequent enlargement.","definition_xrefs":["NCIT:C3113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor","termid":"MONDO:0045024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperplasia","secondary_identifiers":["EFO:0000536","MESH:D006965","UMLS:C0020507","MEDGEN:43784"],"synonyms":[{"name":"hyperplasia","type":"exact"},{"name":"hyperplastic","type":"exact"}],"termid":"MONDO:0005043","xrefs":{"Monarch":{"xref_id":"0005043"}}}


id: FYPO:0003742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes two or more rounds of cell division during which chromosomes segregate unequally, and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, unequal chromosome segregation","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, unequal chromosome segregation","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, unequal chromosome segregation","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, unequal chromosome segregation","type":"exact"}],"termid":"FYPO:0003742"}


id: PBO:0068918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 161, pseudogene","termid":"PBO:0068918"}


id: GO:1904624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycine secretion, neurotransmission.","definition_xrefs":["GO_REF:0000058","PMID:22988142","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glycinergic","termid":"GO:0060092"},{"relation_name":"regulates","term_name":"glycine secretion, neurotransmission","termid":"GO:0061537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of glycine secretion, neurotransmission","termid":"GO:1904624"}


id: FYPO:0005555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin loading is decreased during the mitotic cell cycle. Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["PomBase:mah","GO:0061780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal cohesin loading","termid":"FYPO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000631","FYPO:0000641"],"is_obsolete":false,"name":"decreased mitotic cohesin loading","synonyms":[{"name":"decreased cohesin loading during mitotic cell cycle","type":"exact"},{"name":"decreased cohesin loading during vegetative growth","type":"exact"},{"name":"decreased mitotic cohesin association with chromatin","type":"exact"},{"name":"decreased mitotic cohesin localization to chromatin","type":"exact"},{"name":"reduced mitotic cohesin loading","type":"exact"}],"termid":"FYPO:0005555"}


id: GO:0005151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Type II interleukin-1 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor binding","termid":"GO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-1, type II receptor binding","synonyms":[{"name":"IL-1 type II","type":"narrow"},{"name":"interleukin-1, type II receptor ligand","type":"narrow"}],"termid":"GO:0005151"}


id: PBO:0116907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription factor A, and genome packaging protein (TFAM ortholog)","termid":"PBO:0116907"}


id: PBO:0060286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 3","termid":"PBO:0060286"}


id: RO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"},{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lays_eggs_in","termid":"RO:0002624"}


id: GO:0010051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterning of the conducting tissues. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylem and phloem pattern formation","synonyms":[{"name":"vascular tissue pattern formation","type":"exact"}],"termid":"GO:0010051"}


id: _global:adjacent_to
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A geometric operator, specified in Egenhofer 1989. Two features meet if they share a junction on the sequence. X adjacent_to Y iff X and Y share a boundary but do not overlap.","definition_xrefs":["PMID:20226267","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"spatially_disjoint_from","termid":"_global:spatially_disjoint_from"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adjacent_to","secondary_identifiers":["RO:0002220"],"synonyms":[{"name":"adjacent to","type":"exact"}],"termid":"_global:adjacent_to"}


id: GO:0071788
data:
  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64747],"is_not":false,"summary":null,"term":"GO:0071788"}]},"cv_name":"biological_process","definition":"The organization process that preserves the endoplasmic reticulum (ER) tubular network in a stable functional or structural state. The ER tubular network is the ER part that comprises the membranes with high curvature in cross-section.","definition_xrefs":["GOC:mah","PMID:16469703","PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum tubular network maintenance","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"ER tubular network maintenance","type":"exact"}],"termid":"GO:0071788","terms_by_termid":{"GO:0071788":null}}


id: PBO:0082406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of translation initiation factor eIF2B; the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as negative regulator of GCN4 expression; mutations in human ortholog EIF2B2 cause fatal brain disease childhood ataxia with central nervous system hypomyelination (CACH); human ortholog can complement yeast mutant, allows growth down-regulation of yeast gene","termid":"PBO:0082406"}


id: GO:0035944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a perforin protein due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"perforin production","termid":"GO:0035944"}


id: FYPO:0005037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 5 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["GO:0071620","PMID:22144909","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen starvation","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen deprivation","type":"exact"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 5 residues during nitrogen depletion","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005037"}


id: MONDO:0011220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkinson disease 3, autosomal dominant","secondary_identifiers":["MEDGEN:355499","DOID:0111250","MESH:C566552","GARD:8578","OMIM:602404","UMLS:C1865581"],"synonyms":[{"name":"PARK3","type":"exact"},{"name":"Parkinson disease 3","type":"exact"},{"name":"Parkinson disease 3, autosomal dominant","type":"related"},{"name":"Parkinson disease 3, autosomal dominant Lewy body","type":"related"},{"name":"Parkinson disease type 3","type":"related"},{"name":"autosomal dominant Parkinson disease","type":"related"}],"termid":"MONDO:0011220","xrefs":{"Monarch":{"xref_id":"0011220"}}}


id: MONDO:0001181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal edema","termid":"MONDO:0006712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"secondary corneal edema","secondary_identifiers":["UMLS:C0155110","ICD9:371.22","DOID:11032","SCTID:27536004","MEDGEN:509795"],"termid":"MONDO:0001181","xrefs":{"Monarch":{"xref_id":"0001181"}}}


id: MONDO:0017654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non progressive epilepsy and/or ataxia with myoclonus as a major feature (obsolete MONDO:0017654)","secondary_identifiers":["Orphanet:306759"],"termid":"MONDO:0017654","xrefs":{"Monarch":{"xref_id":"0017654"}}}


id: GO:0004630
data:
  {"annotated_genes":["SJAG_01519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74673],"is_not":false,"summary":null,"term":"GO:0004630"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate.","definition_xrefs":["EC:3.1.4.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phospholipase D activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1483142","Reactome:R-HSA-2029471","RHEA:14445","MetaCyc:PHOSCHOL-RXN","Reactome:R-HSA-1483182"],"synonyms":[{"name":"choline phosphatase activity","type":"related"},{"name":"lecithinase D activity","type":"related"},{"name":"lipophosphodiesterase II activity","type":"related"},{"name":"phosphatidylcholine phosphatidohydrolase activity","type":"related"}],"termid":"GO:0004630","terms_by_termid":{"GO:0004630":null}}


id: PBO:0068717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 6, pseudogene","termid":"PBO:0068717"}


id: PBO:0000565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase (glutamine hydrolyzing), aspartate carbamoyltransferase Ura1","termid":"PBO:0000565"}


id: GO:0048065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male insect extends his wings. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, veined wing extension","synonyms":[{"name":"male courtship behavior, wing extension","type":"broad"},{"name":"male courtship behaviour, veined wing extension","type":"exact"},{"name":"male courtship behaviour, wing extension","type":"broad"}],"termid":"GO:0048065"}


id: GO:2000180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of androgen biosynthetic process.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"negatively_regulates","term_name":"androgen biosynthetic process","termid":"GO:0006702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of androgen biosynthetic process","synonyms":[{"name":"negative regulation of androgen anabolism","type":"exact"},{"name":"negative regulation of androgen biosynthesis","type":"exact"},{"name":"negative regulation of androgen formation","type":"exact"},{"name":"negative regulation of androgen synthesis","type":"exact"}],"termid":"GO:2000180"}


id: PBO:0011165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific guanyl-nucleotide exchange factor Spo13","termid":"PBO:0011165"}


id: PBO:0046501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERI1 exoribonuclease family member 2","termid":"PBO:0046501"}


id: MONDO:0010295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by severe immunodeficiency, osteopetrosis, lymphedema and anhidrotic ectodermal dysplasia.","definition_xrefs":["Orphanet:69088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"},{"relation_name":"is_a","term_name":"IKBKG-related immunodeficiency with or without ectodermal dysplasia","termid":"MONDO:0100162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"anhidrotic ectodermal dysplasia-immunodeficiency-osteopetrosis-lymphedema syndrome","secondary_identifiers":["SCTID:720986005","GARD:16681","MEDGEN:929406","MESH:C564538","OMIM:300301","UMLS:C4303737"],"synonyms":[{"name":"OL-EDA-ID","type":"exact"},{"name":"OLEDAID","type":"related"},{"name":"ectodermal dysplasia, anhidrotic, with immunodeficiency, osteopetrosis, and lymphedema","type":"related"},{"name":"ol-EDA-ID","type":"exact"}],"termid":"MONDO:0010295","xrefs":{"Monarch":{"xref_id":"0010295"}}}


id: FYPO:0008069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at the mating type locus is observed over an increased portion of the mating-type region.","definition_xrefs":["PMID:18030666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at mating type locus during vegetative growth","termid":"FYPO:0005065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased spatial extent of histone H3-K9 methylation at mating type locus during vegetative growth","termid":"FYPO:0008069"}


id: GO:1901269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipooligosaccharide.","definition_xrefs":["GOC:yaf","UniPathway:UPA00501","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide metabolic process","synonyms":[{"name":"lipooligosaccharide metabolism","type":"exact"}],"termid":"GO:1901269"}


id: PBO:0074770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3C","termid":"PBO:0074770"}


id: GO:1905163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phagosome maturation.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of phagosome maturation","termid":"GO:1905162"},{"relation_name":"negatively_regulates","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phagosome maturation","synonyms":[{"name":"down regulation of phagosome maturation","type":"exact"},{"name":"down-regulation of phagosome maturation","type":"exact"},{"name":"downregulation of phagosome maturation","type":"exact"},{"name":"inhibition of phagosome maturation","type":"narrow"}],"termid":"GO:1905163"}


id: PATO:0001483
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Absence of an organ, tissue or cell due to failure to develop from a primordium or precursor cell.","definition_xrefs":["PATOC:PortlandMeetingFeb2015","PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aplastic/hypoplastic","termid":"PATO:0002290"},{"relation_name":"is_a","term_name":"agenesis","termid":"PATO:0002291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aplastic","synonyms":[{"name":"aplasia","type":"exact"},{"name":"undeveloped","type":"exact"}],"termid":"PATO:0001483"}


id: MONDO:0019781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, and subependymal giant cell astrocytoma.","definition_xrefs":["NCIT:C60781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrocytoma (excluding glioblastoma)","secondary_identifiers":["ONCOTREE:ASTR","EFO:0000272","SCTID:147101000119108","MESH:D001254","UMLS:C0004114","ICDO:9400/3","MEDGEN:438"],"synonyms":[{"name":"astrocytoma","type":"exact"}],"termid":"MONDO:0019781","xrefs":{"Monarch":{"xref_id":"0019781"}}}


id: PBO:0017432
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-temporally_related_to","termid":"PBO:0017432"}


id: PBO:0113127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Duo1p and Pse1p to connect the DASH complex with the microtubules (MT); couples kinetochores to the force produced by MT depolymerization, thereby aiding in chromosome segregation; N-terminal staple region is important for self-assembly of the Dam1 complex higher order ring structure that forms around microtubules; Ipl1p target for regulating kinetochore-MT attachments","termid":"PBO:0113127"}


id: PBO:0074465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase acid like 3B","termid":"PBO:0074465"}


id: GO:0005042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a netrin signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:dph","GOC:signaling","PMID:15960985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"netrin receptor activity","termid":"GO:0005042"}


id: PATO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of an object that has a value that is increased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"},{"relation_name":"is_a","term_name":"increased quality","termid":"PATO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased object quality","termid":"PATO:0002305"}


id: PBO:0045333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK8 antisense RNA 2","termid":"PBO:0045333"}


id: GO:1903537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any meiotic cell cycle process that is involved in oocyte maturation.","definition_xrefs":["PMID:25212395","GOC:jz","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"oocyte maturation","termid":"GO:0001556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic cell cycle process involved in oocyte maturation","synonyms":[{"name":"meiosis involved in oocyte maturation","type":"broad"}],"termid":"GO:1903537"}


id: FYPO:0006938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cables than normal during cytokinesis.","definition_xrefs":["PomBase:mah","PMID:30709916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cables present in increased numbers","termid":"FYPO:0006027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"actin cables present in increased numbers during cytokinesis","synonyms":[{"name":"actin cables present in increased numbers during cytokinesis during mitotic cell cycle","type":"related"},{"name":"actin cables present in increased numbers during cytokinesis during vegetative growth","type":"exact"},{"name":"formin-nucleated actin cables present in increased numbers during cytokinesis","type":"exact"},{"name":"increased level of actin cables during cytokinesis","type":"related"},{"name":"more actin cables present during cytokinesis","type":"exact"}],"termid":"FYPO:0006938"}


id: PBO:0110459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane O-mannosyltransferase Ogm4","termid":"PBO:0110459"}


id: PBO:0064511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J3","termid":"PBO:0064511"}


id: MONDO:0019183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited odontologic disease (obsolete MONDO:0019183)","secondary_identifiers":["Orphanet:77830"],"termid":"MONDO:0019183","xrefs":{"Monarch":{"xref_id":"0019183"}}}


id: MONDO:0044224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apocrine gland secretion, variation 1n (obsolete MONDO:0044224)","secondary_identifiers":["OMIM:117800"],"synonyms":[{"name":"Ear wax, wet/dry","type":"related"},{"name":"apocrine gland secretion, variation IN","type":"related"},{"name":"axillary odor, variation 1N","type":"related"},{"name":"axillary odor, variation in","type":"exact"},{"name":"cerumen, variation 1N","type":"related"},{"name":"colostrum secretion, variation 1N","type":"related"},{"name":"colostrum secretion, variation in","type":"exact"},{"name":"earwax, wet/dry","type":"exact"},{"name":"wet wax","type":"related"}],"termid":"MONDO:0044224","xrefs":{"Monarch":{"xref_id":"0044224"}}}


id: GO:0045924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the willingness or readiness of a female to receive male advances.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female mating behavior","termid":"GO:0060180"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female receptivity","secondary_identifiers":["GO:0060181"],"synonyms":[{"name":"female receptivity","type":"related"}],"termid":"GO:0045924"}


id: GO:0004083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-bisphospho-D-glycerate + H2O = 3-phospho-D-glycerate + phosphate.","definition_xrefs":["PMID:8567632","PMID:9452443"],"gene_count":0,"genotype_count":0,"name":"obsolete bisphosphoglycerate 2-phosphatase activity (obsolete GO:0004083)","termid":"GO:0004083"}


id: GO:0071756
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circulating form of IgM consisting of a pentamer of IgM core units with a single J chain polypeptide.","definition_xrefs":["PMID:20176268","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM immunoglobulin complex, circulating","termid":"GO:0071754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"pentameric IgM immunoglobulin complex","synonyms":[{"name":"pentameric IgM antibody","type":"exact"}],"termid":"GO:0071756"}


id: PBO:0042479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 5","termid":"PBO:0042479"}


id: GO:0003853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Catalysis of the reaction: a short-chain 2-methyl fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a short-chain (2E)-2-methyl-2-enoyl-CoA + reduced [electron-transfer flavoprotein].","definition_xrefs":["PMID:6401712","PMID:10989435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acyl-CoA dehydrogenase activity","termid":"GO:0016937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"short-chain 2-methyl fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.8.5","GO:0047119","KEGG_REACTION:R03169"],"synonyms":[{"name":"2-methyl branched chain acyl-CoA dehydrogenase activity","type":"narrow"},{"name":"2-methyl-branched-chain-enoyl-CoA reductase activity","type":"related"},{"name":"2-methylacyl-CoA dehydrogenase activity","type":"narrow"},{"name":"2-methylbutanoyl-CoA dehydrogenase activity","type":"narrow"},{"name":"2-methylpropanoyl-CoA dehydrogenase activity","type":"narrow"},{"name":"branched-chain acyl-CoA dehydrogenase activity","type":"narrow"},{"name":"isobutyryl-CoA:FAD oxidoreductase activity","type":"narrow"}],"termid":"GO:0003853"}


id: PR:O74322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1202 gene.","definition_xrefs":["UniProtKB:O74322","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S12-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.02c","synonyms":[{"name":"Spom972h-rps1202","type":"exact"}],"termid":"PR:O74322"}


id: MONDO:0019684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare bone disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare bone disease (obsolete MONDO:0019684)","secondary_identifiers":["Orphanet:93419"],"synonyms":[{"name":"rare bone disease","type":"exact"}],"termid":"MONDO:0019684","xrefs":{"Monarch":{"xref_id":"0019684"}}}


id: PBO:0109473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-modified_residue","termid":"PBO:0109473"}


id: MONDO:0011727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anorexia nervosa, susceptibility to, 1","secondary_identifiers":["UMLS:C1847492","MEDGEN:376139","OMIM:606788"],"synonyms":[{"name":"AN","type":"related"},{"name":"ANON1","type":"exact"},{"name":"anon","type":"related"},{"name":"anorexia nervosa, susceptibility to","type":"related"},{"name":"anorexia nervosa, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0011727","xrefs":{"Monarch":{"xref_id":"0011727"}}}


id: PBO:0027576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_endoplasmic_reticulum","termid":"PBO:0027576"}


id: GO:0047083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NADPH + H+ + trans-5-O-(4-coumaroyl)-D-quinate = H2O + NADP+ + trans-5-O-caffeoyl-D-quinate.","definition_xrefs":["EC:1.14.14.96","MetaCyc:1.14.13.36-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase activity","secondary_identifiers":["RHEA:16265"],"synonyms":[{"name":"5-O-(4-coumaroyl)-D-quinate/shikimate 3'-hydroxylase activity","type":"exact"},{"name":"coumaroylquinate(coumaroylshikimate) 3'-monooxygenase activity","type":"related"},{"name":"trans-5-O-(4-coumaroyl)-D-quinate,NADPH:oxygen oxidoreductase (3'-hydroxylating)","type":"related"}],"termid":"GO:0047083"}


id: PBO:0025455
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperoxaluria","termid":"PBO:0025455"}


id: FYPO:0003910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of retrotransposon nucleocapsid complexes (also called virus-like particles, VLPs) to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished VLP localization to nucleus during vegetative growth","synonyms":[{"name":"VLP localization to nucleus abolished during vegetative growth","type":"exact"},{"name":"abolished VLP localisation to nucleus during vegetative growth","type":"exact"},{"name":"abolished VLP localization in nucleus during vegetative growth","type":"exact"},{"name":"abolished VLP localization to nucleus during vegetative growth during mitotic cell cycle","type":"related"},{"name":"abolished retrotransposon nucleocapsid localization to nucleus during vegetative growth","type":"exact"},{"name":"abolished virus-like particle localization to nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0003910"}


id: PBO:0074440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 41","termid":"PBO:0074440"}


id: PBO:0064460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha 1, catalytic subunit","termid":"PBO:0064460"}


id: PBO:0076865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX13 family member C","termid":"PBO:0076865"}


id: GO:0023047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a chemical signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by chemical mediator (obsolete GO:0023047)","synonyms":[{"name":"signal initiation by chemical mediator","type":"exact"}],"termid":"GO:0023047"}


id: GO:0005874
data:
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id: MONDO:0001471
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id: FYECO:0000414
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id: PBO:0075725
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id: PBO:0062113
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id: PR:Q9P7Y7
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id: MONDO:0007152
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id: GO:0034667
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id: GO:2000286
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id: GO:0030029
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id: MONDO:0100334
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id: MONDO:0005529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete methylmalonic aciduria and homocystinuria type cblG (obsolete MONDO:0005529)","termid":"MONDO:0005529","xrefs":{"Monarch":{"xref_id":"0005529"}}}


id: MONDO:0002738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of non-suppurative otitis media.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-suppurative otitis media","termid":"MONDO:0001212"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute transudative otitis media","secondary_identifiers":["MEDGEN:543339","ICD9:381.0","ICD9:381.00","DOID:3697","SCTID:359609001","UMLS:C0271432"],"synonyms":[{"name":"acute non-suppurative otitis media","type":"exact"},{"name":"acute nonsuppurative otitis media","type":"exact"},{"name":"acute otitis media with effusion","type":"exact"},{"name":"acute secretory otitis media","type":"exact"},{"name":"acute transudative otitis media","type":"exact"},{"name":"non-suppurative otitis media, acute","type":"exact"}],"termid":"MONDO:0002738","xrefs":{"Monarch":{"xref_id":"0002738"}}}


id: GO:0019306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-D-rhamnose metabolic process","termid":"GO:0046382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GDP-D-rhamnose biosynthetic process","secondary_identifiers":["MetaCyc:GDPRHAMSYN-PWY"],"synonyms":[{"name":"GDP-D-rhamnose anabolism","type":"exact"},{"name":"GDP-D-rhamnose biosynthesis","type":"exact"},{"name":"GDP-D-rhamnose formation","type":"exact"},{"name":"GDP-D-rhamnose synthesis","type":"exact"}],"termid":"GO:0019306"}


id: GO:0015802
data:
  {"annotated_genes":["SJAG_00877","SJAG_03256","SJAG_04715","SJAG_01336","SJAG_04983","SJAG_00051","SJAG_04725","SJAG_01923","SJAG_02029","SJAG_01636","SJAG_03400","SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[94916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[104339,97661,104341,104342,104340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[104148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[63572,99145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[97676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[104151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[110353,103121,104152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01923":null,"SJAG_02029":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04715":null,"SJAG_04725":null,"SJAG_04983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"basic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015802","terms_by_termid":{"GO:0034488":null,"GO:0034490":null,"GO:0089708":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null,"GO:1903826":null,"GO:1990822":null}}


id: MONDO:0018934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucopolysaccharidosis type 1 (obsolete MONDO:0018934)","termid":"MONDO:0018934","xrefs":{"Monarch":{"xref_id":"0018934"}}}


id: PBO:0051677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibin subunit alpha","termid":"PBO:0051677"}


id: GO:0016287
data:
  {"annotated_genes":["SJAG_02654","SJAG_03305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70299,70946],"is_not":false,"summary":null,"term":"GO:0016287"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + glycerone phosphate = 1-acylglycerone 3-phosphate + CoA.","definition_xrefs":["RHEA:17657","EC:2.3.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02654":null,"SJAG_03305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"glycerone-phosphate O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:2.3.1.42-RXN","Reactome:R-HSA-75879","KEGG_REACTION:R01013","Reactome:R-HSA-1483002"],"synonyms":[{"name":"acyl-CoA:glycerone-phosphate O-acyltransferase activity","type":"related"},{"name":"dihydroxyacetone phosphate acyltransferase activity","type":"related"}],"termid":"GO:0016287","terms_by_termid":{"GO:0016287":null}}


id: _global:involved_in_negative_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' negatively regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"_global:involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_negative_regulation_of","secondary_identifiers":["RO:0002430"],"termid":"_global:involved_in_negative_regulation_of"}


id: PBO:0038837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 4","termid":"PBO:0038837"}


id: MONDO:0019913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Silver-Russell syndrome due to maternal uniparental disomy of chromosome 7 is a genetic malformation syndrome with short stature characterized by severe prenatal and postnatal growth retardation, feeding difficulties, body asymmetry, dysmorphic craniofacial features (triangular-shaped face, relative macrocephaly, frontal bossing, micrognathia, down-turned corners of the mouth) and other anomalies (fifth finger clinodactyly, café au lait macules, male genital anomalies, mild developmental delay and/or speech delay with movement disorders).","definition_xrefs":["Orphanet:96182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Silver-Russell syndrome","termid":"MONDO:0008394"},{"relation_name":"is_a","term_name":"chromosome 7 disorder","termid":"MONDO:0700014"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silver-Russell syndrome due to maternal uniparental disomy of chromosome 7","secondary_identifiers":["GARD:19334","UMLS:C5680247","MEDGEN:1826074"],"synonyms":[{"name":"Silver-Russell syndrome due to maternal uniparental disomy of chromosome type 7","type":"exact"},{"name":"UPD(7)mat","type":"exact"}],"termid":"MONDO:0019913","xrefs":{"Monarch":{"xref_id":"0019913"}}}


id: GO:0018328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).","definition_xrefs":["RESID:AA0036"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 3'-phospho-L-histidine (obsolete GO:0018328)","termid":"GO:0018328"}


id: PBO:0053239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL3 antisense RNA 2","termid":"PBO:0053239"}


id: GO:0060615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a bud forms from the mammary placode. A mammary bud is bulb of epithelial cells that is distinct from the surrounding epidermis.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"mammary gland bud morphogenesis","termid":"GO:0060648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland bud formation","termid":"GO:0060615"}


id: GO:2000958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of cyclodextrin metabolic process","termid":"GO:2000955"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin catabolic process","termid":"GO:2000957"},{"relation_name":"negatively_regulates","term_name":"cyclodextrin catabolic process","termid":"GO:2000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclodextrin catabolic process","synonyms":[{"name":"negative regulation of cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000958"}


id: GO:1901895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an ATPase-coupled calcium transmembrane transporter activity.","definition_xrefs":["PMID:19708671","GOC:TermGenie","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of ATPase-coupled calcium transmembrane transporter activity","termid":"GO:1901894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of ATPase-coupled calcium transmembrane transporter activity","synonyms":[{"name":"down regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"down regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"down regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"down regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"down regulation of calcium ABC transporter","type":"narrow"},{"name":"down regulation of calcium efflux ATPase","type":"narrow"},{"name":"down regulation of calcium pump","type":"broad"},{"name":"down regulation of calcium transporting ATPase activity","type":"exact"},{"name":"down regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"down regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"down regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"down regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"down regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"down-regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"down-regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"down-regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"down-regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"down-regulation of calcium ABC transporter","type":"narrow"},{"name":"down-regulation of calcium efflux ATPase","type":"narrow"},{"name":"down-regulation of calcium pump","type":"broad"},{"name":"down-regulation of calcium transporting ATPase activity","type":"exact"},{"name":"down-regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"down-regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"down-regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"down-regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"down-regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"downregulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"downregulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"downregulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"downregulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"downregulation of calcium ABC transporter","type":"narrow"},{"name":"downregulation of calcium efflux ATPase","type":"narrow"},{"name":"downregulation of calcium pump","type":"broad"},{"name":"downregulation of calcium transporting ATPase activity","type":"exact"},{"name":"downregulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"downregulation of calcium-transporting ATPase activity","type":"exact"},{"name":"downregulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"downregulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"downregulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"inhibition of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"inhibition of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"inhibition of Ca2+-pumping ATPase activity","type":"exact"},{"name":"inhibition of Ca2+-transporting ATPase activity","type":"exact"},{"name":"inhibition of calcium ABC transporter","type":"narrow"},{"name":"inhibition of calcium efflux ATPase","type":"narrow"},{"name":"inhibition of calcium pump","type":"broad"},{"name":"inhibition of calcium transporting ATPase activity","type":"exact"},{"name":"inhibition of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"inhibition of calcium-transporting ATPase activity","type":"narrow"},{"name":"inhibition of plasma membrane Ca-ATPase","type":"narrow"},{"name":"inhibition of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"inhibition of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"negative regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"negative regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"negative regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"negative regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"negative regulation of calcium ABC transporter","type":"narrow"},{"name":"negative regulation of calcium efflux ATPase","type":"narrow"},{"name":"negative regulation of calcium pump","type":"broad"},{"name":"negative regulation of calcium transporting ATPase activity","type":"exact"},{"name":"negative regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"negative regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"negative regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"negative regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"negative regulation of sarcoplasmic reticulum ATPase","type":"narrow"}],"termid":"GO:1901895"}


id: PBO:0050467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOX transcript antisense RNA","termid":"PBO:0050467"}


id: GO:0015219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of protein-DNA complexes from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA complex transmembrane transporter activity (obsolete GO:0015219)","synonyms":[{"name":"DNA-protein complex transmembrane transporter activity","type":"exact"}],"termid":"GO:0015219"}


id: PBO:0042377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD207 molecule","termid":"PBO:0042377"}


id: PBO:0079855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B4 (pseudogene)","termid":"PBO:0079855"}


id: GO:0071799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin D stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"response to prostaglandin D","termid":"GO:0071798"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin D stimulus","termid":"GO:0071799"}


id: PATO:0001415
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a population by virtue of the proportion of its members that are ill at a given time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"population quality","termid":"PATO:0002003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morbidity","termid":"PATO:0001415"}


id: MONDO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, slow-growing and painless neoplasm of sweat glands. It usually arises in the head and neck. It is characterized by the presence of a mesenchymal chondroid stroma, fibrosis, and epithelial structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine sweat gland neoplasm","termid":"MONDO:0002090"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"eccrine mixed tumor of skin","secondary_identifiers":["MEDGEN:91074","DOID:2079","NCIT:C4474","SCTID:254720009","UMLS:C0346026","MONDO:0006308","EFO:1000385"],"synonyms":[{"name":"benign mixed tumor of skin","type":"exact"},{"name":"benign mixed tumor of skin (chondroid syringoma)","type":"exact"},{"name":"benign mixed tumor of the skin","type":"exact"},{"name":"benign mixed tumor of the skin (chondroid syringoma)","type":"exact"},{"name":"benign mixed tumour of skin","type":"exact"},{"name":"benign mixed tumour of skin (chondroid syringoma)","type":"exact"},{"name":"benign mixed tumour of the skin","type":"exact"},{"name":"benign mixed tumour of the skin (chondroid syringoma)","type":"exact"},{"name":"chondroid syringoma","type":"exact"},{"name":"eccrine mixed tumor","type":"exact"},{"name":"eccrine mixed tumor (morphologic abnormality)","type":"exact"},{"name":"eccrine mixed tumour","type":"exact"},{"name":"eccrine mixed tumour (morphologic abnormality)","type":"exact"},{"name":"eccrine sweat gland mixed neoplasm","type":"exact"},{"name":"mixed eccrine neoplasm of the skin","type":"exact"},{"name":"mixed tumor of the skin (chondroid syringoma)","type":"exact"},{"name":"mixed tumour of the skin (chondroid syringoma)","type":"exact"}],"termid":"MONDO:0002200","xrefs":{"Monarch":{"xref_id":"0002200"}}}


id: MONDO:0008658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete virus Rd114 RNA Complementarity (obsolete MONDO:0008658)","secondary_identifiers":["OMIM:193070"],"synonyms":[{"name":"virus Rd114 RNA Complementarity","type":"exact"}],"termid":"MONDO:0008658","xrefs":{"Monarch":{"xref_id":"0008658"}}}


id: PBO:0081263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 1","termid":"PBO:0081263"}


id: PBO:0052336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2013","termid":"PBO:0052336"}


id: GO:0140488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding specifically to heme to deliver it to a transport vesicle.","definition_xrefs":["PMID:28193844","PMID:32185489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"heme receptor activity","termid":"GO:0140488"}


id: GO:0031896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a V2 vasopressin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin receptor binding","termid":"GO:0031893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"V2 vasopressin receptor binding","synonyms":[{"name":"V2 vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031896"}


id: PBO:0080899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta pseudogene 2","termid":"PBO:0080899"}


id: GO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD4-positive, alpha-beta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta intraepithelial T cell differentiation","termid":"GO:0002299"},{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta intraepithelial T cell differentiation","synonyms":[{"name":"CD4-positive, alpha-beta intraepithelial T cell development","type":"related"},{"name":"CD4-positive, alpha-beta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002301"}


id: GO:0033620
data:
  {"annotated_genes":["SJAG_00285","SJAG_00145","SJAG_00448","SJAG_04601","SJAG_04768","SJAG_03939","SJAG_04942","SJAG_02037","SJAG_01412","SJAG_02720","SJAG_04022","SJAG_03747","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87802,93148,95477,95828,97869,98457,99408,104609,109540,110139,111623,113082,118439],"is_not":false,"summary":null,"term":"GO:0033620"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that forms during meiotic prophase in a fixed position in the horsetail nucleus; contains Mei2 and meiRNA. May play a role in the progression of meiosis I.","definition_xrefs":["PMID:12808043","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00285":null,"SJAG_00448":null,"SJAG_01412":null,"SJAG_02037":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_03747":null,"SJAG_03939":null,"SJAG_04022":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Mei2 nuclear dot complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mei2 dot","type":"exact"},{"name":"Mei2 nuclear dot","type":"broad"},{"name":"nuclear body","type":"related"}],"termid":"GO:0033620","terms_by_termid":{"GO:0033620":null}}


id: GO:0000923
data:
  {"annotated_genes":["SJAG_07018","SJAG_03073","SJAG_01215","SJAG_03264","SJAG_02737","SJAG_03835","SJAG_01756","SJAG_02886","SJAG_03052","SJAG_02761","SJAG_00856","SJAG_02609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100403,100690,101301,101743,102638,106768,109164,109919,110901,113092,117262,117514],"is_not":false,"summary":null,"term":"GO:0000923"}]},"cv_name":"cellular_component","definition":"A microtubule organizing center formed by a band of gamma-tubulin that is recruited to a circumferential band of F-actin at the midpoint of a cell and which nucleates microtubules from the cell division site at the end of mitosis.","definition_xrefs":["PMID:11792817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"equatorial microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"EMTOC","type":"exact"},{"name":"equatorial microtubule organising centre","type":"exact"}],"termid":"GO:0000923","terms_by_termid":{"GO:0000923":null}}


id: PBO:0004371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex large subunit Nuc1","termid":"PBO:0004371"}


id: GO:0045263
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins.","definition_xrefs":["PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete proton-transporting ATP synthase complex, coupling factor F(o) (obsolete GO:0045263)","synonyms":[{"name":"hydrogen-transporting ATP synthase complex, coupling factor F(o)","type":"exact"},{"name":"hydrogen-transporting ATP synthase, F0 sector","type":"exact"},{"name":"hydrogen-transporting ATP synthase, coupling factor CF(0)","type":"narrow"},{"name":"proton-transporting ATP synthase complex, coupling factor F(0)","type":"exact"}],"termid":"GO:0045263"}


id: PBO:0056649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 16","termid":"PBO:0056649"}


id: PBO:0076598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 20","termid":"PBO:0076598"}


id: FYPO:0005525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal in centromere inner repeat regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:22990236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy at centromeric heterochromatin","termid":"FYPO:0008151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleosome occupancy at centromere inner repeat","synonyms":[{"name":"decreased nucleosome occupancy at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in centromere inner repeat","type":"exact"},{"name":"reduced nucleosome occupancy at centromere inner repeat","type":"exact"}],"termid":"FYPO:0005525"}


id: MONDO:0015521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy with vanishing white matter","termid":"MONDO:0800448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"juvenile or adult CACH syndrome","secondary_identifiers":["GARD:16980","icd11.foundation:1400114953","MEDGEN:1826173","UMLS:C5680649","Orphanet:157719"],"termid":"MONDO:0015521","xrefs":{"Monarch":{"xref_id":"0015521"}}}


id: MONDO:0031615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial bent bone dysplasia syndrome","secondary_identifiers":["OMIMPS:614592"],"termid":"MONDO:0031615","xrefs":{"Monarch":{"xref_id":"0031615"}}}


id: PBO:0063565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proenkephalin","termid":"PBO:0063565"}


id: PBO:0031322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_menadione","termid":"PBO:0031322"}


id: MONDO:1010038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gingival hypertrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth mucosa disorder, non-human animal","termid":"MONDO:1011334"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival hypertrophy, non-human animal","secondary_identifiers":["OMIA:000409"],"termid":"MONDO:1010038","xrefs":{"Monarch":{"xref_id":"1010038"}}}


id: GO:0050871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of B cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell activation","termid":"GO:0050864"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"},{"relation_name":"positively_regulates","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell activation","synonyms":[{"name":"activation of B cell activation","type":"narrow"},{"name":"positive regulation of B lymphocyte activation","type":"exact"},{"name":"positive regulation of B-cell activation","type":"exact"},{"name":"positive regulation of B-lymphocyte activation","type":"exact"},{"name":"stimulation of B cell activation","type":"narrow"},{"name":"up regulation of B cell activation","type":"exact"},{"name":"up-regulation of B cell activation","type":"exact"},{"name":"upregulation of B cell activation","type":"exact"}],"termid":"GO:0050871"}


id: PBO:0031356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_drug_(obsolete_FYPO:0000074)","termid":"PBO:0031356"}


id: FYPO:0001668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein processing is normal (i.e. indistinguishable from wild type). Protein processing is any protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein.","definition_xrefs":["GO:0016485","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein processing during vegetative growth","synonyms":[{"name":"normal protein processing during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001668"}


id: FYPO:0007571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cortical endoplasmic reticulum (ER) organization is abnormal. Cortical ER organization results in the assembly, arrangement of constituent parts, or disassembly of the part of the endoplasmic reticulum that consists of highly dynamic tubules that are juxtaposed to the plasma membrane.","definition_xrefs":["PMID:19571115","GO:0032541","GO:0007029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum organization","termid":"FYPO:0000805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cortical endoplasmic reticulum organization","synonyms":[{"name":"abnormal cortical ER organization","type":"exact"},{"name":"abnormal cortical endoplasmic reticulum organisation","type":"exact"},{"name":"abnormal cortical endoplasmic reticulum organization during mitotic cell cycle","type":"related"},{"name":"abnormal cortical endoplasmic reticulum organization during vegetative growth","type":"exact"}],"termid":"FYPO:0007571"}


id: MONDO:0006664
data:
  {"annotated_genes":["SJAG_03145","SJAG_02431","SJAG_03703","SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86291,86292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013567"},{"annotations":[85664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013011"},{"annotations":[86980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013770"}]},"cv_name":"mondo","definition":"Interauricular communication is a congenital malformation characterized by a communication between the atrial chambers of the heart.","definition_xrefs":["Orphanet:1478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart septal defect","termid":"MONDO:0002078"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_02730":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10068864","NANDO:2100085","GARD:15018","MedDRA:10019308","MESH:D006344","OMIMPS:108800","SCTID:253366007","UMLS:C0018817","EFO:1000825","DOID:1882","MedDRA:10003664","NORD:820","MEDGEN:6753","NCIT:C84473"],"synonyms":[{"name":"ASD","type":"exact"},{"name":"Atrial Septal Defects","type":"exact"},{"name":"atrial septal defect","type":"exact"},{"name":"atrial septum defect","type":"exact"},{"name":"atrioseptal defect","type":"exact"},{"name":"auricular septal defect","type":"exact"},{"name":"congenital atrial septal defect","type":"exact"},{"name":"interatrial communication","type":"related"},{"name":"interatrial septal defect","type":"exact"},{"name":"interauricular communication","type":"exact"},{"name":"interauricular septal defect","type":"exact"}],"termid":"MONDO:0006664","terms_by_termid":{"MONDO:0013011":null,"MONDO:0013567":null,"MONDO:0013770":null},"xrefs":{"Monarch":{"xref_id":"0006664"}}}


id: PBO:0086245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may be involved in pH regulation; probable ortholog of A. nidulans PalC, which is involved in pH regulation and binds to the ESCRT-III complex; null mutant does not properly process Rim101p and has decreased resistance to rapamycin; GFP-fusion protein is cytoplasmic; relative distribution to cytoplasm increases upon DNA replication stress","termid":"PBO:0086245"}


id: MONDO:0021521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the mediastinum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of mediastinum","termid":"MONDO:0021386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of mediastinum","secondary_identifiers":["ICD10CM:D15.2","MEDGEN:102298","NCIT:C3604","SCTID:92214000","UMLS:C0153956","icd11.foundation:1337535393","ICD9:212.5"],"synonyms":[{"name":"benign mediastinal neoplasm","type":"exact"},{"name":"benign mediastinal tumor","type":"exact"},{"name":"benign mediastinal tumour","type":"exact"},{"name":"benign neoplasm of the mediastinum","type":"exact"},{"name":"benign tumor of mediastinum","type":"exact"},{"name":"benign tumor of the mediastinum","type":"exact"},{"name":"benign tumour of mediastinum","type":"exact"},{"name":"benign tumour of the mediastinum","type":"exact"},{"name":"mediastinum benign neoplasm","type":"exact"}],"termid":"MONDO:0021521","xrefs":{"Monarch":{"xref_id":"0021521"}}}


id: PATO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000144 solid substance (obsolete PATO:0000144)","termid":"PATO:0000144"}


id: GO:0110002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tRNA methylation.","definition_xrefs":["PMID:23074192","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA processing","termid":"GO:2000235"},{"relation_name":"regulates","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of tRNA methylation","termid":"GO:0110002"}


id: GO:0004525
data:
  {"annotated_genes":["SJAG_04019","SJAG_01463","SJAG_04527","SJAG_02156","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59952,60589,68096,73942,77024],"is_not":false,"summary":null,"term":"GO:0004525"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.","definition_xrefs":["PMID:11157775","PMID:15242644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"},{"relation_name":"is_a","term_name":"double-stranded RNA-specific ribonuclease activity","termid":"GO:0032296"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01463":null,"SJAG_02156":null,"SJAG_03689":null,"SJAG_04019":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"ribonuclease III activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9708292","Reactome:R-HSA-9708408","MetaCyc:3.1.26.3-RXN","Reactome:R-HSA-203893","Reactome:R-HSA-426464","Reactome:R-HSA-203862","Reactome:R-HSA-9820840","EC:3.1.26.3"],"synonyms":[{"name":"RNase III activity","type":"related"},{"name":"pre-mRNA 3'-end processing endonuclease","type":"narrow"},{"name":"ribonuclease 3 activity","type":"related"}],"termid":"GO:0004525","terms_by_termid":{"GO:0004525":null}}


id: PBO:0060203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin like 1","termid":"PBO:0060203"}


id: PBO:0081662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 585A","termid":"PBO:0081662"}


id: PR:Q09712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.05","synonyms":[{"name":"GPI mannosyltransferase II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpi18","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09712"}


id: GO:0008992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Ala-Gly bond in repressor lexA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete repressor LexA activity (obsolete GO:0008992)","synonyms":[{"name":"LexA repressor","type":"related"},{"name":"repressor LexA activity","type":"exact"},{"name":"repressor lexA","type":"related"}],"termid":"GO:0008992"}


id: MOD:00108
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-tyrosine amide.","definition_xrefs":["PubMed:1377792","PubMed:3562898","PubMed:6509012","RESID:AA0099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tyrosine amide","synonyms":[{"name":"(2S)-2-amino-3-(4-hydoxyphenyl)propanamide","type":"exact"},{"name":"L-tyrosine amide","type":"exact"},{"name":"MOD_RES Tyrosine amide","type":"exact"},{"name":"TyrN","type":"exact"},{"name":"amidated L-tyrosine","type":"exact"},{"name":"tyrosinamide","type":"exact"}],"termid":"MOD:00108"}


id: PBO:0064666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 1","termid":"PBO:0064666"}


id: GO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"folic acid binding","synonyms":[{"name":"folate binding","type":"exact"},{"name":"vitamin B9 binding","type":"exact"},{"name":"vitamin M binding","type":"exact"}],"termid":"GO:0005542"}


id: PBO:0083118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor; required for pre-replication complex assembly","termid":"PBO:0083118"}


id: MONDO:0957874
data:
  {"annotated_genes":["SJAG_00459"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86655],"is_not":false,"summary":null,"term":"MONDO:0957874"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081428","UMLS:C5882672","MEDGEN:1850177","OMIM:620402"],"termid":"MONDO:0957874","terms_by_termid":{"MONDO:0957874":null},"xrefs":{"Monarch":{"xref_id":"0957874"}}}


id: PBO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta subunit Gnr1","termid":"PBO:0005272"}


id: MONDO:0042975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudoachondroplastic dysplasia 2 (obsolete MONDO:0042975)","secondary_identifiers":["GARD:4542","OMIM:264150","MEDGEN:418965","MESH:C535820","UMLS:C2931030"],"synonyms":[{"name":"pseudoachondroplastic dysplasia 2","type":"exact"},{"name":"recessive pseudoachondroplasia","type":"related"},{"name":"spondyloepiphyseal dysplasia pseudoachondroplastic 2","type":"related"}],"termid":"MONDO:0042975","xrefs":{"Monarch":{"xref_id":"0042975"}}}


id: PBO:0090842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein, human TMEM186 ortholog, implicated in respiratory complex assembly","termid":"PBO:0090842"}


id: GO:0043755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-ribazole 5'-phosphate + H2O = alpha-ribazole + phosphate.","definition_xrefs":["RHEA:24456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"alpha-ribazole phosphatase activity","secondary_identifiers":["GO:0019175","KEGG_REACTION:R04594","EC:3.1.3.73","MetaCyc:RXN-16788"],"synonyms":[{"name":"CobC","type":"related"},{"name":"alpha-ribazole-5'-P phosphatase activity","type":"exact"},{"name":"alpha-ribazole-5'-phosphate phosphohydrolase activity","type":"exact"}],"termid":"GO:0043755"}


id: PBO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 4","termid":"PBO:0043804"}


id: PBO:0082285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aquaglyceroporin, plasma membrane channel; involved in efflux of glycerol and xylitol, and in transport of acetate, arsenite, and antimonite; key factor in maintaining redox balance by mediating passive diffusion of glycerol; phosphorylated by Hog1p and Slt2p MAPK; deletion improves xylose fermentation; regulated by Rgc1p and Ask10p, which are regulated by Hog1p phosphorylation under osmotic stress; phosphorylation by Ypk1p required to maintain an open state","termid":"PBO:0082285"}


id: GO:0015021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the elimination of sulfate; appears to act on linkages between N-acetyl-D-glucosamine and uronate. Product is an unsaturated sugar.","definition_xrefs":["EC:4.2.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"heparin-sulfate lyase activity","secondary_identifiers":["MetaCyc:4.2.2.8-RXN"],"synonyms":[{"name":"[heparan sulfate]-sulfate lyase activity","type":"related"},{"name":"heparin-sulfate eliminase activity","type":"related"},{"name":"heparin-sulphate lyase activity","type":"exact"},{"name":"heparitin-sulfate lyase activity","type":"exact"},{"name":"heparitinase I","type":"related"},{"name":"heparitinase II","type":"related"}],"termid":"GO:0015021"}


id: PR:Q9P801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.17c gene.","definition_xrefs":["UniProtKB:Q9P801","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L9-like mitochondrial ribosomal protein SPCC777.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.17c","synonyms":[{"name":"54S ribosomal protein L9, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"Spom972h-SPCC777.17c","type":"exact"}],"termid":"PR:Q9P801"}


id: PBO:0050373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 76","termid":"PBO:0050373"}


id: MONDO:0030535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 2d, generalized, intermediate or severe, autosomal recessive","secondary_identifiers":["OMIM:619599","UMLS:C5562014","MEDGEN:1794224"],"synonyms":[{"name":"EBS2D","type":"exact"}],"termid":"MONDO:0030535","xrefs":{"Monarch":{"xref_id":"0030535"}}}


id: MONDO:0013123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the TLL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 6","secondary_identifiers":["OMIM:613087","DOID:0110111","UMLS:C2751315","MESH:C567764","MEDGEN:414348"],"synonyms":[{"name":"ASD6","type":"exact"},{"name":"TLL1 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in TLL1","type":"exact"},{"name":"atrial heart septal defect type 6","type":"exact"},{"name":"atrial septal defect 6","type":"exact"},{"name":"atrial septal defect type 6","type":"exact"}],"termid":"MONDO:0013123","xrefs":{"Monarch":{"xref_id":"0013123"}}}


id: PBO:0061060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 1","termid":"PBO:0061060"}


id: PBO:0046136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A2","termid":"PBO:0046136"}


id: GO:0072718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cisplatin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cisplatin","termid":"GO:0072718"}


id: GO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate.","definition_xrefs":["PMID:10727929","RHEA:20613","EC:2.8.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose 3-O-sulfotransferase activity","termid":"GO:0050694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"galactosylceramide sulfotransferase activity","secondary_identifiers":["MetaCyc:GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN","Reactome:R-HSA-9844587"],"synonyms":[{"name":"3'-phosphoadenosine-5'-phosphosulfate-cerebroside sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:galactosylceramide 3'-sulfotransferase activity","type":"related"},{"name":"GSase","type":"related"},{"name":"cerebroside sulfotransferase activity","type":"exact"},{"name":"galactocerebroside sulfotransferase activity","type":"related"},{"name":"galactolipid sulfotransferase activity","type":"related"},{"name":"galactosylceramide sulphotransferase activity","type":"exact"},{"name":"glycolipid sulfotransferase activity","type":"related"},{"name":"glycosphingolipid sulfotransferase activity","type":"related"}],"termid":"GO:0001733"}


id: FYPO:0008329
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in the plasma membrane is too low to detect.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"phosphatidylserine absent from plasma membrane","termid":"FYPO:0008329"}


id: MONDO:0020211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A keratoconus (disease) that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic keratoconus (obsolete MONDO:0020211)","secondary_identifiers":["Orphanet:98623"],"synonyms":[{"name":"syndrome associated with keratoconus (disease)","type":"exact"},{"name":"syndromic keratoconus (disease)","type":"exact"}],"termid":"MONDO:0020211","xrefs":{"Monarch":{"xref_id":"0020211"}}}


id: FYPO:0001715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of succinate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal succinate import","synonyms":[{"name":"abnormal succinate import across plasma membrane","type":"exact"},{"name":"abnormal succinate import during mitotic cell cycle","type":"related"},{"name":"abnormal succinate import during vegetative growth","type":"exact"},{"name":"abnormal succinate import into cell","type":"exact"},{"name":"abnormal succinate uptake","type":"exact"},{"name":"abnormal succinic acid import","type":"related"}],"termid":"FYPO:0001715"}


id: GO:1902898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acid methyl ester.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators","PMID:16570218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid methyl ester metabolic process","synonyms":[{"name":"FAME metabolic process","type":"exact"},{"name":"fatty acid methyl ester metabolism","type":"exact"}],"termid":"GO:1902898"}


id: MONDO:0005442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete type 1 diabetes nephropathy (obsolete MONDO:0005442)","termid":"MONDO:0005442","xrefs":{"Monarch":{"xref_id":"0005442"}}}


id: PBO:0088008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I HSP40 co-chaperone; involved in regulation of HSP90 and HSP70 functions; acts as an adaptor that helps Rsp5p recognize cytosolic misfolded proteins for ubiquitination after heat shock; critical for determining cell size at Start as a function of growth rate; involved in protein translocation across membranes; member of the DnaJ family; chimeric protein in which human p58IPK J domain replaces yeast Ydj1p J domain can complement yeast ydj1 mutant","termid":"PBO:0088008"}


id: GO:1900232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation on inanimate substrate.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of single-species biofilm formation","termid":"GO:1900191"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation on inanimate substrate","termid":"GO:1900231"},{"relation_name":"negatively_regulates","term_name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of single-species biofilm formation on inanimate substrate","synonyms":[{"name":"down regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"down-regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"downregulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"inhibition of single-species biofilm formation on inanimate substrate","type":"narrow"}],"termid":"GO:1900232"}


id: PBO:0017897
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EIF3E","termid":"PBO:0017897"}


id: PBO:0066458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 11, pseudogene","termid":"PBO:0066458"}


id: MONDO:1010900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the MFSD8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, MFSD8-related, dog","secondary_identifiers":["OMIA:001962-9615"],"synonyms":[{"name":"CLN7","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 7, dog","type":"related"}],"termid":"MONDO:1010900","xrefs":{"Monarch":{"xref_id":"1010900"}}}


id: PBO:0018150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated sorting nexin Atg20 (predicted)","termid":"PBO:0018150"}


id: GO:0019584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactonate, the anion of galactonic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactonate metabolic process","termid":"GO:0019583"},{"relation_name":"is_a","term_name":"aldonic acid catabolic process","termid":"GO:0046176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"galactonate catabolic process","synonyms":[{"name":"galactonate breakdown","type":"exact"},{"name":"galactonate catabolism","type":"exact"},{"name":"galactonate degradation","type":"exact"}],"termid":"GO:0019584"}


id: MONDO:0044996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the cerebral cortex.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral cortex disorder","secondary_identifiers":["UMLS:C1263847","SCTID:128128003","MEDGEN:688117"],"synonyms":[{"name":"cerebral cortex disease","type":"exact"},{"name":"cerebral cortex disease or disorder","type":"exact"},{"name":"disease of cerebral cortex","type":"exact"},{"name":"disease or disorder of cerebral cortex","type":"exact"},{"name":"disorder of cerebral cortex","type":"exact"}],"termid":"MONDO:0044996","xrefs":{"Monarch":{"xref_id":"0044996"}}}


id: PATO:0000612
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000612 relative orientation value (obsolete PATO:0000612)","termid":"PATO:0000612"}


id: FYPO:0005498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a greater extent than normal during a cellular response to miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription from CRE promoter","termid":"FYPO:0005495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription from CRE promoter during cellular response to miconazole","synonyms":[{"name":"expression of CRE target genes increased during cellular response to miconazole","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during mitotic cell cycle","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0005498"}


id: PBO:0050262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 40","termid":"PBO:0050262"}


id: GO:0050674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of urothelial cells, resulting in the expansion of a cell population. Urothelial cells make up a layer of transitional epithelium in the wall of the bladder, ureter, and renal pelvis, external to the lamina propria.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urothelial cell proliferation","termid":"GO:0050674"}


id: PBO:0028594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_activation_of_bipolar_cell_growth","termid":"PBO:0028594"}


id: PBO:0060862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 5","termid":"PBO:0060862"}


id: PBO:0111068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fbp1 upstream regulatory lncRNA c","termid":"PBO:0111068"}


id: PBO:0001280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAMP complex ATP-dependent RNA helicase (predicted)","termid":"PBO:0001280"}


id: FYPO:0002388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of riboflavin binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal riboflavin binding","termid":"FYPO:0002388"}


id: GO:0032988
data:
  {"annotated_genes":["SJAG_00206","SJAG_02560","SJAG_05025","SJAG_00597","SJAG_03301"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88095,78874,57266,75283,104838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000390"}]},"cv_name":"biological_process","definition":"The disaggregation of a protein-RNA complex into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"is_a","term_name":"protein-RNA complex organization","termid":"GO:0071826"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00206":null,"SJAG_00597":null,"SJAG_02560":null,"SJAG_03301":null,"SJAG_05025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-RNA complex disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA-protein complex disassembly","type":"exact"},{"name":"RNP complex disassembly","type":"exact"},{"name":"ribonucleoprotein complex disassembly","type":"exact"}],"termid":"GO:0032988","terms_by_termid":{"GO:0000390":null}}


id: MONDO:1012334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone spavin, non-human animal","termid":"MONDO:1011768"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone spavin, horse","secondary_identifiers":["OMIA:001232-9796"],"termid":"MONDO:1012334","xrefs":{"Monarch":{"xref_id":"1012334"}}}


id: GO:0031149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sorocarp stalk cell, any of the cellulose-covered cells that form the stalk of a sorocarp. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["PMID:4338436","GOC:mah","ISBN:0521583640","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"sorocarp stalk development","termid":"GO:0031150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp stalk cell differentiation","synonyms":[{"name":"stalk cell differentiation","type":"exact"}],"termid":"GO:0031149"}


id: GO:0005507
data:
  {"annotated_genes":["SJAG_04677","SJAG_01140","SJAG_01694","SJAG_02399","SJAG_00802","SJAG_00449","SJAG_03322","SJAG_04553","SJAG_01996","SJAG_MIT04","SJAG_00668","SJAG_05398","SJAG_MIT20"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61591,66623,69036,74651,75238,78160,78386,102443,107189,115369,117385,119362,119412],"is_not":false,"summary":null,"term":"GO:0005507"}]},"cv_name":"molecular_function","definition":"Binding to a copper (Cu) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_00668":null,"SJAG_00802":null,"SJAG_01140":null,"SJAG_01694":null,"SJAG_01996":null,"SJAG_02399":null,"SJAG_03322":null,"SJAG_04553":null,"SJAG_04677":null,"SJAG_05398":null,"SJAG_MIT04":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"copper ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"copper binding","type":"exact"},{"name":"copper/cadmium binding","type":"broad"}],"termid":"GO:0005507","terms_by_termid":{"GO:0005507":null}}


id: PBO:0071098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 100","termid":"PBO:0071098"}


id: FYPO:0002438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin cables that are shorter than normal and abnormally oriented within the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"short actin cables","termid":"FYPO:0002434"},{"relation_name":"has_part","term_name":"misoriented actin cables","termid":"FYPO:0002436"},{"relation_name":"is_a","term_name":"short actin cables","termid":"FYPO:0002434"},{"relation_name":"is_a","term_name":"misoriented actin cables","termid":"FYPO:0002436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"short, misoriented actin cables","synonyms":[{"name":"short, abnormally oriented actin cables","type":"exact"},{"name":"short, misoriented actin cables during mitotic cell cycle","type":"related"},{"name":"short, misoriented actin cables during vegetative growth","type":"exact"},{"name":"short, misoriented formin-nucleated actin cables","type":"exact"}],"termid":"FYPO:0002438"}


id: PBO:0046524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum to nucleus signaling 1","termid":"PBO:0046524"}


id: PATO:0000966
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000966 symmetry value (obsolete PATO:0000966)","termid":"PATO:0000966"}


id: GO:0019265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine by the transamination of glyoxylate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine biosynthetic process","termid":"GO:0006545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glycine biosynthetic process, by transamination of glyoxylate","synonyms":[{"name":"glycine anabolism, by transamination of glyoxylate","type":"exact"},{"name":"glycine formation, by transamination of glyoxylate","type":"exact"},{"name":"glycine synthesis, by transamination of glyoxylate","type":"exact"}],"termid":"GO:0019265"}


id: PBO:0047318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 2","termid":"PBO:0047318"}


id: PBO:0065925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member RAS oncogene family like 6","termid":"PBO:0065925"}


id: MONDO:0021144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant epithelial tumor of the ovary that is characterized by a predominance of clear and hobnail cells.","definition_xrefs":["NCIT:C40076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian clear cell tumor","secondary_identifiers":["MEDGEN:138040","UMLS:C0346164","ONCOTREE:CCOV"],"synonyms":[{"name":"clear cell ovarian cancer","type":"related"},{"name":"ovarian clear cell neoplasm","type":"exact"},{"name":"ovarian clear cell tumor","type":"exact"}],"termid":"MONDO:0021144","xrefs":{"Monarch":{"xref_id":"0021144"}}}


id: PBO:0029679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_nitrogen_starvation","termid":"PBO:0029679"}


id: FYECO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a sugar was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sugar","termid":"FYECO:0000024"}


id: PBO:0063985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 19","termid":"PBO:0063985"}


id: PBO:0042755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein X","termid":"PBO:0042755"}


id: PBO:0001403
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle regulated","termid":"PBO:0001403"}


id: GO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the tissue kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"regulates","term_name":"tissue kallikrein-kinin cascade","termid":"GO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of tissue kallikrein-kinin cascade","synonyms":[{"name":"regulation of glandular kallikrein-kinin cascade","type":"exact"}],"termid":"GO:0002382"}


id: FYPO:0007093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs transcribed from genes encoding ribosomal proteins measured in a cell is higher than normal (i.e. higher than observed in wild-type cells).","definition_xrefs":["PomBase:mah","PMID:28388826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of ribosomal protein gene mRNA during vegetative growth","synonyms":[{"name":"increased level of ribosomal protein gene RNA during vegetative growth","type":"exact"},{"name":"increased level of ribosomal protein gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of ribosomal protein gene transcripts during vegetative growth","type":"exact"},{"name":"increased ribosomal protein gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0007093"}


id: PBO:0007962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotyrosyl phosphatase activator Ypa2","termid":"PBO:0007962"}


id: PBO:0062224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AS member 1","termid":"PBO:0062224"}


id: MONDO:0008913
data:
  {"annotated_genes":["SJAG_01519"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85349],"is_not":false,"summary":null,"term":"MONDO:0008913"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"cardiac valvular defect","termid":"MONDO:0031323"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01519":null},"genotype_count":0,"is_obsolete":false,"name":"cardiac valvular defect, developmental","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080633","MEDGEN:1823949","MESH:C565882","OMIM:212093","UMLS:C5774175"],"synonyms":[{"name":"CARDIAC valvular defect, developmental","type":"related"},{"name":"CVDD","type":"related"},{"name":"cardiac valvular defect, developmental","type":"exact"}],"termid":"MONDO:0008913","terms_by_termid":{"MONDO:0008913":null},"xrefs":{"Monarch":{"xref_id":"0008913"}}}


id: PBO:0053051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 2","termid":"PBO:0053051"}


id: MONDO:0006194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A primary, usually low grade adenocarcinoma of the endometrium in which the majority of the malignant epithelial cells contain abundant intracytoplasmic mucin.","definition_xrefs":["NCIT:C40144"],"gene_count":0,"genotype_count":0,"name":"obsolete endometrial mucinous adenocarcinoma (obsolete MONDO:0006194)","termid":"MONDO:0006194","xrefs":{"Monarch":{"xref_id":"0006194"}}}


id: GO:0015132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of prostaglandins from one side of a membrane to the other. A prostaglandin is any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid transmembrane transporter activity","termid":"GO:0071714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"prostaglandin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5661188","Reactome:R-HSA-9032327","Reactome:R-HSA-879528"],"synonyms":[{"name":"prostaglandin/thromboxane transporter activity","type":"broad"}],"termid":"GO:0015132"}


id: FYPO:0006349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to chromatin at promoter","synonyms":[{"name":"abolished protein localisation to chromatin at promoter during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at promoter element","type":"exact"},{"name":"protein localization to chromatin at promoter abolished","type":"exact"}],"termid":"FYPO:0006349"}


id: PR:P87057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nhp6 gene.","definition_xrefs":["UniProtKB:P87057","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-histone chromosomal protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.09c","synonyms":[{"name":"Spom972h-nhp6","type":"exact"}],"termid":"PR:P87057"}


id: MOD:00266
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a peptide bond between a C-terminal L-glutamic acid residue and one or more free L-glutamic acid molecules to form N-(L-glutamyl)-poly-L-glutamic acid.","definition_xrefs":["RESID:AA0261","PubMed:2570347","PubMed:328274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-L-glutamyl-poly-L-glutamic acid","termid":"MOD:00266"}


id: PBO:0064998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 5","termid":"PBO:0064998"}


id: PBO:0053662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 839","termid":"PBO:0053662"}


id: SO:0001644
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An engineered vector that is able to take part in homologous recombination in a host with the intent of introducing site specific genomic modifications.","definition_xrefs":["MGD:tm","PMID:10354467"],"direct_ancestors":[{"relation_name":"has_part","term_name":"homologous_region","termid":"SO:0000853"},{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"targeting_vector","synonyms":[{"name":"targeting vector","type":"related"}],"termid":"SO:0001644"}


id: MONDO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thrombophlebitis that involves the iliac vein.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombophlebitis","termid":"MONDO:0002800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iliac vein thrombophlebitis","secondary_identifiers":["DOID:10880","SCTID:42861008","ICD9:451.81","MEDGEN:578307","UMLS:C0347887"],"synonyms":[{"name":"iliac vein thrombophlebitis","type":"exact"},{"name":"phlebitis and thrombophlebitis of the iliac vein","type":"exact"},{"name":"thrombophlebitis of iliac vein","type":"exact"}],"termid":"MONDO:0001148","xrefs":{"Monarch":{"xref_id":"0001148"}}}


id: PBO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain","termid":"PBO:0000496"}


id: MONDO:0023005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double uterus-hemivagina-renal agenesis","secondary_identifiers":["UMLS:C4302552","MEDGEN:928221"],"termid":"MONDO:0023005","xrefs":{"Monarch":{"xref_id":"0023005"}}}


id: MONDO:0006684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Increased intracellular or extracellular fluid in brain tissue. Cytotoxic brain edema (swelling due to increased intracellular fluid) is indicative of a disturbance in cell metabolism, and is commonly associated with hypoxic or ischemic injuries (see hypoxia, brain). An increase in extracellular fluid may be caused by increased brain capillary permeability (vasogenic edema), an osmotic gradient, local blockages in interstitial fluid pathways, or by obstruction of csf flow (e.g., obstructive hydrocephalus). (From Childs Nerv Syst 1992 Sep; 8(6):301-6)","definition_xrefs":["MESH:D001929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain edema","secondary_identifiers":["SCTID:2032001","UMLS:C0006114","EFO:1000845","ICD9:348.5","MedDRA:10006121","DOID:4724","MEDGEN:2337"],"synonyms":[{"name":"intracranial swelling","type":"exact"},{"name":"wet brain","type":"exact"}],"termid":"MONDO:0006684","xrefs":{"Monarch":{"xref_id":"0006684"}}}


id: PBO:0059034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 23B","termid":"PBO:0059034"}


id: PBO:0088815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ragulator complex subunit, human LAMTOR4 ortholog","termid":"PBO:0088815"}


id: GO:0039587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces the activity of host tetherin activity. Tetherin (also known as BST2) is an alpha interferon-inducible cellular factor that impairs the release of many enveloped viruses. By blocking tetherin activity, many viruses circumvent its antiviral effects.","definition_xrefs":["PMID:22493439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated-mediated suppression of host tetherin activity","secondary_identifiers":["VZ:665"],"synonyms":[{"name":"evasion of suppression of viral release by host via inhibition of host tetherin activity","type":"narrow"},{"name":"inhibition of host BST2/Tetherin by virus","type":"exact"},{"name":"suppression by virus of host tetherin activity","type":"exact"}],"termid":"GO:0039587"}


id: FYPO:0000879
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000879"}


id: GO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"}


id: MONDO:0000736
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014169"}]},"cv_name":"mondo","definition":"A pigmentation disease characterized by reticulate hyper- and hypo-pigmentated macules in a generalized distribution.","definition_xrefs":["PMID:12372090","DOID:0060304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyschromatosis universalis hereditaria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2930995","GARD:1996","MEDGEN:419691","OMIMPS:127500","MESH:C535730","Orphanet:241","SCTID:239082002","NCIT:C173131"],"synonyms":[{"name":"DUH","type":"related"},{"name":"dyschromatosis universalis","type":"exact"}],"termid":"MONDO:0000736","terms_by_termid":{"MONDO:0014169":null},"xrefs":{"Monarch":{"xref_id":"0000736"}}}


id: PBO:0091124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Rsa1","termid":"PBO:0091124"}


id: PBO:0082141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Chs3p (chitin synthase III) during vegetative growth; recruits Chs3p to the bud neck via interaction with Bni4p; SKT5 has a paralog, SHC1, that arose from the whole genome duplication","termid":"PBO:0082141"}


id: GO:0006297
data:
  {"annotated_genes":["SJAG_02908","SJAG_02818","SJAG_00814","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74518,75362,77226,80419],"is_not":false,"summary":null,"term":"GO:0006297"}]},"cv_name":"biological_process","definition":"Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02527":null,"SJAG_02818":null,"SJAG_02908":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA gap filling","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5696397"],"termid":"GO:0006297","terms_by_termid":{"GO:0006297":null}}


id: GO:0170048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of D-alanine from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22418438","PMID:25425233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-alanine transmembrane transport","termid":"GO:0042941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"D-alanine import across plasma membrane","synonyms":[{"name":"D-alanine import","type":"broad"},{"name":"D-alanine import into cell","type":"exact"},{"name":"D-alanine uptake","type":"exact"}],"termid":"GO:0170048"}


id: MONDO:0003449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syringocystadenoma papilliferum (obsolete MONDO:0003449)","termid":"MONDO:0003449","xrefs":{"Monarch":{"xref_id":"0003449"}}}


id: MONDO:0019867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 8 is a chromosomal disorder defined by the presence of three copies of chromosome 8 in some cells of the organism. It is characterized by facial dysmorphism, mild intellectual deficit and joint, urinary, cardiac and skeletal anomalies.","definition_xrefs":["Orphanet:96061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 8, trisomy","termid":"MONDO:0043452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 8","secondary_identifiers":["MEDGEN:797340","MESH:C537940","SCTID:717335009","MedDRA:10053916","GARD:5359","UMLS:C1096527"],"synonyms":[{"name":"Mosaic trisomy chromosome 8","type":"related"},{"name":"Mosaic trisomy type 8","type":"exact"},{"name":"Warkany syndrome","type":"exact"},{"name":"trisomy 8 mosaicism","type":"related"}],"termid":"MONDO:0019867","xrefs":{"Monarch":{"xref_id":"0019867"}}}


id: PBO:0087599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; null mutant is sensitive to drug inducing secretion of vacuolar cargo; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0087599"}


id: MONDO:1011064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal hypoplasia, unilateral that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia, unilateral, non-human animal","termid":"MONDO:1010265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal hypoplasia, unilateral, pig","secondary_identifiers":["OMIA:000855-9823"],"termid":"MONDO:1011064","xrefs":{"Monarch":{"xref_id":"1011064"}}}


id: GO:0046137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"negative regulation of vitamin metabolic process","synonyms":[{"name":"down regulation of vitamin metabolic process","type":"exact"},{"name":"down-regulation of vitamin metabolic process","type":"exact"},{"name":"downregulation of vitamin metabolic process","type":"exact"},{"name":"inhibition of vitamin metabolic process","type":"narrow"},{"name":"negative regulation of vitamin metabolism","type":"exact"}],"termid":"GO:0046137"}


id: MONDO:0006523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory skin condition affecting children. It is often associated with Epstein-Barr virus infection, hepatitis B infection or cytomegalovirus infection. It is characterized by the presence of cutaneous rashes and patches on the palms and soles. The trunk is not affected.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acrodermatitis","secondary_identifiers":["MESH:D000169","SCTID:8197001","UMLS:C0001197","DOID:2722","CSP:4008-0032","MEDGEN:1301","EFO:1000664","NCIT:C84532","ICD9:686.8"],"termid":"MONDO:0006523","xrefs":{"Monarch":{"xref_id":"0006523"}}}


id: MONDO:0025598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An pneumonia caused by infection with Chlamydia.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlamydia trachomatis infectious disease","termid":"MONDO:0005701"},{"relation_name":"is_a","term_name":"pneumonia caused by gram negative bacteria","termid":"MONDO:0041850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia caused by chlamydia","secondary_identifiers":["ICD9:483.1","MEDGEN:452440","SCTID:233609002","UMLS:C0339959","DOID:0040083","MESH:D061387"],"synonyms":[{"name":"Chlamydia caused pneumonia","type":"exact"},{"name":"Chlamydia pneumonia","type":"exact"},{"name":"chlamydia pneumonia","type":"exact"},{"name":"chlamydial pneumonia","type":"exact"}],"termid":"MONDO:0025598","xrefs":{"Monarch":{"xref_id":"0025598"}}}


id: FYPO:0007465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein localizes to chromatin over a different spatial extent than normal. The protein may localize to a larger or smaller region than normal, or its localization may be shifted along the length of the chromosome.","definition_xrefs":["PMID:18957202","PMID:31615333","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"altered spatial extent of protein localization to chromatin","synonyms":[{"name":"abnormal spatial extent of protein localization to chromatin","type":"exact"},{"name":"altered spatial extent of protein localisation to chromatin","type":"exact"},{"name":"altered spatial extent of protein localization to chromatin during mitotic cell cycle","type":"related"},{"name":"altered spatial extent of protein localization to chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007465"}


id: PBO:0109513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UCA1 antisense RNA 1","termid":"PBO:0109513"}


id: PBO:0031110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_stress","termid":"PBO:0031110"}


id: GO:0043944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042174"},{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"is_a","term_name":"negative regulation of asexual reproduction","termid":"GO:1903665"},{"relation_name":"negatively_regulates","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"}


id: PBO:0055308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2735","termid":"PBO:0055308"}


id: GO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of complement activation by the lectin pathway.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation, lectin pathway","termid":"GO:0001868"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"negative regulation of complement activation","termid":"GO:0045916"},{"relation_name":"negatively_regulates","term_name":"complement activation, lectin pathway","termid":"GO:0001867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement activation, lectin pathway","synonyms":[{"name":"down regulation of complement activation, lectin pathway","type":"exact"},{"name":"down-regulation of complement activation, lectin pathway","type":"exact"},{"name":"downregulation of complement activation, lectin pathway","type":"exact"},{"name":"inhibition of complement activation, lectin pathway","type":"narrow"},{"name":"negative regulation of complement cascade, lectin pathway","type":"exact"}],"termid":"GO:0001869"}


id: FYPO:0006985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the silent mating-type cassette than normal, such that it extends beyond the IRL boundary element.","definition_xrefs":["PMID:26518661","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRL","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRL during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRL during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRL","type":"exact"}],"termid":"FYPO:0006985"}


id: GO:0008079
data:
  {"annotated_genes":["SJAG_02189","SJAG_03232","SJAG_02812","SJAG_01696","SJAG_04283","SJAG_01518","SJAG_02601","SJAG_00338","SJAG_00308","SJAG_05221"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105030,109497,109498],"is_not":false,"summary":null,"term":"GO:0008079"},{"annotations":[66492,107500,69209,72798,116365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003747"},{"annotations":[98975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016150"},{"annotations":[74148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016149"}]},"cv_name":"molecular_function","definition":"Functions in the termination of translation.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation factor activity","termid":"GO:0180051"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00338":null,"SJAG_01518":null,"SJAG_01696":null,"SJAG_02189":null,"SJAG_02601":null,"SJAG_02812":null,"SJAG_03232":null,"SJAG_04283":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"translation termination factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008079","terms_by_termid":{"GO:0003747":null,"GO:0008079":null,"GO:0016149":null,"GO:0016150":null}}


id: FYPO:0003383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tert-butyl hydroperoxide (TBHP or t-BOOH) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to tert-butyl hydroperoxide","synonyms":[{"name":"resistance to 2-methyl-prop-2-yl-hydroperoxide","type":"exact"},{"name":"resistance to TBHP","type":"exact"},{"name":"resistance to t-BOOH","type":"exact"},{"name":"resistance to tert-butyl hydroperoxide during mitotic cell cycle","type":"related"},{"name":"resistance to tert-butyl hydroperoxide during vegetative growth","type":"exact"},{"name":"resistant to tert-butyl hydroperoxide","type":"exact"}],"termid":"FYPO:0003383"}


id: PBO:0034498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_cardiolipin_level","termid":"PBO:0034498"}


id: GO:0052787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The breakdown of large alpha-linked polysaccharides by hydrolysis of (1->4)-alpha-D-glucosidic linkages to yield maltopentaose.","definition_xrefs":["GOC:mengo_curators","PMID:7511484","PMID:9406414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"alpha-linked polysaccharide catabolism to maltopentaose","synonyms":[{"name":"alpha-amylase-mediated polysaccharide catabolism, producing maltopentaose","type":"exact"},{"name":"maltopentaose-forming alpha-amylase activity","type":"related"}],"termid":"GO:0052787"}


id: FYPO:0000944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a normal morphology (i.e. size, shape, or structure). An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal spore morphology","termid":"FYPO:0000943"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000004"],"is_obsolete":false,"name":"inviable spore with normal morphology","synonyms":[{"name":"lethal; spore with normal morphology","type":"exact"},{"name":"spore germination abolished, normal spore morphology","type":"related"}],"termid":"FYPO:0000944"}


id: PBO:0087895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; activated by proteolytic processing in response to signals from the SPS sensor system for external amino acids; activates transcription of amino acid permease genes; STP2 has a paralog, STP1, that arose from the whole genome duplication","termid":"PBO:0087895"}


id: GO:0008045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["CL:0000100","GOC:pr","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor neuron axon guidance","synonyms":[{"name":"motoneuron axon guidance","type":"exact"},{"name":"motor axon guidance","type":"exact"},{"name":"motor axon pathfinding","type":"exact"}],"termid":"GO:0008045"}


id: MONDO:1011605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, pig","termid":"MONDO:1010577"},{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, pig","secondary_identifiers":["OMIA:000284-9823"],"termid":"MONDO:1011605","xrefs":{"Monarch":{"xref_id":"1011605"}}}


id: PR:Q9UUC2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- crs103 gene.","definition_xrefs":["UniProtKB:Q9UUC2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C365.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.01","synonyms":[{"name":"Spom972h-crs103","type":"exact"}],"termid":"PR:Q9UUC2"}


id: PBO:0111778
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYRK subfamily","termid":"PBO:0111778"}


id: MONDO:1010543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic fibrosis that occurs in domestic ferret.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic fibrosis, non-human animal","termid":"MONDO:1010043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic fibrosis, domestic ferret","secondary_identifiers":["OMIA:001794-9669"],"termid":"MONDO:1010543","xrefs":{"Monarch":{"xref_id":"1010543"}}}


id: FYPO:0005120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is greater than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during meiotic cell cycle","synonyms":[{"name":"increased RNA accumulation during meiotic cell cycle","type":"related"},{"name":"increased transcript level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005120"}


id: PBO:0082848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding transcription factor; activates transcription of the metallothionein genes CUP1-1 and CUP1-2 in response to elevated copper concentrations; required for regulation of copper genes in response to DNA-damaging reagents; CUP2 has a paralog, HAA1, that arose from the whole genome duplication","termid":"PBO:0082848"}


id: GO:0006269
data:
  {"annotated_genes":["SJAG_02627","SJAG_04994","SJAG_01698","SJAG_03722","SJAG_02172"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70755,75629,115854,116580,117665],"is_not":false,"summary":null,"term":"GO:0006269"}]},"cv_name":"biological_process","definition":"The synthesis of a short nucleotide polymer using one strand of unwound DNA as a template. The product is usually a RNA molecule between 4-15 nucleotides long that provides a free 3'-OH that can be extended by DNA-directed DNA polymerases. In certain conditions, for example in response to DNA damage, some primases synthesize a DNA primer.","definition_xrefs":["PMID:11395402","PMID:38203225","PMID:38492718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01698":null,"SJAG_02172":null,"SJAG_02627":null,"SJAG_03722":null,"SJAG_04994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"DNA replication, synthesis of primer","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA priming","type":"narrow"},{"name":"DNA replication, synthesis of DNA primer","type":"narrow"},{"name":"DNA replication, synthesis of RNA primer","type":"narrow"},{"name":"replication priming","type":"related"}],"termid":"GO:0006269","terms_by_termid":{"GO:0006269":null}}


id: SO:0001571
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby a new splice site is created due to the activation of a new donor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptic_splice_site_variant","termid":"SO:0001569"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_donor","synonyms":[{"name":"cryptic splice donor","type":"exact"}],"termid":"SO:0001571"}


id: GO:0010848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chromatin disassembly. Chromatin disassembly is the controlled breakdown of chromatin from a higher order structure into its simpler subcomponents, DNA, histones, and other proteins.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin disassembly (obsolete GO:0010848)","termid":"GO:0010848"}


id: PBO:0078996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trRNA-Thr (anticodon AGT) 3-1","termid":"PBO:0078996"}


id: PBO:0089071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phospholipid scramblase","termid":"PBO:0089071"}


id: MONDO:0000097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid dyshormonogenesis (obsolete MONDO:0000097)","termid":"MONDO:0000097","xrefs":{"Monarch":{"xref_id":"0000097"}}}


id: MONDO:8000000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection of the intervertebral disk space.","definition_xrefs":["PMID:27070599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral joint disorder","termid":"MONDO:0037847"},{"relation_name":"is_a","term_name":"infective arthritis","termid":"MONDO:0042485"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious discitis","secondary_identifiers":["EFO:1000900"],"termid":"MONDO:8000000","xrefs":{"Monarch":{"xref_id":"8000000"}}}


id: GO:0047028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 6-lactoyl-5,6,7,8-tetrahydropterin = NADPH + H+ + 6-pyruvoyltetrahydropterin.","definition_xrefs":["EC:1.1.1.220","MetaCyc:1.1.1.220-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin 2'-reductase activity","secondary_identifiers":["RHEA:11772"],"synonyms":[{"name":"6-lactoyl-5,6,7,8-tetrahydropterin:NADP+ 2'-oxidoreductase activity","type":"related"},{"name":"6-pyruvoyl tetrahydropterin (2'-oxo)reductase activity","type":"related"},{"name":"6-pyruvoyl-tetrahydropterin 2'-reductase activity","type":"related"},{"name":"6-pyruvoyltetrahydropterin reductase activity","type":"related"},{"name":"6PPH4(2'-oxo) reductase activity","type":"related"},{"name":"pyruvoyl-tetrahydropterin reductase activity","type":"related"}],"termid":"GO:0047028"}


id: PBO:0049965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 11","termid":"PBO:0049965"}


id: MONDO:0013583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occipital pachygyria and polymicrogyria","secondary_identifiers":["Orphanet:280640","OMIM:614115","UMLS:C3279875","GARD:17299","MEDGEN:481505"],"synonyms":[{"name":"OCCM","type":"related"},{"name":"cortical malformations, occipital","type":"related"},{"name":"occipital MCD","type":"exact"},{"name":"occipital malformations of cortical development","type":"exact"}],"termid":"MONDO:0013583","xrefs":{"Monarch":{"xref_id":"0013583"}}}


id: PBO:0085639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in inserting tail-anchored proteins into ER membranes; forms a complex with Mdy2p; highly conserved across species and homologous to human gene C7orf20","termid":"PBO:0085639"}


id: PBO:0113251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two type I myosin motors; involved in clathrin-mediated endocytosis; activation by TEDS site phosphorylation increases actin gliding, motor activity and ligand-induced endocytosis; contains proline-rich tail homology 2 (TH2) and SH3 domains; MYO5 deletion has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO5 has a paralog, MYO3, that arose from the whole genome duplication","termid":"PBO:0113251"}


id: GO:0099170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, acting in the postsynapse that results in modulation of chemical synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"postsynaptic modulation of chemical synaptic transmission","termid":"GO:0099170"}


id: PR:O13282
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19879:SF0","PRO:DNx","OMA:SCHPO04393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.03c","secondary_identifiers":["UniProtKB:O13282"],"synonyms":[{"name":"Spom972h-TAF5","type":"exact"},{"name":"TAFII-72 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID 72 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13282"}


id: PBO:0030868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cytoskeleton_organization","termid":"PBO:0030868"}


id: PBO:0055286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2713","termid":"PBO:0055286"}


id: PBO:0086974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of protein phosphatase PP4; presence of Psy4p in the PP4 complex (along with catalytic subunit Pph3p and Psy2p) is required for dephosphorylation of the histone variant H2AX, but not for dephosphorylation of Rad53p, during recovery from the DNA damage checkpoint; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; required for cisplatin resistance; homolog of mammalian R2","termid":"PBO:0086974"}


id: PBO:0049194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor delta type subunit 1","termid":"PBO:0049194"}


id: PBO:0060056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 3","termid":"PBO:0060056"}


id: PBO:0057362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ae-2","termid":"PBO:0057362"}


id: FYPO:0000709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is decreased relative to normal under nitrogen starvation conditions, such as in nitrogen-deficient minimal medium.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth","termid":"FYPO:0000046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth during nitrogen starvation","secondary_identifiers":["FYPO:0002124"],"synonyms":[{"name":"decreased cell population growth during nitrogen depletion","type":"exact"},{"name":"decreased cell population growth during nitrogen deprivation","type":"exact"},{"name":"decreased cell population growth in response to nitrogen starvation","type":"exact"},{"name":"hypersensitive to nitrogen starvation","type":"related"},{"name":"reduced cell population growth during nitrogen starvation","type":"related"},{"name":"sensitive to nitrogen depletion","type":"related"},{"name":"sensitive to nitrogen deprivation","type":"related"},{"name":"sensitive to nitrogen starvation","type":"related"},{"name":"slow cell population growth during nitrogen starvation","type":"narrow"},{"name":"slow cell population growth in nitrogen-deficient minimal medium","type":"related"},{"name":"slow growth during nitrogen starvation","type":"broad"}],"termid":"FYPO:0000709"}


id: SO:0001704
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 14th residue (a lysine), from the start of the H3 histone protein is acetylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K14_acetylation_site","synonyms":[{"name":"H3K14 acetylation site","type":"exact"},{"name":"H3K14ac","type":"exact"}],"termid":"SO:0001704"}


id: FYPO:0000074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of a drug than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to drug (obsolete FYPO:0000074)","synonyms":[{"name":"drug resistance","type":"exact"},{"name":"drug resistant","type":"exact"},{"name":"resistance to drug during vegetative growth","type":"exact"},{"name":"resistant to drugs","type":"exact"}],"termid":"FYPO:0000074"}


id: PR:O94291
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting nexin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.06c","secondary_identifiers":["UniProtKB:O94291"],"synonyms":[{"name":"SPBC887.06c","type":"related"},{"name":"Spom972h-SNX3","type":"exact"},{"name":"grd19","type":"related"}],"termid":"PR:O94291"}


id: PBO:0068572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 23, pseudogene","termid":"PBO:0068572"}


id: GO:1900408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to oxidative stress.","definition_xrefs":["GOC:mah","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidative stress","termid":"GO:1900407"},{"relation_name":"is_a","term_name":"negative regulation of response to oxidative stress","termid":"GO:1902883"},{"relation_name":"negatively_regulates","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to oxidative stress","synonyms":[{"name":"down regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"down regulation of cellular response to oxidative stress","type":"exact"},{"name":"down-regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"down-regulation of cellular response to oxidative stress","type":"exact"},{"name":"downregulation of adaptive response to oxidative stress","type":"narrow"},{"name":"downregulation of cellular response to oxidative stress","type":"exact"},{"name":"inhibition of adaptive response to oxidative stress","type":"narrow"},{"name":"inhibition of cellular response to oxidative stress","type":"narrow"},{"name":"negative regulation of adaptive response to oxidative stress","type":"narrow"}],"termid":"GO:1900408"}


id: MONDO:0015406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrofacial arteriovenous metameric syndrome","termid":"MONDO:0015405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrofacial arteriovenous metameric syndrome type 1","secondary_identifiers":["Orphanet:141194","MEDGEN:825947","GARD:19959","icd11.foundation:796738143","SCTID:703267003","UMLS:C3840102"],"synonyms":[{"name":"CAMS1","type":"exact"}],"termid":"MONDO:0015406","xrefs":{"Monarch":{"xref_id":"0015406"}}}


id: MONDO:0024327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impairment of the renal function due to chronic kidney damage.","definition_xrefs":["NCIT:C9438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney failure","termid":"MONDO:0001106"},{"relation_name":"is_a","term_name":"chronic kidney disease","termid":"MONDO:0005300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"chronic renal failure syndrome","secondary_identifiers":["UMLS:C0022661","ICD9:585.9","MESH:D051436","SCTID:90688005","NANDO:2100023","MEDGEN:9637"],"synonyms":[{"name":"CRF - chronic renal failure","type":"exact"},{"name":"Chronic renal disease","type":"exact"},{"name":"chronic kidney failure","type":"exact"},{"name":"chronic renal failure","type":"exact"},{"name":"chronic renal failure disease","type":"exact"},{"name":"kidney failure, chronic","type":"exact"}],"termid":"MONDO:0024327","xrefs":{"Monarch":{"xref_id":"0024327"}}}


id: PBO:0055292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2719","termid":"PBO:0055292"}


id: PBO:0072062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11","termid":"PBO:0072062"}


id: MONDO:0700003
data:
  {"annotated_genes":["SJAG_01156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"Disorder associated with pregnancy, childbirth, and puerperium.","direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01156":null},"genotype_count":0,"is_obsolete":false,"name":"obstetric disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700003","terms_by_termid":{"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0700003"}}}


id: PBO:0063651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 8","termid":"PBO:0063651"}


id: PBO:0031789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_fusion_during_conjugation","termid":"PBO:0031789"}


id: PBO:0045220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C9","termid":"PBO:0045220"}


id: SO:0001217
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for an RNA that can be translated into a protein.","direct_ancestors":[{"relation_name":"has_quality","term_name":"protein_coding","termid":"SO:0000010"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_coding_gene","synonyms":[{"name":"protein coding gene","type":"exact"}],"termid":"SO:0001217"}


id: GO:0044075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts vacuole organization in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25139904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host vacuole organization","synonyms":[{"name":"modulation by symbiont of host vacuole biogenesis","type":"related"},{"name":"modulation by symbiont of host vacuole organisation","type":"exact"},{"name":"modulation by symbiont of host vacuole organization","type":"exact"},{"name":"modulation of host vacuole organization by symbiont","type":"exact"},{"name":"regulation by symbiont of host vacuole organization","type":"exact"}],"termid":"GO:0044075"}


id: GO:0010460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency or rate of heart contraction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"positive regulation of heart contraction","termid":"GO:0045823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate","termid":"GO:0010460"}


id: GO:0003382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"epithelial cell development","termid":"GO:0002064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell morphogenesis","termid":"GO:0003382"}


id: MONDO:0043071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"aniridia","termid":"MONDO:0019172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Zazam Sheriff Phillips syndrome","secondary_identifiers":["MEDGEN:419768","UMLS:C2931300","MESH:C536723"],"synonyms":[{"name":"aniridia, ectopia lentis, abnormal upper incisors and intellectual disability","type":"related"},{"name":"aniridia, ectopia lentis, abnormal upper incisors and mental retardation","type":"related"},{"name":"aniridia, lens luxation, intellectual disability","type":"related"},{"name":"aniridia, lens luxation, mental retardation","type":"related"}],"termid":"MONDO:0043071","xrefs":{"Monarch":{"xref_id":"0043071"}}}


id: PBO:0069391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 651, pseudogene","termid":"PBO:0069391"}


id: PBO:0062486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 2","termid":"PBO:0062486"}


id: PBO:0027909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_hydroxyurea","termid":"PBO:0027909"}


id: MONDO:0800410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV-induced skin damage, susceptibility to","secondary_identifiers":["MEDGEN:394510","UMLS:C2678403"],"termid":"MONDO:0800410","xrefs":{"Monarch":{"xref_id":"0800410"}}}


id: PBO:0113012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atypical protein kinase; along with paralog, ALK2, required for proper spindle positioning and nuclear segregation following mitotic arrest, proper organization of formins and polarisome components in mitosis, and survival after spindle assembly checkpoint delay; regulates the morphogenesis checkpoint in response to polarity insults through inactivation of Mih1p; phosphorylated in response to DNA damage; similar to mammalian haspins","termid":"PBO:0113012"}


id: PBO:0083240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; expression increased by deletion of NAP1","termid":"PBO:0083240"}


id: GO:0097190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals which triggers the apoptotic death of a cell. The pathway starts with reception of a signal, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"apoptotic signaling pathway","secondary_identifiers":["Reactome:R-HSA-204998","Reactome:R-HSA-193681","GO:0008624","Reactome:R-HSA-75157"],"synonyms":[{"name":"apoptotic signalling pathway","type":"exact"},{"name":"induction of apoptosis by extracellular signals","type":"exact"}],"termid":"GO:0097190"}


id: PBO:0047653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 5","termid":"PBO:0047653"}


id: FYPO:0001541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of molybdenum ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular molybdenum level","synonyms":[{"name":"normal cellular molybdenum accumulation","type":"related"},{"name":"normal cellular molybdenum ion level","type":"exact"},{"name":"normal cellular molybdenum level during mitotic cell cycle","type":"related"},{"name":"normal cellular molybdenum level during vegetative growth","type":"exact"}],"termid":"FYPO:0001541"}


id: PBO:0091107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw3","termid":"PBO:0091107"}


id: PBO:0030443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_modification","termid":"PBO:0030443"}


id: MONDO:0020680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the bronchioles usually caused by the respiratory syncytial virus.","definition_xrefs":["NCIT:C39659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis","termid":"MONDO:0002465"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute bronchiolitis","secondary_identifiers":["UMLS:C0001311","ICD9:466.1","MEDGEN:113","SCTID:5505005","icd11.foundation:1310075986","ICD9:466.19"],"synonyms":[{"name":"Capillary pneumonia","type":"related"},{"name":"acute Bronchiolitis","type":"related"},{"name":"acute bronchiolitis","type":"exact"},{"name":"acute capillary bronchiolitis","type":"related"},{"name":"capillary pneumonia","type":"related"}],"termid":"MONDO:0020680","xrefs":{"Monarch":{"xref_id":"0020680"}}}


id: MONDO:1010855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Krabbe disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease, non-human animal","termid":"MONDO:1010170"},{"relation_name":"is_a","term_name":"lysosomal storage disease, dog","termid":"MONDO:1010860"},{"relation_name":"is_a","term_name":"leukodystrophy, dog","termid":"MONDO:1011005"},{"relation_name":"is_a","term_name":"peripheral neuropathy, dog","termid":"MONDO:1011007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Krabbe disease, dog","secondary_identifiers":["OMIA:000578-9615"],"termid":"MONDO:1010855","xrefs":{"Monarch":{"xref_id":"1010855"}}}


id: PBO:0058257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4635","termid":"PBO:0058257"}


id: GO:1904745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an Atg1/UKL1 kinase complex.","definition_xrefs":["GOC:dph","GO_REF:0000079","PMID:25139988","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"ATG1 kinase complex assembly","type":"exact"},{"name":"ATG1 kinase complex formation","type":"exact"},{"name":"ATG1-ATG13 complex assembly","type":"exact"},{"name":"ATG1-ATG13 complex formation","type":"exact"},{"name":"ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"Atg1p signalling complex assembly","type":"exact"},{"name":"Atg1p signalling complex formation","type":"exact"},{"name":"ULK1 signaling complex assembly","type":"exact"},{"name":"ULK1 signaling complex formation","type":"exact"},{"name":"ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1904745"}


id: PBO:0056348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 6","termid":"PBO:0056348"}


id: PBO:0036189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_without_chromosome_separation_with_centromeric_DNA_dissociated_from_spindle","termid":"PBO:0036189"}


id: GO:0090049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:rl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"},{"relation_name":"regulates","term_name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090049"}


id: PBO:0057856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3167","termid":"PBO:0057856"}


id: PBO:0058543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6089","termid":"PBO:0058543"}


id: PBO:0069608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 885, pseudogene","termid":"PBO:0069608"}


id: PBO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z4","termid":"PBO:0000427"}


id: PBO:0090161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I,II and III complex subunit Trs20","termid":"PBO:0090161"}


id: PBO:0064982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progenitor renewal associated non-coding RNA","termid":"PBO:0064982"}


id: PBO:0072653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 6","termid":"PBO:0072653"}


id: GO:0140337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to diacylglyceride and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0120013"],"is_obsolete":false,"name":"diacylglyceride transfer activity","synonyms":[{"name":"diacylglyceride carrier activity","type":"exact"}],"termid":"GO:0140337"}


id: FYPO:0004676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of purine-specific mismatch base pair DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal purine-specific mismatch base pair DNA N-glycosylase activity","termid":"FYPO:0004676"}


id: PBO:0004867
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.16.6","termid":"PBO:0004867"}


id: GO:0052742
data:
  {"annotated_genes":["SJAG_01571","SJAG_04537","SJAG_00114","SJAG_00296","SJAG_01863","SJAG_00638","SJAG_05330"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91543],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0098744"},{"annotations":[72111,76784,93553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004430"},{"annotations":[71767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016303"},{"annotations":[92170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052811"},{"annotations":[72919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000285"},{"annotations":[79817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016308"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a phosphatidylinositol = ADP + a phosphatidylinositol phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00296":null,"SJAG_00638":null,"SJAG_01571":null,"SJAG_01863":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"phosphatidylinositol kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1675773"],"synonyms":[{"name":"1-phosphatidylinositol kinase activity","type":"exact"}],"termid":"GO:0052742","terms_by_termid":{"GO:0000285":null,"GO:0004430":null,"GO:0016303":null,"GO:0016308":null,"GO:0052811":null,"GO:0098744":null}}


id: PBO:0063110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate androgen-regulated mucin-like protein 1","termid":"PBO:0063110"}


id: PBO:0051147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-29 (pseudogene)","termid":"PBO:0051147"}


id: PBO:0046684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1 pseudogene 2","termid":"PBO:0046684"}


id: PBO:0042791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 170","termid":"PBO:0042791"}


id: PBO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose Insensitive Transcription","termid":"PBO:0001589"}


id: PBO:0000963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Cysteine","termid":"PBO:0000963"}


id: PBO:0043347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colipase","termid":"PBO:0043347"}


id: GO:0140856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 2A at the lysine-13 residue.","definition_xrefs":["PMID:22980979","PMID:28624371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016746","GO:0016740","GO:0019787","GO:0004842"],"is_obsolete":false,"name":"histone H2AK13 ubiquitin ligase activity","synonyms":[{"name":"histone ubiquitin ligase activity (H2A-K13 specific)","type":"exact"}],"termid":"GO:0140856"}


id: PBO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine salvage haloacid dehalogenase-like hydrolase (predicted)","termid":"PBO:0001675"}


id: GO:0005343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: organic acid(out) + Na+(out) = organic acid(in) + Na+(in).","definition_xrefs":["TC:2.A.28.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid transmembrane transporter activity","termid":"GO:0005342"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"organic acid:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-8876312"],"synonyms":[{"name":"sodium/chloride-dependent organic acid cotransporter activity","type":"related"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"narrow"}],"termid":"GO:0005343"}


id: MONDO:0009530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lipoid proteinosis (LP) is a rare genodermatosis characterized clinically by mucocutaneous lesions, hoarseness developing in early childhood and, at times, neurological complications.","definition_xrefs":["Orphanet:530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"lipoid proteinosis","secondary_identifiers":["MEDGEN:6112","ICD9:272.8","icd11.foundation:326368380","UMLS:C0023795","DOID:14498","NANDO:2200608","MESH:D008065","OMIM:247100","SCTID:38692000","NCIT:C84829","GARD:3268"],"synonyms":[{"name":"Urbach Wiethe disease","type":"related"},{"name":"Urbach-Wiethe disease","type":"exact"},{"name":"hyalinosis cutis Et mucosae","type":"related"},{"name":"hyalinosis cutis et mucosae","type":"exact"},{"name":"lipid proteinosis","type":"exact"},{"name":"lipoid proteinosis","type":"exact"},{"name":"lipoid proteinosis of Urbach and Wiethe","type":"related"},{"name":"lipoproteinosis","type":"exact"}],"termid":"MONDO:0009530","xrefs":{"Monarch":{"xref_id":"0009530"}}}


id: PBO:0090943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type zinc finger protein, Prp19 complex subunit, RNA-binding Cwf2","termid":"PBO:0090943"}


id: PBO:0071058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 60","termid":"PBO:0071058"}


id: MONDO:0014857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without anomalies of the brain, eye, or heart","secondary_identifiers":["MEDGEN:934739","EFO:0009645","OMIM:616975","Orphanet:494344","GARD:17902","UMLS:C4310772"],"synonyms":[{"name":"NEDBEH","type":"exact"},{"name":"neurodevelopmental disorder with or without anomalies of the brain, eye, or heart","type":"exact"},{"name":"neurodevelopmental disorder with or without anomalies of the brain, eye, or heart; NEDBEH","type":"exact"},{"name":"rere-related neurodevelopmental syndrome","type":"exact"}],"termid":"MONDO:0014857","xrefs":{"Monarch":{"xref_id":"0014857"}}}


id: PBO:0081943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ribbon domain containing 2","termid":"PBO:0081943"}


id: PBO:0068984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 228, pseudogene","termid":"PBO:0068984"}


id: GO:0019505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving resorcinol (C6H4(OH)2), a benzene derivative with many applications, including dyes, explosives, resins and as an antiseptic.","definition_xrefs":["PMID:33145","PMID:7217008","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"resorcinol metabolic process","secondary_identifiers":["MetaCyc:P343-PWY"],"synonyms":[{"name":"1,3-benzenediol metabolic process","type":"exact"},{"name":"1,3-benzenediol metabolism","type":"exact"},{"name":"1,3-dihydroxybenzene metabolic process","type":"exact"},{"name":"1,3-dihydroxybenzene metabolism","type":"exact"},{"name":"resorcinol metabolism","type":"exact"}],"termid":"GO:0019505"}


id: PBO:0067096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 134, pseudogene","termid":"PBO:0067096"}


id: MONDO:0010958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac arrhythmia, ankyrin-B-related","secondary_identifiers":["MEDGEN:370181","GARD:10432","DOID:0111700","OMIM:600919","SCTID:764457005","UMLS:C1970119","DOID:0111701"],"synonyms":[{"name":"LQT4","type":"related"},{"name":"ankyrin-B syndrome","type":"exact"},{"name":"cardiac arrhythmia, ankyrin-b-related","type":"exact"}],"termid":"MONDO:0010958","xrefs":{"Monarch":{"xref_id":"0010958"}}}


id: MONDO:0017125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculofaciocardiodental syndrome (obsolete MONDO:0017125)","termid":"MONDO:0017125","xrefs":{"Monarch":{"xref_id":"0017125"}}}


id: PBO:0025442
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocystinuria","termid":"PBO:0025442"}


id: GO:0003128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the lateral mesoderm into the area in which the heart will develop.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"heart formation","termid":"GO:0060914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart field specification","termid":"GO:0003128"}


id: MONDO:0024461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign diffuse vascular proliferation usually occurring in young adults. It is characterized by the formation of capillary-sized and cavernous vascular spaces. Patients present with diffuse persistent swelling.","definition_xrefs":["NCIT:C27503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign blood vessel neoplasm","termid":"MONDO:0024286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomatosis","secondary_identifiers":["MESH:D000798","SCTID:205562004","UMLS:C0002992","MEDGEN:1931"],"synonyms":[{"name":"angiomatoses","type":"related"},{"name":"angiomatosis","type":"exact"},{"name":"diffuse angiomatosis","type":"exact"},{"name":"diffuse hemangioma","type":"exact"},{"name":"multiple hemangiomas","type":"exact"}],"termid":"MONDO:0024461","xrefs":{"Monarch":{"xref_id":"0024461"}}}


id: GO:1901647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synoviocyte proliferation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of synoviocyte proliferation","termid":"GO:1901645"},{"relation_name":"positively_regulates","term_name":"synoviocyte proliferation","termid":"GO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synoviocyte proliferation","synonyms":[{"name":"activation of synoviocyte proliferation","type":"narrow"},{"name":"up regulation of synoviocyte proliferation","type":"exact"},{"name":"up-regulation of synoviocyte proliferation","type":"exact"},{"name":"upregulation of synoviocyte proliferation","type":"exact"}],"termid":"GO:1901647"}


id: PBO:0057256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 483","termid":"PBO:0057256"}


id: GO:1990635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dendrite of the dendritic tree that is closest to the neuronal cell body (the soma).","definition_xrefs":["GOC:bc","PMID:16899232","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"proximal dendrite","termid":"GO:1990635"}


id: PBO:0061920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily E member 3 (gene/pseudogene)","termid":"PBO:0061920"}


id: PBO:0018098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L15 Mrp15 (predicted)","termid":"PBO:0018098"}


id: GO:0030710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of border follicle cell delamination","synonyms":[{"name":"regulation of border cell delamination","type":"broad"}],"termid":"GO:0030710"}


id: GO:0102872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-palmitoyl-2-linoleoyl-phosphatidylcholine + O2 + a reduced electron acceptor = 1-16:0-2-18:3-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:15538555","PMID:8102138"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-16:0-2-18:2-phosphatidylcholine desaturase activity (obsolete GO:0102872)","termid":"GO:0102872"}


id: PBO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 3","termid":"PBO:0061064"}


id: PBO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.86","termid":"PBO:0002277"}


id: PBO:0057013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 103a-2","termid":"PBO:0057013"}


id: PBO:0063111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARM1 antisense RNA 1","termid":"PBO:0063111"}


id: PBO:0043225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 4","termid":"PBO:0043225"}


id: MONDO:0001485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mood disorder that is characterized by mood reactivity (paradoxical anhedonia) and positivity, significant weight gain or increased appetite (\\\"comfort eating\\\"), excessive sleep or somnolence (hypersomnia), a sensation of heaviness in limbs known as leaden paralysis, and significant social impairment as a consequence of hypersensitivity to perceived interpersonal rejection.","definition_xrefs":["DOID:12294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical depressive disorder","secondary_identifiers":["MEDGEN:509593","UMLS:C0154437","ICD9:296.82","SCTID:191659001"],"synonyms":[{"name":"atypical depression","type":"exact"}],"termid":"MONDO:0001485","xrefs":{"Monarch":{"xref_id":"0001485"}}}


id: PBO:0064273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G6","termid":"PBO:0064273"}


id: FYPO:0001469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases to a greater extent than normal following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal steady-state intracellular calcium level following extracellular calcium stimulus","termid":"FYPO:0001468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased steady-state intracellular calcium level following extracellular calcium stimulus","synonyms":[{"name":"greater increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"},{"name":"increased steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001469"}


id: GO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vinculin-containing myofibril attachment structure of striated muscle that connects sarcomeres to the extracellular matrix. In nematode body wall muscle, the dense body performs the dual role of Z-disk and costamere.","definition_xrefs":["GOC:kmv","PMID:17492481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"striated muscle dense body","termid":"GO:0055120"}


id: PBO:0079098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 11-1","termid":"PBO:0079098"}


id: MONDO:0005501
data:
  {"annotated_genes":["SJAG_01459","SJAG_03865","SJAG_03158","SJAG_03552","SJAG_01960","SJAG_04363","SJAG_04096","SJAG_00041","SJAG_02211","SJAG_01940","SJAG_01071","SJAG_00578","SJAG_04697","SJAG_03054"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012637"},{"annotations":[86515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013281"},{"annotations":[87356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013325"},{"annotations":[86780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013810"},{"annotations":[87261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012635"},{"annotations":[86686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957540"},{"annotations":[86566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957820"},{"annotations":[87210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054559"},{"annotations":[85884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859356"},{"annotations":[85883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859357"},{"annotations":[85942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"},{"annotations":[86910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011629"},{"annotations":[87246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010478"},{"annotations":[86479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013870"}]},"cv_name":"mondo","definition":"A congenital disorder of glycosylation that involves malfunctioning trimming/processing of the protein-bound oligosaccharide chain.","definition_xrefs":["DOID:0050571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00578":null,"SJAG_01071":null,"SJAG_01459":null,"SJAG_01940":null,"SJAG_01960":null,"SJAG_02211":null,"SJAG_03054":null,"SJAG_03158":null,"SJAG_03552":null,"SJAG_03865":null,"SJAG_04096":null,"SJAG_04363":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0005546","OMIMPS:212066","UMLS:C5574948","MESH:C535747","MEDGEN:1812737"],"synonyms":[{"name":"B4GALT1-CDG","type":"related"},{"name":"B4GALT1-CDG (CDG-2d)","type":"related"},{"name":"MGAT2-CDG","type":"related"},{"name":"MGAT2-CDG (CDG-2a)","type":"related"},{"name":"MOGS-CDG","type":"related"},{"name":"MOGS-CDG (CDG-2b)","type":"related"},{"name":"congenital disorder of glycosylation type II","type":"exact"},{"name":"congenital disorders of glycosylation, type II","type":"exact"}],"termid":"MONDO:0005501","terms_by_termid":{"MONDO:0009953":null,"MONDO:0010478":null,"MONDO:0011629":null,"MONDO:0012635":null,"MONDO:0012637":null,"MONDO:0013281":null,"MONDO:0013325":null,"MONDO:0013810":null,"MONDO:0013870":null,"MONDO:0054559":null,"MONDO:0859356":null,"MONDO:0859357":null,"MONDO:0957540":null,"MONDO:0957820":null},"xrefs":{"Monarch":{"xref_id":"0005501"}}}


id: PBO:0065017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 2 pseudogene 1","termid":"PBO:0065017"}


id: PBO:0088482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S24","termid":"PBO:0088482"}


id: MONDO:0035363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete IRF2BPL-related regressive neurodevelopmental disorder-dystonia-seizures syndrome (obsolete MONDO:0035363)","termid":"MONDO:0035363","xrefs":{"Monarch":{"xref_id":"0035363"}}}


id: MONDO:0032649
data:
  {"annotated_genes":["SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86589],"is_not":false,"summary":null,"term":"MONDO:0032649"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00624":null},"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618275","DOID:0080582","GARD:16335","MEDGEN:1648477","UMLS:C4748930"],"synonyms":[{"name":"HYPOTRICHOSIS 14","type":"related"},{"name":"HYPT14","type":"related"}],"termid":"MONDO:0032649","terms_by_termid":{"MONDO:0032649":null},"xrefs":{"Monarch":{"xref_id":"0032649"}}}


id: PBO:0061432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 5, pseudogene","termid":"PBO:0061432"}


id: PBO:0045203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B13","termid":"PBO:0045203"}


id: GO:0010354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a prenyl group from one compound (donor) to homogentisic acid.","definition_xrefs":["PMID:16989822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}


id: PBO:0047045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 107 member B","termid":"PBO:0047045"}


id: PBO:0055871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC2 antisense RNA 1","termid":"PBO:0055871"}


id: FYPO:0005503
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119780],"is_not":false,"summary":null,"term":"FYPO:0005503"}],"single_locus_phenotype":[{"annotations":[119523,119524,119526,119774],"is_not":false,"summary":null,"term":"FYPO:0005503"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized to both cell tips is instead found at only one tip.","definition_xrefs":["PomBase:mah","PMID:26749213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01143":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_04280":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormally monopolar protein localization to cell tip","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta"],"synonyms":[{"name":"abnormal monopolar protein localization to one cell end","type":"exact"},{"name":"abnormally monopolar protein localisation to cell tip","type":"exact"},{"name":"abnormally monopolar protein localization to cell end","type":"exact"},{"name":"abnormally monopolar protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"abnormally monopolar protein localization to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005503","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0005503":null}}


id: MONDO:0014054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lymphoproliferative syndrome in which the cause of the disease is a mutation in the CD27 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphoproliferative syndrome 2","secondary_identifiers":["OMIM:615122","DOID:0060708","MEDGEN:767454","UMLS:C3554540"],"synonyms":[{"name":"CD27 lymphoproliferative syndrome","type":"exact"},{"name":"LPFS2","type":"exact"},{"name":"lymphoproliferative syndrome 2","type":"exact"},{"name":"lymphoproliferative syndrome caused by mutation in CD27","type":"exact"},{"name":"lymphoproliferative syndrome type 2","type":"exact"}],"termid":"MONDO:0014054","xrefs":{"Monarch":{"xref_id":"0014054"}}}


id: PBO:0084282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the Golgi; required for targeting of the Arf-like GTPase Arl3p to the Golgi; multicopy suppressor of ypt6 null mutation","termid":"PBO:0084282"}


id: GO:0016987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Sigma factors act as the promoter specificity subunit of eubacterial and plant plastid multisubunit RNA polymerases, whose core subunit composition is often described as alpha(2)-beta-beta-prime. Although sigma does not bind DNA on its own, when combined with the core to form the holoenzyme, the sigma factor binds specifically to promoter elements. The sigma subunit is released once elongation begins.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0140110","GO:0003674","GO:0003700"],"is_obsolete":false,"name":"sigma factor activity","secondary_identifiers":["GO:0001053","GO:0000996"],"synonyms":[{"name":"DNA-dependent RNA polymerase promoter selection factor","type":"exact"},{"name":"bacterial sigma factor activity","type":"narrow"},{"name":"core DNA-dependent RNA polymerase binding promoter specificity activity","type":"exact"},{"name":"plastid sigma factor activity","type":"narrow"},{"name":"promoter selection factor activity","type":"narrow"},{"name":"sigma transcription factor","type":"exact"}],"termid":"GO:0016987"}


id: MONDO:0017850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sirenomelia is a rare, genetic, developmental defect during embryogenesis disorder characterized by fusion of the lower limbs and associated with some degree of lower extremity reduction and persistent vitelline artery. Patients also present severe malformations of the musculoskeletal system (e.g. sacral agenesis), as well as the urogenital and lower gastrointestinal tracts (e.g. renal agenesis, absent bladder, rectal/anal atresia, and absent internal genitalia). Most cases are stillborn, or die during, or shortly after, birth.","definition_xrefs":["Orphanet:3169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial caudal dysgenesis","termid":"MONDO:0010831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirenomelia","secondary_identifiers":["GARD:7652","MedDRA:10049216","MEDGEN:52357","UMLS:C0037205","icd11.foundation:473306797","SCTID:67254002","NORD:1720","NCIT:C118455"],"synonyms":[{"name":"Fused legs and feet","type":"related"},{"name":"Sirenomelus","type":"related"},{"name":"mermaid malformation","type":"related"},{"name":"mermaid syndrome","type":"related"},{"name":"sirenomelia sequence","type":"related"},{"name":"symmelia","type":"exact"}],"termid":"MONDO:0017850","xrefs":{"Monarch":{"xref_id":"0017850"}}}


id: GO:0051969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"regulates","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transmission of nerve impulse","synonyms":[{"name":"regulation of conduction of nerve impulse","type":"exact"}],"termid":"GO:0051969"}


id: MONDO:0014297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the PDE6D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 22","secondary_identifiers":["OMIM:615665","GARD:15999","UMLS:C3810278","DOID:0110991","MEDGEN:816608"],"synonyms":[{"name":"JBTS22","type":"exact"},{"name":"Joubert syndrome 22","type":"exact"},{"name":"Joubert syndrome caused by mutation in PDE6D","type":"exact"},{"name":"Joubert syndrome type 22","type":"exact"},{"name":"PDE6D Joubert syndrome","type":"exact"}],"termid":"MONDO:0014297","xrefs":{"Monarch":{"xref_id":"0014297"}}}


id: GO:0097313
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external part of the biofilm matrix, a structure lying external to bacterial cells. A biofilm is an aggregate of surface-associated bacteria, and the biofilm matrix is the envelope of polymeric substances that surrounds the bacteria.","definition_xrefs":["PMID:22571672","GOC:imk","Wikipedia:Biofilm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial biofilm matrix","termid":"GO:0097311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial biofilm matrix surface","termid":"GO:0097313"}


id: GO:2000889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellodextrin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellodextrin metabolic process","synonyms":[{"name":"cellodextrin metabolism","type":"exact"}],"termid":"GO:2000889"}


id: GO:1905309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cohesin loading.","definition_xrefs":["PMID:26687354","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cohesin loading (obsolete GO:1905309)","synonyms":[{"name":"positive regulation of cohesin association with chromatin","type":"exact"},{"name":"positive regulation of cohesin localization to chromatin","type":"exact"}],"termid":"GO:1905309"}


id: PBO:0042385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300a molecule","termid":"PBO:0042385"}


id: MONDO:0013433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary sclerosing cholangitis (PSC) is a rare, slowly progressive liver disease characterized by inflammation and destruction of the intra- and/or extra-hepatic bile ducts that lead to cholestasis, liver fibrosis, liver cirrhosis and ultimately liver failure.","definition_xrefs":["Orphanet:171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"primary sclerosing cholangitis","secondary_identifiers":["NANDO:1200440","NORD:1613","GARD:1280","icd11.foundation:857962451","UMLS:C0566602","SCTID:197441003","NANDO:2100265","MedDRA:10036732","OMIM:613806","DOID:0060643","MEDGEN:107565"],"synonyms":[{"name":"PSC","type":"exact"},{"name":"cholangitis, primary sclerosing","type":"related"}],"termid":"MONDO:0013433","xrefs":{"Monarch":{"xref_id":"0013433"}}}


id: GO:0048833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the number of floral organs formed in a floral whorl.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of plant organ number","termid":"GO:0048832"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of floral organ number","termid":"GO:0048833"}


id: MONDO:1011531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperadrenocorticism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperadrenocorticism, non-human animal","termid":"MONDO:1011403"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperadrenocorticism, domestic cat","secondary_identifiers":["OMIA:000494-9685"],"termid":"MONDO:1011531","xrefs":{"Monarch":{"xref_id":"1011531"}}}


id: MONDO:0009417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of hypergonadotropic hypogonadism and cataracts with onset during adolescence. It has been described in three brothers from a consanguineous family.","definition_xrefs":["Orphanet:2410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypergonadotropic hypogonadism-cataract syndrome","secondary_identifiers":["MEDGEN:344596","GARD:298","MESH:C543092","UMLS:C1855859","OMIM:240950","SCTID:721233005"],"synonyms":[{"name":"Lubinsky syndrome","type":"exact"},{"name":"cataracts and testicular failure","type":"related"},{"name":"hypogonadism cataract syndrome","type":"related"},{"name":"hypogonadism-cataract syndrome","type":"related"}],"termid":"MONDO:0009417","xrefs":{"Monarch":{"xref_id":"0009417"}}}


id: PBO:0090083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn5","termid":"PBO:0090083"}


id: GO:0031688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A2B adenosine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"A2B adenosine receptor binding","synonyms":[{"name":"A2B adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031688"}


id: MOD:01195
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:12777388","Unimod:136#K","PubMed:11813307","PubMed:15456300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzoyl labeling reagent light form (N-term and K)","termid":"MOD:00505"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzoyl labeling reagent light form - site K","synonyms":[{"name":"Benzoyl","type":"related"},{"name":"labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:01195"}


id: PBO:0063750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 15","termid":"PBO:0063750"}


id: PBO:0077876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 3","termid":"PBO:0077876"}


id: MOD:01814
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links a cysteine and two serine residues to form L-cysteine 3-hydroxy-2,5-pyridinedicarboxylic acid.","definition_xrefs":["RESID:AA0540","PubMed:893891","PubMed:19678698","PubMed:18406324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine 3-hydroxy-2,5-pyridinedicarboxylic acid","synonyms":[{"name":"6-[(1R)-1-amino-2-sulfanylethyl]-3-hydroxypyridine-2,5-dicarboxylic acid","type":"exact"},{"name":"6-[1-azanyl-2-sulfanylethyl]-3-hydroxypyridine-2,5-dicarboxylic acid","type":"exact"},{"name":"CROSSLNK 3-hydroxypyridine-2,5-dicarboxylic acid (Ser-Cys)","type":"related"},{"name":"L-cysteine 3-hydroxy-2,5-pyridinedicarboxylic acid","type":"exact"}],"termid":"MOD:01814"}


id: MONDO:0005966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the spleen","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system cancer","termid":"MONDO:0000612"},{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"spleen neoplasm","termid":"MONDO:0036696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"spleen cancer","secondary_identifiers":["ICD10CM:C26.1","EFO:0007491","MESH:D013160","MEDGEN:102271","DOID:672","NCIT:C3539","SCTID:127230005","UMLS:C0153470","NCIT:C3383"],"synonyms":[{"name":"cancer of spleen","type":"exact"},{"name":"cancer of the spleen","type":"exact"},{"name":"malignant neoplasm of spleen","type":"exact"},{"name":"malignant neoplasm of the spleen","type":"exact"},{"name":"malignant spleen neoplasm","type":"exact"},{"name":"malignant splenic neoplasm","type":"exact"},{"name":"malignant splenic tumor","type":"exact"},{"name":"malignant splenic tumour","type":"exact"},{"name":"malignant tumor of spleen","type":"exact"},{"name":"malignant tumor of the spleen","type":"exact"},{"name":"malignant tumour of spleen","type":"exact"},{"name":"malignant tumour of the spleen","type":"exact"},{"name":"spleen cancer","type":"exact"},{"name":"spleen neoplasm","type":"broad"},{"name":"splenic cancer","type":"exact"},{"name":"splenic neoplasm","type":"broad"}],"termid":"MONDO:0005966","xrefs":{"Monarch":{"xref_id":"0005966"}}}


id: PBO:0054018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1348","termid":"PBO:0054018"}


id: GO:0008058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the ocellus.","direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule organization","termid":"GO:0048753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus pigment granule organization","synonyms":[{"name":"ocellus pigment granule organisation","type":"exact"},{"name":"ocellus pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0008058"}


id: PBO:0051585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 receptor 1","termid":"PBO:0051585"}


id: PBO:0091954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf13","termid":"PBO:0091954"}


id: GO:0001539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to movement of eukaryotic cilia or bacterial-type flagella or archaeal-type flagella.","definition_xrefs":["GOC:hjd","GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium or flagellum-dependent cell motility","synonyms":[{"name":"ciliary or bacterial-type flagellar motility","type":"related"},{"name":"ciliary/flagellar motility","type":"exact"}],"termid":"GO:0001539"}


id: PBO:0070579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 45","termid":"PBO:0070579"}


id: PR:P0CT59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2202 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S22-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.01","synonyms":[{"name":"Spom972h-rps2202","type":"exact"}],"termid":"PR:P0CT59"}


id: GO:0052802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitroimidazoles, imidazole derivatives with a nitro group attached to one ring.","definition_xrefs":["PMID:19039139","PMID:16387854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitroimidazole metabolic process","synonyms":[{"name":"nitroimidazole metabolism","type":"exact"}],"termid":"GO:0052802"}


id: PBO:0063472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 2","termid":"PBO:0063472"}


id: GO:0102982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + NAD = H+ + UDP-3-keto-alpha-D-glucose + NADH.","definition_xrefs":["GOC:pz","PMID:11278540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"UDP-3-dehydro-alpha-D-glucose dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-9578","RHEA:35755"],"termid":"GO:0102982"}


id: PBO:0069517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 786, pseudogene","termid":"PBO:0069517"}


id: GO:1905886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any chromatin remodeling that is involved in meiosis I.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:9106659","PMID:25934010","PMID:19139281"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin remodeling involved in meiosis I (obsolete GO:1905886)","synonyms":[{"name":"chromatin modeling involved in meiosis I","type":"exact"},{"name":"chromatin modelling involved in meiosis I","type":"exact"},{"name":"chromatin remodelling involved in meiosis I","type":"exact"},{"name":"meiosis-specific chromatin remodeling","type":"exact"}],"termid":"GO:1905886"}


id: GO:0102718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: TRIBOA-beta-D-glucoside + S-adenosyl-L-methionine = (2R)-DIMBOA glucoside + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"TRIBOA-glucoside methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-6687","RHEA:32099"],"termid":"GO:0102718"}


id: GO:0009915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of loading sucrose into the sieve tube or companion cell of the phloem for long distance transport from source to sink.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transport","termid":"GO:0015770"},{"relation_name":"is_a","term_name":"phloem loading","termid":"GO:0110126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phloem sucrose loading","termid":"GO:0009915"}


id: MONDO:0020172
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the skin of eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid neoplasm","termid":"MONDO:0002235"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"palpebral epidermal tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1290083","MEDGEN:712469","Orphanet:98581","SCTID:126499002"],"synonyms":[{"name":"neoplasm of skin of eyelid","type":"exact"},{"name":"skin of eyelid neoplasm","type":"exact"},{"name":"skin of eyelid neoplasm (disease)","type":"exact"},{"name":"skin of eyelid tumor","type":"exact"},{"name":"skin of eyelid tumour","type":"exact"},{"name":"tumor of skin of eyelid","type":"exact"},{"name":"tumour of skin of eyelid","type":"exact"}],"termid":"MONDO:0020172","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0020172"}}}


id: MONDO:0007892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lenz-Majewski hyperostotic dwarfism is an extremely rare syndrome associating dwarfism, characteristic facial appearance, cutis laxa and progressive bone sclerosis.","definition_xrefs":["Orphanet:2658"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lenz-Majewski hyperostotic dwarfism","secondary_identifiers":["icd11.foundation:1509425242","MEDGEN:98483","GARD:3223","MESH:C537115","UMLS:C0432269","OMIM:151050","DOID:0111507"],"synonyms":[{"name":"LMHD","type":"related"},{"name":"Lenz Majewski hyperostotic dwarfism","type":"related"},{"name":"Lenz-Majewski hyperostotic dwarfism","type":"exact"},{"name":"Lenz-Majewski hyperostotic dysplasia","type":"related"},{"name":"Lenz-Majewski syndrome","type":"related"},{"name":"hyperostotic dwarfism Lenz-Majewski type","type":"related"},{"name":"multiple congenital anomalies, intellectual disability and progressive skeletal sclerosis","type":"related"},{"name":"multiple congenital anomalies, mental retardation and progressive skeletal sclerosis","type":"related"}],"termid":"MONDO:0007892","xrefs":{"Monarch":{"xref_id":"0007892"}}}


id: PBO:0059133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 10","termid":"PBO:0059133"}


id: SO:0001092
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with metal ions.","definition_xrefs":["SO:cb","UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal_binding_site","termid":"SO:0001656"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_metal_contact","secondary_identifiers":["BS:00027"],"synonyms":[{"name":"metal_binding","type":"related"}],"termid":"SO:0001092"}


id: PBO:0085662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in negative regulation of transcription; required for RNA polyadenylation; exhibits regulated interactions with both histones and SWI-SNF components; relocalizes to the cytosol in response to hypoxia; similar to mammalian HMG1 proteins","termid":"PBO:0085662"}


id: PBO:0008884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi","termid":"PBO:0008884"}


id: MONDO:0003522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent delay or absence in orgasm not accounted for by a medical reason.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"orgasm disorder","termid":"MONDO:0040674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male orgasm disorder","secondary_identifiers":["DOID:5576","ICD10CM:F52.32","UMLS:C0033949","MEDGEN:19560","SCTID:81903006","NCIT:C34959"],"synonyms":[{"name":"inhibited male orgasm","type":"exact"},{"name":"male orgasmic disorder","type":"exact"}],"termid":"MONDO:0003522","xrefs":{"Monarch":{"xref_id":"0003522"}}}


id: GO:0031456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine betaine, N-trimethylglycine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"glycine betaine metabolic process","termid":"GO:0031455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine biosynthetic process","synonyms":[{"name":"N-trimethylglycine biosynthesis","type":"exact"},{"name":"N-trimethylglycine biosynthetic process","type":"exact"},{"name":"glycine betaine anabolism","type":"exact"},{"name":"glycine betaine biosynthesis","type":"exact"},{"name":"glycine betaine formation","type":"exact"},{"name":"glycine betaine synthesis","type":"exact"}],"termid":"GO:0031456"}


id: PR:Q10239
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.Z-specific chaperone chz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.06c","synonyms":[{"name":"Spom972h-chz1","type":"exact"}],"termid":"PR:Q10239"}


id: MONDO:0013199
data:
  {"annotated_genes":["SJAG_00289","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86788,86789],"is_not":false,"summary":null,"term":"MONDO:0013199"}]},"cv_name":"mondo","definition":"Tuberous sclerosis mapped to chromosome 16p13.3 (TSC2 gene).","definition_xrefs":["NCIT:C75331"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete tuberous sclerosis complex (obsolete MONDO:0019341)","termid":"MONDO:0019341"},{"relation_name":"is_a","term_name":"tuberous sclerosis","termid":"MONDO:0001734"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"tuberous sclerosis 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080325","OMIM:613254","GARD:15640","MESH:C566021","UMLS:C1860707","MEDGEN:348170"],"synonyms":[{"name":"TSC2","type":"related"},{"name":"TSC2 Angiomyolipomas, renal, modifier of","type":"related"},{"name":"tuberous sclerosis 2","type":"exact"},{"name":"tuberous sclerosis type 2","type":"exact"},{"name":"tuberous sclerosis, type 2","type":"related"},{"name":"tuberous sclerosis-2","type":"exact"}],"termid":"MONDO:0013199","terms_by_termid":{"MONDO:0013199":null},"xrefs":{"Monarch":{"xref_id":"0013199"}}}


id: PBO:0075712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 1","termid":"PBO:0075712"}


id: MONDO:0006497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders affecting the development of movement and posture, often accompanied by disturbances of sensation, perception, cognition, and behavior. It results from damage to the fetal or infant brain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"},{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral palsy","secondary_identifiers":["NCIT:C34460","CSP:0723-4729","ICD9:343.9","ICD9:343.8","ICD10CM:G80","MEDGEN:854","MESH:D002547","EFO:1000632","HP:0100021","icd11.foundation:76906748","SCTID:128188000","UMLS:C0007789","DOID:1969"],"synonyms":[{"name":"infantile cerebral palsy","type":"exact"}],"termid":"MONDO:0006497","xrefs":{"Monarch":{"xref_id":"0006497"}}}


id: FYPO:0006172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short mitotic spindle assembles and elongates during prophase, but does not elongate further during anaphase B and eventually collapses.","definition_xrefs":["PMID:25375240","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished mitotic spindle elongation during anaphase B","termid":"FYPO:0006174"},{"relation_name":"is_a","term_name":"abolished mitotic spindle elongation during anaphase B","termid":"FYPO:0006174"},{"relation_name":"is_a","term_name":"mitotic spindle collapse","termid":"FYPO:0006475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"has_part","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000337","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"mitotic spindle collapse without elongation during anaphase B","synonyms":[{"name":"broken mitotic spindle without elongation during anaphase B","type":"related"},{"name":"mitotic spindle breakage without elongation during anaphase B","type":"exact"},{"name":"mitotic spindle collapse without elongation during anaphase B during vegetative growth","type":"exact"},{"name":"mitotic spindle collapse without extension during anaphase B","type":"exact"},{"name":"spindle collapse without elongation during anaphase B during mitotic cell cycle","type":"related"},{"name":"spindle collapse without elongation during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0006172"}


id: MONDO:0020736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"uncombable hair syndrome","termid":"MONDO:0008621"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncombable hair syndrome 1","secondary_identifiers":["GARD:15122","MEDGEN:1640179","UMLS:C4551573","OMIM:191480"],"synonyms":[{"name":"UHS1","type":"related"},{"name":"pili trianguli Et canaliculi","type":"related"},{"name":"uncombable hair syndrome","type":"related"},{"name":"uncombable hair syndrome 1","type":"exact"}],"termid":"MONDO:0020736","xrefs":{"Monarch":{"xref_id":"0020736"}}}


id: PBO:0004069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin Dnm1","termid":"PBO:0004069"}


id: PBO:0068033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 338","termid":"PBO:0068033"}


id: GO:0140844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ADP-ribose groups to the glutamate-2 residue of the N-terminal tail of histone H2B (or an equivalent residue).","definition_xrefs":["PMID:27530147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein-glutamate ADP-ribosyltransferase activity","termid":"GO:0140807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NAD+-histone H2BE2 glutamate ADP-ribosyltransferase activity","synonyms":[{"name":"NAD+-histone H2B-E2 glutamate ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+-histone-glutamate ADP-ribosyltransferase activity (H2B-E2 specific)","type":"exact"}],"termid":"GO:0140844"}


id: GO:0014076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoxetine stimulus. Fluoxetine increases the extracellular level of the neurotransmitter serotonin by inhibiting its reuptake into the presynaptic cell, increasing the level of serotonin available to bind to the postsynaptic receptor.","definition_xrefs":["GOC:pr","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antidepressant","termid":"GO:0036276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fluoxetine","synonyms":[{"name":"response to SSRI","type":"related"},{"name":"response to selective serotonin reuptake inhibitor","type":"related"}],"termid":"GO:0014076"}


id: PBO:0011425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 complex phosphatidylinositol pseudokinase complex subunit Tra2","termid":"PBO:0011425"}


id: PBO:0046357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 15","termid":"PBO:0046357"}


id: PBO:0079617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L2 (pseudogene)","termid":"PBO:0079617"}


id: MONDO:0010578
data:
  {"annotated_genes":["SJAG_02524"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85397],"is_not":false,"summary":null,"term":"MONDO:0010578"}]},"cv_name":"mondo","definition":"An X-linked recessive neurodegenerative syndrome characterized by clinical manifestations commencing with early childhood onset hearing loss, followed by adolescent onset progressive dystonia or ataxia, visual impairment from early adulthood onwards and dementia from the 4th decade onwards.","definition_xrefs":["Orphanet:52368"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mitochondrial protein import disorder","termid":"MONDO:0016802"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"deafness dystonia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8331","MESH:C535808","OMIM:304700","UMLS:C0796074","ICD9:759.89","DOID:0050757","SCTID:702423009","MEDGEN:162903"],"synonyms":[{"name":"DDON syndrome","type":"exact"},{"name":"DDP","type":"related"},{"name":"MOHR-Tranebjaerg syndrome","type":"related"},{"name":"MTS","type":"related"},{"name":"Mohr-Tranebjaerg syndrome","type":"exact"},{"name":"Mohr-Tranebjaerg syndrome, X-linked recessive","type":"exact"},{"name":"deafness - dystonia - optic neuronopathy syndrome","type":"related"},{"name":"deafness dystonia optic atrophy syndrome","type":"exact"},{"name":"deafness dystonia optic neuronopathy syndrome","type":"exact"},{"name":"deafness dystonia optic neuronopathy syndrome (DDON)","type":"exact"},{"name":"deafness dystonia syndrome","type":"exact"},{"name":"deafness syndrome, progressive, with blindness, dystonia, fractures, and mental deficiency","type":"related"},{"name":"deafness-Dystonia-optic atrophy syndrome","type":"related"},{"name":"deafness-dystonia-optic neuronopathy (DDON) syndrome","type":"related"},{"name":"deafness-dystonia-optic neuronopathy syndrome","type":"exact"},{"name":"dystonia deafness syndrome","type":"exact"},{"name":"dystonia-deafness syndrome","type":"related"}],"termid":"MONDO:0010578","terms_by_termid":{"MONDO:0010578":null},"xrefs":{"Monarch":{"xref_id":"0010578"}}}


id: MONDO:0007307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sensorineural peripheral polyneuropathy affecting approximately 1 in 2,500 individuals, and is the most common inherited disorder of the peripheral nervous system. Autosomal dominant, autosomal recessive, and X-linked forms have been recognized.","definition_xrefs":["OMIM:118200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease dominant intermediate D","termid":"MONDO:0011909"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1B","secondary_identifiers":["DOID:0110152","GARD:1246","icd11.foundation:1632280319","MEDGEN:124377","NCIT:C118782","Orphanet:101082","UMLS:C0270912"],"synonyms":[{"name":"CMT 1B","type":"related"},{"name":"CMT1B","type":"exact"},{"name":"Charcot Marie Tooth disease type 1B","type":"related"},{"name":"Charcot-Marie-Tooth disease slow nerve conduction type linked to Duffy","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 1 caused by mutation in MPZ","type":"exact"},{"name":"Charcot-Marie-Tooth disease, autosomal dominant, with focally folded myelin sheaths, type 1B","type":"related"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1B","type":"related"},{"name":"Charcot-Marie-Tooth disease, slow nerve conduction type, linked to Duffy","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1B","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1B","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1B","type":"related"},{"name":"HMSN 1B","type":"related"},{"name":"HMSN IB","type":"exact"},{"name":"HMSN1","type":"related"},{"name":"HMSN1B","type":"exact"},{"name":"MPZ Charcot-Marie-Tooth disease type 1","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease with focally folded myelin sheaths type 1B","type":"exact"},{"name":"hereditary motor and sensory neuropathy 1","type":"related"},{"name":"hereditary motor and sensory neuropathy 1B","type":"related"},{"name":"hereditary motor and sensory neuropathy IB","type":"exact"}],"termid":"MONDO:0007307","xrefs":{"Monarch":{"xref_id":"0007307"}}}


id: PBO:0052478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 4","termid":"PBO:0052478"}


id: PBO:0062596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 6 pseudogene","termid":"PBO:0062596"}


id: FYPO:0002279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that is curved along the long axis, and undergoes a single round of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division, with elongated germ tube","termid":"FYPO:0002409"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, with elongated, curved germ tube","synonyms":[{"name":"inviable after spore germination, single cell division, elongated, curved cell","type":"exact"},{"name":"inviable following spore germination, single cell division, with elongated, curved germ tube","type":"exact"},{"name":"inviable germinated spore, single cell division, with elongated, curved germ tube","type":"exact"},{"name":"lethal after spore germination, single cell division, with elongated, curved germ tube","type":"exact"}],"termid":"FYPO:0002279"}


id: PBO:0045912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 8","termid":"PBO:0045912"}


id: PBO:0058704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6832","termid":"PBO:0058704"}


id: MONDO:0017386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant mesenchymal neoplasm with skeletal muscle differentiation, occurring in adults and rarely in children. The tumor is characterized by the presence of bizarre round, spindle, and polygonal cells. Clinical presentation includes a rapidly enlarging painful mass usually of the lower extremities.","definition_xrefs":["NCIT:C4258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleomorphic rhabdomyosarcoma","secondary_identifiers":["ONCOTREE:PLRMS","UMLS:C0334480","SCTID:404054005","Orphanet:293199","ICD9:171.9","DOID:3250","MEDGEN:137770","GARD:21165"],"synonyms":[{"name":"anaplastic rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic rhabdomyosarcoma, adult type","type":"exact"}],"termid":"MONDO:0017386","xrefs":{"Monarch":{"xref_id":"0017386"}}}


id: GO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by polyamination.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein polyamination","synonyms":[{"name":"protein amino acid polyamination","type":"exact"}],"termid":"GO:0018184"}


id: MONDO:0042488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with true tapeworms of the helminth subclass Cestoda.","definition_xrefs":["MESH:D002590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cestode infectious disease","secondary_identifiers":["ICD9:123.8","ICD9:123.9","SCTID:86133004"],"synonyms":[{"name":"Bertielliases","type":"related"},{"name":"Bertielliasis","type":"related"},{"name":"Cenuriases","type":"related"},{"name":"Cenuriasis","type":"related"},{"name":"Cestoda caused disease or disorder","type":"exact"},{"name":"Cestoda disease or disorder","type":"exact"},{"name":"Cestoda infectious disease","type":"exact"},{"name":"Cestodiasis","type":"related"},{"name":"Cestodosis","type":"related"},{"name":"Coenuriases","type":"related"},{"name":"Coenuriasis","type":"related"},{"name":"Dipylidiases","type":"related"},{"name":"Dipylidiasis","type":"related"},{"name":"Raillietiniases","type":"related"},{"name":"Raillietiniasis","type":"related"},{"name":"cestode infection","type":"exact"},{"name":"cestode infestation","type":"related"},{"name":"disease due to Cestoda","type":"related"},{"name":"infection, cestode","type":"related"},{"name":"infection, tapeworm","type":"related"},{"name":"infections, cestode","type":"related"},{"name":"infections, tapeworm","type":"related"},{"name":"tapeworm infection","type":"related"},{"name":"tapeworm infections","type":"related"}],"termid":"MONDO:0042488","xrefs":{"Monarch":{"xref_id":"0042488"}}}


id: PBO:0032749
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METhionine requiring","termid":"PBO:0032749"}


id: MONDO:0009937
data:
  {"annotated_genes":["SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009329"}]},"cv_name":"mondo","definition":"A disorder characterized by pulmonary venous constriction or occlusion, resulting in pulmonary hypertension.","definition_xrefs":["NCIT:C85039"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pulmonary veno-occlusive disease and/or pulmonary capillary haemangiomatosis","termid":"MONDO:0018554"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00169":null},"genotype_count":0,"is_obsolete":false,"name":"pulmonary venoocclusive disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10153","ICD9:416.8","MESH:D011668","UMLS:C0034091","MedDRA:10037458","MEDGEN:18769","DOID:5453","Orphanet:31837","OMIMPS:265450","NANDO:1200427","SCTID:89420002"],"synonyms":[{"name":"PVOD","type":"exact"},{"name":"obstructive disease of the pulmonary veins","type":"related"},{"name":"pulmonary capillary hemangiomatosis","type":"exact"},{"name":"pulmonary veno-occlusive disease","type":"exact"}],"termid":"MONDO:0009937","terms_by_termid":{"MONDO:0009329":null},"xrefs":{"Monarch":{"xref_id":"0009937"}}}


id: PR:O13686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 59 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02195","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RWD, RING finger and WD repeat-containing protein C11E3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.05","secondary_identifiers":["UniProtKB:O13686"],"synonyms":[{"name":"Spom972h-WDR59","type":"exact"}],"termid":"PR:O13686"}


id: GO:0051098
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95615,105476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051098","terms_by_termid":{"GO:1904530":null}}


id: MONDO:0032883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with behavioral abnormalities and craniofacial dysmorphism with or without seizures","secondary_identifiers":["OMIM:618725","MEDGEN:1684850","UMLS:C5231476"],"synonyms":[{"name":"IDDBCS","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH BEHAVIORAL ABNORMALITIES AND CRANIOFACIAL DYSMORPHISM WITH OR WITHOUT SEIZURES","type":"related"}],"termid":"MONDO:0032883","xrefs":{"Monarch":{"xref_id":"0032883"}}}


id: PBO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament light chain","termid":"PBO:0060841"}


id: MONDO:0006994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tarsal tunnel syndrome is a nerve disorder that is characterized by pain in the ankle, foot, and toes. This condition is caused by compression of the posterior tibial nerve, which runs through a canal near the heel into the sole of the foot. When tissues around this nerve become inflamed, they can press on the nerve and cause the pain associated with tarsal tunnel syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"tibial neuropathy","termid":"MONDO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"tarsal tunnel syndrome","secondary_identifiers":["SCTID:47374004","UMLS:C0039319","ICD9:355.5","MEDGEN:52646","EFO:1001208","GARD:7733","ICD10CM:G57.5","DOID:12526","icd11.foundation:854657246","MESH:D013641","NCIT:C85183","MedDRA:10043121"],"synonyms":[{"name":"neuropathy of the posterior tibial nerve and its branches","type":"related"},{"name":"posterior tibial nerve neuralgia","type":"related"}],"termid":"MONDO:0006994","xrefs":{"Monarch":{"xref_id":"0006994"}}}


id: MONDO:0021364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neoplasm of oropharynx","secondary_identifiers":["SCTID:126809003","NCIT:C3291","UMLS:C0029295","MEDGEN:14519"],"synonyms":[{"name":"neoplasm of oropharynx","type":"exact"},{"name":"neoplasm of the oropharynx","type":"exact"},{"name":"oropharyngeal neoplasm","type":"exact"},{"name":"oropharyngeal neoplasms","type":"exact"},{"name":"oropharyngeal tumor","type":"exact"},{"name":"oropharyngeal tumour","type":"exact"},{"name":"oropharynx neoplasm","type":"exact"},{"name":"oropharynx neoplasm (disease)","type":"exact"},{"name":"oropharynx tumor","type":"exact"},{"name":"oropharynx tumour","type":"exact"},{"name":"tumor of oropharynx","type":"exact"},{"name":"tumor of the oropharynx","type":"exact"},{"name":"tumour of oropharynx","type":"exact"},{"name":"tumour of the oropharynx","type":"exact"}],"termid":"MONDO:0021364","xrefs":{"Monarch":{"xref_id":"0021364"}}}


id: GO:0043678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The innermost of the major layers of the pollen grain wall which underlies the exine and borders the cytoplasm.","definition_xrefs":["PMID:33706055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pollen wall","termid":"GO:0043667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intine","termid":"GO:0043678"}


id: PBO:0031740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mating_type_switching","termid":"PBO:0031740"}


id: MONDO:0008557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paris-Trousseau thrombocytopenia (TCPT) is a contiguous gene syndrome characterized by mild bleeding tendency, variable thrombocytopenia (THC), dysmorphic facies, abnormal giant alpha-granules in platelets and dysmegakaryopoiesis.","definition_xrefs":["Orphanet:851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 11","termid":"MONDO:0016910"},{"relation_name":"is_a","term_name":"alpha granule disease","termid":"MONDO:0020117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Paris-Trousseau thrombocytopenia","secondary_identifiers":["GARD:4224","OMIM:188025","UMLS:C1956093","MEDGEN:365037","icd11.foundation:1441183910"],"synonyms":[{"name":"Paris-Trousseau syndrome","type":"related"},{"name":"TCPT","type":"related"},{"name":"chromosome 11q23 deletion syndrome","type":"related"},{"name":"thrombocytopenia Paris-Trousseau type","type":"related"},{"name":"thrombocytopenia, Paris-TROUSSEAU type","type":"related"},{"name":"thrombocytopenia, Paris-Trousseau type, Isolated cases","type":"exact"}],"termid":"MONDO:0008557","xrefs":{"Monarch":{"xref_id":"0008557"}}}


id: GO:1903552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extracellular vesicular exosome assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24105262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"regulation of extracellular exosome assembly","termid":"GO:1903551"},{"relation_name":"negatively_regulates","term_name":"extracellular exosome assembly","termid":"GO:0071971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular exosome assembly","synonyms":[{"name":"down regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"down-regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"downregulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"inhibition of extracellular vesicular exosome assembly","type":"narrow"},{"name":"negative regulation of extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:1903552"}


id: GO:0052417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving protein macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont protein (obsolete GO:0052417)","termid":"GO:0052417"}


id: FYPO:0000688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","termid":"FYPO:0000687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","synonyms":[{"name":"reduced peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","type":"exact"}],"termid":"FYPO:0000688"}


id: GO:0089721
data:
  {"annotated_genes":["SJAG_00276","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76931,93669],"is_not":false,"summary":null,"term":"GO:0089721"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a phosphoenolpyruvate from one side of a membrane to the other.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0089721","terms_by_termid":{"GO:0089721":null}}


id: PBO:0066220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 25","termid":"PBO:0066220"}


id: MONDO:0014060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"progressive retinal dystrophy due to retinol transport defect","secondary_identifiers":["GARD:17529","ICD10CM:H35.5","OMIM:615147","Orphanet:352718","MEDGEN:767507","UMLS:C3554593"],"synonyms":[{"name":"RDCCAS","type":"related"},{"name":"retinal dystrophy, iris coloboma, and comedogenic acne syndrome","type":"related"},{"name":"retinol dystrophy-iris coloboma-comedogenic acne syndrome","type":"exact"}],"termid":"MONDO:0014060","xrefs":{"Monarch":{"xref_id":"0014060"}}}


id: MONDO:1011934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamic laryngeal collapse, non-human animal","secondary_identifiers":["OMIA:002417"],"termid":"MONDO:1011934","xrefs":{"Monarch":{"xref_id":"1011934"}}}


id: PBO:0084550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; active during alcoholic fermentation, regulated by anaerobiosis, inhibited by oxygen, repressed by heme","termid":"PBO:0084550"}


id: GO:0019675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition or removal of a phosphate group from nicotinamide adenine dinucleotide (NAD), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["ISBN:0618254153","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD phosphorylation and dephosphorylation (obsolete GO:0019675)","synonyms":[{"name":"NAD phosphorylation and dephosphorylation","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphorylation and dephosphorylation","type":"exact"}],"termid":"GO:0019675"}


id: PBO:0054751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2161","termid":"PBO:0054751"}


id: GO:0034115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of heterotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of heterotypic cell-cell adhesion","termid":"GO:0034114"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion involved in gastrulation","termid":"GO:0070587"},{"relation_name":"negatively_regulates","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of heterotypic cell-cell adhesion","termid":"GO:0034115"}


id: GO:0016618
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75501,75611],"is_not":false,"summary":null,"term":"GO:0016618"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NAD(P)+ = 3-hydroxypyruvate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxypyruvate reductase [NAD(P)H] activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:HYDROXYPYRUVATE-REDUCTASE-RXN"],"synonyms":[{"name":"D-glycerate dehydrogenase activity","type":"related"},{"name":"D-glycerate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"NADH:hydroxypyruvate reductase activity","type":"related"},{"name":"beta-hydroxypyruvate reductase activity","type":"related"},{"name":"hydroxypyruvate reductase activity","type":"broad"}],"termid":"GO:0016618","terms_by_termid":{"GO:0016618":null}}


id: MONDO:1012603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in cats in which there is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000403-9685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, domestic cat","termid":"MONDO:1010841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, domestic cat","synonyms":[{"name":"gangliosidosis, GM2, generic, domestic cat","type":"related"}],"termid":"MONDO:1012603","xrefs":{"Monarch":{"xref_id":"1012603"}}}


id: MONDO:0013791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary thrombophilia due to congenital protein S deficiency","termid":"MONDO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia due to protein S deficiency, autosomal recessive","secondary_identifiers":["OMIM:614514","MEDGEN:482722","UMLS:C3281092","GARD:18569"],"synonyms":[{"name":"THPH6","type":"related"},{"name":"thrombophilia 5 due to protein S deficiency, autosomal recessive","type":"exact"},{"name":"thrombophilia due to PROTEIN S deficiency, autosomal recessive","type":"related"},{"name":"thrombophilia due to protein S deficiency, autosomal recessive","type":"exact"}],"termid":"MONDO:0013791","xrefs":{"Monarch":{"xref_id":"0013791"}}}


id: PBO:0039064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGK pseudogene 1","termid":"PBO:0039064"}


id: PBO:0051265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (IV)-44-1 (pseudogene)","termid":"PBO:0051265"}


id: GO:0071691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the actin-based thin filaments of myofibrils in cardiac muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"part_of","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cardiac muscle thin filament assembly","termid":"GO:0071691"}


id: GO:0048398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an intermediate mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell fate commitment","termid":"GO:0048393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate specification","synonyms":[{"name":"intermediate mesoderm cell fate specification","type":"exact"}],"termid":"GO:0048398"}


id: PATO:0000345
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A compatibility quality inhering in a bearer by virtue of the bearer's being incapable of harmonious coexistence.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compatibility","termid":"PATO:0000021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incompatible","termid":"PATO:0000345"}


id: PBO:0090154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family Rrp1","termid":"PBO:0090154"}


id: GO:0097671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is YDR131C in S. cerevisiae.","definition_xrefs":["GOC:vw","PMID:14747994","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-YDR131C ubiquitin ligase complex","termid":"GO:0097671"}


id: GO:0004441
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115875],"is_not":false,"summary":null,"term":"GO:0004441"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4-bisphosphate + H2O = 1D-myo-inositol 4-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.57","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisphosphate phosphatase activity","termid":"GO:0016312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"inositol-1,4-bisphosphate 1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.3.57-RXN","Reactome:R-HSA-1855208","RHEA:15553"],"synonyms":[{"name":"1D-myo-inositol-1,4-bisphosphate 1-phosphohydrolase activity","type":"related"},{"name":"inositol polyphosphate 1-phosphatase activity","type":"broad"},{"name":"inositol-polyphosphate 1-phosphatase activity","type":"related"}],"termid":"GO:0004441","terms_by_termid":{"GO:0004441":null}}


id: MONDO:0022509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Asternia, also known as a complete congenital sternal cleft, is a condition in which a bone called thesternum does not form properly.The sternumusuallyconnects to the ribs to form the ribcage. Individuals with asternia are missing this bone and may appear to have a rut or trench under the skin in the middle of the chest. Most individuals with asternia have no symptoms, though some may have difficulty breathing. Asternia is sometimes associated with other conditions, such as heart problems. The cause of asternia is currently unknown. Treatment consists of surgery to close the gap between the ribs.","definition_xrefs":["GARD:0009221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asternia","secondary_identifiers":["MEDGEN:869485","UMLS:C4023912"],"synonyms":[{"name":"absent sternum","type":"related"}],"termid":"MONDO:0022509","xrefs":{"Monarch":{"xref_id":"0022509"}}}


id: MONDO:0019752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pediatric Castleman disease (PCD) is a form of Castleman disease (CD) with a predominant occurrence in teenagers which is either asymptomatic or manifest by systemic (such as fever, anemia, fatigue and failure to thrive) or compressive symptoms.","definition_xrefs":["Orphanet:93682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Castleman disease","termid":"MONDO:0015564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pediatric Castleman disease","termid":"MONDO:0019752","xrefs":{"Monarch":{"xref_id":"0019752"}}}


id: PBO:0017781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node Gef2-related protein protein Nod1","termid":"PBO:0017781"}


id: PBO:0067960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 262","termid":"PBO:0067960"}


id: PBO:0004885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Aah4","termid":"PBO:0004885"}


id: GO:0072177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric duct over time, from its initial formation to a mature structure. A mesonephric duct is a tube drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"},{"relation_name":"is_a","term_name":"nephric duct development","termid":"GO:0072176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct development","synonyms":[{"name":"Wolffian duct development","type":"exact"}],"termid":"GO:0072177"}


id: FYPO:0005935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of meiotic recombination is normal (i.e. indistinguishable from wild type). Meiotic recombination is a cellular process in which double strand breaks are formed and repaired through a double Holliday junction intermediate, resulting in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes.","definition_xrefs":["GO:0007131","PomBase:mah","PMID:19470480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic recombination","termid":"FYPO:0000488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic recombination frequency","synonyms":[{"name":"normal occurrence of meiotic recombination","type":"exact"}],"termid":"FYPO:0005935"}


id: MONDO:0014153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the RAB28 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"RAB28-related retinopathy","termid":"MONDO:0100448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 18","secondary_identifiers":["UMLS:C3809299","MEDGEN:815629","DOID:0111024","GARD:15953","OMIM:615374"],"synonyms":[{"name":"CORD18","type":"exact"},{"name":"RAB28 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 18","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in RAB28","type":"exact"},{"name":"cone-rod dystrophy type 18","type":"exact"}],"termid":"MONDO:0014153","xrefs":{"Monarch":{"xref_id":"0014153"}}}


id: PBO:0035984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_hydroxyurea","termid":"PBO:0035984"}


id: PBO:0090648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD E3 ligase adaptor subunit Hrd3","termid":"PBO:0090648"}


id: GO:0070134
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100783],"is_not":false,"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation","termid":"GO:0045948"},{"relation_name":"is_a","term_name":"positive regulation of mitochondrial translation","termid":"GO:0070131"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translational initiation","termid":"GO:0070132"},{"relation_name":"positively_regulates","term_name":"mitochondrial translational initiation","termid":"GO:0070124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mitochondrial translational initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitochondrial translation initiation","type":"exact"}],"termid":"GO:0070134","terms_by_termid":{"GO:0070134":null}}


id: MONDO:0015543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemophagocytic syndrome associated with an infection (obsolete MONDO:0015543)","termid":"MONDO:0015543","xrefs":{"Monarch":{"xref_id":"0015543"}}}


id: GO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein contributing to antigen processing and presentation.","definition_xrefs":["PMID:15771591","ISBN:0781735149","GOC:add","PMID:15224092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}


id: GO:0017074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the N-propeptide of collagen chain alpha-1(I) at Pro-Gln and of alpha-1(II) and alpha-2(I) chains at Ala-Gln.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete procollagen N-endopeptidase activity (obsolete GO:0017074)","synonyms":[{"name":"aminoprocollagen peptidase activity","type":"related"},{"name":"aminoterminal procollagen peptidase activity","type":"related"},{"name":"procollagen N-endopeptidase activity","type":"exact"},{"name":"procollagen N-proteinase activity","type":"related"},{"name":"procollagen N-terminal peptidase activity","type":"related"},{"name":"procollagen N-terminal proteinase activity","type":"related"},{"name":"procollagen aminopeptidase activity","type":"related"},{"name":"procollagen aminoterminal protease activity","type":"related"},{"name":"type I/II procollagen N-proteinase activity","type":"related"},{"name":"type III procollagen","type":"related"}],"termid":"GO:0017074"}


id: GO:2000686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000686)","synonyms":[{"name":"regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000686"}


id: GO:0031020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An mRNA editing complex found in a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA editing complex","termid":"GO:0045293"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid mRNA editing complex","synonyms":[{"name":"plastid editosome","type":"exact"}],"termid":"GO:0031020"}


id: SO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the lysosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"lysosomal_localization_signal","synonyms":[{"name":"lysosomal localization signal","type":"exact"}],"termid":"SO:0001530"}


id: GO:0043133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the hindgut. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The hindgut is the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["UBERON:0001046","GOC:mtg_muscle","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindgut contraction","termid":"GO:0043133"}


id: PBO:0049653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 7","termid":"PBO:0049653"}


id: MOD:01238
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-lysine residue with 4-hydroxynonenal.","definition_xrefs":["Unimod:53#K","PubMed:9629898","PubMed:11327326","PubMed:15133838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"lysine 4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:01238"}


id: GO:0033531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stachyose, the tetrasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"stachyose metabolic process","synonyms":[{"name":"stachyose metabolism","type":"exact"}],"termid":"GO:0033531"}


id: MOD:00926
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from Unimod Non-standard residue. OBSOLETE because not an amino acid modification. From Unimod not an approved entry.","definition_xrefs":["PubMed:11225353","Unimod:493"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00926 Bisphenol A diglycidyl ether derivative (obsolete MOD:00926)","synonyms":[{"name":"BADGE","type":"related"},{"name":"Bisphenol A diglycidyl ether derivative","type":"related"}],"termid":"MOD:00926"}


id: MONDO:1012888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any spinal muscular atrophy that occurs in domestic cats due to a mutation in the LIX1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy, domestic cat","termid":"MONDO:1010996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy, LIX1-related, domestic cat","secondary_identifiers":["OMIA:002389-9685"],"termid":"MONDO:1012888","xrefs":{"Monarch":{"xref_id":"1012888"}}}


id: GO:0050371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + H2O = NH4 + phenol + pyruvate.","definition_xrefs":["EC:4.1.99.2","RHEA:21704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"tyrosine phenol-lyase activity","secondary_identifiers":["KEGG_REACTION:R00728","MetaCyc:TYROSINE-PHENOL-LYASE-RXN"],"synonyms":[{"name":"L-tyrosine phenol-lyase (deaminating)","type":"related"},{"name":"L-tyrosine phenol-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"beta-tyrosinase activity","type":"related"}],"termid":"GO:0050371"}


id: GO:0047755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-threo-isocitrate = D-erythro-isocitrate.","definition_xrefs":["EC:5.1.2.6","RHEA:10820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"isocitrate epimerase activity","secondary_identifiers":["KEGG_REACTION:R02318","MetaCyc:ISOCITRATE-EPIMERASE-RXN"],"synonyms":[{"name":"(1R,2S)-1-hydroxypropane-1,2,3-tricarboxylate 1-epimerase activity","type":"related"}],"termid":"GO:0047755"}


id: PBO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog2 (predicted)","termid":"PBO:0003362"}


id: GO:1901874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of post-translational protein modification.","definition_xrefs":["GOC:TermGenie","PMID:21209915","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of post-translational protein modification","termid":"GO:1901873"},{"relation_name":"negatively_regulates","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-translational protein modification","synonyms":[{"name":"down regulation of PTM","type":"exact"},{"name":"down regulation of post-translational amino acid modification","type":"exact"},{"name":"down regulation of post-translational modification","type":"exact"},{"name":"down regulation of post-translational protein modification","type":"exact"},{"name":"down regulation of posttranslational amino acid modification","type":"exact"},{"name":"down regulation of posttranslational modification","type":"exact"},{"name":"down regulation of posttranslational protein modification","type":"exact"},{"name":"down-regulation of PTM","type":"exact"},{"name":"down-regulation of post-translational amino acid modification","type":"exact"},{"name":"down-regulation of post-translational modification","type":"exact"},{"name":"down-regulation of post-translational protein modification","type":"exact"},{"name":"down-regulation of posttranslational amino acid modification","type":"exact"},{"name":"down-regulation of posttranslational modification","type":"exact"},{"name":"down-regulation of posttranslational protein modification","type":"exact"},{"name":"downregulation of PTM","type":"exact"},{"name":"downregulation of post-translational amino acid modification","type":"exact"},{"name":"downregulation of post-translational modification","type":"exact"},{"name":"downregulation of post-translational protein modification","type":"exact"},{"name":"downregulation of posttranslational amino acid modification","type":"exact"},{"name":"downregulation of posttranslational modification","type":"exact"},{"name":"downregulation of posttranslational protein modification","type":"exact"},{"name":"inhibition of PTM","type":"exact"},{"name":"inhibition of post-translational amino acid modification","type":"exact"},{"name":"inhibition of post-translational modification","type":"exact"},{"name":"inhibition of post-translational protein modification","type":"narrow"},{"name":"inhibition of posttranslational amino acid modification","type":"exact"},{"name":"inhibition of posttranslational modification","type":"exact"},{"name":"inhibition of posttranslational protein modification","type":"exact"},{"name":"negative regulation of PTM","type":"exact"},{"name":"negative regulation of post-translational amino acid modification","type":"exact"},{"name":"negative regulation of post-translational modification","type":"exact"},{"name":"negative regulation of posttranslational amino acid modification","type":"exact"},{"name":"negative regulation of posttranslational modification","type":"exact"},{"name":"negative regulation of posttranslational protein modification","type":"exact"}],"termid":"GO:1901874"}


id: PBO:0082005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 5 pseudogene 1","termid":"PBO:0082005"}


id: PBO:0054872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2286","termid":"PBO:0054872"}


id: GO:0097217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pit-like area in the cell wall of a sieve element; contains pores lined with callose and occupied by strands of protoplasmic material that interconnect the protoplasts of contiguous sieve elements.","definition_xrefs":["ISBN:0471738433","POC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"sieve area","termid":"GO:0097217"}


id: GO:2000584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010642"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:2000583"},{"relation_name":"negatively_regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"negative regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"negative regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"negative regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000584"}


id: GO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of the optic cup. This process pertains to the physical shaping of the rudimentary structure.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup structural organization","synonyms":[{"name":"optic cup structural organisation","type":"exact"}],"termid":"GO:0003409"}


id: PBO:0047762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor 3 pseudogene 1","termid":"PBO:0047762"}


id: GO:0090022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"}


id: GO:0009311
data:
  {"annotated_genes":["SJAG_02131","SJAG_01209","SJAG_00129","SJAG_02949","SJAG_04301","SJAG_01427","SJAG_04859","SJAG_01531","SJAG_00182","SJAG_04363","SJAG_01646","SJAG_01862","SJAG_03824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68244],"is_not":false,"summary":null,"term":"GO:0009311"},{"annotations":[101917,101918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[68262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[77145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[69459,61918,62635,68780,109225,64566,68295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"},{"annotations":[71919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02131":null,"SJAG_02949":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04363":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"oligosaccharide metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0051690"],"synonyms":[{"name":"multicellular organismal oligosaccharide metabolic process","type":"narrow"},{"name":"oligosaccharide metabolism","type":"exact"}],"termid":"GO:0009311","terms_by_termid":{"GO:0000025":null,"GO:0005987":null,"GO:0005992":null,"GO:0005993":null,"GO:0005995":null,"GO:0009311":null}}


id: GO:1903517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single strand break repair.","definition_xrefs":["PMID:17395247","GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"negatively_regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of single strand break repair","synonyms":[{"name":"down regulation of single strand break repair","type":"exact"},{"name":"down-regulation of single strand break repair","type":"exact"},{"name":"downregulation of single strand break repair","type":"exact"},{"name":"inhibition of single strand break repair","type":"narrow"}],"termid":"GO:1903517"}


id: MONDO:0859147
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86842],"is_not":false,"summary":null,"term":"MONDO:0859147"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"Marbach-Rustad progeroid syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:659873","MEDGEN:1784907","OMIM:619322","UMLS:C5543388"],"synonyms":[{"name":"LEMD2-associated nuclear envelopathy with early progeroid appearance","type":"exact"},{"name":"Marbach-Rustad progeroid syndrome","type":"exact"},{"name":"Wormian bones-micrognathia-abnormal dentition-progeroid syndrome","type":"exact"}],"termid":"MONDO:0859147","terms_by_termid":{"MONDO:0859147":null},"xrefs":{"Monarch":{"xref_id":"0859147"}}}


